Pay0012313.1 (mRNA) Melon (Payzawat) v1

Overview


Name	Pay0012313.1
Type	mRNA
Organism	Cucumis melo L. var. inodorus cv. Payzawat (Melon (Payzawat) v1)
Description	Unknown protein
Location	chr02: 237768 .. 238591 (+)
Sequence length	183
RNA-Seq Expression	Pay0012313.1
Synteny	Pay0012313.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAATCGGAAGGGAGGGGATGCTGGTGGGTTCCCAAAATCACTGATCTCTCTCCTCTCCTGTCTTCTCTCTCTTGCTTGCTGGCTTTCGTTCTTTCCTCACTTCCGATCCGCCCAGCTCTTCGATCCCACTCTGTTCCTCTCTGCTTGCAGACCCTCCTACACAAGGTAAATCTCTTCCCCTCTCCCCTTTTAGATTCGCCTATTCAATTCATTTCAATTCCACCCTACCCATGTTTGATTGCTTTGCTTTGATGTGATTCCACTTGCTTCCGACTCGGTTTCTTTATTACAATTCTTTGTTTTTACTTCTTTGCTTGTGCCAGATCTCCCTTTCTTTTCACGCAATGCTAGCTTCTATTTCATGCTCTTATTTGACTTTCCCGGAATCATTTCGACATCTTCTTTCTCTTTCAAATCTAGTTTCCCCCACTGCTATTATTTGCGTACCCAATTGACTTGTGAATTCAGTTTCAGTCATTGATTATACTTACTCGATGTCTGCCTCCTTTGAACTCTGGTTTCGGAAATTCTTCTGTCTAGCTAAAGAATCAGTTTGAACAATTACGTAGATGGAATCTGGGGGATTTTCTGGGTTGCATTTTCGTGTTCTTTATGTTTTTCCCCGCATCCCGTTCATTTTTCTATTGTAATTTAAATATGCTTTGCCGCTGAGTTAGGAGATGTCTGGCTGTTTAGTAAGATTTATGTTGTGGAAGTTCTTATTTGCGCGTCGATTGGCAATTCATCCCCCTCTTCTTTGAGAATAGTTTTGATCTTTTTCTCATTTTTCACTGTTGGCTGGACAGGTCTGCGTCATGCTAG

mRNA sequence

ATGAATCGGAAGGGAGGGGATGCTGGTGGGTTCCCAAAATCACTGATCTCTCTCCTCTCCTGTCTTCTCTCTCTTGCTTGCTGGCTTTCGTTCTTTCCTCACTTCCGATCCGCCCAGCTCTTCGATCCCACTCTGTTCCTCTCTGCTTGCAGACCCTCCTACACAAGGTCTGCGTCATGCTAG

Coding sequence (CDS)

ATGAATCGGAAGGGAGGGGATGCTGGTGGGTTCCCAAAATCACTGATCTCTCTCCTCTCCTGTCTTCTCTCTCTTGCTTGCTGGCTTTCGTTCTTTCCTCACTTCCGATCCGCCCAGCTCTTCGATCCCACTCTGTTCCTCTCTGCTTGCAGACCCTCCTACACAAGGTCTGCGTCATGCTAG

Protein sequence

MNRKGGDAGGFPKSLISLLSCLLSLACWLSFFPHFRSAQLFDPTLFLSACRPSYTRSASC

Homology

The following BLAST results are available for this feature:

BLAST of Pay0012313.1 vs.


Match Name	E-value	Identity	Description

BLAST of Pay0012313.1 vs.


Match Name	E-value	Identity	Description

BLAST of Pay0012313.1 vs.


Match Name	E-value	Identity	Description

BLAST of Pay0012313.1 vs.


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Melon (Payzawat) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PROSITE	PS51257	PROKAR_LIPOPROTEIN	coord: 1..27 score: 6.0

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Pay0012313	Pay0012313	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Pay0012313.1-exon	Pay0012313.1-exon-chr02:237768..237934	exon
Pay0012313.1-exon	Pay0012313.1-exon-chr02:238576..238591	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Pay0012313.1-cds	Pay0012313.1-cds-chr02:237768..237934	CDS
Pay0012313.1-cds	Pay0012313.1-cds-chr02:238576..238591	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Pay0012313.1	Pay0012313.1-protein	polypeptide