Pay0011715.1 (mRNA) Melon (Payzawat) v1

Overview


Name	Pay0011715.1
Type	mRNA
Organism	Cucumis melo L. var. inodorus cv. Payzawat (Melon (Payzawat) v1)
Description	Plant transposase
Location	chr06: 9754366 .. 9755065 (+)
Sequence length	438
RNA-Seq Expression	Pay0011715.1
Synteny	Pay0011715.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexonpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAGGAAGAAATGGTAGAAATGAAAACAATGAAAGATGAAATGATCGAAATGAAAGCACTTATGTTATCTTATTTAAAGAAACAGGTATTTCTTTTTTTCTTTTACTAACTTAGATTCTTTTTTTTCTCGTAGTAGTTAACTATATTTTTGGTTTCATATGTGATTATCATAGACTGAACCAAGTGAGGAACTTTCAAATGCTACTGCAAGTGTGCTTAAGCGACTAAATATTCCTCCAATGCCTTCTCCATCGGTAAATTTATTTGTAATAGGATGAAAATTGTTTATGATGTCATTATCTTCTTATTCTAGTATCTCATATTTGTCTTTTCACAGAGTATCAATAACAACAGTCAAACTAAGTGCAAGTTATTAGATTGGTATGGCTCGGGAGAGATTGTTGCTGAAGGAAGATGGTCTTCTAATGATCCAACTGCTATGGTCCATCATATTCCTATTGGTCCACATGCAATTAGAGTATGGATTGATGTAGCAAAGAAACCAAACGCATATTTGTGGAGGCCAACATCAGAAATGACATGTATTGAAGAAGCTTTGGGAAGTACAGTTGTATGGCCATCTGATAAAGTGATCATTAGTATGTTGTCTAATTCTAATATTTTTTGTCTACATTTTTTAAAGATTTTCTATACTTGTTTAATTAATATATGTTTTACAAATTTATGTAGGTGAATGA

mRNA sequence

ATGAAGGAAGAAATGGTAGAAATGAAAACAATGAAAGATGAAATGATCGAAATGAAAGCACTTATGTTATCTTATTTAAAGAAACAGACTGAACCAAGTGAGGAACTTTCAAATGCTACTGCAAGTGTGCTTAAGCGACTAAATATTCCTCCAATGCCTTCTCCATCGAGTATCAATAACAACAGTCAAACTAAGTGCAAGTTATTAGATTGGTATGGCTCGGGAGAGATTGTTGCTGAAGGAAGATGGTCTTCTAATGATCCAACTGCTATGGTCCATCATATTCCTATTGGTCCACATGCAATTAGAGTATGGATTGATGTAGCAAAGAAACCAAACGCATATTTGTGGAGGCCAACATCAGAAATGACATGTATTGAAGAAGCTTTGGGAAGTACAGTTGTATGGCCATCTGATAAAGTGATCATTAGTGAATGA

Coding sequence (CDS)

ATGAAGGAAGAAATGGTAGAAATGAAAACAATGAAAGATGAAATGATCGAAATGAAAGCACTTATGTTATCTTATTTAAAGAAACAGACTGAACCAAGTGAGGAACTTTCAAATGCTACTGCAAGTGTGCTTAAGCGACTAAATATTCCTCCAATGCCTTCTCCATCGAGTATCAATAACAACAGTCAAACTAAGTGCAAGTTATTAGATTGGTATGGCTCGGGAGAGATTGTTGCTGAAGGAAGATGGTCTTCTAATGATCCAACTGCTATGGTCCATCATATTCCTATTGGTCCACATGCAATTAGAGTATGGATTGATGTAGCAAAGAAACCAAACGCATATTTGTGGAGGCCAACATCAGAAATGACATGTATTGAAGAAGCTTTGGGAAGTACAGTTGTATGGCCATCTGATAAAGTGATCATTAGTGAATGA

Protein sequence

MKEEMVEMKTMKDEMIEMKALMLSYLKKQTEPSEELSNATASVLKRLNIPPMPSPSSINNNSQTKCKLLDWYGSGEIVAEGRWSSNDPTAMVHHIPIGPHAIRVWIDVAKKPNAYLWRPTSEMTCIEEALGSTVVWPSDKVIISE

Homology

[Close]

BLAST of Pay0011715.1 vs. ExPASy TrEMBL
Match: A0A5D3DCM2 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1702G00300 PE=4 SV=1)

HSP 1 Score: 292.4 bits (747), Expect = 1.1e-75
Identity = 144/145 (99.31%), Postives = 144/145 (99.31%), Query Frame = 0


Query: 1    MKEEMVEMKTMKDEMIEMKALMLSYLKKQTEPSEELSNATASVLKRLNIPPMPSPSSINN 60
            MKEEMVEMKTMKDEMIEMKALMLSYLKKQTEPSEELSNATASVLKRLNIPPMPSPSSINN
Sbjct: 1187 MKEEMVEMKTMKDEMIEMKALMLSYLKKQTEPSEELSNATASVLKRLNIPPMPSPSSINN 1246

Query: 61   NSQTKCKLLDWYGSGEIVAEGRWSSNDPTAMVHHIPIGPHAIRVWIDVAKKPNAYLWRPT 120
            NSQTKCKLLDWYGSGEIVAEGRWSSNDPTAMVHHIPIGPHAIRVWIDVAKKPNAYLWRPT
Sbjct: 1247 NSQTKCKLLDWYGSGEIVAEGRWSSNDPTAMVHHIPIGPHAIRVWIDVAKKPNAYLWRPT 1306

Query: 121  SEMTCIEEALGSTVVWPSDKVIISE 146
            SEMTCIEEALGSTV WPSDKVIISE
Sbjct: 1307 SEMTCIEEALGSTVAWPSDKVIISE 1331

[Close]

BLAST of Pay0011715.1 vs. ExPASy TrEMBL
Match: A0A5A7T672 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold86G00660 PE=4 SV=1)

HSP 1 Score: 292.4 bits (747), Expect = 1.1e-75
Identity = 144/145 (99.31%), Postives = 144/145 (99.31%), Query Frame = 0


Query: 1    MKEEMVEMKTMKDEMIEMKALMLSYLKKQTEPSEELSNATASVLKRLNIPPMPSPSSINN 60
            MKEEMVEMKTMKDEMIEMKALMLSYLKKQTEPSEELSNATASVLKRLNIPPMPSPSSINN
Sbjct: 1224 MKEEMVEMKTMKDEMIEMKALMLSYLKKQTEPSEELSNATASVLKRLNIPPMPSPSSINN 1283

Query: 61   NSQTKCKLLDWYGSGEIVAEGRWSSNDPTAMVHHIPIGPHAIRVWIDVAKKPNAYLWRPT 120
            NSQTKCKLLDWYGSGEIVAEGRWSSNDPTAMVHHIPIGPHAIRVWIDVAKKPNAYLWRPT
Sbjct: 1284 NSQTKCKLLDWYGSGEIVAEGRWSSNDPTAMVHHIPIGPHAIRVWIDVAKKPNAYLWRPT 1343

Query: 121  SEMTCIEEALGSTVVWPSDKVIISE 146
            SEMTCIEEALGSTV WPSDKVIISE
Sbjct: 1344 SEMTCIEEALGSTVAWPSDKVIISE 1368

[Close]

BLAST of Pay0011715.1 vs. ExPASy TrEMBL
Match: A0A5D3DQI7 (Plant transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold190G00150 PE=4 SV=1)

HSP 1 Score: 292.4 bits (747), Expect = 1.1e-75
Identity = 144/145 (99.31%), Postives = 144/145 (99.31%), Query Frame = 0


Query: 1   MKEEMVEMKTMKDEMIEMKALMLSYLKKQTEPSEELSNATASVLKRLNIPPMPSPSSINN 60
           MKEEMVEMKTMKDEMIEMKALMLSYLKKQTEPSEELSNATASVLKRLNIPPMPSPSSINN
Sbjct: 183 MKEEMVEMKTMKDEMIEMKALMLSYLKKQTEPSEELSNATASVLKRLNIPPMPSPSSINN 242

Query: 61  NSQTKCKLLDWYGSGEIVAEGRWSSNDPTAMVHHIPIGPHAIRVWIDVAKKPNAYLWRPT 120
           NSQTKCKLLDWYGSGEIVAEGRWSSNDPTAMVHHIPIGPHAIRVWIDVAKKPNAYLWRPT
Sbjct: 243 NSQTKCKLLDWYGSGEIVAEGRWSSNDPTAMVHHIPIGPHAIRVWIDVAKKPNAYLWRPT 302

Query: 121 SEMTCIEEALGSTVVWPSDKVIISE 146
           SEMTCIEEALGSTV WPSDKVIISE
Sbjct: 303 SEMTCIEEALGSTVAWPSDKVIISE 327

[Close]

BLAST of Pay0011715.1 vs. ExPASy TrEMBL
Match: A0A5D3C984 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold654G00690 PE=4 SV=1)

HSP 1 Score: 292.4 bits (747), Expect = 1.1e-75
Identity = 144/145 (99.31%), Postives = 144/145 (99.31%), Query Frame = 0


Query: 1    MKEEMVEMKTMKDEMIEMKALMLSYLKKQTEPSEELSNATASVLKRLNIPPMPSPSSINN 60
            MKEEMVEMKTMKDEMIEMKALMLSYLKKQTEPSEELSNATASVLKRLNIPPMPSPSSINN
Sbjct: 1252 MKEEMVEMKTMKDEMIEMKALMLSYLKKQTEPSEELSNATASVLKRLNIPPMPSPSSINN 1311

Query: 61   NSQTKCKLLDWYGSGEIVAEGRWSSNDPTAMVHHIPIGPHAIRVWIDVAKKPNAYLWRPT 120
            NSQTKCKLLDWYGSGEIVAEGRWSSNDPTAMVHHIPIGPHAIRVWIDVAKKPNAYLWRPT
Sbjct: 1312 NSQTKCKLLDWYGSGEIVAEGRWSSNDPTAMVHHIPIGPHAIRVWIDVAKKPNAYLWRPT 1371

Query: 121  SEMTCIEEALGSTVVWPSDKVIISE 146
            SEMTCIEEALGSTV WPSDKVIISE
Sbjct: 1372 SEMTCIEEALGSTVAWPSDKVIISE 1396

[Close]

BLAST of Pay0011715.1 vs. ExPASy TrEMBL
Match: A0A5D3DAM7 (Transposase_23 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold132G00420 PE=4 SV=1)

HSP 1 Score: 290.8 bits (743), Expect = 3.1e-75
Identity = 143/145 (98.62%), Postives = 143/145 (98.62%), Query Frame = 0


Query: 1   MKEEMVEMKTMKDEMIEMKALMLSYLKKQTEPSEELSNATASVLKRLNIPPMPSPSSINN 60
           MKEEMVEMKTMKDEMIEMKALMLSYLKKQTEPSEELSNAT SVLKRLNIPPMPSPSSINN
Sbjct: 1   MKEEMVEMKTMKDEMIEMKALMLSYLKKQTEPSEELSNATVSVLKRLNIPPMPSPSSINN 60

Query: 61  NSQTKCKLLDWYGSGEIVAEGRWSSNDPTAMVHHIPIGPHAIRVWIDVAKKPNAYLWRPT 120
           NSQTKCKLLDWYGSGEIVAEGRWSSNDPTAMVHHIPIGPHAIRVWIDVAKKPNAYLWRPT
Sbjct: 61  NSQTKCKLLDWYGSGEIVAEGRWSSNDPTAMVHHIPIGPHAIRVWIDVAKKPNAYLWRPT 120

Query: 121 SEMTCIEEALGSTVVWPSDKVIISE 146
           SEMTCIEEALGSTV WPSDKVIISE
Sbjct: 121 SEMTCIEEALGSTVAWPSDKVIISE 145

[Close]

BLAST of Pay0011715.1 vs. NCBI nr
Match: TYK07512.1 (uncharacterized protein E5676_scaffold1702G00300 [Cucumis melo var. makuwa] >TYK21220.1 uncharacterized protein E5676_scaffold359G00290 [Cucumis melo var. makuwa])

HSP 1 Score: 292.4 bits (747), Expect = 2.2e-75
Identity = 144/145 (99.31%), Postives = 144/145 (99.31%), Query Frame = 0


Query: 1    MKEEMVEMKTMKDEMIEMKALMLSYLKKQTEPSEELSNATASVLKRLNIPPMPSPSSINN 60
            MKEEMVEMKTMKDEMIEMKALMLSYLKKQTEPSEELSNATASVLKRLNIPPMPSPSSINN
Sbjct: 1187 MKEEMVEMKTMKDEMIEMKALMLSYLKKQTEPSEELSNATASVLKRLNIPPMPSPSSINN 1246

Query: 61   NSQTKCKLLDWYGSGEIVAEGRWSSNDPTAMVHHIPIGPHAIRVWIDVAKKPNAYLWRPT 120
            NSQTKCKLLDWYGSGEIVAEGRWSSNDPTAMVHHIPIGPHAIRVWIDVAKKPNAYLWRPT
Sbjct: 1247 NSQTKCKLLDWYGSGEIVAEGRWSSNDPTAMVHHIPIGPHAIRVWIDVAKKPNAYLWRPT 1306

Query: 121  SEMTCIEEALGSTVVWPSDKVIISE 146
            SEMTCIEEALGSTV WPSDKVIISE
Sbjct: 1307 SEMTCIEEALGSTVAWPSDKVIISE 1331

[Close]

BLAST of Pay0011715.1 vs. NCBI nr
Match: KAA0036985.1 (uncharacterized protein E6C27_scaffold86G00660 [Cucumis melo var. makuwa])

HSP 1 Score: 292.4 bits (747), Expect = 2.2e-75
Identity = 144/145 (99.31%), Postives = 144/145 (99.31%), Query Frame = 0


Query: 1    MKEEMVEMKTMKDEMIEMKALMLSYLKKQTEPSEELSNATASVLKRLNIPPMPSPSSINN 60
            MKEEMVEMKTMKDEMIEMKALMLSYLKKQTEPSEELSNATASVLKRLNIPPMPSPSSINN
Sbjct: 1224 MKEEMVEMKTMKDEMIEMKALMLSYLKKQTEPSEELSNATASVLKRLNIPPMPSPSSINN 1283

Query: 61   NSQTKCKLLDWYGSGEIVAEGRWSSNDPTAMVHHIPIGPHAIRVWIDVAKKPNAYLWRPT 120
            NSQTKCKLLDWYGSGEIVAEGRWSSNDPTAMVHHIPIGPHAIRVWIDVAKKPNAYLWRPT
Sbjct: 1284 NSQTKCKLLDWYGSGEIVAEGRWSSNDPTAMVHHIPIGPHAIRVWIDVAKKPNAYLWRPT 1343

Query: 121  SEMTCIEEALGSTVVWPSDKVIISE 146
            SEMTCIEEALGSTV WPSDKVIISE
Sbjct: 1344 SEMTCIEEALGSTVAWPSDKVIISE 1368

[Close]

BLAST of Pay0011715.1 vs. NCBI nr
Match: TYK08453.1 (uncharacterized protein E5676_scaffold654G00690 [Cucumis melo var. makuwa])

HSP 1 Score: 292.4 bits (747), Expect = 2.2e-75
Identity = 144/145 (99.31%), Postives = 144/145 (99.31%), Query Frame = 0


Query: 1    MKEEMVEMKTMKDEMIEMKALMLSYLKKQTEPSEELSNATASVLKRLNIPPMPSPSSINN 60
            MKEEMVEMKTMKDEMIEMKALMLSYLKKQTEPSEELSNATASVLKRLNIPPMPSPSSINN
Sbjct: 1252 MKEEMVEMKTMKDEMIEMKALMLSYLKKQTEPSEELSNATASVLKRLNIPPMPSPSSINN 1311

Query: 61   NSQTKCKLLDWYGSGEIVAEGRWSSNDPTAMVHHIPIGPHAIRVWIDVAKKPNAYLWRPT 120
            NSQTKCKLLDWYGSGEIVAEGRWSSNDPTAMVHHIPIGPHAIRVWIDVAKKPNAYLWRPT
Sbjct: 1312 NSQTKCKLLDWYGSGEIVAEGRWSSNDPTAMVHHIPIGPHAIRVWIDVAKKPNAYLWRPT 1371

Query: 121  SEMTCIEEALGSTVVWPSDKVIISE 146
            SEMTCIEEALGSTV WPSDKVIISE
Sbjct: 1372 SEMTCIEEALGSTVAWPSDKVIISE 1396

[Close]

BLAST of Pay0011715.1 vs. NCBI nr
Match: TYK25923.1 (Plant transposase [Cucumis melo var. makuwa])

HSP 1 Score: 292.4 bits (747), Expect = 2.2e-75
Identity = 144/145 (99.31%), Postives = 144/145 (99.31%), Query Frame = 0


Query: 1   MKEEMVEMKTMKDEMIEMKALMLSYLKKQTEPSEELSNATASVLKRLNIPPMPSPSSINN 60
           MKEEMVEMKTMKDEMIEMKALMLSYLKKQTEPSEELSNATASVLKRLNIPPMPSPSSINN
Sbjct: 183 MKEEMVEMKTMKDEMIEMKALMLSYLKKQTEPSEELSNATASVLKRLNIPPMPSPSSINN 242

Query: 61  NSQTKCKLLDWYGSGEIVAEGRWSSNDPTAMVHHIPIGPHAIRVWIDVAKKPNAYLWRPT 120
           NSQTKCKLLDWYGSGEIVAEGRWSSNDPTAMVHHIPIGPHAIRVWIDVAKKPNAYLWRPT
Sbjct: 243 NSQTKCKLLDWYGSGEIVAEGRWSSNDPTAMVHHIPIGPHAIRVWIDVAKKPNAYLWRPT 302

Query: 121 SEMTCIEEALGSTVVWPSDKVIISE 146
           SEMTCIEEALGSTV WPSDKVIISE
Sbjct: 303 SEMTCIEEALGSTVAWPSDKVIISE 327

[Close]

BLAST of Pay0011715.1 vs. NCBI nr
Match: TYK20615.1 (uncharacterized protein E5676_scaffold132G00420 [Cucumis melo var. makuwa])

HSP 1 Score: 290.8 bits (743), Expect = 6.5e-75
Identity = 143/145 (98.62%), Postives = 143/145 (98.62%), Query Frame = 0


Query: 1   MKEEMVEMKTMKDEMIEMKALMLSYLKKQTEPSEELSNATASVLKRLNIPPMPSPSSINN 60
           MKEEMVEMKTMKDEMIEMKALMLSYLKKQTEPSEELSNAT SVLKRLNIPPMPSPSSINN
Sbjct: 1   MKEEMVEMKTMKDEMIEMKALMLSYLKKQTEPSEELSNATVSVLKRLNIPPMPSPSSINN 60

Query: 61  NSQTKCKLLDWYGSGEIVAEGRWSSNDPTAMVHHIPIGPHAIRVWIDVAKKPNAYLWRPT 120
           NSQTKCKLLDWYGSGEIVAEGRWSSNDPTAMVHHIPIGPHAIRVWIDVAKKPNAYLWRPT
Sbjct: 61  NSQTKCKLLDWYGSGEIVAEGRWSSNDPTAMVHHIPIGPHAIRVWIDVAKKPNAYLWRPT 120

Query: 121 SEMTCIEEALGSTVVWPSDKVIISE 146
           SEMTCIEEALGSTV WPSDKVIISE
Sbjct: 121 SEMTCIEEALGSTVAWPSDKVIISE 145

The following BLAST results are available for this feature:

BLAST of Pay0011715.1 vs.


Match Name	E-value	Identity	Description

BLAST of Pay0011715.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3DCM2	1.1e-75	99.31	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A5A7T672	1.1e-75	99.31	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]
A0A5D3DQI7	1.1e-75	99.31	Plant transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold190G00...	[more]
A0A5D3C984	1.1e-75	99.31	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A5D3DAM7	3.1e-75	98.62	Transposase_23 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 ...	[more]

BLAST of Pay0011715.1 vs. NCBI nr


Match Name	E-value	Identity	Description
TYK07512.1	2.2e-75	99.31	uncharacterized protein E5676_scaffold1702G00300 [Cucumis melo var. makuwa] >TYK...	[more]
KAA0036985.1	2.2e-75	99.31	uncharacterized protein E6C27_scaffold86G00660 [Cucumis melo var. makuwa]	[more]
TYK08453.1	2.2e-75	99.31	uncharacterized protein E5676_scaffold654G00690 [Cucumis melo var. makuwa]	[more]
TYK25923.1	2.2e-75	99.31	Plant transposase [Cucumis melo var. makuwa]	[more]
TYK20615.1	6.5e-75	98.62	uncharacterized protein E5676_scaffold132G00420 [Cucumis melo var. makuwa]	[more]

BLAST of Pay0011715.1 vs. NCBI nr


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Melon (Payzawat) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR004264	Transposase, Tnp1/En/Spm-like	PFAM	PF03017	Transposase_23	coord: 68..130 e-value: 9.3E-5 score: 22.3

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Pay0011715	Pay0011715	gene

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Pay0011715.1-cds	Pay0011715.1-cds-chr06:9754366..9754452	CDS
Pay0011715.1-cds	Pay0011715.1-cds-chr06:9754541..9754621	CDS
Pay0011715.1-cds	Pay0011715.1-cds-chr06:9754705..9754966	CDS
Pay0011715.1-cds	Pay0011715.1-cds-chr06:9755058..9755065	CDS

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Pay0011715.1-exon	Pay0011715.1-exon-chr06:9754366..9754452	exon
Pay0011715.1-exon	Pay0011715.1-exon-chr06:9754541..9754621	exon
Pay0011715.1-exon	Pay0011715.1-exon-chr06:9754705..9754966	exon
Pay0011715.1-exon	Pay0011715.1-exon-chr06:9755058..9755065	exon

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Pay0011715.1	Pay0011715.1-protein	polypeptide