Pay0016094.1 (mRNA) Melon (Payzawat) v1

Overview


Name	Pay0016094.1
Type	mRNA
Organism	Cucumis melo L. var. inodorus cv. Payzawat (Melon (Payzawat) v1)
Description	Unknown protein
Location	Contig00140_ERROPOS1134973: 72023 .. 72968 (-)
Sequence length	946
RNA-Seq Expression	Pay0016094.1
Synteny	Pay0016094.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CAAATCCTAAACTTTAGTTGCTTCACATTATACGCGCGTTTCACATAGAGTCGACGGAGAAAGATCGAGTCAGACCTAGAGGCATCGAGAAGCAGAGAGTCAAGGGAAGGACAACCGCTACCGGAGACTGTCGACGGCCGAGTTCAATCGATAAGCTCTAATAGAAGAGGGGGAGATCGCCGACGAGGGAAGAGTGCACAAGTCTCTGTGGCTGATTTGAATAATCTAGTGCCCTAAAATTTCTCGATTCTCTTTCCACCTGCCGATAATTTCAGGCTCCGGCGAAAGAGGACGCCGATGGGCTTTATCAGAAGTAGCTTCTCCTTTATAGCGGGATCTGTGTTCGGGATTTACGTGGCTCAAAATTACAACGTTCCCAATATCAGGAAGCTCGCAAATACTGGACTTGCGATGGCCAAGCACATTGAAGAGAATTACAGGAAGCCAAAGAAGAGGGATGATGATGATTGATTGGATGATTTACAATCCAGGTTCCCCCTTTTGACATACTATTGAAGTAGTGCTTGTTACTTCTGGATCTGTAGGCATTGAATATACGTTGAAATTTCGTGGTCTTATATACGGGAGACTGATTTTTTTTTCTTTAGAAATGTAACGAGTTTCGATCACATAATTGGAGTTTGGAATTTCTTCTCACATGAATGCATCATTTTTGGCTTTGGATGCTATTGTGGTAATAAATTTGGGATAAGTAATGCAACATTTTCTAAAGCCCTAGGTATGTGTTTGATTCCTTGTAAATATTTGCTACCGTTTGGTGCATTTTGCCCGGAATACTCTTTAATGTTGTATTGGGGAAGACCTTCCTTGTGGGAAATTTTTGGGCATTTTTTCCCGATTATATATCCCTGGAACTCGTATGATATTTTGATGACTGCAGTTATATAGTGTGTGTGTGTGTGTGTGTTTAAGAAACAAATTTCAT

mRNA sequence

CAAATCCTAAACTTTAGTTGCTTCACATTATACGCGCGTTTCACATAGAGTCGACGGAGAAAGATCGAGTCAGACCTAGAGGCATCGAGAAGCAGAGAGTCAAGGGAAGGACAACCGCTACCGGAGACTGTCGACGGCCGAGTTCAATCGATAAGCTCTAATAGAAGAGGGGGAGATCGCCGACGAGGGAAGAGTGCACAAGTCTCTGTGGCTGATTTGAATAATCTAGTGCCCTAAAATTTCTCGATTCTCTTTCCACCTGCCGATAATTTCAGGCTCCGGCGAAAGAGGACGCCGATGGGCTTTATCAGAAGTAGCTTCTCCTTTATAGCGGGATCTGTGTTCGGGATTTACGTGGCTCAAAATTACAACGTTCCCAATATCAGGAAGCTCGCAAATACTGGACTTGCGATGGCCAAGCACATTGAAGAGAATTACAGGAAGCCAAAGAAGAGGGATGATGATGATTGATTGGATGATTTACAATCCAGGTTCCCCCTTTTGACATACTATTGAAGTAGTGCTTGTTACTTCTGGATCTGTAGGCATTGAATATACGTTGAAATTTCGTGGTCTTATATACGGGAGACTGATTTTTTTTTCTTTAGAAATGTAACGAGTTTCGATCACATAATTGGAGTTTGGAATTTCTTCTCACATGAATGCATCATTTTTGGCTTTGGATGCTATTGTGGTAATAAATTTGGGATAAGTAATGCAACATTTTCTAAAGCCCTAGGTATGTGTTTGATTCCTTGTAAATATTTGCTACCGTTTGGTGCATTTTGCCCGGAATACTCTTTAATGTTGTATTGGGGAAGACCTTCCTTGTGGGAAATTTTTGGGCATTTTTTCCCGATTATATATCCCTGGAACTCGTATGATATTTTGATGACTGCAGTTATATAGTGTGTGTGTGTGTGTGTGTTTAAGAAACAAATTTCAT

Coding sequence (CDS)

ATGGGCTTTATCAGAAGTAGCTTCTCCTTTATAGCGGGATCTGTGTTCGGGATTTACGTGGCTCAAAATTACAACGTTCCCAATATCAGGAAGCTCGCAAATACTGGACTTGCGATGGCCAAGCACATTGAAGAGAATTACAGGAAGCCAAAGAAGAGGGATGATGATGATTGA

Protein sequence

MGFIRSSFSFIAGSVFGIYVAQNYNVPNIRKLANTGLAMAKHIEENYRKPKKRDDDD

Homology

[Close]

BLAST of Pay0016094.1 vs. ExPASy TrEMBL
Match: A0A5D3CR66 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G004310 PE=4 SV=1)

HSP 1 Score: 115.9 bits (289), Expect = 5.4e-23
Identity = 57/57 (100.00%), Postives = 57/57 (100.00%), Query Frame = 0


Query: 1  MGFIRSSFSFIAGSVFGIYVAQNYNVPNIRKLANTGLAMAKHIEENYRKPKKRDDDD 58
          MGFIRSSFSFIAGSVFGIYVAQNYNVPNIRKLANTGLAMAKHIEENYRKPKKRDDDD
Sbjct: 1  MGFIRSSFSFIAGSVFGIYVAQNYNVPNIRKLANTGLAMAKHIEENYRKPKKRDDDD 57

[Close]

BLAST of Pay0016094.1 vs. ExPASy TrEMBL
Match: A0A1S3B1N0 (uncharacterized protein LOC103484824 OS=Cucumis melo OX=3656 GN=LOC103484824 PE=4 SV=1)

HSP 1 Score: 115.9 bits (289), Expect = 5.4e-23
Identity = 57/57 (100.00%), Postives = 57/57 (100.00%), Query Frame = 0


Query: 1  MGFIRSSFSFIAGSVFGIYVAQNYNVPNIRKLANTGLAMAKHIEENYRKPKKRDDDD 58
          MGFIRSSFSFIAGSVFGIYVAQNYNVPNIRKLANTGLAMAKHIEENYRKPKKRDDDD
Sbjct: 1  MGFIRSSFSFIAGSVFGIYVAQNYNVPNIRKLANTGLAMAKHIEENYRKPKKRDDDD 57

[Close]

BLAST of Pay0016094.1 vs. ExPASy TrEMBL
Match: A0A6J1BSM8 (uncharacterized protein LOC111005345 OS=Momordica charantia OX=3673 GN=LOC111005345 PE=4 SV=1)

HSP 1 Score: 109.4 bits (272), Expect = 5.1e-21
Identity = 53/57 (92.98%), Postives = 55/57 (96.49%), Query Frame = 0


Query: 1  MGFIRSSFSFIAGSVFGIYVAQNYNVPNIRKLANTGLAMAKHIEENYRKPKKRDDDD 58
          MGFIRSSFSFIAG+V GIYVAQNYNVPNIRKLANTGL +AKHIEENYRKPKKRDDDD
Sbjct: 1  MGFIRSSFSFIAGTVLGIYVAQNYNVPNIRKLANTGLVVAKHIEENYRKPKKRDDDD 57

[Close]

BLAST of Pay0016094.1 vs. ExPASy TrEMBL
Match: A0A6J1KVJ8 (uncharacterized protein LOC111496825 OS=Cucurbita maxima OX=3661 GN=LOC111496825 PE=4 SV=1)

HSP 1 Score: 107.1 bits (266), Expect = 2.5e-20
Identity = 51/57 (89.47%), Postives = 55/57 (96.49%), Query Frame = 0


Query: 1  MGFIRSSFSFIAGSVFGIYVAQNYNVPNIRKLANTGLAMAKHIEENYRKPKKRDDDD 58
          MGFIRSSFSFI G+VFGIYVAQNY+VPNIRKLANTG+ MAKHIEENYRKPKKR+DDD
Sbjct: 1  MGFIRSSFSFIVGTVFGIYVAQNYSVPNIRKLANTGILMAKHIEENYRKPKKREDDD 57

[Close]

BLAST of Pay0016094.1 vs. ExPASy TrEMBL
Match: A0A6J1HHR2 (uncharacterized protein LOC111463630 OS=Cucurbita moschata OX=3662 GN=LOC111463630 PE=4 SV=1)

HSP 1 Score: 107.1 bits (266), Expect = 2.5e-20
Identity = 51/57 (89.47%), Postives = 55/57 (96.49%), Query Frame = 0


Query: 1  MGFIRSSFSFIAGSVFGIYVAQNYNVPNIRKLANTGLAMAKHIEENYRKPKKRDDDD 58
          MGFIRSSFSFI G+VFGIYVAQNY+VPNIRKLANTG+ MAKHIEENYRKPKKR+DDD
Sbjct: 1  MGFIRSSFSFIVGTVFGIYVAQNYSVPNIRKLANTGILMAKHIEENYRKPKKREDDD 57

[Close]

BLAST of Pay0016094.1 vs. NCBI nr
Match: XP_008440344.1 (PREDICTED: uncharacterized protein LOC103484824 [Cucumis melo] >TYK12839.1 uncharacterized protein E5676_scaffold255G004310 [Cucumis melo var. makuwa])

HSP 1 Score: 115.9 bits (289), Expect = 1.1e-22
Identity = 57/57 (100.00%), Postives = 57/57 (100.00%), Query Frame = 0


Query: 1  MGFIRSSFSFIAGSVFGIYVAQNYNVPNIRKLANTGLAMAKHIEENYRKPKKRDDDD 58
          MGFIRSSFSFIAGSVFGIYVAQNYNVPNIRKLANTGLAMAKHIEENYRKPKKRDDDD
Sbjct: 1  MGFIRSSFSFIAGSVFGIYVAQNYNVPNIRKLANTGLAMAKHIEENYRKPKKRDDDD 57

[Close]

BLAST of Pay0016094.1 vs. NCBI nr
Match: XP_031743909.1 (uncharacterized protein LOC101209935 [Cucumis sativus] >XP_031743910.1 uncharacterized protein LOC101209935 [Cucumis sativus])

HSP 1 Score: 114.4 bits (285), Expect = 3.3e-22
Identity = 56/57 (98.25%), Postives = 57/57 (100.00%), Query Frame = 0


Query: 1  MGFIRSSFSFIAGSVFGIYVAQNYNVPNIRKLANTGLAMAKHIEENYRKPKKRDDDD 58
          MGFIRSSFSFIAGSVFGIYVAQNYNVPNIRKLANTGLAMAKHIEENYRKPKKRDDD+
Sbjct: 1  MGFIRSSFSFIAGSVFGIYVAQNYNVPNIRKLANTGLAMAKHIEENYRKPKKRDDDE 57

[Close]

BLAST of Pay0016094.1 vs. NCBI nr
Match: XP_022132505.1 (uncharacterized protein LOC111005345 [Momordica charantia])

HSP 1 Score: 109.4 bits (272), Expect = 1.0e-20
Identity = 53/57 (92.98%), Postives = 55/57 (96.49%), Query Frame = 0


Query: 1  MGFIRSSFSFIAGSVFGIYVAQNYNVPNIRKLANTGLAMAKHIEENYRKPKKRDDDD 58
          MGFIRSSFSFIAG+V GIYVAQNYNVPNIRKLANTGL +AKHIEENYRKPKKRDDDD
Sbjct: 1  MGFIRSSFSFIAGTVLGIYVAQNYNVPNIRKLANTGLVVAKHIEENYRKPKKRDDDD 57

[Close]

BLAST of Pay0016094.1 vs. NCBI nr
Match: XP_038882745.1 (uncharacterized protein LOC120073906 [Benincasa hispida] >XP_038882746.1 uncharacterized protein LOC120073906 [Benincasa hispida] >XP_038882747.1 uncharacterized protein LOC120073906 [Benincasa hispida] >XP_038882749.1 uncharacterized protein LOC120073906 [Benincasa hispida])

HSP 1 Score: 109.4 bits (272), Expect = 1.0e-20
Identity = 53/57 (92.98%), Postives = 55/57 (96.49%), Query Frame = 0


Query: 1  MGFIRSSFSFIAGSVFGIYVAQNYNVPNIRKLANTGLAMAKHIEENYRKPKKRDDDD 58
          MGFIRSSFSFIAG+V GIYVAQNYNVPNIRKLANTGL MAKHIEENYRKPKKR+DDD
Sbjct: 1  MGFIRSSFSFIAGTVIGIYVAQNYNVPNIRKLANTGLVMAKHIEENYRKPKKREDDD 57

[Close]

BLAST of Pay0016094.1 vs. NCBI nr
Match: XP_038882750.1 (uncharacterized protein LOC120073907 [Benincasa hispida])

HSP 1 Score: 109.0 bits (271), Expect = 1.4e-20
Identity = 52/57 (91.23%), Postives = 55/57 (96.49%), Query Frame = 0


Query: 1  MGFIRSSFSFIAGSVFGIYVAQNYNVPNIRKLANTGLAMAKHIEENYRKPKKRDDDD 58
          MGFIRSSFSFI G+VFGIY+AQNYNVPNIRKLANTGL MAKHIEENYRKPKKR+DDD
Sbjct: 1  MGFIRSSFSFITGTVFGIYLAQNYNVPNIRKLANTGLVMAKHIEENYRKPKKREDDD 57

[Close]

BLAST of Pay0016094.1 vs. TAIR 10
Match: AT2G35736.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G25225.1); Has 78 Blast hits to 78 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 78; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 93.2 bits (230), Expect = 7.2e-20
Identity = 43/54 (79.63%), Postives = 47/54 (87.04%), Query Frame = 0


Query: 1  MGFIRSSFSFIAGSVFGIYVAQNYNVPNIRKLANTGLAMAKHIEENYRKPKKRD 55
          MG  RS FSFI GSVFG+Y+AQNYNVPNIRKL NTGL +AKH+EENYRKPKK D
Sbjct: 1  MGIFRSCFSFITGSVFGVYLAQNYNVPNIRKLTNTGLVVAKHVEENYRKPKKDD 54

[Close]

BLAST of Pay0016094.1 vs. TAIR 10
Match: AT2G35736.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G25225.1). )

HSP 1 Score: 93.2 bits (230), Expect = 7.2e-20
Identity = 43/54 (79.63%), Postives = 47/54 (87.04%), Query Frame = 0


Query: 1  MGFIRSSFSFIAGSVFGIYVAQNYNVPNIRKLANTGLAMAKHIEENYRKPKKRD 55
          MG  RS FSFI GSVFG+Y+AQNYNVPNIRKL NTGL +AKH+EENYRKPKK D
Sbjct: 1  MGIFRSCFSFITGSVFGVYLAQNYNVPNIRKLTNTGLVVAKHVEENYRKPKKDD 54

[Close]

BLAST of Pay0016094.1 vs. TAIR 10
Match: AT4G25225.1 (unknown protein; LOCATED IN: endomembrane system; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G35736.2); Has 78 Blast hits to 78 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 78; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 81.3 bits (199), Expect = 2.8e-16
Identity = 38/55 (69.09%), Postives = 45/55 (81.82%), Query Frame = 0


Query: 1  MGFIRSSFSFIAGSVFGIYVAQNYNVPNIRKLANTGLAMAKHIEENYRKPKKRDD 56
          MG IRSSFSFI G+V GIY+AQ YNVPNI+KL +  ++MAK +EE YRKPK RDD
Sbjct: 1  MGIIRSSFSFIMGTVCGIYIAQTYNVPNIKKLGHCAVSMAKQVEEKYRKPKSRDD 55

The following BLAST results are available for this feature:

BLAST of Pay0016094.1 vs.


Match Name	E-value	Identity	Description

BLAST of Pay0016094.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3CR66	5.4e-23	100.00	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A1S3B1N0	5.4e-23	100.00	uncharacterized protein LOC103484824 OS=Cucumis melo OX=3656 GN=LOC103484824 PE=...	[more]
A0A6J1BSM8	5.1e-21	92.98	uncharacterized protein LOC111005345 OS=Momordica charantia OX=3673 GN=LOC111005...	[more]
A0A6J1KVJ8	2.5e-20	89.47	uncharacterized protein LOC111496825 OS=Cucurbita maxima OX=3661 GN=LOC111496825...	[more]
A0A6J1HHR2	2.5e-20	89.47	uncharacterized protein LOC111463630 OS=Cucurbita moschata OX=3662 GN=LOC1114636...	[more]

BLAST of Pay0016094.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008440344.1	1.1e-22	100.00	PREDICTED: uncharacterized protein LOC103484824 [Cucumis melo] >TYK12839.1 uncha...	[more]
XP_031743909.1	3.3e-22	98.25	uncharacterized protein LOC101209935 [Cucumis sativus] >XP_031743910.1 uncharact...	[more]
XP_022132505.1	1.0e-20	92.98	uncharacterized protein LOC111005345 [Momordica charantia]	[more]
XP_038882745.1	1.0e-20	92.98	uncharacterized protein LOC120073906 [Benincasa hispida] >XP_038882746.1 unchara...	[more]
XP_038882750.1	1.4e-20	91.23	uncharacterized protein LOC120073907 [Benincasa hispida]	[more]

BLAST of Pay0016094.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G35736.1	7.2e-20	79.63	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT2G35736.2	7.2e-20	79.63	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT4G25225.1	2.8e-16	69.09	unknown protein; LOCATED IN: endomembrane system; BEST Arabidopsis thaliana prot...	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Payzawat) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR027854	Short transmembrane mitochondrial protein 1	PFAM	PF15054	DUF4535	coord: 6..50 e-value: 1.7E-24 score: 85.3
None	No IPR available	PANTHER	PTHR33528:SF14	OS07G0239500 PROTEIN	coord: 1..57
None	No IPR available	PANTHER	PTHR33528	OS07G0239500 PROTEIN	coord: 1..57

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Pay0016094	Pay0016094	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Pay0016094.1-exon	Pay0016094.1-exon-Contig00140_ERROPOS1134973:72023..72968	exon

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Pay0016094.1-three_prime_utr	Pay0016094.1-three_prime_utr-Contig00140_ERROPOS1134973:72023..72497	three_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Pay0016094.1-cds	Pay0016094.1-cds-Contig00140_ERROPOS1134973:72498..72671	CDS

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Pay0016094.1-five_prime_utr	Pay0016094.1-five_prime_utr-Contig00140_ERROPOS1134973:72672..72968	five_prime_UTR

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Pay0016094.1	Pay0016094.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane