Pay0019910.1 (mRNA) Melon (Payzawat) v1

Overview


Name	Pay0019910.1
Type	mRNA
Organism	Cucumis melo L. var. inodorus cv. Payzawat (Melon (Payzawat) v1)
Description	outer envelope pore protein 16, chloroplastic
Location	chr12: 2746310 .. 2748960 (+)
Sequence length	1088
RNA-Seq Expression	Pay0019910.1
Synteny	Pay0019910.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GCAACACCAACGGCAAATACTGGCCTCGGGCTGGGCAAACGAAAAAAGTTGGACTCATCTTCTTCTTCAAGAATCCAATCAAATCAAAGATCCAAAAAGCCACTAAAATCCAAATTTATTTCACATTTTAAGTACACTCCAAAAATCTTGAACAATTTGTAGCGGCAAAAATCAGGGACAACCCATTTCTACCACCATCCTCCACTTTCAATCCCTTCTCACACACTATCTCTACAACGACACCATGCCTCGCACCGGCTTCGTCGGCTCCTTATCGACCCCCAAGGTTGATGTCGTCATCGATATGGGTAATCCCTTTCTCAACCTCACCGTCGATGGCTTCTTGAAGATCGGATCCGTATGTGTTTCTTGCCTTCTTTTTTTCATTTTTTGTTTATTATGACTAAATTTTAAATGGGTTCTGTTTGTTTGGTTCTTTTTAGGTCGCTGCTACTCGAGCGGCTGCTGAGGATGCTTATCATGTTGTTAGAAAAGGTTTTGTTTTTCTCGCCTTTTTCTGACAAATTGGTTTCAATTTCTTGCTTTCTTTACTGATTTTATGGCGTTGCTTTTGATTCTGTAGGAACGATTTCTACTCACAATTTTGAAAATACGGTTAGTATCTCTTGCTTCAGACTCAAACTGTGGAGTCTGCTAGTTTATGGCTTTTGAATGCTGAAATTTTCATTCTGAGAATGTTTATAATTAGGAACCAGACTTTTAATTAGTAGATTATATACTTACCTCTATTTTTCTATTTGTTGCAGTAGTTTCTGTTTTGAATTATCTAACACGTGAGTTTAGAGTTTTACATGAAAAAACCAAGATCATCCAAATTAGATAAATATCACAGAAATGGAACTATGGTTAAGAAAGACGAATAGTTCTTACCTCCGCCAATAGGGTGCAACTTTCTTCTTAGTGGCTCACCCACGTGAACTCTAAAGTTAAATGTGTGTAGTTTAAAATAATTCTTTGTTGGGTGAACTCATGAGATTTTTCCGAGTAAGCATGTAAGTGAAGATAAAAGATTTGTGTTTGTTTGTGGTGATGTTGGGGATTCCAAATCCTTGACTTGGAGCTTTACAACCGGCACTTTTTTATCATTTCGATACAAATACTATTAAAGTTACAAAATGATTTGGAACTCTCATTGCACTTGGAAAAGATACAAAATGATTATGTGTTCTGTAAAAGAATAAGTTTGAATTGCCACCATGGCCTTGAAAGCTTAAAGCTTAAGTGAACTAGTAGGTTCTTGAACTTTAATATTACCTGCTTTTTGGTCTTTTTGATCTATAAGAAAAATATTGAAATTTAAAATTGTTGTTACTCTCTTACTCTACTCCTTCGTTCAGCTAATTAACTTGAACTTCTGTTGCAGTTGAAGAAAATGTGTAAAGAAGGTGCATATTGGGGTAAGTATGGATCCCATTACTCCTCAATGAAGTACTTAGATTAGTGGATGAGTTTCAGCATCTATAAACCTCATGCCAATTTGAAAAGATCTTGCTTTTGATTCATTTTCTTGGAAACTAACCTTACACCTTTGAAAATGATTTTGAAAGTTGATTTGAAAATATAGAGAAGGCAAATAATTGACCAACTGTTGTTTCGTTTGAATGCAGGAGCCGTAGCTGGAGCTTATGTTGGTATGGAGTATGGAGTAGAAAGGATTCGCGGCACAAGAGATTGGGTATGTTTTCTATTAATTCAAAACCGTCCTTTAAATCAAGTTCGAGCTATTCTGTTAGATTATTGCTTCCAGCTCTCTATGTTTGTTTGGGAATATTTTCAATGTTCTGTTTGATTTGTGTTTCGGTTTAGTGACAAGTTTTATAACTCAGACCTTGGTTCTCTGTACTATTTCCAACAAAAGTTCTCTCTAATGTATGTAGTATCTCGAATTACTTCAAGAACCTATAGTTTCTTATTGATCTCACTTCCCCCATTGGTAAATTTATGGAAAGAAATTTTGAATTTGAATCAATATAGTTGAGCATTTGTTTCCAGAAAAATGCAATGATTGGAGGTGCTTTGACGGGAGCTCTAGTATCAGCCGCGAGCAACAACAACCGAGACAAAGTTGTTATTGACGCAATAACAGGAGGAGCTGTTGCAACCGCTGCAGAGTTCATAAACTATCTTACTTGACACCGAGGTTTACCGAGCATTTTCATGTCCCGTTTCTTGTAAACCTCGAGCAAAAGGTACGGTGAATCATGCCCTGTTTATAAGAAATAACATCAAAATGTTAATATATGTAACAATGTATTGAAACTTTTTTTCATTTTCCTTTTGCAGAATAATCAGCTTTGTATGATTAGTCTCTCTTAGAGTTGCAGCCTAAACTATGAAGAAAAAGAGAAACAAAGAGTAATACAAATATCTTATTTCTTCATTAATGAGAGCCACATGTTTTGTTGAGGCTGTAATCGCAGCTATAGTTTCATTGTTATAAGGAACAAAAGTATTGGTTAAGTTTTTAAGAAAGCGATTTTTCTTCTTTTTTGTCTTTTAAGCTTAACATAACAAATTGAAGTTGGTTCAACTTTTAATTCAGACTTGTGAGAATCTATATGACACCAATCACAATCATGAAAACATTCTTTACCTATAATGCTATTGTGAAGCCAATCACAACATGATAC

mRNA sequence

GCAACACCAACGGCAAATACTGGCCTCGGGCTGGGCAAACGAAAAAAGTTGGACTCATCTTCTTCTTCAAGAATCCAATCAAATCAAAGATCCAAAAAGCCACTAAAATCCAAATTTATTTCACATTTTAAGTACACTCCAAAAATCTTGAACAATTTGTAGCGGCAAAAATCAGGGACAACCCATTTCTACCACCATCCTCCACTTTCAATCCCTTCTCACACACTATCTCTACAACGACACCATGCCTCGCACCGGCTTCGTCGGCTCCTTATCGACCCCCAAGGTTGATGTCGTCATCGATATGGGTAATCCCTTTCTCAACCTCACCGTCGATGGCTTCTTGAAGATCGGATCCGTCGCTGCTACTCGAGCGGCTGCTGAGGATGCTTATCATGTTGTTAGAAAAGGAACGATTTCTACTCACAATTTTGAAAATACGTTGAAGAAAATGTGTAAAGAAGGTGCATATTGGGGAGCCGTAGCTGGAGCTTATGTTGGTATGGAGTATGGAGTAGAAAGGATTCGCGGCACAAGAGATTGGAAAAATGCAATGATTGGAGGTGCTTTGACGGGAGCTCTAGTATCAGCCGCGAGCAACAACAACCGAGACAAAGTTGTTATTGACGCAATAACAGGAGGAGCTGTTGCAACCGCTGCAGAGTTCATAAACTATCTTACTTGACACCGAGGTTTACCGAGCATTTTCATGTCCCGTTTCTTGTAAACCTCGAGCAAAAGAATAATCAGCTTTGTATGATTAGTCTCTCTTAGAGTTGCAGCCTAAACTATGAAGAAAAAGAGAAACAAAGAGTAATACAAATATCTTATTTCTTCATTAATGAGAGCCACATGTTTTGTTGAGGCTGTAATCGCAGCTATAGTTTCATTGTTATAAGGAACAAAAGTATTGGTTAAGTTTTTAAGAAAGCGATTTTTCTTCTTTTTTGTCTTTTAAGCTTAACATAACAAATTGAAGTTGGTTCAACTTTTAATTCAGACTTGTGAGAATCTATATGACACCAATCACAATCATGAAAACATTCTTTACCTATAATGCTATTGTGAAGCCAATCACAACATGATAC

Coding sequence (CDS)

ATGCCTCGCACCGGCTTCGTCGGCTCCTTATCGACCCCCAAGGTTGATGTCGTCATCGATATGGGTAATCCCTTTCTCAACCTCACCGTCGATGGCTTCTTGAAGATCGGATCCGTCGCTGCTACTCGAGCGGCTGCTGAGGATGCTTATCATGTTGTTAGAAAAGGAACGATTTCTACTCACAATTTTGAAAATACGTTGAAGAAAATGTGTAAAGAAGGTGCATATTGGGGAGCCGTAGCTGGAGCTTATGTTGGTATGGAGTATGGAGTAGAAAGGATTCGCGGCACAAGAGATTGGAAAAATGCAATGATTGGAGGTGCTTTGACGGGAGCTCTAGTATCAGCCGCGAGCAACAACAACCGAGACAAAGTTGTTATTGACGCAATAACAGGAGGAGCTGTTGCAACCGCTGCAGAGTTCATAAACTATCTTACTTGA

Protein sequence

MPRTGFVGSLSTPKVDVVIDMGNPFLNLTVDGFLKIGSVAATRAAAEDAYHVVRKGTISTHNFENTLKKMCKEGAYWGAVAGAYVGMEYGVERIRGTRDWKNAMIGGALTGALVSAASNNNRDKVVIDAITGGAVATAAEFINYLT

Homology

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BLAST of Pay0019910.1 vs. ExPASy Swiss-Prot
Match: Q41050 (Outer envelope pore protein 16, chloroplastic OS=Pisum sativum OX=3888 GN=OEP16 PE=1 SV=1)

HSP 1 Score: 251.9 bits (642), Expect = 4.4e-66
Identity = 117/146 (80.14%), Postives = 136/146 (93.15%), Query Frame = 0


Query: 1   MPRTGFVGSLSTPKVDVVIDMGNPFLNLTVDGFLKIGSVAATRAAAEDAYHVVRKGTIST 60
           MPR+ F GSLS+PK+DVVIDMGNPFLNLTVDGFLKIG+VAATR+ AED +H++RKG+IS+
Sbjct: 1   MPRSSFSGSLSSPKLDVVIDMGNPFLNLTVDGFLKIGAVAATRSVAEDTFHIIRKGSISS 60

Query: 61  HNFENTLKKMCKEGAYWGAVAGAYVGMEYGVERIRGTRDWKNAMIGGALTGALVSAASNN 120
           ++FE +LKKMCKEGAYWGA+AG YVGMEYGVERIRGTRDWKNAM GGA+TGALVSAASNN
Sbjct: 61  NDFEKSLKKMCKEGAYWGAIAGVYVGMEYGVERIRGTRDWKNAMFGGAVTGALVSAASNN 120

Query: 121 NRDKVVIDAITGGAVATAAEFINYLT 147
            +DK+ +DAITG A+ATAAEFINYLT
Sbjct: 121 KKDKIAVDAITGAAIATAAEFINYLT 146

[Close]

BLAST of Pay0019910.1 vs. ExPASy Swiss-Prot
Match: Q9ZV24 (Outer envelope pore protein 16-1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=OEP161 PE=1 SV=1)

HSP 1 Score: 193.7 bits (491), Expect = 1.4e-48
Identity = 86/143 (60.14%), Postives = 111/143 (77.62%), Query Frame = 0


Query: 1   MPRTGFVGSLSTPKVDVVIDMGNPFLNLTVDGFLKIGSVAATRAAAEDAYHVVRKGTIST 60
           MP + F G++STPK+ V +DMGNPFLNLTVD FLKIG+V  T++ AED Y  + KG++S 
Sbjct: 1   MPSSTFSGTVSTPKLSVAVDMGNPFLNLTVDAFLKIGAVGVTKSLAEDTYKAIDKGSLSK 60

Query: 61  HNFENTLKKMCKEGAYWGAVAGAYVGMEYGVERIRGTRDWKNAMIGGALTGALVSAASNN 120
              E+ LKK+CKEG YWGA  G Y+G EYG+ERIRG+RDWKNAM+ GA TGA++SA    
Sbjct: 61  STLEHALKKLCKEGVYWGAAGGVYIGTEYGIERIRGSRDWKNAMLAGAATGAVLSAVGKK 120

Query: 121 NRDKVVIDAITGGAVATAAEFIN 144
            +D +VIDAI GGA+ATA++F+N
Sbjct: 121 GKDTIVIDAILGGALATASQFVN 143

[Close]

BLAST of Pay0019910.1 vs. ExPASy Swiss-Prot
Match: Q0WMZ5 (Outer envelope pore protein 16-2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=OEP162 PE=2 SV=1)

HSP 1 Score: 81.6 bits (200), Expect = 7.9e-15
Identity = 49/155 (31.61%), Postives = 74/155 (47.74%), Query Frame = 0


Query: 18  VIDMGNPFLNLTVDGFLKIGSVAATRAAAEDAYHVVRKGT---------------ISTHN 77
           + D+G+P LN   D F+K   V A +A + +AY  V  G                   H 
Sbjct: 21  LFDLGHPLLNRIADSFVKAAGVGALQAVSREAYFTVVDGAGFDSNNVGPPSEITGNKKHR 80

Query: 78  FEN-----------TLKKMCKEGAYWGAVAGAYVGMEYGVERIR-GTRDWKNAMIGGALT 137
           F N            +K   KE   WG  AG Y G+ YG+  +R G  DW+N+ + GALT
Sbjct: 81  FPNLRGESSKSLDALVKNTGKESLQWGLAAGLYSGITYGMTEVRGGAHDWRNSAVAGALT 140

Query: 138 GA--LVSAASNNNRDKVVIDAITGGAVATAAEFIN 144
           GA   ++ +   + ++VV  A+TG A++TAA  ++
Sbjct: 141 GAAMAMTTSERTSHEQVVQSALTGAAISTAANLLS 175

[Close]

BLAST of Pay0019910.1 vs. ExPASy Swiss-Prot
Match: Q9LZH8 (Outer envelope pore protein 16-4, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=OEP164 PE=2 SV=1)

HSP 1 Score: 50.8 bits (120), Expect = 1.5e-05
Identity = 32/100 (32.00%), Postives = 52/100 (52.00%), Query Frame = 0


Query: 24  PFLNLTVDGFLKI---GSVAATRAAAEDAYHVVRKGTISTHNFENTLKKMCKEGAYWGAV 83
           P  +LTV+  L++   G +    A   DA  +   G +S  +F    K + + G   G V
Sbjct: 10  PCSSLTVESVLRVATAGGLYGLCAGPRDARKIGLSG-VSQASF--VAKSIGRFGFQCGLV 69

Query: 84  AGAYVGMEYGVERIRGTRDWKNAMIGGALTGALVSAASNN 121
           +G +     G++R RG  DW NA++GGA+ GA V+ ++ N
Sbjct: 70  SGVFTMTHCGLQRYRGKNDWVNALVGGAVAGAAVAISTRN 106

[Close]

BLAST of Pay0019910.1 vs. ExPASy TrEMBL
Match: A0A5D3BDN0 (Outer envelope pore protein 16 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold194G002350 PE=4 SV=1)

HSP 1 Score: 290.4 bits (742), Expect = 4.1e-75
Identity = 144/146 (98.63%), Postives = 145/146 (99.32%), Query Frame = 0


Query: 1   MPRTGFVGSLSTPKVDVVIDMGNPFLNLTVDGFLKIGSVAATRAAAEDAYHVVRKGTIST 60
           MPRTGFVGSLSTPKVDVVIDMGNPFLNLTVDGFLKIGSVAATRAAAEDAYHVVRKGTIST
Sbjct: 1   MPRTGFVGSLSTPKVDVVIDMGNPFLNLTVDGFLKIGSVAATRAAAEDAYHVVRKGTIST 60

Query: 61  HNFENTLKKMCKEGAYWGAVAGAYVGMEYGVERIRGTRDWKNAMIGGALTGALVSAASNN 120
           HNFENTLKKMC EGAYWGAVAGAYVGMEYGVER+RGTRDWKNAMIGGALTGALVSAASNN
Sbjct: 61  HNFENTLKKMCTEGAYWGAVAGAYVGMEYGVERVRGTRDWKNAMIGGALTGALVSAASNN 120

Query: 121 NRDKVVIDAITGGAVATAAEFINYLT 147
           NRDKVVIDAITGGAVATAAEFINYLT
Sbjct: 121 NRDKVVIDAITGGAVATAAEFINYLT 146

[Close]

BLAST of Pay0019910.1 vs. ExPASy TrEMBL
Match: A0A1S3C572 (outer envelope pore protein 16, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103497163 PE=4 SV=1)

HSP 1 Score: 290.4 bits (742), Expect = 4.1e-75
Identity = 144/146 (98.63%), Postives = 145/146 (99.32%), Query Frame = 0


Query: 1   MPRTGFVGSLSTPKVDVVIDMGNPFLNLTVDGFLKIGSVAATRAAAEDAYHVVRKGTIST 60
           MPRTGFVGSLSTPKVDVVIDMGNPFLNLTVDGFLKIGSVAATRAAAEDAYHVVRKGTIST
Sbjct: 1   MPRTGFVGSLSTPKVDVVIDMGNPFLNLTVDGFLKIGSVAATRAAAEDAYHVVRKGTIST 60

Query: 61  HNFENTLKKMCKEGAYWGAVAGAYVGMEYGVERIRGTRDWKNAMIGGALTGALVSAASNN 120
           HNFENTLKKMC EGAYWGAVAGAYVGMEYGVER+RGTRDWKNAMIGGALTGALVSAASNN
Sbjct: 61  HNFENTLKKMCTEGAYWGAVAGAYVGMEYGVERVRGTRDWKNAMIGGALTGALVSAASNN 120

Query: 121 NRDKVVIDAITGGAVATAAEFINYLT 147
           NRDKVVIDAITGGAVATAAEFINYLT
Sbjct: 121 NRDKVVIDAITGGAVATAAEFINYLT 146

[Close]

BLAST of Pay0019910.1 vs. ExPASy TrEMBL
Match: A0A6J1HZI5 (outer envelope pore protein 16, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111469516 PE=4 SV=1)

HSP 1 Score: 283.1 bits (723), Expect = 6.6e-73
Identity = 139/146 (95.21%), Postives = 143/146 (97.95%), Query Frame = 0


Query: 1   MPRTGFVGSLSTPKVDVVIDMGNPFLNLTVDGFLKIGSVAATRAAAEDAYHVVRKGTIST 60
           MPRTGFVGSLSTPKVDVVIDMGNPFLNLTVDGFLKIGSVAATRAAAEDAYHVVRKGTIS+
Sbjct: 1   MPRTGFVGSLSTPKVDVVIDMGNPFLNLTVDGFLKIGSVAATRAAAEDAYHVVRKGTISS 60

Query: 61  HNFENTLKKMCKEGAYWGAVAGAYVGMEYGVERIRGTRDWKNAMIGGALTGALVSAASNN 120
           HNFENTLKKMCKEGAYWG VAG YVGMEYGVERIRG RDWKNAMIGGALTGA+VSAASN+
Sbjct: 61  HNFENTLKKMCKEGAYWGTVAGVYVGMEYGVERIRGRRDWKNAMIGGALTGAMVSAASNS 120

Query: 121 NRDKVVIDAITGGAVATAAEFINYLT 147
           NRDK+VIDAITGGAVATAAEFINYLT
Sbjct: 121 NRDKIVIDAITGGAVATAAEFINYLT 146

[Close]

BLAST of Pay0019910.1 vs. ExPASy TrEMBL
Match: A0A6J1HJY9 (outer envelope pore protein 16, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111464797 PE=4 SV=1)

HSP 1 Score: 283.1 bits (723), Expect = 6.6e-73
Identity = 139/146 (95.21%), Postives = 143/146 (97.95%), Query Frame = 0


Query: 1   MPRTGFVGSLSTPKVDVVIDMGNPFLNLTVDGFLKIGSVAATRAAAEDAYHVVRKGTIST 60
           MPRTGFVGSLSTPKVDVVIDMGNPFLNLTVDGFLKIGSVAATRAAAEDAYHVVRKGTIS+
Sbjct: 1   MPRTGFVGSLSTPKVDVVIDMGNPFLNLTVDGFLKIGSVAATRAAAEDAYHVVRKGTISS 60

Query: 61  HNFENTLKKMCKEGAYWGAVAGAYVGMEYGVERIRGTRDWKNAMIGGALTGALVSAASNN 120
           HNFENTLKKMCKEGAYWG VAG YVGMEYGVERIRG RDWKNAMIGGALTGA+VSAASN+
Sbjct: 61  HNFENTLKKMCKEGAYWGTVAGVYVGMEYGVERIRGRRDWKNAMIGGALTGAMVSAASNS 120

Query: 121 NRDKVVIDAITGGAVATAAEFINYLT 147
           NRDK+VIDAITGGAVATAAEFINYLT
Sbjct: 121 NRDKIVIDAITGGAVATAAEFINYLT 146

[Close]

BLAST of Pay0019910.1 vs. ExPASy TrEMBL
Match: A0A5A7VKK1 (Outer envelope pore protein 16 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold352G00490 PE=4 SV=1)

HSP 1 Score: 267.7 bits (683), Expect = 2.9e-68
Identity = 136/146 (93.15%), Postives = 137/146 (93.84%), Query Frame = 0


Query: 1   MPRTGFVGSLSTPKVDVVIDMGNPFLNLTVDGFLKIGSVAATRAAAEDAYHVVRKGTIST 60
           MPRTGFVGSLSTPKVDVVIDMGNPFLNLTVDGFLKIGSVAATRAAAEDAYHVVRKGTIST
Sbjct: 1   MPRTGFVGSLSTPKVDVVIDMGNPFLNLTVDGFLKIGSVAATRAAAEDAYHVVRKGTIST 60

Query: 61  HNFENTLKKMCKEGAYWGAVAGAYVGMEYGVERIRGTRDWKNAMIGGALTGALVSAASNN 120
           HNFENT+   C     W AVAGAYVGMEYGVERIRGTRDWKNAMIGGALTGALVSAASNN
Sbjct: 61  HNFENTVSISCFRLKLWRAVAGAYVGMEYGVERIRGTRDWKNAMIGGALTGALVSAASNN 120

Query: 121 NRDKVVIDAITGGAVATAAEFINYLT 147
           NRDKVVIDAITGGAVATAAEFINYLT
Sbjct: 121 NRDKVVIDAITGGAVATAAEFINYLT 146

[Close]

BLAST of Pay0019910.1 vs. NCBI nr
Match: XP_008457483.1 (PREDICTED: outer envelope pore protein 16, chloroplastic [Cucumis melo] >TYJ97413.1 outer envelope pore protein 16 [Cucumis melo var. makuwa])

HSP 1 Score: 290.4 bits (742), Expect = 8.5e-75
Identity = 144/146 (98.63%), Postives = 145/146 (99.32%), Query Frame = 0


Query: 1   MPRTGFVGSLSTPKVDVVIDMGNPFLNLTVDGFLKIGSVAATRAAAEDAYHVVRKGTIST 60
           MPRTGFVGSLSTPKVDVVIDMGNPFLNLTVDGFLKIGSVAATRAAAEDAYHVVRKGTIST
Sbjct: 1   MPRTGFVGSLSTPKVDVVIDMGNPFLNLTVDGFLKIGSVAATRAAAEDAYHVVRKGTIST 60

Query: 61  HNFENTLKKMCKEGAYWGAVAGAYVGMEYGVERIRGTRDWKNAMIGGALTGALVSAASNN 120
           HNFENTLKKMC EGAYWGAVAGAYVGMEYGVER+RGTRDWKNAMIGGALTGALVSAASNN
Sbjct: 61  HNFENTLKKMCTEGAYWGAVAGAYVGMEYGVERVRGTRDWKNAMIGGALTGALVSAASNN 120

Query: 121 NRDKVVIDAITGGAVATAAEFINYLT 147
           NRDKVVIDAITGGAVATAAEFINYLT
Sbjct: 121 NRDKVVIDAITGGAVATAAEFINYLT 146

[Close]

BLAST of Pay0019910.1 vs. NCBI nr
Match: XP_038893818.1 (outer envelope pore protein 16, chloroplastic [Benincasa hispida])

HSP 1 Score: 288.9 bits (738), Expect = 2.5e-74
Identity = 141/146 (96.58%), Postives = 144/146 (98.63%), Query Frame = 0


Query: 1   MPRTGFVGSLSTPKVDVVIDMGNPFLNLTVDGFLKIGSVAATRAAAEDAYHVVRKGTIST 60
           MPRTGF+GSLSTPKVDVVIDMGNPFLNLTVDGFLKIGSVAATRAAAEDAYHVVRKGTIST
Sbjct: 1   MPRTGFIGSLSTPKVDVVIDMGNPFLNLTVDGFLKIGSVAATRAAAEDAYHVVRKGTIST 60

Query: 61  HNFENTLKKMCKEGAYWGAVAGAYVGMEYGVERIRGTRDWKNAMIGGALTGALVSAASNN 120
           HNFENTLKKMCKEGAYWG VAG YVGMEYGVER+RGTRDWKNAMIGGALTGALVSAASNN
Sbjct: 61  HNFENTLKKMCKEGAYWGTVAGVYVGMEYGVERVRGTRDWKNAMIGGALTGALVSAASNN 120

Query: 121 NRDKVVIDAITGGAVATAAEFINYLT 147
           NRDK+VIDAITGGAVATAAEFINYLT
Sbjct: 121 NRDKIVIDAITGGAVATAAEFINYLT 146

[Close]

BLAST of Pay0019910.1 vs. NCBI nr
Match: XP_022964801.1 (outer envelope pore protein 16, chloroplastic [Cucurbita moschata] >XP_022970582.1 outer envelope pore protein 16, chloroplastic [Cucurbita maxima] >XP_023519566.1 outer envelope pore protein 16, chloroplastic [Cucurbita pepo subsp. pepo] >KAG6583432.1 Outer envelope pore protein 16, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 283.1 bits (723), Expect = 1.4e-72
Identity = 139/146 (95.21%), Postives = 143/146 (97.95%), Query Frame = 0


Query: 1   MPRTGFVGSLSTPKVDVVIDMGNPFLNLTVDGFLKIGSVAATRAAAEDAYHVVRKGTIST 60
           MPRTGFVGSLSTPKVDVVIDMGNPFLNLTVDGFLKIGSVAATRAAAEDAYHVVRKGTIS+
Sbjct: 1   MPRTGFVGSLSTPKVDVVIDMGNPFLNLTVDGFLKIGSVAATRAAAEDAYHVVRKGTISS 60

Query: 61  HNFENTLKKMCKEGAYWGAVAGAYVGMEYGVERIRGTRDWKNAMIGGALTGALVSAASNN 120
           HNFENTLKKMCKEGAYWG VAG YVGMEYGVERIRG RDWKNAMIGGALTGA+VSAASN+
Sbjct: 61  HNFENTLKKMCKEGAYWGTVAGVYVGMEYGVERIRGRRDWKNAMIGGALTGAMVSAASNS 120

Query: 121 NRDKVVIDAITGGAVATAAEFINYLT 147
           NRDK+VIDAITGGAVATAAEFINYLT
Sbjct: 121 NRDKIVIDAITGGAVATAAEFINYLT 146

[Close]

BLAST of Pay0019910.1 vs. NCBI nr
Match: XP_011658142.1 (outer envelope pore protein 16, chloroplastic [Cucumis sativus] >KAE8653245.1 hypothetical protein Csa_019696 [Cucumis sativus])

HSP 1 Score: 270.0 bits (689), Expect = 1.2e-68
Identity = 135/146 (92.47%), Postives = 138/146 (94.52%), Query Frame = 0


Query: 1   MPRTGFVGSLSTPKVDVVIDMGNPFLNLTVDGFLKIGSVAATRAAAEDAYHVVRKGTIST 60
           MP TGFVGS STPK+DVVID G PFLNLTVDGFLKIGSVAATRAAAEDAY VV+ G IS+
Sbjct: 1   MPPTGFVGSSSTPKIDVVIDTGYPFLNLTVDGFLKIGSVAATRAAAEDAYFVVKNGAISS 60

Query: 61  HNFENTLKKMCKEGAYWGAVAGAYVGMEYGVERIRGTRDWKNAMIGGALTGALVSAASNN 120
           H FENTLKKMCKEGAYWGAVAGAYVGMEYGVERIRGTRDWKNAMIGGALTGALVSAASNN
Sbjct: 61  HKFENTLKKMCKEGAYWGAVAGAYVGMEYGVERIRGTRDWKNAMIGGALTGALVSAASNN 120

Query: 121 NRDKVVIDAITGGAVATAAEFINYLT 147
           NRDKVVIDAITGGAVATAAEFINYLT
Sbjct: 121 NRDKVVIDAITGGAVATAAEFINYLT 146

[Close]

BLAST of Pay0019910.1 vs. NCBI nr
Match: KAA0067730.1 (outer envelope pore protein 16 [Cucumis melo var. makuwa])

HSP 1 Score: 267.7 bits (683), Expect = 5.9e-68
Identity = 136/146 (93.15%), Postives = 137/146 (93.84%), Query Frame = 0


Query: 1   MPRTGFVGSLSTPKVDVVIDMGNPFLNLTVDGFLKIGSVAATRAAAEDAYHVVRKGTIST 60
           MPRTGFVGSLSTPKVDVVIDMGNPFLNLTVDGFLKIGSVAATRAAAEDAYHVVRKGTIST
Sbjct: 1   MPRTGFVGSLSTPKVDVVIDMGNPFLNLTVDGFLKIGSVAATRAAAEDAYHVVRKGTIST 60

Query: 61  HNFENTLKKMCKEGAYWGAVAGAYVGMEYGVERIRGTRDWKNAMIGGALTGALVSAASNN 120
           HNFENT+   C     W AVAGAYVGMEYGVERIRGTRDWKNAMIGGALTGALVSAASNN
Sbjct: 61  HNFENTVSISCFRLKLWRAVAGAYVGMEYGVERIRGTRDWKNAMIGGALTGALVSAASNN 120

Query: 121 NRDKVVIDAITGGAVATAAEFINYLT 147
           NRDKVVIDAITGGAVATAAEFINYLT
Sbjct: 121 NRDKVVIDAITGGAVATAAEFINYLT 146

[Close]

BLAST of Pay0019910.1 vs. TAIR 10
Match: AT2G28900.1 (outer plastid envelope protein 16-1 )

HSP 1 Score: 193.7 bits (491), Expect = 1.0e-49
Identity = 86/143 (60.14%), Postives = 111/143 (77.62%), Query Frame = 0


Query: 1   MPRTGFVGSLSTPKVDVVIDMGNPFLNLTVDGFLKIGSVAATRAAAEDAYHVVRKGTIST 60
           MP + F G++STPK+ V +DMGNPFLNLTVD FLKIG+V  T++ AED Y  + KG++S 
Sbjct: 1   MPSSTFSGTVSTPKLSVAVDMGNPFLNLTVDAFLKIGAVGVTKSLAEDTYKAIDKGSLSK 60

Query: 61  HNFENTLKKMCKEGAYWGAVAGAYVGMEYGVERIRGTRDWKNAMIGGALTGALVSAASNN 120
              E+ LKK+CKEG YWGA  G Y+G EYG+ERIRG+RDWKNAM+ GA TGA++SA    
Sbjct: 61  STLEHALKKLCKEGVYWGAAGGVYIGTEYGIERIRGSRDWKNAMLAGAATGAVLSAVGKK 120

Query: 121 NRDKVVIDAITGGAVATAAEFIN 144
            +D +VIDAI GGA+ATA++F+N
Sbjct: 121 GKDTIVIDAILGGALATASQFVN 143

[Close]

BLAST of Pay0019910.1 vs. TAIR 10
Match: AT4G16160.1 (Mitochondrial import inner membrane translocase subunit Tim17/Tim22/Tim23 family protein )

HSP 1 Score: 83.6 bits (205), Expect = 1.5e-16
Identity = 50/153 (32.68%), Postives = 75/153 (49.02%), Query Frame = 0


Query: 18  VIDMGNPFLNLTVDGFLKIGSVAATRAAAEDAYHVVRKGTIST-------------HNFE 77
           + D+G+P LN   D F+K   V A +A + +AY  V  G  S              H F 
Sbjct: 21  LFDLGHPLLNRIADSFVKAAGVGALQAVSREAYFTVVDGFDSNNVGPPSEITGNKKHRFP 80

Query: 78  N-----------TLKKMCKEGAYWGAVAGAYVGMEYGVERIR-GTRDWKNAMIGGALTGA 137
           N            +K   KE   WG  AG Y G+ YG+  +R G  DW+N+ + GALTGA
Sbjct: 81  NLRGESSKSLDALVKNTGKESLQWGLAAGLYSGITYGMTEVRGGAHDWRNSAVAGALTGA 140

Query: 138 --LVSAASNNNRDKVVIDAITGGAVATAAEFIN 144
              ++ +   + ++VV  A+TG A++TAA  ++
Sbjct: 141 AMAMTTSERTSHEQVVQSALTGAAISTAANLLS 173

[Close]

BLAST of Pay0019910.1 vs. TAIR 10
Match: AT4G16160.2 (Mitochondrial import inner membrane translocase subunit Tim17/Tim22/Tim23 family protein )

HSP 1 Score: 81.6 bits (200), Expect = 5.6e-16
Identity = 49/155 (31.61%), Postives = 74/155 (47.74%), Query Frame = 0


Query: 18  VIDMGNPFLNLTVDGFLKIGSVAATRAAAEDAYHVVRKGT---------------ISTHN 77
           + D+G+P LN   D F+K   V A +A + +AY  V  G                   H 
Sbjct: 21  LFDLGHPLLNRIADSFVKAAGVGALQAVSREAYFTVVDGAGFDSNNVGPPSEITGNKKHR 80

Query: 78  FEN-----------TLKKMCKEGAYWGAVAGAYVGMEYGVERIR-GTRDWKNAMIGGALT 137
           F N            +K   KE   WG  AG Y G+ YG+  +R G  DW+N+ + GALT
Sbjct: 81  FPNLRGESSKSLDALVKNTGKESLQWGLAAGLYSGITYGMTEVRGGAHDWRNSAVAGALT 140

Query: 138 GA--LVSAASNNNRDKVVIDAITGGAVATAAEFIN 144
           GA   ++ +   + ++VV  A+TG A++TAA  ++
Sbjct: 141 GAAMAMTTSERTSHEQVVQSALTGAAISTAANLLS 175

[Close]

BLAST of Pay0019910.1 vs. TAIR 10
Match: AT3G62880.1 (Mitochondrial import inner membrane translocase subunit Tim17/Tim22/Tim23 family protein )

HSP 1 Score: 50.8 bits (120), Expect = 1.1e-06
Identity = 32/100 (32.00%), Postives = 52/100 (52.00%), Query Frame = 0


Query: 24  PFLNLTVDGFLKI---GSVAATRAAAEDAYHVVRKGTISTHNFENTLKKMCKEGAYWGAV 83
           P  +LTV+  L++   G +    A   DA  +   G +S  +F    K + + G   G V
Sbjct: 10  PCSSLTVESVLRVATAGGLYGLCAGPRDARKIGLSG-VSQASF--VAKSIGRFGFQCGLV 69

Query: 84  AGAYVGMEYGVERIRGTRDWKNAMIGGALTGALVSAASNN 121
           +G +     G++R RG  DW NA++GGA+ GA V+ ++ N
Sbjct: 70  SGVFTMTHCGLQRYRGKNDWVNALVGGAVAGAAVAISTRN 106

[Close]

BLAST of Pay0019910.1 vs. TAIR 10
Match: AT3G62880.2 (Mitochondrial import inner membrane translocase subunit Tim17/Tim22/Tim23 family protein )

HSP 1 Score: 50.8 bits (120), Expect = 1.1e-06
Identity = 32/100 (32.00%), Postives = 52/100 (52.00%), Query Frame = 0


Query: 24  PFLNLTVDGFLKI---GSVAATRAAAEDAYHVVRKGTISTHNFENTLKKMCKEGAYWGAV 83
           P  +LTV+  L++   G +    A   DA  +   G +S  +F    K + + G   G V
Sbjct: 10  PCSSLTVESVLRVATAGGLYGLCAGPRDARKIGLSG-VSQASF--VAKSIGRFGFQCGLV 69

Query: 84  AGAYVGMEYGVERIRGTRDWKNAMIGGALTGALVSAASNN 121
           +G +     G++R RG  DW NA++GGA+ GA V+ ++ N
Sbjct: 70  SGVFTMTHCGLQRYRGKNDWVNALVGGAVAGAAVAISTRN 106

The following BLAST results are available for this feature:

BLAST of Pay0019910.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q41050	4.4e-66	80.14	Outer envelope pore protein 16, chloroplastic OS=Pisum sativum OX=3888 GN=OEP16 ...	[more]
Q9ZV24	1.4e-48	60.14	Outer envelope pore protein 16-1, chloroplastic OS=Arabidopsis thaliana OX=3702 ...	[more]
Q0WMZ5	7.9e-15	31.61	Outer envelope pore protein 16-2, chloroplastic OS=Arabidopsis thaliana OX=3702 ...	[more]
Q9LZH8	1.5e-05	32.00	Outer envelope pore protein 16-4, chloroplastic OS=Arabidopsis thaliana OX=3702 ...	[more]

BLAST of Pay0019910.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3BDN0	4.1e-75	98.63	Outer envelope pore protein 16 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_s...	[more]
A0A1S3C572	4.1e-75	98.63	outer envelope pore protein 16, chloroplastic OS=Cucumis melo OX=3656 GN=LOC1034...	[more]
A0A6J1HZI5	6.6e-73	95.21	outer envelope pore protein 16, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC...	[more]
A0A6J1HJY9	6.6e-73	95.21	outer envelope pore protein 16, chloroplastic OS=Cucurbita moschata OX=3662 GN=L...	[more]
A0A5A7VKK1	2.9e-68	93.15	Outer envelope pore protein 16 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_s...	[more]

BLAST of Pay0019910.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008457483.1	8.5e-75	98.63	PREDICTED: outer envelope pore protein 16, chloroplastic [Cucumis melo] >TYJ9741...	[more]
XP_038893818.1	2.5e-74	96.58	outer envelope pore protein 16, chloroplastic [Benincasa hispida]	[more]
XP_022964801.1	1.4e-72	95.21	outer envelope pore protein 16, chloroplastic [Cucurbita moschata] >XP_022970582...	[more]
XP_011658142.1	1.2e-68	92.47	outer envelope pore protein 16, chloroplastic [Cucumis sativus] >KAE8653245.1 hy...	[more]
KAA0067730.1	5.9e-68	93.15	outer envelope pore protein 16 [Cucumis melo var. makuwa]	[more]

BLAST of Pay0019910.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G28900.1	1.0e-49	60.14	outer plastid envelope protein 16-1	[more]
AT4G16160.1	1.5e-16	32.68	Mitochondrial import inner membrane translocase subunit Tim17/Tim22/Tim23 family...	[more]
AT4G16160.2	5.6e-16	31.61	Mitochondrial import inner membrane translocase subunit Tim17/Tim22/Tim23 family...	[more]
AT3G62880.1	1.1e-06	32.00	Mitochondrial import inner membrane translocase subunit Tim17/Tim22/Tim23 family...	[more]
AT3G62880.2	1.1e-06	32.00	Mitochondrial import inner membrane translocase subunit Tim17/Tim22/Tim23 family...	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Payzawat) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PFAM	PF02466	Tim17	coord: 59..135 e-value: 1.7E-11 score: 44.6
None	No IPR available	PANTHER	PTHR15371:SF2	OUTER ENVELOPE PORE PROTEIN 16-1, CHLOROPLASTIC	coord: 1..144
None	No IPR available	PANTHER	PTHR15371	TIM23	coord: 1..144

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Pay0019910	Pay0019910	gene

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Pay0019910.1-five_prime_utr	Pay0019910.1-five_prime_utr-chr12:2746310..2746553	five_prime_UTR

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Pay0019910.1-exon	Pay0019910.1-exon-chr12:2746310..2746667	exon
Pay0019910.1-exon	Pay0019910.1-exon-chr12:2746753..2746804	exon
Pay0019910.1-exon	Pay0019910.1-exon-chr12:2746893..2746924	exon
Pay0019910.1-exon	Pay0019910.1-exon-chr12:2747694..2747727	exon
Pay0019910.1-exon	Pay0019910.1-exon-chr12:2747938..2748005	exon
Pay0019910.1-exon	Pay0019910.1-exon-chr12:2748323..2748519	exon
Pay0019910.1-exon	Pay0019910.1-exon-chr12:2748614..2748960	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Pay0019910.1-cds	Pay0019910.1-cds-chr12:2746554..2746667	CDS
Pay0019910.1-cds	Pay0019910.1-cds-chr12:2746753..2746804	CDS
Pay0019910.1-cds	Pay0019910.1-cds-chr12:2746893..2746924	CDS
Pay0019910.1-cds	Pay0019910.1-cds-chr12:2747694..2747727	CDS
Pay0019910.1-cds	Pay0019910.1-cds-chr12:2747938..2748005	CDS
Pay0019910.1-cds	Pay0019910.1-cds-chr12:2748323..2748463	CDS

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Pay0019910.1-three_prime_utr	Pay0019910.1-three_prime_utr-chr12:2748464..2748519	three_prime_UTR
Pay0019910.1-three_prime_utr	Pay0019910.1-three_prime_utr-chr12:2748614..2748960	three_prime_UTR

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Pay0019910.1	Pay0019910.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0003333	amino acid transmembrane transport
biological_process	GO:0006811	ion transport
biological_process	GO:0045037	protein import into chloroplast stroma
cellular_component	GO:0009707	chloroplast outer membrane
cellular_component	GO:0034426	etioplast membrane
cellular_component	GO:0046930	pore complex
molecular_function	GO:0015171	amino acid transmembrane transporter activity
molecular_function	GO:0015288	porin activity
molecular_function	GO:0042803	protein homodimerization activity