Pay0015010.1 (mRNA) Melon (Payzawat) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.GGAAGTGAAAATTTTGAATTGATGGAAGGGCTTCCATTGCAAGCTCACTCCAATTACTTCATGTACTCTCTGCCCTCTTCGAAGCTCAAACCCAAACTTCACCATTTCAGATTTCTTTGTTCTTCTTCTTTTTCTTCACTTCCTTCTCCTGAAATCTCTACTACATCTTCTTCTTCCCTTCGGAAAGATAGCAGCGGCAAAGCTAAATTGGCAATCGCCCACGCTCAACTCAAGGACAACTGGTTGGCTTCTCTTTCCTGTCCTTTTCCCCTAGGTCACGATTTCTCCTCCAATGCTTCCTCACGTGACCGAAATGCGGCTTCCGAATGCGTTATTGGCGTCGATCCCGATGTTTCTGGTGCTGTGGCGCTCTTGAGAACCGATGAATCCATTTCTTCGGCTCAGGTAATTGGTTTCGTTATCGATATTCTTTTGTTACTTTTGTTTAAGTTTAGGGATTCCAGTGGTATGTGTTTATTCTTATGTGGATTTGTTGTTCATGTTTGGCCACTGGTTGTGTATACTTAACTGATTTTTTCATTATGATTGAGGGATTAAAAATAGTAGGTGACTAATAAGGGGGGAAAATTGAAAATCATATTTATAATTTACTTGTCTGCAAGCATGGTTGAAGTTTTTTCGTTTGCAAGACTCTGTAGTACTGTTAGTGCATAACTATATTGTTAGAAGCTTTTCAGATATGGGAAATGCTTATCCATCCAATGTAAGACTAAGTCCTGATGAAATGTTAAATCTAAGTACAAAATATGAAAGATTCATCAACTCGTCTTTCTTATGGTTACATGATTGAGGAGTAGTGGCTTTGCCAACCTCTCCATATATTTTTCTCTTTTTGACGACTATTTTTACTCTAGATTGATACAATTCTTCTTTTTTTTCGTGTTTTTAGTTTGTTAATGATGGATACAATTCAAAGGAAAAATAGTTATTACAGTTTGAATCTTTTTTAATCTTTTTTGTTTTTCAAATTGTTAGGTGTATGATTCTCCTCACGTGCAAGTACTAGTTGGTGGAAGGAGACGGAAACGGTTAGATGCTAAGTCAATTGTCCAACTTCTTCACAGCTTTAATGCTCCCATTGGTACGAATATGATTGTATTTCTGTAGGTTATTGCCTCTGAATACTTTTACATACTGTATGTCTTTACTGGGATTGGGTGTTTTATTTAATTCTCAATTGACATTAATGTTTCTGGGCATGATGACTACGATCAAACGAAAATAAATATTTGGCTGTTTATAGCCAAAATAATGGTAGAGTAATTGGGTATGTCCTTTCATCTCTCTGTCTTTCCCCAGCAAAGATTTAGAGTTTCCCTAAAGACAAAGGAAATGCTATACCCAACATATTCAGTTGCACTTCTTCACCCGAGGCTCTTTAGTTCCACACATTTGGCTGTTTATTTTTTTAAAATGTTGGTTTAGTAGGAAAGTGTATCGATATCCTTGTTCCCTTTGCTTTAATCTTCCTATTTTGATGCATACTTCTGTTTTCTTCATTTAACATACAACATGTGGGTCTGTTTTTAATGAGTTGATGATCCCAACTTTTAGGAACTACTGCATATCTGGAGCAGTCAAATCCATTTCCAAAAGATGGAAAACAGGTATGCCATTGATTTTAATTGGTGGATAGGTTGAGCTGAAACCCATGTTTTGTGTCGCATGTGTGTCTTGCGTGATCCTTTTTTTAGAAAATCTGGCTTCATTACAAGGAGGAATATAATTAGTTGGAGCATTTCTTGGATTTTTTTTTTTTTTTAATTTCTTTTCCCACTAATTTCATTTTCTTTCTCTGAAGGGGTGGTGGGGTGGAGGATTTGGCTATGGATTGTGGATTGGCGTATTAGTTGGGCTAGGATTTTCTGTTGTTCCTGTGCCACCCCTTGCGTGGAAAAACAAATTTGAGCTATCGGGAAAGGATACTTCTAAGGTCAGTTCAGCCAATTACCAACACTAGTCTAGGTAGTTGTCTCATTCATATATAGATCAAACACTTCATAATGTTCATTATCATTAGCCCTTTATTGTTATTACTGATCTCAATCTTTAGTGTGTCGTTACCAATATGTAAAAAGTTAACTATCATGAGTTGACTAGTGGTAAACAAAGGGTGTTGAGTCGAGATGTTCGAGGGTGGGGCGGGGATGGGGAAGCGGGGCAATTCCCCACCCCCATCTCCGTTAAGTCGCTTAGGGAAAATTTTCTCCCCGGTCCTTCCCCCATTCCCCATCTAATAAATATTCACCACCCCATTGGGGTCCCAACCCCGGGGTTAAATGAACATCTCTAATATTGAGTTTAATAAACGACTAAGAGAGGGGATGAGTTCAATTCATGATAGATATTACATGGATATATATATACTTAATATCTAATGAATTTCTTGACACTCAAATGTTATAGGGTTAGACAAGTTGTCTTATGAGCTTAGTTGAGGTGTACTAAGCTGGTTCACACACTCACAAGTATCTAAAATAAATAAAAAGGTCTGTTGCAGAACATGTAACGGTGGCTAAATTCTGCTTTAATTTGATGATTTATGTTCTTTGACTAGCATCCCATGTTTCATTCTGAACAAGGGGAAAGGTCTTCCAATCTTCTTATGCTAAAAACATATTTGTAGGACTGAAATAGCTGAGGGATAACAGATTCCTCCCAGAACTGAAAACAGAGCAGCCATTTATCTCAACAATGGTCTTTCTGTTTAGTTTTAAAAAACTTGACTTTTGCTGATATGTGAAGAATTATACTCGTACCACCTCTACCAAAATGGTTCCCACGGTTACTGAGCATGCCTTGTTCACTTATCATTGTAACCTCTTCTAGCCGTGGCGATCCAGAAAATTTATTGACAAGACTTGATAGTTTAATAAAAATAATATGGAAAAAAATTGAACCTACGTCTAGAGGGGTGGAGAGATAGTCTTAACACTAAACGTGAACTCTATCCTTTAATTTCTTTAATTAGTTTACCAAAGAATTGTCGGTTCTATTCGTTGTGGCAGGTCCTGCTTTTTGCGATTATTGTATGCTTTATTGTATATTTTATTATCCAGAAGTTTTCTTTCTTATACTAATTTTATTTTGAATATTTGCACCGTAGGATGACAGCCGGAGGATTGCATCCGAATTATTTCCGTCTCTAAGCCCACTCTTGAAAAGGAAAAAAGATCACGGTATTTTATTACGTATTTTATATGCTGTATGTTTCATAAGTTTGTTGATTTCCAATTTTTATATTTGAACGAGAATTTGGATAGATATCATACCTTACTAAACATACATAAATTCAGCATTTTTTTAAATACAAAATGTGGGGTAAAAGAGTCTAACTTTGATAACTAAAGTTCTATACCAATTCAACTATGTTCGTCTTGATGACATTTTAAATATGAAAGTCTTTTGTGCTTTCAACTCATCTCTACGAAGTTAGATTGAGGGTAATGATGAAGTTCCAAGGGAAACGAACACTTATTCCGTTCTGGTTTTTCATTATTTCAAAAACATGAAGTTCTTGTAAATGTACCGAACTAATATATTTCTCGTTATCAGTTGCTGGGGACTAAAACCCATAAGCTTCTCCCAAAATTTGCATCTTCATTTCATTAACAAGAAAAACAGAGTTCGGTGTGATATGATGAAAATCATTCTTTTATGCATCCCTTGAAACATTTTCGCCTTTCCTTGTGTTTGCAGGGAGGGCTGACGCTTTACTCATTGCTGCTTATGGAAAAGGCTTGAAATTGAATTCAGAAACACCATCATCGCCTTAGAGGAGTCGGTAGCTTCATAGGAATGGCAGATTGTCCTGACTTTATTCTTTCGATGAATTCAGGTTCAGGTTTGGCATTGATTTAGAATGAGTGCAAAGTGATGTATGAGAGTGATCTTCCTCATTTGATGAGTTCATTTGCTTTTGATTATTTTGATTAAGGTTTAACCATTCATTCATCTTGCTAAATTAGAAATGAGCCTTGTAGCAGTAGTAACTCAGTAACCAATTGAAATTGTTGTAGATTAGAATCTTTTATGTTATTAGAGATTGACATAATTTAACTATGTATGCAGAGAACGATCTTGGACGGG GGAAGTGAAAATTTTGAATTGATGGAAGGGCTTCCATTGCAAGCTCACTCCAATTACTTCATGTACTCTCTGCCCTCTTCGAAGCTCAAACCCAAACTTCACCATTTCAGATTTCTTTGTTCTTCTTCTTTTTCTTCACTTCCTTCTCCTGAAATCTCTACTACATCTTCTTCTTCCCTTCGGAAAGATAGCAGCGGCAAAGCTAAATTGGCAATCGCCCACGCTCAACTCAAGGACAACTGGTTGGCTTCTCTTTCCTGTCCTTTTCCCCTAGGTCACGATTTCTCCTCCAATGCTTCCTCACGTGACCGAAATGCGGCTTCCGAATGCGTTATTGGCGTCGATCCCGATGTTTCTGGTGCTGTGGCGCTCTTGAGAACCGATGAATCCATTTCTTCGGCTCAGGTGTATGATTCTCCTCACGTGCAAGTACTAGTTGGTGGAAGGAGACGGAAACGGTTAGATGCTAAGTCAATTGTCCAACTTCTTCACAGCTTTAATGCTCCCATTGGAACTACTGCATATCTGGAGCAGTCAAATCCATTTCCAAAAGATGGAAAACAGGGGTGGTGGGGTGGAGGATTTGGCTATGGATTGTGGATTGGCGTATTAGTTGGGCTAGGATTTTCTGTTGTTCCTGTGCCACCCCTTGCGTGGAAAAACAAATTTGAGCTATCGGGAAAGGATACTTCTAAGGATGACAGCCGGAGGATTGCATCCGAATTATTTCCGTCTCTAAGCCCACTCTTGAAAAGGAAAAAAGATCACGGGAGGGCTGACGCTTTACTCATTGCTGCTTATGGAAAAGGCTTGAAATTGAATTCAGAAACACCATCATCGCCTTAGAGGAGTCGGTAGCTTCATAGGAATGGCAGATTGTCCTGACTTTATTCTTTCGATGAATTCAGGTTCAGGTTTGGCATTGATTTAGAATGAGTGCAAAGTGATGTATGAGAGTGATCTTCCTCATTTGATGAGTTCATTTGCTTTTGATTATTTTGATTAAGGTTTAACCATTCATTCATCTTGCTAAATTAGAAATGAGCCTTGTAGCAGTAGTAACTCAGTAACCAATTGAAATTGTTGTAGATTAGAATCTTTTATGTTATTAGAGATTGACATAATTTAACTATGTATGCAGAGAACGATCTTGGACGGG ATGGAAGGGCTTCCATTGCAAGCTCACTCCAATTACTTCATGTACTCTCTGCCCTCTTCGAAGCTCAAACCCAAACTTCACCATTTCAGATTTCTTTGTTCTTCTTCTTTTTCTTCACTTCCTTCTCCTGAAATCTCTACTACATCTTCTTCTTCCCTTCGGAAAGATAGCAGCGGCAAAGCTAAATTGGCAATCGCCCACGCTCAACTCAAGGACAACTGGTTGGCTTCTCTTTCCTGTCCTTTTCCCCTAGGTCACGATTTCTCCTCCAATGCTTCCTCACGTGACCGAAATGCGGCTTCCGAATGCGTTATTGGCGTCGATCCCGATGTTTCTGGTGCTGTGGCGCTCTTGAGAACCGATGAATCCATTTCTTCGGCTCAGGTGTATGATTCTCCTCACGTGCAAGTACTAGTTGGTGGAAGGAGACGGAAACGGTTAGATGCTAAGTCAATTGTCCAACTTCTTCACAGCTTTAATGCTCCCATTGGAACTACTGCATATCTGGAGCAGTCAAATCCATTTCCAAAAGATGGAAAACAGGGGTGGTGGGGTGGAGGATTTGGCTATGGATTGTGGATTGGCGTATTAGTTGGGCTAGGATTTTCTGTTGTTCCTGTGCCACCCCTTGCGTGGAAAAACAAATTTGAGCTATCGGGAAAGGATACTTCTAAGGATGACAGCCGGAGGATTGCATCCGAATTATTTCCGTCTCTAAGCCCACTCTTGAAAAGGAAAAAAGATCACGGGAGGGCTGACGCTTTACTCATTGCTGCTTATGGAAAAGGCTTGAAATTGAATTCAGAAACACCATCATCGCCTTAG MEGLPLQAHSNYFMYSLPSSKLKPKLHHFRFLCSSSFSSLPSPEISTTSSSSLRKDSSGKAKLAIAHAQLKDNWLASLSCPFPLGHDFSSNASSRDRNAASECVIGVDPDVSGAVALLRTDESISSAQVYDSPHVQVLVGGRRRKRLDAKSIVQLLHSFNAPIGTTAYLEQSNPFPKDGKQGWWGGGFGYGLWIGVLVGLGFSVVPVPPLAWKNKFELSGKDTSKDDSRRIASELFPSLSPLLKRKKDHGRADALLIAAYGKGLKLNSETPSSP Homology
BLAST of Pay0015010.1 vs. ExPASy Swiss-Prot
Match: Q8GWA2 (Holliday junction resolvase MOC1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=MOC1 PE=1 SV=1) HSP 1 Score: 242.3 bits (617), Expect = 6.5e-63 Identity = 140/261 (53.64%), Postives = 169/261 (64.75%), Query Frame = 0
BLAST of Pay0015010.1 vs. ExPASy Swiss-Prot
Match: A8ITB0 (Holliday junction resolvase MOC1, chloroplastic OS=Chlamydomonas reinhardtii OX=3055 GN=MOC1 PE=3 SV=2) HSP 1 Score: 77.8 bits (190), Expect = 2.1e-13 Identity = 42/102 (41.18%), Postives = 55/102 (53.92%), Query Frame = 0
BLAST of Pay0015010.1 vs. ExPASy TrEMBL
Match: A0A5D3B8B8 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold182G00620 PE=4 SV=1) HSP 1 Score: 547.7 bits (1410), Expect = 2.7e-152 Identity = 274/274 (100.00%), Postives = 274/274 (100.00%), Query Frame = 0
BLAST of Pay0015010.1 vs. ExPASy TrEMBL
Match: A0A1S3BMH5 (uncharacterized protein LOC103491461 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103491461 PE=4 SV=1) HSP 1 Score: 547.7 bits (1410), Expect = 2.7e-152 Identity = 274/274 (100.00%), Postives = 274/274 (100.00%), Query Frame = 0
BLAST of Pay0015010.1 vs. ExPASy TrEMBL
Match: A0A0A0KH00 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G429140 PE=4 SV=1) HSP 1 Score: 508.4 bits (1308), Expect = 1.8e-140 Identity = 254/271 (93.73%), Postives = 264/271 (97.42%), Query Frame = 0
BLAST of Pay0015010.1 vs. ExPASy TrEMBL
Match: A0A6J1FUK2 (Holliday junction resolvase MOC1, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111448269 PE=4 SV=1) HSP 1 Score: 437.6 bits (1124), Expect = 3.9e-119 Identity = 226/277 (81.59%), Postives = 243/277 (87.73%), Query Frame = 0
BLAST of Pay0015010.1 vs. ExPASy TrEMBL
Match: A0A1S3BMG7 (uncharacterized protein LOC103491461 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103491461 PE=4 SV=1) HSP 1 Score: 432.2 bits (1110), Expect = 1.6e-117 Identity = 230/274 (83.94%), Postives = 230/274 (83.94%), Query Frame = 0
BLAST of Pay0015010.1 vs. NCBI nr
Match: XP_008449639.1 (PREDICTED: uncharacterized protein LOC103491461 isoform X1 [Cucumis melo] >KAA0061758.1 uncharacterized protein E6C27_scaffold212G001360 [Cucumis melo var. makuwa] >TYJ96100.1 uncharacterized protein E5676_scaffold182G00620 [Cucumis melo var. makuwa]) HSP 1 Score: 547.7 bits (1410), Expect = 5.5e-152 Identity = 274/274 (100.00%), Postives = 274/274 (100.00%), Query Frame = 0
BLAST of Pay0015010.1 vs. NCBI nr
Match: XP_004140187.1 (Holliday junction resolvase MOC1, chloroplastic [Cucumis sativus] >KGN48084.1 hypothetical protein Csa_003748 [Cucumis sativus]) HSP 1 Score: 508.4 bits (1308), Expect = 3.7e-140 Identity = 254/271 (93.73%), Postives = 264/271 (97.42%), Query Frame = 0
BLAST of Pay0015010.1 vs. NCBI nr
Match: XP_038902489.1 (Holliday junction resolvase MOC1, chloroplastic [Benincasa hispida]) HSP 1 Score: 442.2 bits (1136), Expect = 3.3e-120 Identity = 232/277 (83.75%), Postives = 243/277 (87.73%), Query Frame = 0
BLAST of Pay0015010.1 vs. NCBI nr
Match: XP_023512747.1 (Holliday junction resolvase MOC1, chloroplastic [Cucurbita pepo subsp. pepo]) HSP 1 Score: 438.0 bits (1125), Expect = 6.2e-119 Identity = 227/278 (81.65%), Postives = 243/278 (87.41%), Query Frame = 0
BLAST of Pay0015010.1 vs. NCBI nr
Match: KAG7010304.1 (hypothetical protein SDJN02_27097 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 438.0 bits (1125), Expect = 6.2e-119 Identity = 227/278 (81.65%), Postives = 243/278 (87.41%), Query Frame = 0
BLAST of Pay0015010.1 vs. TAIR 10
Match: AT2G26840.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G43910.1); Has 835 Blast hits to 835 proteins in 26 species: Archae - 0; Bacteria - 25; Metazoa - 0; Fungi - 0; Plants - 40; Viruses - 2; Other Eukaryotes - 768 (source: NCBI BLink). ) HSP 1 Score: 242.3 bits (617), Expect = 4.6e-64 Identity = 140/261 (53.64%), Postives = 169/261 (64.75%), Query Frame = 0
BLAST of Pay0015010.1 vs. TAIR 10
Match: AT2G26840.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G43910.1). ) HSP 1 Score: 218.8 bits (556), Expect = 5.5e-57 Identity = 138/314 (43.95%), Postives = 169/314 (53.82%), Query Frame = 0
BLAST of Pay0015010.1 vs. TAIR 10
Match: AT3G43910.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G26840.1); Has 680 Blast hits to 680 proteins in 17 species: Archae - 0; Bacteria - 8; Metazoa - 0; Fungi - 0; Plants - 37; Viruses - 0; Other Eukaryotes - 635 (source: NCBI BLink). ) HSP 1 Score: 100.5 bits (249), Expect = 2.2e-21 Identity = 63/159 (39.62%), Postives = 95/159 (59.75%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Melon (Payzawat) v1
Date Performed: 2021-10-25
Relationships
This mRNA is a part of the following gene feature(s):
The following five_prime_UTR feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
|