Pay0014110.1 (mRNA) Melon (Payzawat) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCCCCGCCAACTCAATCCTCATCGATTTTAGAGCTTTTCCCATTACATGAAAATGCCCTCTTCCGCCGCCATTTTACTCTCCTTTTCTTTCCTCTCCCTCCTCCTTCTTCTCGCCCACTCTCAAACCTCCTCCCCGATATCAATAGATCCTCAAAATCCCGACGCTGAGATCAAATGTGGATCATGCCCTTGTTCCAATCCATGTATTCAACAATTATCACCGCCACCGCCACCGCCTCCTTCTCCTTGTACCCCAACGGTGTCCTCTCGACCACCGCCTCCTAGGTTTATTTATACCATGTCATCACCTGCACCACCGCCTCCAAGGTTTACTTACACGACGGGTGTTCCCGGTAATTTATACGAGATTGATGCGAATAATAGCTGGTATTACTTCTCTGGCACGACGAGGACGTGGCCTGGCATGGCGGCGGTTGTGGTGGCGCTTGGCTGTGGAGCTTTGCATCTAATGGGGTTTAGTAAGTGGTGAAGGATGAATAGCCATATAAAGAAAATTATTGATTAATGTGTTGAATTTGGTCTAATTACTAAAAGAAATATTTACTCTTAGTTCATAAAGTATTAAGTATATATATGTATGCTATATGATCTTAATGATTAGATGTCTATTTATTTACCTTTTCT CTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCCCCGCCAACTCAATCCTCATCGATTTTAGAGCTTTTCCCATTACATGAAAATGCCCTCTTCCGCCGCCATTTTACTCTCCTTTTCTTTCCTCTCCCTCCTCCTTCTTCTCGCCCACTCTCAAACCTCCTCCCCGATATCAATAGATCCTCAAAATCCCGACGCTGAGATCAAATGTGGATCATGCCCTTGTTCCAATCCATGTATTCAACAATTATCACCGCCACCGCCACCGCCTCCTTCTCCTTGTACCCCAACGGTGTCCTCTCGACCACCGCCTCCTAGGTTTATTTATACCATGTCATCACCTGCACCACCGCCTCCAAGGTTTACTTACACGACGGGTGTTCCCGGTAATTTATACGAGATTGATGCGAATAATAGCTGGTATTACTTCTCTGGCACGACGAGGACGTGGCCTGGCATGGCGGCGGTTGTGGTGGCGCTTGGCTGTGGAGCTTTGCATCTAATGGGGTTTAGTAAGTGGTGAAGGATGAATAGCCATATAAAGAAAATTATTGATTAATGTGTTGAATTTGGTCTAATTACTAAAAGAAATATTTACTCTTAGTTCATAAAGTATTAAGTATATATATGTATGCTATATGATCTTAATGATTAGATGTCTATTTATTTACCTTTTCT ATGAAAATGCCCTCTTCCGCCGCCATTTTACTCTCCTTTTCTTTCCTCTCCCTCCTCCTTCTTCTCGCCCACTCTCAAACCTCCTCCCCGATATCAATAGATCCTCAAAATCCCGACGCTGAGATCAAATGTGGATCATGCCCTTGTTCCAATCCATGTATTCAACAATTATCACCGCCACCGCCACCGCCTCCTTCTCCTTGTACCCCAACGGTGTCCTCTCGACCACCGCCTCCTAGGTTTATTTATACCATGTCATCACCTGCACCACCGCCTCCAAGGTTTACTTACACGACGGGTGTTCCCGGTAATTTATACGAGATTGATGCGAATAATAGCTGGTATTACTTCTCTGGCACGACGAGGACGTGGCCTGGCATGGCGGCGGTTGTGGTGGCGCTTGGCTGTGGAGCTTTGCATCTAATGGGGTTTAGTAAGTGGTGA MKMPSSAAILLSFSFLSLLLLLAHSQTSSPISIDPQNPDAEIKCGSCPCSNPCIQQLSPPPPPPPSPCTPTVSSRPPPPRFIYTMSSPAPPPPRFTYTTGVPGNLYEIDANNSWYYFSGTTRTWPGMAAVVVALGCGALHLMGFSKW Homology
BLAST of Pay0014110.1 vs. ExPASy TrEMBL
Match: A0A5A7V4T2 (Formin-like protein 3 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold451G00500 PE=4 SV=1) HSP 1 Score: 280.0 bits (715), Expect = 5.6e-72 Identity = 143/147 (97.28%), Postives = 143/147 (97.28%), Query Frame = 0
BLAST of Pay0014110.1 vs. ExPASy TrEMBL
Match: A0A0A0L7R0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G346900 PE=4 SV=1) HSP 1 Score: 262.7 bits (670), Expect = 9.2e-67 Identity = 135/152 (88.82%), Postives = 138/152 (90.79%), Query Frame = 0
BLAST of Pay0014110.1 vs. ExPASy TrEMBL
Match: A0A6J1J7W0 (probable pathogenesis-related protein ARB_02861 OS=Cucurbita maxima OX=3661 GN=LOC111482528 PE=4 SV=1) HSP 1 Score: 199.5 bits (506), Expect = 9.6e-48 Identity = 103/145 (71.03%), Postives = 114/145 (78.62%), Query Frame = 0
BLAST of Pay0014110.1 vs. ExPASy TrEMBL
Match: A0A6J1GAW3 (leucine-rich repeat extensin-like protein 2 OS=Cucurbita moschata OX=3662 GN=LOC111452509 PE=4 SV=1) HSP 1 Score: 126.3 bits (316), Expect = 1.0e-25 Identity = 81/147 (55.10%), Postives = 87/147 (59.18%), Query Frame = 0
BLAST of Pay0014110.1 vs. ExPASy TrEMBL
Match: A0A6J1BC02 (probable pathogenesis-related protein ARB_02861 OS=Herrania umbratica OX=108875 GN=LOC110426016 PE=4 SV=1) HSP 1 Score: 102.1 bits (253), Expect = 2.1e-18 Identity = 60/110 (54.55%), Postives = 70/110 (63.64%), Query Frame = 0
BLAST of Pay0014110.1 vs. NCBI nr
Match: KAA0060761.1 (formin-like protein 3 [Cucumis melo var. makuwa] >TYK01496.1 formin-like protein 3 [Cucumis melo var. makuwa]) HSP 1 Score: 280.0 bits (715), Expect = 1.2e-71 Identity = 143/147 (97.28%), Postives = 143/147 (97.28%), Query Frame = 0
BLAST of Pay0014110.1 vs. NCBI nr
Match: XP_011651408.1 (leucine-rich repeat extensin-like protein 3 [Cucumis sativus]) HSP 1 Score: 262.7 bits (670), Expect = 1.9e-66 Identity = 135/152 (88.82%), Postives = 138/152 (90.79%), Query Frame = 0
BLAST of Pay0014110.1 vs. NCBI nr
Match: KAE8650628.1 (hypothetical protein Csa_011452 [Cucumis sativus]) HSP 1 Score: 254.6 bits (649), Expect = 5.2e-64 Identity = 132/149 (88.59%), Postives = 135/149 (90.60%), Query Frame = 0
BLAST of Pay0014110.1 vs. NCBI nr
Match: KAE8653002.1 (hypothetical protein Csa_004575 [Cucumis sativus]) HSP 1 Score: 218.4 bits (555), Expect = 4.1e-53 Identity = 114/128 (89.06%), Postives = 116/128 (90.62%), Query Frame = 0
BLAST of Pay0014110.1 vs. NCBI nr
Match: XP_022984145.1 (probable pathogenesis-related protein ARB_02861 [Cucurbita maxima]) HSP 1 Score: 199.5 bits (506), Expect = 2.0e-47 Identity = 103/145 (71.03%), Postives = 114/145 (78.62%), Query Frame = 0
BLAST of Pay0014110.1 vs. TAIR 10
Match: AT3G03350.2 (NAD(P)-binding Rossmann-fold superfamily protein ) HSP 1 Score: 58.5 bits (140), Expect = 5.1e-09 Identity = 30/71 (42.25%), Postives = 41/71 (57.75%), Query Frame = 0
BLAST of Pay0014110.1 vs. TAIR 10
Match: AT3G03350.1 (NAD(P)-binding Rossmann-fold superfamily protein ) HSP 1 Score: 52.8 bits (125), Expect = 2.8e-07 Identity = 26/53 (49.06%), Postives = 33/53 (62.26%), Query Frame = 0
BLAST of Pay0014110.1 vs. TAIR 10
Match: AT1G23040.1 (hydroxyproline-rich glycoprotein family protein ) HSP 1 Score: 52.0 bits (123), Expect = 4.8e-07 Identity = 41/105 (39.05%), Postives = 55/105 (52.38%), Query Frame = 0
BLAST of Pay0014110.1 vs. TAIR 10
Match: AT1G70990.1 (proline-rich family protein ) HSP 1 Score: 47.0 bits (110), Expect = 1.5e-05 Identity = 40/107 (37.38%), Postives = 55/107 (51.40%), Query Frame = 0
BLAST of Pay0014110.1 vs. TAIR 10
Match: AT1G02405.1 (proline-rich family protein ) HSP 1 Score: 44.3 bits (103), Expect = 9.9e-05 Identity = 39/102 (38.24%), Postives = 51/102 (50.00%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Melon (Payzawat) v1
Date Performed: 2021-10-25
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
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