Pay0011939.1 (mRNA) Melon (Payzawat) v1

Overview


Name	Pay0011939.1
Type	mRNA
Organism	Cucumis melo L. var. inodorus cv. Payzawat (Melon (Payzawat) v1)
Description	auxin-responsive protein SAUR21-like
Location	chr01: 17212278 .. 17212837 (-)
Sequence length	560
RNA-Seq Expression	Pay0011939.1
Synteny	Pay0011939.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CTTGTGTATATATATAGAAGTGGATCCTAATGGACTTCTCACCACATTTCCAAACTGTTCTATCTTCCATTCAAACATAAATTGAAACAAGACTTGTAGAATCAGTATACAGTTTTCCATCATGGGTATTCGTCTGCCTGGTGTTGTTAATGCCAAAAAAATTCTCCATAGGATTCACAATTCAGATTCGATTCCAAAAGGTCACTTGGCTGTTTATGTTGGAGAAACACAGAGGAAGCGCTTTGTTGTACCTGTTTCTTACTTAAGTCATCCTTCTTTTAAGACATTGTTGAGTCAGGCTGAAGAGGAGTTTGGTTTCCATCATCCCATGGGAGGTCTCACAATTCCATGTAGAGAAGAAGCTTTCCTTAATCTCACTCAAAGTTTGAATGGCTCATGATTCTCCACGTGGCTAGATTTAGTTTAGAAAAATAGACAGAAGATTAGGGCCAACAATTTTGTCAATTCATCTTTCAGTTATTGTATAGCTCATTCTTTTGGTTTAAGGAAACTGAATAAAGAAATTACTCAATGCACATACTTTGGTTGGAAGTCCTCCC

mRNA sequence

CTTGTGTATATATATAGAAGTGGATCCTAATGGACTTCTCACCACATTTCCAAACTGTTCTATCTTCCATTCAAACATAAATTGAAACAAGACTTGTAGAATCAGTATACAGTTTTCCATCATGGGTATTCGTCTGCCTGGTGTTGTTAATGCCAAAAAAATTCTCCATAGGATTCACAATTCAGATTCGATTCCAAAAGGTCACTTGGCTGTTTATGTTGGAGAAACACAGAGGAAGCGCTTTGTTGTACCTGTTTCTTACTTAAGTCATCCTTCTTTTAAGACATTGTTGAGTCAGGCTGAAGAGGAGTTTGGTTTCCATCATCCCATGGGAGGTCTCACAATTCCATGTAGAGAAGAAGCTTTCCTTAATCTCACTCAAAGTTTGAATGGCTCATGATTCTCCACGTGGCTAGATTTAGTTTAGAAAAATAGACAGAAGATTAGGGCCAACAATTTTGTCAATTCATCTTTCAGTTATTGTATAGCTCATTCTTTTGGTTTAAGGAAACTGAATAAAGAAATTACTCAATGCACATACTTTGGTTGGAAGTCCTCCC

Coding sequence (CDS)

ATGGGTATTCGTCTGCCTGGTGTTGTTAATGCCAAAAAAATTCTCCATAGGATTCACAATTCAGATTCGATTCCAAAAGGTCACTTGGCTGTTTATGTTGGAGAAACACAGAGGAAGCGCTTTGTTGTACCTGTTTCTTACTTAAGTCATCCTTCTTTTAAGACATTGTTGAGTCAGGCTGAAGAGGAGTTTGGTTTCCATCATCCCATGGGAGGTCTCACAATTCCATGTAGAGAAGAAGCTTTCCTTAATCTCACTCAAAGTTTGAATGGCTCATGA

Protein sequence

MGIRLPGVVNAKKILHRIHNSDSIPKGHLAVYVGETQRKRFVVPVSYLSHPSFKTLLSQAEEEFGFHHPMGGLTIPCREEAFLNLTQSLNGS

Homology

[Close]

BLAST of Pay0011939.1 vs. ExPASy Swiss-Prot
Match: Q9FJF9 (Auxin-responsive protein SAUR21 OS=Arabidopsis thaliana OX=3702 GN=SAUR21 PE=2 SV=1)

HSP 1 Score: 112.8 bits (281), Expect = 2.0e-24
Identity = 52/82 (63.41%), Postives = 67/82 (81.71%), Query Frame = 0


Query: 8  VVNAKKILHRIHNSDSIPKGHLAVYVGETQRKRFVVPVSYLSHPSFKTLLSQAEEEFGFH 67
          ++ AKKIL R   + + PKG LAVYVGE+Q+KR++VP+SYLS PSF+ LLS++EEEFGF 
Sbjct: 7  LLGAKKILSR-STASAAPKGFLAVYVGESQKKRYLVPLSYLSQPSFQALLSKSEEEFGFD 66

Query: 68 HPMGGLTIPCREEAFLNLTQSL 90
          HPMGGLTIPC E+ F+N+T  L
Sbjct: 67 HPMGGLTIPCPEDTFINVTSRL 87

[Close]

BLAST of Pay0011939.1 vs. ExPASy Swiss-Prot
Match: Q9FK62 (Auxin-responsive protein SAUR24 OS=Arabidopsis thaliana OX=3702 GN=SAUR24 PE=2 SV=1)

HSP 1 Score: 112.5 bits (280), Expect = 2.6e-24
Identity = 53/83 (63.86%), Postives = 67/83 (80.72%), Query Frame = 0


Query: 8  VVNAKKILHRIHNSDS-IPKGHLAVYVGETQRKRFVVPVSYLSHPSFKTLLSQAEEEFGF 67
          ++ AKKIL R   + S  PKG LAVYVGE+Q+KR++VPVSYL+ PSF+ LLS++EEEFGF
Sbjct: 7  LLGAKKILSRSTGAGSAAPKGFLAVYVGESQKKRYLVPVSYLNQPSFQALLSKSEEEFGF 66

Query: 68 HHPMGGLTIPCREEAFLNLTQSL 90
           HPMGGLTIPC E+ F+N+T  L
Sbjct: 67 DHPMGGLTIPCPEDTFINVTSRL 89

[Close]

BLAST of Pay0011939.1 vs. ExPASy Swiss-Prot
Match: Q9FJG1 (Auxin-responsive protein SAUR19 OS=Arabidopsis thaliana OX=3702 GN=SAUR19 PE=2 SV=1)

HSP 1 Score: 111.3 bits (277), Expect = 5.8e-24
Identity = 53/83 (63.86%), Postives = 67/83 (80.72%), Query Frame = 0


Query: 8  VVNAKKILHRIHNSDS-IPKGHLAVYVGETQRKRFVVPVSYLSHPSFKTLLSQAEEEFGF 67
          ++ AKKIL R   + S  PKG LAVYVGE+Q+KR++VP+SYLS PSF+ LLS++EEEFGF
Sbjct: 7  LLGAKKILSRSTAAGSAAPKGFLAVYVGESQKKRYLVPLSYLSQPSFQALLSKSEEEFGF 66

Query: 68 HHPMGGLTIPCREEAFLNLTQSL 90
           HPMGGLTIPC E+ F+N+T  L
Sbjct: 67 AHPMGGLTIPCPEDTFINVTSRL 89

[Close]

BLAST of Pay0011939.1 vs. ExPASy Swiss-Prot
Match: Q9FJG0 (Auxin-responsive protein SAUR20 OS=Arabidopsis thaliana OX=3702 GN=SAUR20 PE=1 SV=1)

HSP 1 Score: 110.2 bits (274), Expect = 1.3e-23
Identity = 51/80 (63.75%), Postives = 66/80 (82.50%), Query Frame = 0


Query: 8  VVNAKKILHRIHNSDS-IPKGHLAVYVGETQRKRFVVPVSYLSHPSFKTLLSQAEEEFGF 67
          ++ AKKIL R   + S  PKG LAVYVGE+Q+KR++VP+SYL+ PSF+ LLS++EEEFGF
Sbjct: 7  LLGAKKILSRSTTAASAAPKGFLAVYVGESQKKRYLVPISYLNQPSFQALLSKSEEEFGF 66

Query: 68 HHPMGGLTIPCREEAFLNLT 87
           HPMGGLTIPC E+ F+N+T
Sbjct: 67 DHPMGGLTIPCPEDTFINVT 86

[Close]

BLAST of Pay0011939.1 vs. ExPASy Swiss-Prot
Match: P33081 (Auxin-induced protein 15A OS=Glycine max OX=3847 PE=2 SV=1)

HSP 1 Score: 109.8 bits (273), Expect = 1.7e-23
Identity = 55/90 (61.11%), Postives = 65/90 (72.22%), Query Frame = 0


Query: 1  MGIRLPGVVNAKKILHRIHNSDSIPKGHLAVYVGETQRKRFVVPVSYLSHPSFKTLLSQA 60
          MG RLPG+  A K       +   PKG+LAVYVGE + KRFV+PVSYL+ PSF+ LLSQA
Sbjct: 1  MGFRLPGIRKASK-------AADAPKGYLAVYVGE-KLKRFVIPVSYLNQPSFQDLLSQA 60

Query: 61 EEEFGFHHPMGGLTIPCREEAFLNLTQSLN 91
          EEEFG+ HPMGGLTIPC E+ F  +T  LN
Sbjct: 61 EEEFGYDHPMGGLTIPCSEDVFQCITSCLN 82

[Close]

BLAST of Pay0011939.1 vs. ExPASy TrEMBL
Match: A0A1S3BIQ0 (auxin-responsive protein SAUR21-like OS=Cucumis melo OX=3656 GN=LOC103490317 PE=3 SV=1)

HSP 1 Score: 193.7 bits (491), Expect = 3.3e-46
Identity = 92/92 (100.00%), Postives = 92/92 (100.00%), Query Frame = 0


Query: 1  MGIRLPGVVNAKKILHRIHNSDSIPKGHLAVYVGETQRKRFVVPVSYLSHPSFKTLLSQA 60
          MGIRLPGVVNAKKILHRIHNSDSIPKGHLAVYVGETQRKRFVVPVSYLSHPSFKTLLSQA
Sbjct: 1  MGIRLPGVVNAKKILHRIHNSDSIPKGHLAVYVGETQRKRFVVPVSYLSHPSFKTLLSQA 60

Query: 61 EEEFGFHHPMGGLTIPCREEAFLNLTQSLNGS 93
          EEEFGFHHPMGGLTIPCREEAFLNLTQSLNGS
Sbjct: 61 EEEFGFHHPMGGLTIPCREEAFLNLTQSLNGS 92

[Close]

BLAST of Pay0011939.1 vs. ExPASy TrEMBL
Match: A0A5D3CLW7 (Auxin-responsive protein SAUR21-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold106G001040 PE=3 SV=1)

HSP 1 Score: 192.2 bits (487), Expect = 9.6e-46
Identity = 91/92 (98.91%), Postives = 91/92 (98.91%), Query Frame = 0


Query: 1  MGIRLPGVVNAKKILHRIHNSDSIPKGHLAVYVGETQRKRFVVPVSYLSHPSFKTLLSQA 60
          MGIRLPGVVNAKK LHRIHNSDSIPKGHLAVYVGETQRKRFVVPVSYLSHPSFKTLLSQA
Sbjct: 1  MGIRLPGVVNAKKFLHRIHNSDSIPKGHLAVYVGETQRKRFVVPVSYLSHPSFKTLLSQA 60

Query: 61 EEEFGFHHPMGGLTIPCREEAFLNLTQSLNGS 93
          EEEFGFHHPMGGLTIPCREEAFLNLTQSLNGS
Sbjct: 61 EEEFGFHHPMGGLTIPCREEAFLNLTQSLNGS 92

[Close]

BLAST of Pay0011939.1 vs. ExPASy TrEMBL
Match: A0A0A0K2G3 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G009100 PE=3 SV=1)

HSP 1 Score: 187.6 bits (475), Expect = 2.4e-44
Identity = 89/92 (96.74%), Postives = 91/92 (98.91%), Query Frame = 0


Query: 1  MGIRLPGVVNAKKILHRIHNSDSIPKGHLAVYVGETQRKRFVVPVSYLSHPSFKTLLSQA 60
          MGIRLPGVVNAK+ILHRI NSDSIPKGHLAVYVGETQRKRFVVPVSYLSHPSF+TLLSQA
Sbjct: 1  MGIRLPGVVNAKQILHRIRNSDSIPKGHLAVYVGETQRKRFVVPVSYLSHPSFQTLLSQA 60

Query: 61 EEEFGFHHPMGGLTIPCREEAFLNLTQSLNGS 93
          EEEFGFHHPMGGLTIPCREEAFLNLTQSLNGS
Sbjct: 61 EEEFGFHHPMGGLTIPCREEAFLNLTQSLNGS 92

[Close]

BLAST of Pay0011939.1 vs. ExPASy TrEMBL
Match: A0A6J1C2U6 (auxin-induced protein X15-like OS=Momordica charantia OX=3673 GN=LOC111007946 PE=3 SV=1)

HSP 1 Score: 162.5 bits (410), Expect = 8.1e-37
Identity = 79/93 (84.95%), Postives = 83/93 (89.25%), Query Frame = 0


Query: 1  MGIRLPGVVNAKKILHRI-HNSDSIPKGHLAVYVGETQRKRFVVPVSYLSHPSFKTLLSQ 60
          MGIRLPGV NAK+IL     NSD IPKGHLAVYVGE QR+RFVVPVSYLSHPSF+ LLSQ
Sbjct: 1  MGIRLPGVANAKRILRLADRNSDVIPKGHLAVYVGEAQRRRFVVPVSYLSHPSFQKLLSQ 60

Query: 61 AEEEFGFHHPMGGLTIPCREEAFLNLTQSLNGS 93
          AEEEFGFHHPMGGLTIPCREEAF+NLT SLNGS
Sbjct: 61 AEEEFGFHHPMGGLTIPCREEAFINLTCSLNGS 93

[Close]

BLAST of Pay0011939.1 vs. ExPASy TrEMBL
Match: A0A1U8Q893 (auxin-responsive protein SAUR23-like OS=Nelumbo nucifera OX=4432 GN=LOC104607462 PE=3 SV=1)

HSP 1 Score: 142.1 bits (357), Expect = 1.1e-30
Identity = 67/96 (69.79%), Postives = 78/96 (81.25%), Query Frame = 0


Query: 1  MGIRLPGVVNAKKILHRIHNSDS-----IPKGHLAVYVGETQRKRFVVPVSYLSHPSFKT 60
          MGIRLPG+V+AK IL R   S S     +PKGH AVYVGE Q+KRF+VP+SYLSHPSF+ 
Sbjct: 1  MGIRLPGIVHAKAILRRSLISPSAPTANVPKGHFAVYVGEAQKKRFIVPISYLSHPSFQD 60

Query: 61 LLSQAEEEFGFHHPMGGLTIPCREEAFLNLTQSLNG 92
          LL QAEEEFGFHHPMGGLTIPC+E+ FL+LT  L+G
Sbjct: 61 LLGQAEEEFGFHHPMGGLTIPCKEDQFLDLTSRLSG 96

[Close]

BLAST of Pay0011939.1 vs. NCBI nr
Match: XP_008448002.1 (PREDICTED: auxin-responsive protein SAUR21-like [Cucumis melo])

HSP 1 Score: 193.7 bits (491), Expect = 6.8e-46
Identity = 92/92 (100.00%), Postives = 92/92 (100.00%), Query Frame = 0


Query: 1  MGIRLPGVVNAKKILHRIHNSDSIPKGHLAVYVGETQRKRFVVPVSYLSHPSFKTLLSQA 60
          MGIRLPGVVNAKKILHRIHNSDSIPKGHLAVYVGETQRKRFVVPVSYLSHPSFKTLLSQA
Sbjct: 1  MGIRLPGVVNAKKILHRIHNSDSIPKGHLAVYVGETQRKRFVVPVSYLSHPSFKTLLSQA 60

Query: 61 EEEFGFHHPMGGLTIPCREEAFLNLTQSLNGS 93
          EEEFGFHHPMGGLTIPCREEAFLNLTQSLNGS
Sbjct: 61 EEEFGFHHPMGGLTIPCREEAFLNLTQSLNGS 92

[Close]

BLAST of Pay0011939.1 vs. NCBI nr
Match: KAA0049711.1 (auxin-responsive protein SAUR21-like [Cucumis melo var. makuwa] >TYK12164.1 auxin-responsive protein SAUR21-like [Cucumis melo var. makuwa])

HSP 1 Score: 192.2 bits (487), Expect = 2.0e-45
Identity = 91/92 (98.91%), Postives = 91/92 (98.91%), Query Frame = 0


Query: 1  MGIRLPGVVNAKKILHRIHNSDSIPKGHLAVYVGETQRKRFVVPVSYLSHPSFKTLLSQA 60
          MGIRLPGVVNAKK LHRIHNSDSIPKGHLAVYVGETQRKRFVVPVSYLSHPSFKTLLSQA
Sbjct: 1  MGIRLPGVVNAKKFLHRIHNSDSIPKGHLAVYVGETQRKRFVVPVSYLSHPSFKTLLSQA 60

Query: 61 EEEFGFHHPMGGLTIPCREEAFLNLTQSLNGS 93
          EEEFGFHHPMGGLTIPCREEAFLNLTQSLNGS
Sbjct: 61 EEEFGFHHPMGGLTIPCREEAFLNLTQSLNGS 92

[Close]

BLAST of Pay0011939.1 vs. NCBI nr
Match: XP_004144829.1 (auxin-responsive protein SAUR21 [Cucumis sativus])

HSP 1 Score: 187.6 bits (475), Expect = 4.9e-44
Identity = 89/92 (96.74%), Postives = 91/92 (98.91%), Query Frame = 0


Query: 1  MGIRLPGVVNAKKILHRIHNSDSIPKGHLAVYVGETQRKRFVVPVSYLSHPSFKTLLSQA 60
          MGIRLPGVVNAK+ILHRI NSDSIPKGHLAVYVGETQRKRFVVPVSYLSHPSF+TLLSQA
Sbjct: 1  MGIRLPGVVNAKQILHRIRNSDSIPKGHLAVYVGETQRKRFVVPVSYLSHPSFQTLLSQA 60

Query: 61 EEEFGFHHPMGGLTIPCREEAFLNLTQSLNGS 93
          EEEFGFHHPMGGLTIPCREEAFLNLTQSLNGS
Sbjct: 61 EEEFGFHHPMGGLTIPCREEAFLNLTQSLNGS 92

[Close]

BLAST of Pay0011939.1 vs. NCBI nr
Match: XP_022136191.1 (auxin-induced protein X15-like [Momordica charantia])

HSP 1 Score: 162.5 bits (410), Expect = 1.7e-36
Identity = 79/93 (84.95%), Postives = 83/93 (89.25%), Query Frame = 0


Query: 1  MGIRLPGVVNAKKILHRI-HNSDSIPKGHLAVYVGETQRKRFVVPVSYLSHPSFKTLLSQ 60
          MGIRLPGV NAK+IL     NSD IPKGHLAVYVGE QR+RFVVPVSYLSHPSF+ LLSQ
Sbjct: 1  MGIRLPGVANAKRILRLADRNSDVIPKGHLAVYVGEAQRRRFVVPVSYLSHPSFQKLLSQ 60

Query: 61 AEEEFGFHHPMGGLTIPCREEAFLNLTQSLNGS 93
          AEEEFGFHHPMGGLTIPCREEAF+NLT SLNGS
Sbjct: 61 AEEEFGFHHPMGGLTIPCREEAFINLTCSLNGS 93

[Close]

BLAST of Pay0011939.1 vs. NCBI nr
Match: XP_019055014.1 (PREDICTED: auxin-responsive protein SAUR23-like [Nelumbo nucifera] >DAD40485.1 TPA_asm: hypothetical protein HUJ06_014808 [Nelumbo nucifera])

HSP 1 Score: 142.1 bits (357), Expect = 2.4e-30
Identity = 67/96 (69.79%), Postives = 78/96 (81.25%), Query Frame = 0


Query: 1  MGIRLPGVVNAKKILHRIHNSDS-----IPKGHLAVYVGETQRKRFVVPVSYLSHPSFKT 60
          MGIRLPG+V+AK IL R   S S     +PKGH AVYVGE Q+KRF+VP+SYLSHPSF+ 
Sbjct: 1  MGIRLPGIVHAKAILRRSLISPSAPTANVPKGHFAVYVGEAQKKRFIVPISYLSHPSFQD 60

Query: 61 LLSQAEEEFGFHHPMGGLTIPCREEAFLNLTQSLNG 92
          LL QAEEEFGFHHPMGGLTIPC+E+ FL+LT  L+G
Sbjct: 61 LLGQAEEEFGFHHPMGGLTIPCKEDQFLDLTSRLSG 96

[Close]

BLAST of Pay0011939.1 vs. TAIR 10
Match: AT4G34800.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 114.0 bits (284), Expect = 6.4e-26
Identity = 55/90 (61.11%), Postives = 69/90 (76.67%), Query Frame = 0


Query: 1  MGIRLPGVVNAKKILHRIHNSDSIPKGHLAVYVGE--TQRKRFVVPVSYLSHPSFKTLLS 60
          M IRL  V+N+K+   +      +PKGH+AVYVGE    +KRFVVP+SYL+HPSF+ LLS
Sbjct: 1  MAIRLSRVINSKQSQKQ---QSRVPKGHVAVYVGEEMESKKRFVVPISYLNHPSFQGLLS 60

Query: 61 QAEEEFGFHHPMGGLTIPCREEAFLNLTQS 89
          +AEEEFGF+HP+GGLTIPCREE F+ L  S
Sbjct: 61 RAEEEFGFNHPIGGLTIPCREETFVGLLNS 87

[Close]

BLAST of Pay0011939.1 vs. TAIR 10
Match: AT4G34810.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 112.8 bits (281), Expect = 1.4e-25
Identity = 51/72 (70.83%), Postives = 62/72 (86.11%), Query Frame = 0


Query: 20  NSDSIPKGHLAVYVG---ETQRKRFVVPVSYLSHPSFKTLLSQAEEEFGFHHPMGGLTIP 79
           +SD +PKGH+AVYVG   E ++KRFVVP+S+L+HPSFK  LS+AEEEFGF+HPMGGLTIP
Sbjct: 31  SSDHVPKGHVAVYVGEQIEMEKKRFVVPISFLNHPSFKEFLSRAEEEFGFNHPMGGLTIP 90

Query: 80  CREEAFLNLTQS 89
           CREE FL+L  S
Sbjct: 91  CREEVFLDLIAS 102

[Close]

BLAST of Pay0011939.1 vs. TAIR 10
Match: AT5G18030.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 112.8 bits (281), Expect = 1.4e-25
Identity = 52/82 (63.41%), Postives = 67/82 (81.71%), Query Frame = 0


Query: 8  VVNAKKILHRIHNSDSIPKGHLAVYVGETQRKRFVVPVSYLSHPSFKTLLSQAEEEFGFH 67
          ++ AKKIL R   + + PKG LAVYVGE+Q+KR++VP+SYLS PSF+ LLS++EEEFGF 
Sbjct: 7  LLGAKKILSR-STASAAPKGFLAVYVGESQKKRYLVPLSYLSQPSFQALLSKSEEEFGFD 66

Query: 68 HPMGGLTIPCREEAFLNLTQSL 90
          HPMGGLTIPC E+ F+N+T  L
Sbjct: 67 HPMGGLTIPCPEDTFINVTSRL 87

[Close]

BLAST of Pay0011939.1 vs. TAIR 10
Match: AT5G18080.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 112.5 bits (280), Expect = 1.9e-25
Identity = 53/83 (63.86%), Postives = 67/83 (80.72%), Query Frame = 0


Query: 8  VVNAKKILHRIHNSDS-IPKGHLAVYVGETQRKRFVVPVSYLSHPSFKTLLSQAEEEFGF 67
          ++ AKKIL R   + S  PKG LAVYVGE+Q+KR++VPVSYL+ PSF+ LLS++EEEFGF
Sbjct: 7  LLGAKKILSRSTGAGSAAPKGFLAVYVGESQKKRYLVPVSYLNQPSFQALLSKSEEEFGF 66

Query: 68 HHPMGGLTIPCREEAFLNLTQSL 90
           HPMGGLTIPC E+ F+N+T  L
Sbjct: 67 DHPMGGLTIPCPEDTFINVTSRL 89

[Close]

BLAST of Pay0011939.1 vs. TAIR 10
Match: AT4G34770.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 112.1 bits (279), Expect = 2.4e-25
Identity = 57/104 (54.81%), Postives = 72/104 (69.23%), Query Frame = 0


Query: 1   MGIRLPGVVNAKKILHR-----------IHNSDSIPKGHLAVYVGET-QRKRFVVPVSYL 60
           MGI+L G+  AK+ L R              ++++PKGH+AVYVGET  RKRFV+P+SYL
Sbjct: 1   MGIQLIGLSQAKQKLQRSLSARIASLLATSGTNNVPKGHVAVYVGETYHRKRFVIPISYL 60

Query: 61  SHPSFKTLLSQAEEEFGFHHPMGGLTIPCREEAFLNLTQSLNGS 93
           +HP F+ LL+ AEEEFGF HPMGGLTIPC E+ F  L   L+GS
Sbjct: 61  NHPLFQGLLNLAEEEFGFDHPMGGLTIPCTEDYFTALASILSGS 104

The following BLAST results are available for this feature:

BLAST of Pay0011939.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FJF9	2.0e-24	63.41	Auxin-responsive protein SAUR21 OS=Arabidopsis thaliana OX=3702 GN=SAUR21 PE=2 S...	[more]
Q9FK62	2.6e-24	63.86	Auxin-responsive protein SAUR24 OS=Arabidopsis thaliana OX=3702 GN=SAUR24 PE=2 S...	[more]
Q9FJG1	5.8e-24	63.86	Auxin-responsive protein SAUR19 OS=Arabidopsis thaliana OX=3702 GN=SAUR19 PE=2 S...	[more]
Q9FJG0	1.3e-23	63.75	Auxin-responsive protein SAUR20 OS=Arabidopsis thaliana OX=3702 GN=SAUR20 PE=1 S...	[more]
P33081	1.7e-23	61.11	Auxin-induced protein 15A OS=Glycine max OX=3847 PE=2 SV=1	[more]

BLAST of Pay0011939.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3BIQ0	3.3e-46	100.00	auxin-responsive protein SAUR21-like OS=Cucumis melo OX=3656 GN=LOC103490317 PE=...	[more]
A0A5D3CLW7	9.6e-46	98.91	Auxin-responsive protein SAUR21-like OS=Cucumis melo var. makuwa OX=1194695 GN=E...	[more]
A0A0A0K2G3	2.4e-44	96.74	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G009100 PE=3 SV=1	[more]
A0A6J1C2U6	8.1e-37	84.95	auxin-induced protein X15-like OS=Momordica charantia OX=3673 GN=LOC111007946 PE...	[more]
A0A1U8Q893	1.1e-30	69.79	auxin-responsive protein SAUR23-like OS=Nelumbo nucifera OX=4432 GN=LOC104607462...	[more]

BLAST of Pay0011939.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008448002.1	6.8e-46	100.00	PREDICTED: auxin-responsive protein SAUR21-like [Cucumis melo]	[more]
KAA0049711.1	2.0e-45	98.91	auxin-responsive protein SAUR21-like [Cucumis melo var. makuwa] >TYK12164.1 auxi...	[more]
XP_004144829.1	4.9e-44	96.74	auxin-responsive protein SAUR21 [Cucumis sativus]	[more]
XP_022136191.1	1.7e-36	84.95	auxin-induced protein X15-like [Momordica charantia]	[more]
XP_019055014.1	2.4e-30	69.79	PREDICTED: auxin-responsive protein SAUR23-like [Nelumbo nucifera] >DAD40485.1 T...	[more]

BLAST of Pay0011939.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G34800.1	6.4e-26	61.11	SAUR-like auxin-responsive protein family	[more]
AT4G34810.1	1.4e-25	70.83	SAUR-like auxin-responsive protein family	[more]
AT5G18030.1	1.4e-25	63.41	SAUR-like auxin-responsive protein family	[more]
AT5G18080.1	1.9e-25	63.86	SAUR-like auxin-responsive protein family	[more]
AT4G34770.1	2.4e-25	54.81	SAUR-like auxin-responsive protein family	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Payzawat) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003676	Small auxin-up RNA	PFAM	PF02519	Auxin_inducible	coord: 19..88 e-value: 6.0E-25 score: 87.2
None	No IPR available	PANTHER	PTHR31929	SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED	coord: 1..90
None	No IPR available	PANTHER	PTHR31929:SF93	SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY	coord: 1..90

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Pay0011939	Pay0011939	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Pay0011939.1-exon	Pay0011939.1-exon-chr01:17212278..17212837	exon

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Pay0011939.1-three_prime_utr	Pay0011939.1-three_prime_utr-chr01:17212278..17212437	three_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Pay0011939.1-cds	Pay0011939.1-cds-chr01:17212438..17212716	CDS

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Pay0011939.1-five_prime_utr	Pay0011939.1-five_prime_utr-chr01:17212717..17212837	five_prime_UTR

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Pay0011939.1	Pay0011939.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009733	response to auxin