Pay0009216.1 (mRNA) Melon (Payzawat) v1

Overview


Name	Pay0009216.1
Type	mRNA
Organism	Cucumis melo L. var. inodorus cv. Payzawat (Melon (Payzawat) v1)
Description	Signal recognition particle protein
Location	chr08: 6013824 .. 6020148 (+)
Sequence length	2306
RNA-Seq Expression	Pay0009216.1
Synteny	Pay0009216.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ACACTTAGACTTGGGGGAGCTAAGAGAAAATCGTCGAATTTGGCAATGGAGGGATTGCAAATTTCGACTGTTGCTTCTCGTCATTTGAATTCGAATTCTCAATCTAACTGTGCAAGTAGAGGCTTGTGCCATGGTTCCAACTGCGCGAGAAAATCCTTGAGTATTTCATCTTCTTGGCTTGGTTCGAGCAATTTGAAGTCGCTCTCTTCGAGGAATTTGTTCACAGTAAGACAGTGATTGAGTTAGTAATTGCGTATTTGAGTTACTTTCTGATTGTTGCCTTGAAATTATAGCGATTTTGAGGAAGAATTTTGTGTAGTTTAACGAATTAGTGCTAAAATTTTGTTACTCCATCCGATTAGAAATATTGTTCTGGATGTATGATAACAGAGATATTGTGATTATTTCAAGTTGTAAATTGCTTGTTGAGGGGAAATTTGGGAAAATAAGGCCTTCTTATCTTTCACTGGTAGACGTTAGTCTTGCTACCATTTGTGTCAATTGGAGAGGATTCTTGAATGTTTTGCTATTTACTATTGAATGCAAATAATACTTTCTCAGGTTCCTTAGGTTTGGTTTTGATTTTTTCCACAGAGGGAGATTTGGGGTTGGCTTCATGCCAAGACTGCTAACACTAGGAGAGATATGCGTGGGGTTGTACGAGCTGAAATGTTCGGCCAGTTGACAAGTGGCCTGGAGGCTGCTTGGAACAAGCTCAAAGGAGAAGGTCTGAATATCTTTAATCCTTTTGATCGGTTTCCTTATTTTTAAGTCTGTTATATACCCGCACTATACTTGGGTAATCGTTGGTGTACTTTGATATTGGTTTTATAATAAAACATAGATGAGAAATAGATGTTCAAGATTTTCTAAATACATCAGATGGCAATTTGCATAATGCTCTTGTACTGGAAGTACCTTAACTGGTAAGTGATACCTCTCTTATGAGTACTTTCACCACTGATTGGATCGGGGTGGGGTGGTGGTTGGGTGCTGTGGAGTGGGGTGGGAGGGGGAGCTTTCCCTTCTAATATGGACTTAATGGAGGCATTCAGGGAAACTATACACATTTCATTTTTAGGCTACATCAAACCTGTTCAAATTCAGAGGAACTAATGTGTTCAACCGGAGCACTTAATTATATTCCTTGAAATGTGATCTGATAACAGCTGATATTTAGAAAATTCATTTTGTTGATGGAACATTATCTTCCTCTAGAGGTTTTGACGAAGGAAAATATTGTGGAGCCAATGCGAGATATTAGGAGAGCTCTTCTGGAGGCTGATGTAAGTAACTGCTACATTATTCTTATATCAGTGCTTAGGTACAAAATAAGGATTTTTGGGTCCTGCTTGGTTAATATAGGTAAGCCTTCCTGTTGTACGAAGGTTTGTGCAAGCTGTTAGTGACCAAGCTGTTGGTGTTGGTGTGATTCGAGGAGTGAGACCTGATCAACAATTGGTTAAGGTATATAAGCTACCATGAGTTTTACCTTCATATTCTCACTTAATCCTTCAGTTACAAATGTACATGTGGACTTGGTTATTTCTCAGAAATTAACAGTCGCTTAAAGTTGCAATACTATTAGTAGTAGTATGTGAATACTATCAAATCAAACACGATGTTCTTTTTTATATATGTGTTGCTTTTGACGGATTTGAGGAAGTCTCCTTGGGGTAAACAAGAGTAAACATGGAAAATATTACATCTTGAGTCTGCATTGAGCCGAGGTCTGGGATCGTCTTTTGTTGTTTACATTAGCACTTGTATTAATTTTTTTAAAAAACATTAGCATTAATTTTCAACTGTTCATTGTTAACTTAAGCGTAAAAGCTATCTTACTAGTGCGTATAACTTCATGTTGCATGGTTTCATATCTTTTATGTTACATTTTTCTTACTTATAGGTGAATCCTGCTGTCTGGGTTAAATTGGAGATTCTAGAAAGTTAATTTTTTTTTTTTCAGTTTATTAATGTAATGTAATTACTTGACTACAATTCAGTGTTATCTCTTATAGATTGTACATGATGAGCTTGTGAAATTGATGGGGGGAGAAGTCTCCGAACTTGTTTTTTCCAAGTCTGGCCCCACTGTCATACTGTTGGCTGGTCTGCAAGGAGTTGGAAAGACAACCGTTTGTGCAAAATTGGCCAATTATCTTAAGAAACAAGTAAGGTTATAGGCTACACACACACACACTTTTCATCTTTCTCTAATTAAGCATGTGTTTGGTGTTGGTTGCTCTCTGTTTTCCTTCTGCATCCCTTTTAATCAAATATGTCTTTTTTAAACAATGTTGGCCACAGGGGAAAAGTTGCATGCTGGTGGCCGGAGATGTGTACAGGCCTGCTGCTATTGACCAATTAGTTATCTTGGGTGAACAGGTATGAAACTTCATTCCCATCAATGTCTTTTGCTTATTGACTACCGAGTAGTAAACCATTGTGTGATTTATGTGCGATATGATTATTGGTTAAGCACAAGTGGGTGAGCAAAAATACATAGTTAACCAGTTTTAGACATTCTTATTAGGTTGACTCCCTCAACAGGACTATGAATACATGACATGTCTGCACATAGAATAAAATGTAAAGTGGGAGATAGATGATAGATAGGAAATAGTAAACACGGCAGCAAAATAGATTTCAAATCATATTACTCTAGTTAATTGTAGGTTATAAATAAGTGAATACACTATTATAATATTATGTTTTGAGTCCCAAACATGGAGTGGGCTATAATATACACTCCATCAACTTCAAGTTGGAGGCCTAAAACCCCCCTAATGGTTGCTAGTGAAGATGATGTGAACTTGTGTTCTTATCTGAATAATAATAGTGAATTTTAGAGTGGACCAATTAAACACTTGGCATAGGAAAAAGGAACATGTTCCCTGATTGGTTTTGTTGGTAATTATTCTTTAAGATTTGGTGTTATGGTGATAACTTGTTGAAAGATTTTGTACAGGGTTGTAGATTAAATTCAGGAGTTTGGAATTATTAGTTAAGTTCGATGGTTTGTAATGGGTAACAATTTACTTGTCTGTTCCCTAATCAGTTGCTACTGATACTTTTGGGAAATGTGTTGATATAGAATATATTGAAGTGAAATGGTCTTTAAAGTTTGGCTCTAAAGGCAAATTGGAGATGAGTTTAATTGCATCTGCTTTTAGATTGTGAATGTTGCCTAGAGCCGGAGCTTATTCAATGAGTCCTGTTTTGTTGTTTTTATGTAGTGCATGTAGCCGGGTGATCATAGTTTGGTGTTAAATGGGATGAGGGTTCTTTTCATTCAAAATTATGGAGCTGAACAAATATGATAAAGAGTCATGAACTTATCTAGATATAATTCTTAGTTATTATTTTAGGCTCACTTTTGGTCATAGTGAATTACAGGTGAGGGTGCCTGTTTATACAGCAGGCACTGAGGTTAAGCCTTCAGACATTGCAAAACAAGGTCTACAAGAGGCTCGAAAAAATAAAGTGGATGTAGTAATTGTGGATACTGCTGGACGGCTTCAGGTGCTCATATTTTTGCTGCAAAGAATACTTGGATGGTGCCTAGAAATATAGTACAGATTGAAGACTGTTTACCATTCATTTAGCATACAACTGAAAAACTTTATTCTTCTAAAAACTGAACAGATCGACAAGGCTATGATGGATGAATTAAAAGAAGTGAAACGAGTAATCAATCCAACTGAAGTACTCCTTGTTGTGGATGCCATGACTGGTCAAGAAGCTGCAGGTATTTCATTCACCAACCTTTGGAAACAATATTAAAACTGGTTTGGAAAATAACGTGGGGACAATTAAGCCCATTGCGGTCTTATGTGGTTCTGCAGCTTTGGTCACAACATTCAACATAGAGATTGGGATCACAGGGGCTATTCTGACAAAGCTAGATGGAGATTCAAGAGGGGGAGCAGCTTTGAGTGTTAAAGAGGCATGTCATTTCGCTAAACTAATGCATATTCGCTTCTTCAAGAATTAATTTACTGGAACGTTTTATTTAGCTCAGTTCTTTTTGTTTATGAGATTTGTTTTCAGTATCATCAAATTCACAATATCACTGGATCAATTTAGCTATCTATTATATTCGTCCATCAACTTTTTTGCAGGTATCAGGAAAGCCAATCAAGCTTGTTGGTCGTGGAGAGCGCATGGACGACCTTGAACCATTTTATCCTGACCGTATGGCAGGAAGAATCTTAGGAATGGGAGATGTCCTCTCTTTTGTGGAGAAGGCACAAGAAGTGGTAGGTTTGAATTAATTTTGTCTCACTTTCAGGCAAGTTCGTAGATTTTAACTCAAATGGTGGATATAGATGCGCCAAGAGGATGCAGAAGAACTTCAAAAGAAGATATTAAGTGCGAAATTTGACTTCAATGATTTCCTGAAGCAAACTCGTGCAGTTGCACGGATGGGATCTATGACTCGTGTCATTGGAATGATCCCTGGTATGGGAAAGGTGGGAATGCAAATCTTCTGAACTTCTACCTTCTAGTTTCTTTATGCCATGCACGGCTATTAGGTGCTTGTGTTTCAATTCACTGATAATTCAAATGAGTATCACAGGACTGTTTCCAGGTCTCAGTACCTGATGTTTATGGGAATTACAACTTCCGACTTTTCTCTAATACTCTGCTCGTTTCACTCAGGTCACTCCATCCCAGGTTCGAGAAGCAGAGAAGAGTTTGAAAATAATGGAATCAATGATTGAAGCAATGACTCCGGGTATTTTATTTTCACCTGGTGCTTTCTCCCACGAGTTTGAATTTCATACTAGATCGTGCTTAAGAGGCTATGATAAATCGTGGACCATATGCATTTTAATCACCTACTTGCTTCTTTATTATTAGCGGGCGAGCATTACATTAGCTTAATTGATTGGATCAGGTTTTTGCTAGATGAGAAGTTTTCTCAATTATTCTGATTGAATGGACACTAAGCCCCTGGTTAACTCGGTCCTCAATTATCAAGCTTAGAAAGATGCCTAATACTATATTAAAAGATAAAGATGAGAATGCCTTTTAAATGTATATATTATAGTGAAGTACCTAATAAGAATGAAATAGAGCTGCATTACCTATCCACCGTTATATCTTTTTTCCTATTCAAGTACATCAAATGTTGTACCTTATTCCTCTATTGATCTCTACTCATTGAGGCTCTTCTACCCGGTAACTTTTCACTTGTTTAATGACAGAGGAAAGAGAGAAGCCAGAATTGTTGGCAGAATCACCTGCAAGGAGGAAAAGAGTTGCTCAGGATTCAGGGAAAACAGAGCAGCAGGTATGTCATGTTATTTCTTTGGTGCAATAATTGTTGATCATCCATCTTCATCAAAAATCTCCCCCTCTGCCACGACCTCAAATAATGTGGGGATTTACTGACAATGAAAATTTTATAAAACACTAGGTGAGCCAACTCGTGGCTCAACTCTTCCAAATGCGTGTTCGTATGAAGAATCTGATGGGTGTGATGGAAGGTGGATCCATTCCTGCATTGAACAATCTTGAAGAAGCTCTTAAAGCTGAACAAAAGGTTCCCTTTTTTCTCCTCTTCCTCTATATTCGATCTAAATCATGGTTAGAACTTGAATAAAATGAACTCTTCATCAATTAATTAGTCCTTGTTTGGATATGTGAATGATATATGGGTGTGACCTCATCAGGCCCCTCCTGGTACTGCACGAAGGAAGCGAAGATCTGAATCAAGGAAGCAATTTGCAAACTCAGGAACAAGGCCAAGTCCTCGTGGTTTTGGGAGTGGAAACTAAGCAAAAGTTTATAAAGAGATGCATAACAAATTCAGGTTAATGCTCCTTTTCTTGCATGTCTTTATTTACCACCTTGTTCTGTAATTTTACCACAATATTCATTCACTAGGTAATGAAACTGATTTCTTTAATGCATTGTATAATATTGTTAGATTGGTAGTTTAGACTTTAGGATATGGGCTATCAACTTAATCATGGAAACCTGCTTATTTGGAATCTTTTTCACTCCAGAAATAATATTTTAAGAAAAAGTCAGGTTAAAAGTCAAAGGCGTTAGAATGTAATGACCAAAGACTTGATTTGATGCACTCTTTGACCCTTAGTTTGTTTAGAAAGATAAGTAGAAAGTCAATCACGAAGAACAAAGCCTATATCATCCAAAATTGTGATTTGAACGTTGGGAAAGTGTTATTTGAACCAACCATGAGTTGCTTGTGGAACCTAAGTAATACCTGCCAAAAAAAAAAAAAAACCAGGACTACATTCAATTCAGTACCATTTTTGTAGATTTCACCATGAAATAGAGACTAATCCCTCTTCAG

mRNA sequence

ACACTTAGACTTGGGGGAGCTAAGAGAAAATCGTCGAATTTGGCAATGGAGGGATTGCAAATTTCGACTGTTGCTTCTCGTCATTTGAATTCGAATTCTCAATCTAACTGTGCAAGTAGAGGCTTGTGCCATGGTTCCAACTGCGCGAGAAAATCCTTGAGTATTTCATCTTCTTGGCTTGGTTCGAGCAATTTGAAGTCGCTCTCTTCGAGGAATTTGTTCACAAGGGAGATTTGGGGTTGGCTTCATGCCAAGACTGCTAACACTAGGAGAGATATGCGTGGGGTTGTACGAGCTGAAATGTTCGGCCAGTTGACAAGTGGCCTGGAGGCTGCTTGGAACAAGCTCAAAGGAGAAGAGGTTTTGACGAAGGAAAATATTGTGGAGCCAATGCGAGATATTAGGAGAGCTCTTCTGGAGGCTGATGTAAGCCTTCCTGTTGTACGAAGGTTTGTGCAAGCTGTTAGTGACCAAGCTGTTGGTGTTGGTGTGATTCGAGGAGTGAGACCTGATCAACAATTGGTTAAGATTGTACATGATGAGCTTGTGAAATTGATGGGGGGAGAAGTCTCCGAACTTGTTTTTTCCAAGTCTGGCCCCACTGTCATACTGTTGGCTGGTCTGCAAGGAGTTGGAAAGACAACCGTTTGTGCAAAATTGGCCAATTATCTTAAGAAACAAGGGAAAAGTTGCATGCTGGTGGCCGGAGATGTGTACAGGCCTGCTGCTATTGACCAATTAGTTATCTTGGGTGAACAGGTGAGGGTGCCTGTTTATACAGCAGGCACTGAGGTTAAGCCTTCAGACATTGCAAAACAAGGTCTACAAGAGGCTCGAAAAAATAAAGTGGATGTAGTAATTGTGGATACTGCTGGACGGCTTCAGATCGACAAGGCTATGATGGATGAATTAAAAGAAGTGAAACGAGTAATCAATCCAACTGAAGTACTCCTTGTTGTGGATGCCATGACTGGTCAAGAAGCTGCAGCTTTGGTCACAACATTCAACATAGAGATTGGGATCACAGGGGCTATTCTGACAAAGCTAGATGGAGATTCAAGAGGGGGAGCAGCTTTGAGTGTTAAAGAGGTATCAGGAAAGCCAATCAAGCTTGTTGGTCGTGGAGAGCGCATGGACGACCTTGAACCATTTTATCCTGACCGTATGGCAGGAAGAATCTTAGGAATGGGAGATGTCCTCTCTTTTGTGGAGAAGGCACAAGAAGTGATGCGCCAAGAGGATGCAGAAGAACTTCAAAAGAAGATATTAAGTGCGAAATTTGACTTCAATGATTTCCTGAAGCAAACTCGTGCAGTTGCACGGATGGGATCTATGACTCGTGTCATTGGAATGATCCCTGGTATGGGAAAGGTCACTCCATCCCAGGTTCGAGAAGCAGAGAAGAGTTTGAAAATAATGGAATCAATGATTGAAGCAATGACTCCGGAGGAAAGAGAGAAGCCAGAATTGTTGGCAGAATCACCTGCAAGGAGGAAAAGAGTTGCTCAGGATTCAGGGAAAACAGAGCAGCAGGTGAGCCAACTCGTGGCTCAACTCTTCCAAATGCGTGTTCGTATGAAGAATCTGATGGGTGTGATGGAAGGTGGATCCATTCCTGCATTGAACAATCTTGAAGAAGCTCTTAAAGCTGAACAAAAGGCCCCTCCTGGTACTGCACGAAGGAAGCGAAGATCTGAATCAAGGAAGCAATTTGCAAACTCAGGAACAAGGCCAAGTCCTCGTGGTTTTGGGAGTGGAAACTAAGCAAAAGTTTATAAAGAGATGCATAACAAATTCAGGTTAATGCTCCTTTTCTTGCATGTCTTTATTTACCACCTTGTTCTGTAATTTTACCACAATATTCATTCACTAGGTAATGAAACTGATTTCTTTAATGCATTGTATAATATTGTTAGATTGGTAGTTTAGACTTTAGGATATGGGCTATCAACTTAATCATGGAAACCTGCTTATTTGGAATCTTTTTCACTCCAGAAATAATATTTTAAGAAAAAGTCAGGTTAAAAGTCAAAGGCGTTAGAATGTAATGACCAAAGACTTGATTTGATGCACTCTTTGACCCTTAGTTTGTTTAGAAAGATAAGTAGAAAGTCAATCACGAAGAACAAAGCCTATATCATCCAAAATTGTGATTTGAACGTTGGGAAAGTGTTATTTGAACCAACCATGAGTTGCTTGTGGAACCTAAGTAATACCTGCCAAAAAAAAAAAAAAACCAGGACTACATTCAATTCAGTACCATTTTTGTAGATTTCACCATGAAATAGAGACTAATCCCTCTTCAG

Coding sequence (CDS)

ATGGAGGGATTGCAAATTTCGACTGTTGCTTCTCGTCATTTGAATTCGAATTCTCAATCTAACTGTGCAAGTAGAGGCTTGTGCCATGGTTCCAACTGCGCGAGAAAATCCTTGAGTATTTCATCTTCTTGGCTTGGTTCGAGCAATTTGAAGTCGCTCTCTTCGAGGAATTTGTTCACAAGGGAGATTTGGGGTTGGCTTCATGCCAAGACTGCTAACACTAGGAGAGATATGCGTGGGGTTGTACGAGCTGAAATGTTCGGCCAGTTGACAAGTGGCCTGGAGGCTGCTTGGAACAAGCTCAAAGGAGAAGAGGTTTTGACGAAGGAAAATATTGTGGAGCCAATGCGAGATATTAGGAGAGCTCTTCTGGAGGCTGATGTAAGCCTTCCTGTTGTACGAAGGTTTGTGCAAGCTGTTAGTGACCAAGCTGTTGGTGTTGGTGTGATTCGAGGAGTGAGACCTGATCAACAATTGGTTAAGATTGTACATGATGAGCTTGTGAAATTGATGGGGGGAGAAGTCTCCGAACTTGTTTTTTCCAAGTCTGGCCCCACTGTCATACTGTTGGCTGGTCTGCAAGGAGTTGGAAAGACAACCGTTTGTGCAAAATTGGCCAATTATCTTAAGAAACAAGGGAAAAGTTGCATGCTGGTGGCCGGAGATGTGTACAGGCCTGCTGCTATTGACCAATTAGTTATCTTGGGTGAACAGGTGAGGGTGCCTGTTTATACAGCAGGCACTGAGGTTAAGCCTTCAGACATTGCAAAACAAGGTCTACAAGAGGCTCGAAAAAATAAAGTGGATGTAGTAATTGTGGATACTGCTGGACGGCTTCAGATCGACAAGGCTATGATGGATGAATTAAAAGAAGTGAAACGAGTAATCAATCCAACTGAAGTACTCCTTGTTGTGGATGCCATGACTGGTCAAGAAGCTGCAGCTTTGGTCACAACATTCAACATAGAGATTGGGATCACAGGGGCTATTCTGACAAAGCTAGATGGAGATTCAAGAGGGGGAGCAGCTTTGAGTGTTAAAGAGGTATCAGGAAAGCCAATCAAGCTTGTTGGTCGTGGAGAGCGCATGGACGACCTTGAACCATTTTATCCTGACCGTATGGCAGGAAGAATCTTAGGAATGGGAGATGTCCTCTCTTTTGTGGAGAAGGCACAAGAAGTGATGCGCCAAGAGGATGCAGAAGAACTTCAAAAGAAGATATTAAGTGCGAAATTTGACTTCAATGATTTCCTGAAGCAAACTCGTGCAGTTGCACGGATGGGATCTATGACTCGTGTCATTGGAATGATCCCTGGTATGGGAAAGGTCACTCCATCCCAGGTTCGAGAAGCAGAGAAGAGTTTGAAAATAATGGAATCAATGATTGAAGCAATGACTCCGGAGGAAAGAGAGAAGCCAGAATTGTTGGCAGAATCACCTGCAAGGAGGAAAAGAGTTGCTCAGGATTCAGGGAAAACAGAGCAGCAGGTGAGCCAACTCGTGGCTCAACTCTTCCAAATGCGTGTTCGTATGAAGAATCTGATGGGTGTGATGGAAGGTGGATCCATTCCTGCATTGAACAATCTTGAAGAAGCTCTTAAAGCTGAACAAAAGGCCCCTCCTGGTACTGCACGAAGGAAGCGAAGATCTGAATCAAGGAAGCAATTTGCAAACTCAGGAACAAGGCCAAGTCCTCGTGGTTTTGGGAGTGGAAACTAA

Protein sequence

MEGLQISTVASRHLNSNSQSNCASRGLCHGSNCARKSLSISSSWLGSSNLKSLSSRNLFTREIWGWLHAKTANTRRDMRGVVRAEMFGQLTSGLEAAWNKLKGEEVLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSDQAVGVGVIRGVRPDQQLVKIVHDELVKLMGGEVSELVFSKSGPTVILLAGLQGVGKTTVCAKLANYLKKQGKSCMLVAGDVYRPAAIDQLVILGEQVRVPVYTAGTEVKPSDIAKQGLQEARKNKVDVVIVDTAGRLQIDKAMMDELKEVKRVINPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMDDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMRQEDAEELQKKILSAKFDFNDFLKQTRAVARMGSMTRVIGMIPGMGKVTPSQVREAEKSLKIMESMIEAMTPEEREKPELLAESPARRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGSIPALNNLEEALKAEQKAPPGTARRKRRSESRKQFANSGTRPSPRGFGSGN

Homology

[Close]

BLAST of Pay0009216.1 vs. ExPASy Swiss-Prot
Match: P37107 (Signal recognition particle 54 kDa protein, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=FFC PE=1 SV=1)

HSP 1 Score: 850.1 bits (2195), Expect = 1.4e-245
Identity = 457/549 (83.24%), Postives = 504/549 (91.80%), Query Frame = 0


Query: 28  CHGSNCARKSLSISSSWLGSS-NLKSL-SSRNLFTREIWGWLHAKT-ANTRRDMRGVVRA 87
           C G+   R   + SS++ G + N  SL SSRNL TREIW W+ +KT     R  R  VRA
Sbjct: 18  CTGNR--RIKAAFSSAFTGGTINSASLSSSRNLSTREIWSWVKSKTVVGHGRYRRSQVRA 77

Query: 88  EMFGQLTSGLEAAWNKLKGEEVLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSDQA 147
           EMFGQLT GLEAAW+KLKGEEVLTK+NI EPMRDIRRALLEADVSLPVVRRFVQ+VSDQA
Sbjct: 78  EMFGQLTGGLEAAWSKLKGEEVLTKDNIAEPMRDIRRALLEADVSLPVVRRFVQSVSDQA 137

Query: 148 VGVGVIRGVRPDQQLVKIVHDELVKLMGGEVSELVFSKSGPTVILLAGLQGVGKTTVCAK 207
           VG+GVIRGV+PDQQLVKIVHDELVKLMGGEVSEL F+KSGPTVILLAGLQGVGKTTVCAK
Sbjct: 138 VGMGVIRGVKPDQQLVKIVHDELVKLMGGEVSELQFAKSGPTVILLAGLQGVGKTTVCAK 197

Query: 208 LANYLKKQGKSCMLVAGDVYRPAAIDQLVILGEQVRVPVYTAGTEVKPSDIAKQGLQEAR 267
           LA YLKKQGKSCML+AGDVYRPAAIDQLVILGEQV VPVYTAGT+VKP+DIAKQGL+EA+
Sbjct: 198 LACYLKKQGKSCMLIAGDVYRPAAIDQLVILGEQVGVPVYTAGTDVKPADIAKQGLKEAK 257

Query: 268 KNKVDVVIVDTAGRLQIDKAMMDELKEVKRVINPTEVLLVVDAMTGQEAAALVTTFNIEI 327
           KN VDVVI+DTAGRLQIDK MMDELK+VK+ +NPTEVLLVVDAMTGQEAAALVTTFN+EI
Sbjct: 258 KNNVDVVIMDTAGRLQIDKGMMDELKDVKKFLNPTEVLLVVDAMTGQEAAALVTTFNVEI 317

Query: 328 GITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMDDLEPFYPDRMAGRILGMGDV 387
           GITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERM+DLEPFYPDRMAGRILGMGDV
Sbjct: 318 GITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDV 377

Query: 388 LSFVEKAQEVMRQEDAEELQKKILSAKFDFNDFLKQTRAVARMGSMTRVIGMIPGMGKVT 447
           LSFVEKA EVMRQEDAE+LQKKI+SAKFDFNDFLKQTRAVA+MGSMTRV+GMIPGMGKV+
Sbjct: 378 LSFVEKATEVMRQEDAEDLQKKIMSAKFDFNDFLKQTRAVAKMGSMTRVLGMIPGMGKVS 437

Query: 448 PSQVREAEKSLKIMESMIEAMTPEEREKPELLAESPARRKRVAQDSGKTEQQVSQLVAQL 507
           P+Q+REAEK+L +ME+MIE MTPEERE+PELLAESP RRKR+A+DSGKTEQQVS LVAQ+
Sbjct: 438 PAQIREAEKNLLVMEAMIEVMTPEERERPELLAESPERRKRIAKDSGKTEQQVSALVAQI 497

Query: 508 FQMRVRMKNLMGVMEGGSIPALNNLEEALKAEQKAPPGTARRKRRSESRKQFANS-GTRP 567
           FQMRV+MKNLMGVMEGGSIPAL+ LE+ALKAEQKAPPGTARRKR+++SRK+F  S  ++P
Sbjct: 498 FQMRVKMKNLMGVMEGGSIPALSGLEDALKAEQKAPPGTARRKRKADSRKKFVESASSKP 557

Query: 568 SPRGFGSGN 573
            PRGFGSGN
Sbjct: 558 GPRGFGSGN 564

[Close]

BLAST of Pay0009216.1 vs. ExPASy Swiss-Prot
Match: Q55311 (Signal recognition particle protein OS=Synechococcus elongatus (strain PCC 7942 / FACHB-805) OX=1140 GN=ffh PE=3 SV=1)

HSP 1 Score: 470.3 bits (1209), Expect = 3.1e-131
Identity = 254/483 (52.59%), Postives = 349/483 (72.26%), Query Frame = 0


Query: 86  MFGQLTSGLEAAWNKLKGEEVLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSDQAV 145
           MF  L   LE AW KL+G++ +++ N+ E ++++RRALLEADV+L VV+ F+  V ++AV
Sbjct: 1   MFDALAERLEQAWTKLRGQDKISESNVQEALKEVRRALLEADVNLGVVKEFIAQVQEKAV 60

Query: 146 GVGVIRGVRPDQQLVKIVHDELVKLMGGEVSELVFSKSGPTVILLAGLQGVGKTTVCAKL 205
           G  VI G+RPDQQ +K+V+DELV++MG     L  +   PTVIL+AGLQG GKTT  AKL
Sbjct: 61  GTQVISGIRPDQQFIKVVYDELVQVMGETHVPLAQAAKAPTVILMAGLQGAGKTTATAKL 120

Query: 206 ANYLKKQGKSCMLVAGDVYRPAAIDQLVILGEQVRVPVYTAGTEVKPSDIAKQGLQEARK 265
           A +L+K+G+S +LVA DVYRPAAIDQL+ LG+Q+ VPV+  G++  P +IA+QG+++AR+
Sbjct: 121 ALHLRKEGRSTLLVATDVYRPAAIDQLITLGKQIDVPVFELGSDANPVEIARQGVEKARQ 180

Query: 266 NKVDVVIVDTAGRLQIDKAMMDELKEVKRVINPTEVLLVVDAMTGQEAAALVTTFNIEIG 325
             +D VIVDTAGRLQID  MM+EL +VK  I P EVLLVVD+M GQEAA+L  +F+  IG
Sbjct: 181 EGIDTVIVDTAGRLQIDTEMMEELAQVKEAIAPHEVLLVVDSMIGQEAASLTRSFHERIG 240

Query: 326 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMDDLEPFYPDRMAGRILGMGDVL 385
           ITGAILTKLDGDSRGGAALS++ VSG+PIK VG GE+++ L+PF+P+RMA RILGMGDVL
Sbjct: 241 ITGAILTKLDGDSRGGAALSIRRVSGQPIKFVGLGEKVEALQPFHPERMASRILGMGDVL 300

Query: 386 SFVEKAQEVMRQEDAEELQKKILSAKFDFNDFLKQTRAVARMGSMTRVIGMIPGM-GKVT 445
           + VEKAQE +   D E++Q+KIL+AKFDF DFLKQ R +  MGS+   I +IPG+ GK+ 
Sbjct: 301 TLVEKAQEEIDLADVEKMQEKILAAKFDFTDFLKQMRLLKNMGSLAGFIKLIPGLGGKIN 360

Query: 446 PSQVREAEKSLKIMESMIEAMTPEEREKPELLAESPARRKRVAQDSGKTEQQVSQLVAQL 505
             Q+R+ E+ LK +E+MI +MTP+ER  P+LL+ SP+RR R+A+  G+TE ++ Q++ Q 
Sbjct: 361 DEQLRQGERQLKRVEAMINSMTPQERRDPDLLSNSPSRRHRIAKGCGQTEAEIRQIIQQF 420

Query: 506 FQMRVRMKNL-------MGVME----GGSIPALNNLEEALKAEQKAPPGTARRKRRSESR 557
            QMR  M+ +       MG M     GG +P       A +   +      ++K+ S+ +
Sbjct: 421 QQMRTMMQQMSQGGFPGMGGMGMPGFGGGMPGFGGGAPAPQPGFRGYGPPKKQKKGSKKK 480

[Close]

BLAST of Pay0009216.1 vs. ExPASy Swiss-Prot
Match: P74214 (Signal recognition particle protein OS=Synechocystis sp. (strain PCC 6803 / Kazusa) OX=1111708 GN=ffh PE=3 SV=1)

HSP 1 Score: 467.2 bits (1201), Expect = 2.6e-130
Identity = 246/437 (56.29%), Postives = 328/437 (75.06%), Query Frame = 0


Query: 86  MFGQLTSGLEAAWNKLKGEEVLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSDQAV 145
           MF  L   LE AW KL+G++ +++ NI E ++++RRALL ADV+L VV+ F++ V  +A+
Sbjct: 1   MFDALADRLEDAWKKLRGQDKISESNIKEALQEVRRALLAADVNLQVVKGFIKDVEQKAL 60

Query: 146 GVGVIRGVRPDQQLVKIVHDELVKLMGGEVSELVFSKSGPTVILLAGLQGVGKTTVCAKL 205
           G  VI GV P QQ +KIV+DELV LMG     L  ++  PTVIL+AGLQG GKTT  AKL
Sbjct: 61  GADVISGVNPGQQFIKIVYDELVNLMGESNVPLAQAEQAPTVILMAGLQGTGKTTATAKL 120

Query: 206 ANYLKKQGKSCMLVAGDVYRPAAIDQLVILGEQVRVPVYTAGTEVKPSDIAKQGLQEARK 265
           A YL+KQ +S ++VA DVYRPAAIDQL  LG+Q+ VPV+  G++  P +IA+QG+++A++
Sbjct: 121 ALYLRKQKRSALMVATDVYRPAAIDQLKTLGQQIDVPVFDLGSDANPVEIARQGVEKAKE 180

Query: 266 NKVDVVIVDTAGRLQIDKAMMDELKEVKRVINPTEVLLVVDAMTGQEAAALVTTFNIEIG 325
             VD V++DTAGRLQID  MM EL E+K+V+ P + LLVVDAMTGQEAA L  TF+ +IG
Sbjct: 181 LGVDTVLIDTAGRLQIDPQMMAELAEIKQVVKPDDTLLVVDAMTGQEAANLTHTFHEQIG 240

Query: 326 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMDDLEPFYPDRMAGRILGMGDVL 385
           ITGAILTKLDGD+RGGAALSV+++SG+PIK VG GE+++ L+PFYPDR+A RIL MGDVL
Sbjct: 241 ITGAILTKLDGDTRGGAALSVRQISGQPIKFVGVGEKVEALQPFYPDRLASRILNMGDVL 300

Query: 386 SFVEKAQEVMRQEDAEELQKKILSAKFDFNDFLKQTRAVARMGSMTRVIGMIPGMGKVTP 445
           + VEKAQE +   D E+LQ KIL A FDF+DF+KQ R +  MGS+  ++ MIPGM K++ 
Sbjct: 301 TLVEKAQEAIDVGDVEKLQNKILEATFDFDDFIKQMRFMKNMGSLGGLLKMIPGMNKLSS 360

Query: 446 SQVREAEKSLKIMESMIEAMTPEEREKPELLAESPARRKRVAQDSGKTEQQVSQLVAQLF 505
             + + EK LK  E+MI +MT EER+ P+LLA+SP+RR+R+AQ SG +E  VS+L+    
Sbjct: 361 GDIEKGEKELKRTEAMISSMTTEERKNPDLLAKSPSRRRRIAQGSGHSETDVSKLITNFT 420

Query: 506 QMRVRMKNL-MGVMEGG 522
           +MR  M+ + MG M GG
Sbjct: 421 KMRTMMQQMGMGGMPGG 437

[Close]

BLAST of Pay0009216.1 vs. ExPASy Swiss-Prot
Match: P37105 (Signal recognition particle protein OS=Bacillus subtilis (strain 168) OX=224308 GN=ffh PE=1 SV=1)

HSP 1 Score: 389.0 bits (998), Expect = 9.0e-107
Identity = 204/436 (46.79%), Postives = 312/436 (71.56%), Query Frame = 0


Query: 87  FGQLTSGLEAAWNKLKGEEVLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSDQAVG 146
           F  L   L+   +K++G+  ++++++ E MR++R ALLEADV+  VV+ FV+ VS++AVG
Sbjct: 3   FEGLADRLQQTISKIRGKGKVSEQDVKEMMREVRLALLEADVNFKVVKDFVKKVSERAVG 62

Query: 147 VGVIRGVRPDQQLVKIVHDELVKLMGGEVSELVFSKSGPTVILLAGLQGVGKTTVCAKLA 206
             V++ + P QQ++K+V +EL +LMGGE S++  +K  PTVI++ GLQG GKTT   KLA
Sbjct: 63  QDVMKSLTPGQQVIKVVQEELTELMGGEESKIAVAKRPPTVIMMVGLQGAGKTTTSGKLA 122

Query: 207 NYL-KKQGKSCMLVAGDVYRPAAIDQLVILGEQVRVPVYTAGTEVKPSDIAKQGLQEARK 266
           N L KK  +  MLVA D+YRPAAI QL  LG+Q+ +PV++ G +V P +IAKQ +++A++
Sbjct: 123 NLLRKKHNRKPMLVAADIYRPAAIKQLETLGKQLDMPVFSLGDQVSPVEIAKQAIEKAKE 182

Query: 267 NKVDVVIVDTAGRLQIDKAMMDELKEVKRVINPTEVLLVVDAMTGQEAAALVTTFNIEIG 326
              D VI+DTAGRL ID  +MDEL  VK + NP E+ LVVD+MTGQ+A  +  +FN ++G
Sbjct: 183 EHYDYVILDTAGRLHIDHELMDELTNVKEIANPEEIFLVVDSMTGQDAVNVAKSFNEQLG 242

Query: 327 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMDDLEPFYPDRMAGRILGMGDVL 386
           +TG +LTKLDGD+RGGAALS++ V+  PIK  G GE++D LEPF+P+RMA RILGMGDVL
Sbjct: 243 LTGVVLTKLDGDTRGGAALSIRAVTNTPIKFAGLGEKLDALEPFHPERMASRILGMGDVL 302

Query: 387 SFVEKAQEVMRQEDAEELQKKILSAKFDFNDFLKQTRAVARMGSMTRVIGMIPGMGKVTP 446
           + +EKAQ  + ++ A+EL++K+ +  F  +DFL+Q   V  MG +  ++ M+PG GK+  
Sbjct: 303 TLIEKAQASVDEDKAKELEQKMRTMSFTLDDFLEQLGQVRNMGPLDELLQMMPGAGKMKG 362

Query: 447 -SQVREAEKSLKIMESMIEAMTPEEREKPELLAESPARRKRVAQDSGKTEQQVSQLVAQL 506
              ++  EK L  +E++I++MT  E+E+P+++  + +RRKR+A+ SG + Q+V++L+ Q 
Sbjct: 363 LKNIQVDEKQLNHVEAIIKSMTVLEKEQPDII--NASRRKRIAKGSGTSVQEVNRLLKQF 422

Query: 507 FQMRVRMKNLMGVMEG 521
            +M+  MK +  + +G
Sbjct: 423 DEMKKMMKQMTNMSKG 436

[Close]

BLAST of Pay0009216.1 vs. ExPASy Swiss-Prot
Match: Q54431 (Signal recognition particle protein OS=Streptococcus mutans serotype c (strain ATCC 700610 / UA159) OX=210007 GN=ffh PE=3 SV=3)

HSP 1 Score: 382.9 bits (982), Expect = 6.5e-105
Identity = 204/436 (46.79%), Postives = 301/436 (69.04%), Query Frame = 0


Query: 87  FGQLTSGLEAAWNKLKGEEVLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSDQAVG 146
           F  LT  L+  +  L+G+  L+++++ E  ++IR ALLEADV+LPVV+ F++ V  +AVG
Sbjct: 3   FESLTERLQGVFKNLRGKRKLSEKDVQEVTKEIRLALLEADVALPVVKEFIKRVRKRAVG 62

Query: 147 VGVIRGVRPDQQLVKIVHDELVKLMGGEVSELVFSKSGPTVILLAGLQGVGKTTVCAKLA 206
             VI  + P QQ++KIV++EL  ++G E +E+  S   PT+I++ GLQG GKTT   KLA
Sbjct: 63  HEVIDTLDPSQQIIKIVNEELTAVLGSETAEIEKSSKIPTIIMMVGLQGAGKTTFAGKLA 122

Query: 207 NYL-KKQGKSCMLVAGDVYRPAAIDQLVILGEQVRVPVYTAGTEVKPSDIAKQGLQEARK 266
           N L K++    +++A D+YRPAAIDQL  LG+Q+ VPV+  GTE    +I  QGL +A++
Sbjct: 123 NKLVKEENARPLMIAADIYRPAAIDQLKTLGQQINVPVFDMGTEHSAVEIVSQGLAQAKE 182

Query: 267 NKVDVVIVDTAGRLQIDKAMMDELKEVKRVINPTEVLLVVDAMTGQEAAALVTTFNIEIG 326
           N+ D V++DTAGRLQID+ +M EL+++K + NP E+LLVVD+M GQEAA +   FN ++ 
Sbjct: 183 NRNDYVLIDTAGRLQIDEKLMTELRDIKALANPNEILLVVDSMIGQEAANVAREFNQQLE 242

Query: 327 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMDDLEPFYPDRMAGRILGMGDVL 386
           +TG ILTK+DGD+RGGAALSV++++GKPIK  G GE++ D+E F+PDRM+ RILGMGD+L
Sbjct: 243 VTGVILTKIDGDTRGGAALSVRQITGKPIKFTGTGEKITDIETFHPDRMSSRILGMGDLL 302

Query: 387 SFVEKAQEVMRQEDAEELQKKILSAKFDFNDFLKQTRAVARMGSMTRVIGMIPGM-GKVT 446
           + +EKA +   ++ + EL +K+    FDFNDF++Q   V  MGSM  ++ MIPGM     
Sbjct: 303 TLIEKASQDYDEQKSAELAEKMRENSFDFNDFIEQLDQVQNMGSMEDILKMIPGMANNPA 362

Query: 447 PSQVREAEKSLKIMESMIEAMTPEEREKPELLAESPARRKRVAQDSGKTEQQVSQLVAQL 506
            + V+  E  +    +++ +MTPEERE P+LL  +P+RR+R+A  SG T   V++ +   
Sbjct: 363 LANVKVDEGEIARKRAIVSSMTPEERENPDLL--TPSRRRRIASGSGNTFVNVNKFIKDF 422

Query: 507 FQMRVRMKNLMGVMEG 521
            Q +   K + GVM G
Sbjct: 423 NQAK---KMMQGVMSG 433

[Close]

BLAST of Pay0009216.1 vs. ExPASy TrEMBL
Match: A0A1S3CHA2 (signal recognition particle 54 kDa protein, chloroplastic isoform X1 OS=Cucumis melo OX=3656 GN=LOC103500903 PE=3 SV=1)

HSP 1 Score: 1072.0 bits (2771), Expect = 8.5e-310
Identity = 572/572 (100.00%), Postives = 572/572 (100.00%), Query Frame = 0


Query: 1   MEGLQISTVASRHLNSNSQSNCASRGLCHGSNCARKSLSISSSWLGSSNLKSLSSRNLFT 60
           MEGLQISTVASRHLNSNSQSNCASRGLCHGSNCARKSLSISSSWLGSSNLKSLSSRNLFT
Sbjct: 1   MEGLQISTVASRHLNSNSQSNCASRGLCHGSNCARKSLSISSSWLGSSNLKSLSSRNLFT 60

Query: 61  REIWGWLHAKTANTRRDMRGVVRAEMFGQLTSGLEAAWNKLKGEEVLTKENIVEPMRDIR 120
           REIWGWLHAKTANTRRDMRGVVRAEMFGQLTSGLEAAWNKLKGEEVLTKENIVEPMRDIR
Sbjct: 61  REIWGWLHAKTANTRRDMRGVVRAEMFGQLTSGLEAAWNKLKGEEVLTKENIVEPMRDIR 120

Query: 121 RALLEADVSLPVVRRFVQAVSDQAVGVGVIRGVRPDQQLVKIVHDELVKLMGGEVSELVF 180
           RALLEADVSLPVVRRFVQAVSDQAVGVGVIRGVRPDQQLVKIVHDELVKLMGGEVSELVF
Sbjct: 121 RALLEADVSLPVVRRFVQAVSDQAVGVGVIRGVRPDQQLVKIVHDELVKLMGGEVSELVF 180

Query: 181 SKSGPTVILLAGLQGVGKTTVCAKLANYLKKQGKSCMLVAGDVYRPAAIDQLVILGEQVR 240
           SKSGPTVILLAGLQGVGKTTVCAKLANYLKKQGKSCMLVAGDVYRPAAIDQLVILGEQVR
Sbjct: 181 SKSGPTVILLAGLQGVGKTTVCAKLANYLKKQGKSCMLVAGDVYRPAAIDQLVILGEQVR 240

Query: 241 VPVYTAGTEVKPSDIAKQGLQEARKNKVDVVIVDTAGRLQIDKAMMDELKEVKRVINPTE 300
           VPVYTAGTEVKPSDIAKQGLQEARKNKVDVVIVDTAGRLQIDKAMMDELKEVKRVINPTE
Sbjct: 241 VPVYTAGTEVKPSDIAKQGLQEARKNKVDVVIVDTAGRLQIDKAMMDELKEVKRVINPTE 300

Query: 301 VLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRG 360
           VLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRG
Sbjct: 301 VLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRG 360

Query: 361 ERMDDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMRQEDAEELQKKILSAKFDFNDFLKQ 420
           ERMDDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMRQEDAEELQKKILSAKFDFNDFLKQ
Sbjct: 361 ERMDDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMRQEDAEELQKKILSAKFDFNDFLKQ 420

Query: 421 TRAVARMGSMTRVIGMIPGMGKVTPSQVREAEKSLKIMESMIEAMTPEEREKPELLAESP 480
           TRAVARMGSMTRVIGMIPGMGKVTPSQVREAEKSLKIMESMIEAMTPEEREKPELLAESP
Sbjct: 421 TRAVARMGSMTRVIGMIPGMGKVTPSQVREAEKSLKIMESMIEAMTPEEREKPELLAESP 480

Query: 481 ARRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGSIPALNNLEEALKAEQKAP 540
           ARRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGSIPALNNLEEALKAEQKAP
Sbjct: 481 ARRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGSIPALNNLEEALKAEQKAP 540

Query: 541 PGTARRKRRSESRKQFANSGTRPSPRGFGSGN 573
           PGTARRKRRSESRKQFANSGTRPSPRGFGSGN
Sbjct: 541 PGTARRKRRSESRKQFANSGTRPSPRGFGSGN 572

[Close]

BLAST of Pay0009216.1 vs. ExPASy TrEMBL
Match: A0A5D3C7H8 (Signal recognition particle 54 kDa protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold202G001420 PE=3 SV=1)

HSP 1 Score: 1072.0 bits (2771), Expect = 8.5e-310
Identity = 572/572 (100.00%), Postives = 572/572 (100.00%), Query Frame = 0


Query: 1   MEGLQISTVASRHLNSNSQSNCASRGLCHGSNCARKSLSISSSWLGSSNLKSLSSRNLFT 60
           MEGLQISTVASRHLNSNSQSNCASRGLCHGSNCARKSLSISSSWLGSSNLKSLSSRNLFT
Sbjct: 1   MEGLQISTVASRHLNSNSQSNCASRGLCHGSNCARKSLSISSSWLGSSNLKSLSSRNLFT 60

Query: 61  REIWGWLHAKTANTRRDMRGVVRAEMFGQLTSGLEAAWNKLKGEEVLTKENIVEPMRDIR 120
           REIWGWLHAKTANTRRDMRGVVRAEMFGQLTSGLEAAWNKLKGEEVLTKENIVEPMRDIR
Sbjct: 61  REIWGWLHAKTANTRRDMRGVVRAEMFGQLTSGLEAAWNKLKGEEVLTKENIVEPMRDIR 120

Query: 121 RALLEADVSLPVVRRFVQAVSDQAVGVGVIRGVRPDQQLVKIVHDELVKLMGGEVSELVF 180
           RALLEADVSLPVVRRFVQAVSDQAVGVGVIRGVRPDQQLVKIVHDELVKLMGGEVSELVF
Sbjct: 121 RALLEADVSLPVVRRFVQAVSDQAVGVGVIRGVRPDQQLVKIVHDELVKLMGGEVSELVF 180

Query: 181 SKSGPTVILLAGLQGVGKTTVCAKLANYLKKQGKSCMLVAGDVYRPAAIDQLVILGEQVR 240
           SKSGPTVILLAGLQGVGKTTVCAKLANYLKKQGKSCMLVAGDVYRPAAIDQLVILGEQVR
Sbjct: 181 SKSGPTVILLAGLQGVGKTTVCAKLANYLKKQGKSCMLVAGDVYRPAAIDQLVILGEQVR 240

Query: 241 VPVYTAGTEVKPSDIAKQGLQEARKNKVDVVIVDTAGRLQIDKAMMDELKEVKRVINPTE 300
           VPVYTAGTEVKPSDIAKQGLQEARKNKVDVVIVDTAGRLQIDKAMMDELKEVKRVINPTE
Sbjct: 241 VPVYTAGTEVKPSDIAKQGLQEARKNKVDVVIVDTAGRLQIDKAMMDELKEVKRVINPTE 300

Query: 301 VLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRG 360
           VLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRG
Sbjct: 301 VLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRG 360

Query: 361 ERMDDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMRQEDAEELQKKILSAKFDFNDFLKQ 420
           ERMDDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMRQEDAEELQKKILSAKFDFNDFLKQ
Sbjct: 361 ERMDDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMRQEDAEELQKKILSAKFDFNDFLKQ 420

Query: 421 TRAVARMGSMTRVIGMIPGMGKVTPSQVREAEKSLKIMESMIEAMTPEEREKPELLAESP 480
           TRAVARMGSMTRVIGMIPGMGKVTPSQVREAEKSLKIMESMIEAMTPEEREKPELLAESP
Sbjct: 421 TRAVARMGSMTRVIGMIPGMGKVTPSQVREAEKSLKIMESMIEAMTPEEREKPELLAESP 480

Query: 481 ARRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGSIPALNNLEEALKAEQKAP 540
           ARRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGSIPALNNLEEALKAEQKAP
Sbjct: 481 ARRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGSIPALNNLEEALKAEQKAP 540

Query: 541 PGTARRKRRSESRKQFANSGTRPSPRGFGSGN 573
           PGTARRKRRSESRKQFANSGTRPSPRGFGSGN
Sbjct: 541 PGTARRKRRSESRKQFANSGTRPSPRGFGSGN 572

[Close]

BLAST of Pay0009216.1 vs. ExPASy TrEMBL
Match: A0A0A0KIP4 (Signal recognition particle protein OS=Cucumis sativus OX=3659 GN=Csa_6G452680 PE=3 SV=1)

HSP 1 Score: 1050.0 bits (2714), Expect = 3.5e-303
Identity = 561/572 (98.08%), Postives = 566/572 (98.95%), Query Frame = 0


Query: 1   MEGLQISTVASRHLNSNSQSNCASRGLCHGSNCARKSLSISSSWLGSSNLKSLSSRNLFT 60
           MEGLQISTVASRHL SNSQS+CASRGLCHGSNCARK+ SISSSWLGSSNLKSLSSRNLFT
Sbjct: 1   MEGLQISTVASRHLTSNSQSHCASRGLCHGSNCARKTSSISSSWLGSSNLKSLSSRNLFT 60

Query: 61  REIWGWLHAKTANTRRDMRGVVRAEMFGQLTSGLEAAWNKLKGEEVLTKENIVEPMRDIR 120
           REIWGWLHAKT NTRRDMRGVVRAEMFGQLTSGLEAAWNKLKGEEVL+KENIVEPMRDIR
Sbjct: 61  REIWGWLHAKTVNTRRDMRGVVRAEMFGQLTSGLEAAWNKLKGEEVLSKENIVEPMRDIR 120

Query: 121 RALLEADVSLPVVRRFVQAVSDQAVGVGVIRGVRPDQQLVKIVHDELVKLMGGEVSELVF 180
           RALLEADVSLPVVRRFVQAVSDQAVGVGVIRGVRPDQQLVKIVHDELVKLMGGEVSELVF
Sbjct: 121 RALLEADVSLPVVRRFVQAVSDQAVGVGVIRGVRPDQQLVKIVHDELVKLMGGEVSELVF 180

Query: 181 SKSGPTVILLAGLQGVGKTTVCAKLANYLKKQGKSCMLVAGDVYRPAAIDQLVILGEQVR 240
           SKSGPTVILLAGLQGVGKTTVCAKLANYLKKQGKSCMLVAGDVYRPAAIDQLVILGEQV 
Sbjct: 181 SKSGPTVILLAGLQGVGKTTVCAKLANYLKKQGKSCMLVAGDVYRPAAIDQLVILGEQVG 240

Query: 241 VPVYTAGTEVKPSDIAKQGLQEARKNKVDVVIVDTAGRLQIDKAMMDELKEVKRVINPTE 300
           VPVYTAGTEVKPSDIAKQGLQEARKNKVDVVIVDTAGRLQID+AMMDELKEVKRVINPTE
Sbjct: 241 VPVYTAGTEVKPSDIAKQGLQEARKNKVDVVIVDTAGRLQIDRAMMDELKEVKRVINPTE 300

Query: 301 VLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRG 360
           VLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRG
Sbjct: 301 VLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRG 360

Query: 361 ERMDDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMRQEDAEELQKKILSAKFDFNDFLKQ 420
           ERMDDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMRQEDAEELQKKILSAKFDFNDFLKQ
Sbjct: 361 ERMDDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMRQEDAEELQKKILSAKFDFNDFLKQ 420

Query: 421 TRAVARMGSMTRVIGMIPGMGKVTPSQVREAEKSLKIMESMIEAMTPEEREKPELLAESP 480
           TRAVARMGSMTRVIGMIPGMGKVTP+QVREAEKSLKIMESMIEAMTPEEREKPELLAESP
Sbjct: 421 TRAVARMGSMTRVIGMIPGMGKVTPAQVREAEKSLKIMESMIEAMTPEEREKPELLAESP 480

Query: 481 ARRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGSIPALNNLEEALKAEQKAP 540
           ARRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGSIPALNNLEEALKAEQKAP
Sbjct: 481 ARRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGSIPALNNLEEALKAEQKAP 540

Query: 541 PGTARRKRRSESRKQFANSGTRPSPRGFGSGN 573
           PGTARRKRRSESRKQFANS TR SPRGFGSGN
Sbjct: 541 PGTARRKRRSESRKQFANSETRSSPRGFGSGN 572

[Close]

BLAST of Pay0009216.1 vs. ExPASy TrEMBL
Match: A0A6J1IRE1 (signal recognition particle 54 kDa protein, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111477788 PE=3 SV=1)

HSP 1 Score: 1030.8 bits (2664), Expect = 2.2e-297
Identity = 548/572 (95.80%), Postives = 558/572 (97.55%), Query Frame = 0


Query: 1   MEGLQISTVASRHLNSNSQSNCASRGLCHGSNCARKSLSISSSWLGSSNLKSLSSRNLFT 60
           ME LQIS V+SRHL SNSQS CASR LCHGSNC RKS SISSSWLGSSNLKSLSSRNLF 
Sbjct: 1   MEALQISIVSSRHLASNSQSPCASRSLCHGSNCGRKSSSISSSWLGSSNLKSLSSRNLFA 60

Query: 61  REIWGWLHAKTANTRRDMRGVVRAEMFGQLTSGLEAAWNKLKGEEVLTKENIVEPMRDIR 120
           REIWGWLHAKTANTRRDMRGVVRAEMFGQLT GLEAAWNKLKGEEVL+KENIVEPMRDIR
Sbjct: 61  REIWGWLHAKTANTRRDMRGVVRAEMFGQLTGGLEAAWNKLKGEEVLSKENIVEPMRDIR 120

Query: 121 RALLEADVSLPVVRRFVQAVSDQAVGVGVIRGVRPDQQLVKIVHDELVKLMGGEVSELVF 180
           RALLEADVSLPVVRRFVQAVSDQAVGVGVIRGV+PDQQLVKIVHDELVKLMGGEVSELVF
Sbjct: 121 RALLEADVSLPVVRRFVQAVSDQAVGVGVIRGVKPDQQLVKIVHDELVKLMGGEVSELVF 180

Query: 181 SKSGPTVILLAGLQGVGKTTVCAKLANYLKKQGKSCMLVAGDVYRPAAIDQLVILGEQVR 240
           SKSGPTVILLAGLQGVGKTTVCAKLANYLKKQGKSCMLVAGDVYRPAAIDQLVILGEQV 
Sbjct: 181 SKSGPTVILLAGLQGVGKTTVCAKLANYLKKQGKSCMLVAGDVYRPAAIDQLVILGEQVG 240

Query: 241 VPVYTAGTEVKPSDIAKQGLQEARKNKVDVVIVDTAGRLQIDKAMMDELKEVKRVINPTE 300
           VPVYTAGTEVKPSDIAKQGLQEARKNKVDVVIVDTAGRLQIDKAMMDELKEVKR INPTE
Sbjct: 241 VPVYTAGTEVKPSDIAKQGLQEARKNKVDVVIVDTAGRLQIDKAMMDELKEVKRAINPTE 300

Query: 301 VLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRG 360
           VLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRG
Sbjct: 301 VLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRG 360

Query: 361 ERMDDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMRQEDAEELQKKILSAKFDFNDFLKQ 420
           ERM+DLEPFYPDRMAGRILGMGDVLSFVEKAQEVMRQEDAE+LQKKI+SAKFDFNDFLKQ
Sbjct: 361 ERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMRQEDAEDLQKKIMSAKFDFNDFLKQ 420

Query: 421 TRAVARMGSMTRVIGMIPGMGKVTPSQVREAEKSLKIMESMIEAMTPEEREKPELLAESP 480
           TRAVARMGSMTRV+GMIPGMGKVTP+Q+REAEKSLKIMESMIEAMTPEEREKPELLAESP
Sbjct: 421 TRAVARMGSMTRVLGMIPGMGKVTPAQIREAEKSLKIMESMIEAMTPEEREKPELLAESP 480

Query: 481 ARRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGSIPALNNLEEALKAEQKAP 540
           ARRKR+AQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGSIPALNNLEEALKAEQKAP
Sbjct: 481 ARRKRIAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGSIPALNNLEEALKAEQKAP 540

Query: 541 PGTARRKRRSESRKQFANSGTRPSPRGFGSGN 573
           PGTARRKRRSES KQ  NSGTRPSPRGFGSGN
Sbjct: 541 PGTARRKRRSESMKQLLNSGTRPSPRGFGSGN 572

[Close]

BLAST of Pay0009216.1 vs. ExPASy TrEMBL
Match: A0A6J1EJP1 (signal recognition particle 54 kDa protein, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111433217 PE=3 SV=1)

HSP 1 Score: 1030.8 bits (2664), Expect = 2.2e-297
Identity = 548/572 (95.80%), Postives = 558/572 (97.55%), Query Frame = 0


Query: 1   MEGLQISTVASRHLNSNSQSNCASRGLCHGSNCARKSLSISSSWLGSSNLKSLSSRNLFT 60
           ME LQIS V+SRHL SNSQS CASR LCHGSNC RKS SISSSWLGSSNLKSLSSRNLF 
Sbjct: 1   MEALQISIVSSRHLASNSQSPCASRSLCHGSNCGRKSSSISSSWLGSSNLKSLSSRNLFA 60

Query: 61  REIWGWLHAKTANTRRDMRGVVRAEMFGQLTSGLEAAWNKLKGEEVLTKENIVEPMRDIR 120
           REIWGWLHAKTANTRRDMRGVVRAEMFGQLT GLEAAWNKLKGEEVL+KENIVEPMRDIR
Sbjct: 61  REIWGWLHAKTANTRRDMRGVVRAEMFGQLTGGLEAAWNKLKGEEVLSKENIVEPMRDIR 120

Query: 121 RALLEADVSLPVVRRFVQAVSDQAVGVGVIRGVRPDQQLVKIVHDELVKLMGGEVSELVF 180
           RALLEADVSLPVVRRFVQAVSDQAVGVGVIRGV+PDQQLVKIVHDELVKLMGGEVSELVF
Sbjct: 121 RALLEADVSLPVVRRFVQAVSDQAVGVGVIRGVKPDQQLVKIVHDELVKLMGGEVSELVF 180

Query: 181 SKSGPTVILLAGLQGVGKTTVCAKLANYLKKQGKSCMLVAGDVYRPAAIDQLVILGEQVR 240
           SKSGPTVILLAGLQGVGKTTVCAKLANYLKKQGKSCMLVAGDVYRPAAIDQLVILGEQV 
Sbjct: 181 SKSGPTVILLAGLQGVGKTTVCAKLANYLKKQGKSCMLVAGDVYRPAAIDQLVILGEQVG 240

Query: 241 VPVYTAGTEVKPSDIAKQGLQEARKNKVDVVIVDTAGRLQIDKAMMDELKEVKRVINPTE 300
           VPVYTAGTEVKPSDIAKQGLQEARKNKVDVVIVDTAGRLQIDKAMMDELKEVKR INPTE
Sbjct: 241 VPVYTAGTEVKPSDIAKQGLQEARKNKVDVVIVDTAGRLQIDKAMMDELKEVKRAINPTE 300

Query: 301 VLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRG 360
           VLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRG
Sbjct: 301 VLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRG 360

Query: 361 ERMDDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMRQEDAEELQKKILSAKFDFNDFLKQ 420
           ERM+DLEPFYPDRMAGRILGMGDVLSFVEKAQEVMRQEDAE+LQKKI+SAKFDFNDFLKQ
Sbjct: 361 ERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMRQEDAEDLQKKIMSAKFDFNDFLKQ 420

Query: 421 TRAVARMGSMTRVIGMIPGMGKVTPSQVREAEKSLKIMESMIEAMTPEEREKPELLAESP 480
           TRAVARMGSMTRV+GMIPGMGKVTP+Q+REAEKSLKIMESMIEAMTPEEREKPELLAESP
Sbjct: 421 TRAVARMGSMTRVLGMIPGMGKVTPAQIREAEKSLKIMESMIEAMTPEEREKPELLAESP 480

Query: 481 ARRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGSIPALNNLEEALKAEQKAP 540
           ARRKR+AQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGSIPALNNLEEALKAEQKAP
Sbjct: 481 ARRKRIAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGSIPALNNLEEALKAEQKAP 540

Query: 541 PGTARRKRRSESRKQFANSGTRPSPRGFGSGN 573
           PGTARRKRRSES KQ  NSGTRPSPRGFGSGN
Sbjct: 541 PGTARRKRRSESMKQLLNSGTRPSPRGFGSGN 572

[Close]

BLAST of Pay0009216.1 vs. NCBI nr
Match: XP_008462577.1 (PREDICTED: signal recognition particle 54 kDa protein, chloroplastic isoform X1 [Cucumis melo] >XP_008462578.1 PREDICTED: signal recognition particle 54 kDa protein, chloroplastic isoform X1 [Cucumis melo] >KAA0025252.1 signal recognition particle 54 kDa protein [Cucumis melo var. makuwa] >TYK07415.1 signal recognition particle 54 kDa protein [Cucumis melo var. makuwa])

HSP 1 Score: 1072.0 bits (2771), Expect = 1.8e-309
Identity = 572/572 (100.00%), Postives = 572/572 (100.00%), Query Frame = 0


Query: 1   MEGLQISTVASRHLNSNSQSNCASRGLCHGSNCARKSLSISSSWLGSSNLKSLSSRNLFT 60
           MEGLQISTVASRHLNSNSQSNCASRGLCHGSNCARKSLSISSSWLGSSNLKSLSSRNLFT
Sbjct: 1   MEGLQISTVASRHLNSNSQSNCASRGLCHGSNCARKSLSISSSWLGSSNLKSLSSRNLFT 60

Query: 61  REIWGWLHAKTANTRRDMRGVVRAEMFGQLTSGLEAAWNKLKGEEVLTKENIVEPMRDIR 120
           REIWGWLHAKTANTRRDMRGVVRAEMFGQLTSGLEAAWNKLKGEEVLTKENIVEPMRDIR
Sbjct: 61  REIWGWLHAKTANTRRDMRGVVRAEMFGQLTSGLEAAWNKLKGEEVLTKENIVEPMRDIR 120

Query: 121 RALLEADVSLPVVRRFVQAVSDQAVGVGVIRGVRPDQQLVKIVHDELVKLMGGEVSELVF 180
           RALLEADVSLPVVRRFVQAVSDQAVGVGVIRGVRPDQQLVKIVHDELVKLMGGEVSELVF
Sbjct: 121 RALLEADVSLPVVRRFVQAVSDQAVGVGVIRGVRPDQQLVKIVHDELVKLMGGEVSELVF 180

Query: 181 SKSGPTVILLAGLQGVGKTTVCAKLANYLKKQGKSCMLVAGDVYRPAAIDQLVILGEQVR 240
           SKSGPTVILLAGLQGVGKTTVCAKLANYLKKQGKSCMLVAGDVYRPAAIDQLVILGEQVR
Sbjct: 181 SKSGPTVILLAGLQGVGKTTVCAKLANYLKKQGKSCMLVAGDVYRPAAIDQLVILGEQVR 240

Query: 241 VPVYTAGTEVKPSDIAKQGLQEARKNKVDVVIVDTAGRLQIDKAMMDELKEVKRVINPTE 300
           VPVYTAGTEVKPSDIAKQGLQEARKNKVDVVIVDTAGRLQIDKAMMDELKEVKRVINPTE
Sbjct: 241 VPVYTAGTEVKPSDIAKQGLQEARKNKVDVVIVDTAGRLQIDKAMMDELKEVKRVINPTE 300

Query: 301 VLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRG 360
           VLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRG
Sbjct: 301 VLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRG 360

Query: 361 ERMDDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMRQEDAEELQKKILSAKFDFNDFLKQ 420
           ERMDDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMRQEDAEELQKKILSAKFDFNDFLKQ
Sbjct: 361 ERMDDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMRQEDAEELQKKILSAKFDFNDFLKQ 420

Query: 421 TRAVARMGSMTRVIGMIPGMGKVTPSQVREAEKSLKIMESMIEAMTPEEREKPELLAESP 480
           TRAVARMGSMTRVIGMIPGMGKVTPSQVREAEKSLKIMESMIEAMTPEEREKPELLAESP
Sbjct: 421 TRAVARMGSMTRVIGMIPGMGKVTPSQVREAEKSLKIMESMIEAMTPEEREKPELLAESP 480

Query: 481 ARRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGSIPALNNLEEALKAEQKAP 540
           ARRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGSIPALNNLEEALKAEQKAP
Sbjct: 481 ARRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGSIPALNNLEEALKAEQKAP 540

Query: 541 PGTARRKRRSESRKQFANSGTRPSPRGFGSGN 573
           PGTARRKRRSESRKQFANSGTRPSPRGFGSGN
Sbjct: 541 PGTARRKRRSESRKQFANSGTRPSPRGFGSGN 572

[Close]

BLAST of Pay0009216.1 vs. NCBI nr
Match: XP_004143384.1 (signal recognition particle 54 kDa protein, chloroplastic [Cucumis sativus] >KGN48267.1 hypothetical protein Csa_003895 [Cucumis sativus])

HSP 1 Score: 1050.0 bits (2714), Expect = 7.2e-303
Identity = 561/572 (98.08%), Postives = 566/572 (98.95%), Query Frame = 0


Query: 1   MEGLQISTVASRHLNSNSQSNCASRGLCHGSNCARKSLSISSSWLGSSNLKSLSSRNLFT 60
           MEGLQISTVASRHL SNSQS+CASRGLCHGSNCARK+ SISSSWLGSSNLKSLSSRNLFT
Sbjct: 1   MEGLQISTVASRHLTSNSQSHCASRGLCHGSNCARKTSSISSSWLGSSNLKSLSSRNLFT 60

Query: 61  REIWGWLHAKTANTRRDMRGVVRAEMFGQLTSGLEAAWNKLKGEEVLTKENIVEPMRDIR 120
           REIWGWLHAKT NTRRDMRGVVRAEMFGQLTSGLEAAWNKLKGEEVL+KENIVEPMRDIR
Sbjct: 61  REIWGWLHAKTVNTRRDMRGVVRAEMFGQLTSGLEAAWNKLKGEEVLSKENIVEPMRDIR 120

Query: 121 RALLEADVSLPVVRRFVQAVSDQAVGVGVIRGVRPDQQLVKIVHDELVKLMGGEVSELVF 180
           RALLEADVSLPVVRRFVQAVSDQAVGVGVIRGVRPDQQLVKIVHDELVKLMGGEVSELVF
Sbjct: 121 RALLEADVSLPVVRRFVQAVSDQAVGVGVIRGVRPDQQLVKIVHDELVKLMGGEVSELVF 180

Query: 181 SKSGPTVILLAGLQGVGKTTVCAKLANYLKKQGKSCMLVAGDVYRPAAIDQLVILGEQVR 240
           SKSGPTVILLAGLQGVGKTTVCAKLANYLKKQGKSCMLVAGDVYRPAAIDQLVILGEQV 
Sbjct: 181 SKSGPTVILLAGLQGVGKTTVCAKLANYLKKQGKSCMLVAGDVYRPAAIDQLVILGEQVG 240

Query: 241 VPVYTAGTEVKPSDIAKQGLQEARKNKVDVVIVDTAGRLQIDKAMMDELKEVKRVINPTE 300
           VPVYTAGTEVKPSDIAKQGLQEARKNKVDVVIVDTAGRLQID+AMMDELKEVKRVINPTE
Sbjct: 241 VPVYTAGTEVKPSDIAKQGLQEARKNKVDVVIVDTAGRLQIDRAMMDELKEVKRVINPTE 300

Query: 301 VLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRG 360
           VLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRG
Sbjct: 301 VLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRG 360

Query: 361 ERMDDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMRQEDAEELQKKILSAKFDFNDFLKQ 420
           ERMDDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMRQEDAEELQKKILSAKFDFNDFLKQ
Sbjct: 361 ERMDDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMRQEDAEELQKKILSAKFDFNDFLKQ 420

Query: 421 TRAVARMGSMTRVIGMIPGMGKVTPSQVREAEKSLKIMESMIEAMTPEEREKPELLAESP 480
           TRAVARMGSMTRVIGMIPGMGKVTP+QVREAEKSLKIMESMIEAMTPEEREKPELLAESP
Sbjct: 421 TRAVARMGSMTRVIGMIPGMGKVTPAQVREAEKSLKIMESMIEAMTPEEREKPELLAESP 480

Query: 481 ARRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGSIPALNNLEEALKAEQKAP 540
           ARRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGSIPALNNLEEALKAEQKAP
Sbjct: 481 ARRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGSIPALNNLEEALKAEQKAP 540

Query: 541 PGTARRKRRSESRKQFANSGTRPSPRGFGSGN 573
           PGTARRKRRSESRKQFANS TR SPRGFGSGN
Sbjct: 541 PGTARRKRRSESRKQFANSETRSSPRGFGSGN 572

[Close]

BLAST of Pay0009216.1 vs. NCBI nr
Match: XP_038882869.1 (signal recognition particle 54 kDa protein, chloroplastic [Benincasa hispida])

HSP 1 Score: 1039.6 bits (2687), Expect = 9.7e-300
Identity = 555/572 (97.03%), Postives = 562/572 (98.25%), Query Frame = 0


Query: 1   MEGLQISTVASRHLNSNSQSNCASRGLCHGSNCARKSLSISSSWLGSSNLKSLSSRNLFT 60
           ME LQISTVASRHL SNSQS CASR LCHGSNCARKS +ISSSWLGSSNLKSLSSRNLFT
Sbjct: 1   MEALQISTVASRHLASNSQSPCASRSLCHGSNCARKSSTISSSWLGSSNLKSLSSRNLFT 60

Query: 61  REIWGWLHAKTANTRRDMRGVVRAEMFGQLTSGLEAAWNKLKGEEVLTKENIVEPMRDIR 120
           REIWGWLHAKTANTRR+MR VVRAEMFGQLTSGLEAAWNKLKGEEVL+KENIVEPMRDIR
Sbjct: 61  REIWGWLHAKTANTRREMRWVVRAEMFGQLTSGLEAAWNKLKGEEVLSKENIVEPMRDIR 120

Query: 121 RALLEADVSLPVVRRFVQAVSDQAVGVGVIRGVRPDQQLVKIVHDELVKLMGGEVSELVF 180
           RALLEADVSLPVVRRFVQAVSDQAVGVGVIRGVRPDQQLVKIVHDELVKLMGGEVSELVF
Sbjct: 121 RALLEADVSLPVVRRFVQAVSDQAVGVGVIRGVRPDQQLVKIVHDELVKLMGGEVSELVF 180

Query: 181 SKSGPTVILLAGLQGVGKTTVCAKLANYLKKQGKSCMLVAGDVYRPAAIDQLVILGEQVR 240
           SKSGPTVILLAGLQGVGKTTVCAKLANYLKKQGKSCMLVAGDVYRPAAIDQLVILGEQV 
Sbjct: 181 SKSGPTVILLAGLQGVGKTTVCAKLANYLKKQGKSCMLVAGDVYRPAAIDQLVILGEQVG 240

Query: 241 VPVYTAGTEVKPSDIAKQGLQEARKNKVDVVIVDTAGRLQIDKAMMDELKEVKRVINPTE 300
           VPVYTAGTEVKPSDIAKQGLQEARKNKVDVVIVDTAGRLQIDKAMMDELKEVKR INPTE
Sbjct: 241 VPVYTAGTEVKPSDIAKQGLQEARKNKVDVVIVDTAGRLQIDKAMMDELKEVKRAINPTE 300

Query: 301 VLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRG 360
           VLLVVDAMTGQEAAALVTTFN+EIGITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRG
Sbjct: 301 VLLVVDAMTGQEAAALVTTFNMEIGITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRG 360

Query: 361 ERMDDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMRQEDAEELQKKILSAKFDFNDFLKQ 420
           ERM+DLEPFYPDRMAGRILGMGDVLSFVEKAQEVMRQEDAEELQKKI+SAKFDFNDFLKQ
Sbjct: 361 ERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMRQEDAEELQKKIMSAKFDFNDFLKQ 420

Query: 421 TRAVARMGSMTRVIGMIPGMGKVTPSQVREAEKSLKIMESMIEAMTPEEREKPELLAESP 480
           TRAVARMGSMTRVIGMIPGMGKVTP+QVREAEKSLKIMESMIEAMTPEEREKPELLAESP
Sbjct: 421 TRAVARMGSMTRVIGMIPGMGKVTPAQVREAEKSLKIMESMIEAMTPEEREKPELLAESP 480

Query: 481 ARRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGSIPALNNLEEALKAEQKAP 540
           ARRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGSIPALNNLEEALKAEQKAP
Sbjct: 481 ARRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGSIPALNNLEEALKAEQKAP 540

Query: 541 PGTARRKRRSESRKQFANSGTRPSPRGFGSGN 573
           PGTARRKRRSESRKQF NSGTRPSPRGFG GN
Sbjct: 541 PGTARRKRRSESRKQFVNSGTRPSPRGFGGGN 572

[Close]

BLAST of Pay0009216.1 vs. NCBI nr
Match: XP_022925955.1 (signal recognition particle 54 kDa protein, chloroplastic [Cucurbita moschata] >XP_022977444.1 signal recognition particle 54 kDa protein, chloroplastic [Cucurbita maxima] >KAG7034496.1 Signal recognition particle 54 kDa protein, chloroplastic [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 1030.8 bits (2664), Expect = 4.5e-297
Identity = 548/572 (95.80%), Postives = 558/572 (97.55%), Query Frame = 0


Query: 1   MEGLQISTVASRHLNSNSQSNCASRGLCHGSNCARKSLSISSSWLGSSNLKSLSSRNLFT 60
           ME LQIS V+SRHL SNSQS CASR LCHGSNC RKS SISSSWLGSSNLKSLSSRNLF 
Sbjct: 1   MEALQISIVSSRHLASNSQSPCASRSLCHGSNCGRKSSSISSSWLGSSNLKSLSSRNLFA 60

Query: 61  REIWGWLHAKTANTRRDMRGVVRAEMFGQLTSGLEAAWNKLKGEEVLTKENIVEPMRDIR 120
           REIWGWLHAKTANTRRDMRGVVRAEMFGQLT GLEAAWNKLKGEEVL+KENIVEPMRDIR
Sbjct: 61  REIWGWLHAKTANTRRDMRGVVRAEMFGQLTGGLEAAWNKLKGEEVLSKENIVEPMRDIR 120

Query: 121 RALLEADVSLPVVRRFVQAVSDQAVGVGVIRGVRPDQQLVKIVHDELVKLMGGEVSELVF 180
           RALLEADVSLPVVRRFVQAVSDQAVGVGVIRGV+PDQQLVKIVHDELVKLMGGEVSELVF
Sbjct: 121 RALLEADVSLPVVRRFVQAVSDQAVGVGVIRGVKPDQQLVKIVHDELVKLMGGEVSELVF 180

Query: 181 SKSGPTVILLAGLQGVGKTTVCAKLANYLKKQGKSCMLVAGDVYRPAAIDQLVILGEQVR 240
           SKSGPTVILLAGLQGVGKTTVCAKLANYLKKQGKSCMLVAGDVYRPAAIDQLVILGEQV 
Sbjct: 181 SKSGPTVILLAGLQGVGKTTVCAKLANYLKKQGKSCMLVAGDVYRPAAIDQLVILGEQVG 240

Query: 241 VPVYTAGTEVKPSDIAKQGLQEARKNKVDVVIVDTAGRLQIDKAMMDELKEVKRVINPTE 300
           VPVYTAGTEVKPSDIAKQGLQEARKNKVDVVIVDTAGRLQIDKAMMDELKEVKR INPTE
Sbjct: 241 VPVYTAGTEVKPSDIAKQGLQEARKNKVDVVIVDTAGRLQIDKAMMDELKEVKRAINPTE 300

Query: 301 VLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRG 360
           VLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRG
Sbjct: 301 VLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRG 360

Query: 361 ERMDDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMRQEDAEELQKKILSAKFDFNDFLKQ 420
           ERM+DLEPFYPDRMAGRILGMGDVLSFVEKAQEVMRQEDAE+LQKKI+SAKFDFNDFLKQ
Sbjct: 361 ERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMRQEDAEDLQKKIMSAKFDFNDFLKQ 420

Query: 421 TRAVARMGSMTRVIGMIPGMGKVTPSQVREAEKSLKIMESMIEAMTPEEREKPELLAESP 480
           TRAVARMGSMTRV+GMIPGMGKVTP+Q+REAEKSLKIMESMIEAMTPEEREKPELLAESP
Sbjct: 421 TRAVARMGSMTRVLGMIPGMGKVTPAQIREAEKSLKIMESMIEAMTPEEREKPELLAESP 480

Query: 481 ARRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGSIPALNNLEEALKAEQKAP 540
           ARRKR+AQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGSIPALNNLEEALKAEQKAP
Sbjct: 481 ARRKRIAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGSIPALNNLEEALKAEQKAP 540

Query: 541 PGTARRKRRSESRKQFANSGTRPSPRGFGSGN 573
           PGTARRKRRSES KQ  NSGTRPSPRGFGSGN
Sbjct: 541 PGTARRKRRSESMKQLLNSGTRPSPRGFGSGN 572

[Close]

BLAST of Pay0009216.1 vs. NCBI nr
Match: KAG6604345.1 (Signal recognition particle 54 kDa protein, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 1029.6 bits (2661), Expect = 1.0e-296
Identity = 547/572 (95.63%), Postives = 558/572 (97.55%), Query Frame = 0


Query: 1   MEGLQISTVASRHLNSNSQSNCASRGLCHGSNCARKSLSISSSWLGSSNLKSLSSRNLFT 60
           ME LQIS V+SRHL SNSQS CASR LCHGSNC RKS SISSSWLGSSNLKSLSSRNLF 
Sbjct: 1   MEALQISIVSSRHLASNSQSPCASRSLCHGSNCGRKSSSISSSWLGSSNLKSLSSRNLFA 60

Query: 61  REIWGWLHAKTANTRRDMRGVVRAEMFGQLTSGLEAAWNKLKGEEVLTKENIVEPMRDIR 120
           REIWGWLHAKTANTRRDMRGVVRAEMFGQLT GLEAAWNKLKGEEVL+KENIVEPMRDIR
Sbjct: 61  REIWGWLHAKTANTRRDMRGVVRAEMFGQLTGGLEAAWNKLKGEEVLSKENIVEPMRDIR 120

Query: 121 RALLEADVSLPVVRRFVQAVSDQAVGVGVIRGVRPDQQLVKIVHDELVKLMGGEVSELVF 180
           RALLEADVSLPVVRRFVQAVSDQAVGVGVIRGV+PDQQLVKIVHDELVKLMGGEVSELVF
Sbjct: 121 RALLEADVSLPVVRRFVQAVSDQAVGVGVIRGVKPDQQLVKIVHDELVKLMGGEVSELVF 180

Query: 181 SKSGPTVILLAGLQGVGKTTVCAKLANYLKKQGKSCMLVAGDVYRPAAIDQLVILGEQVR 240
           SKSGPTVILLAGLQGVGKTTVCAKLANYLKKQGKSCMLVAGDVYRPAAIDQLVILGEQV 
Sbjct: 181 SKSGPTVILLAGLQGVGKTTVCAKLANYLKKQGKSCMLVAGDVYRPAAIDQLVILGEQVG 240

Query: 241 VPVYTAGTEVKPSDIAKQGLQEARKNKVDVVIVDTAGRLQIDKAMMDELKEVKRVINPTE 300
           VPVYTAGTEVKPSDIAKQGLQEARKNKVDVVIVDTAGRLQIDKAMMDELKEVKR INPTE
Sbjct: 241 VPVYTAGTEVKPSDIAKQGLQEARKNKVDVVIVDTAGRLQIDKAMMDELKEVKRAINPTE 300

Query: 301 VLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRG 360
           VLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRG
Sbjct: 301 VLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRG 360

Query: 361 ERMDDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMRQEDAEELQKKILSAKFDFNDFLKQ 420
           ERM+DLEPFYPDRMAGRILGMGDVLSFVEKAQEVMRQEDAE+LQKKI+SAKFDFNDFLKQ
Sbjct: 361 ERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMRQEDAEDLQKKIMSAKFDFNDFLKQ 420

Query: 421 TRAVARMGSMTRVIGMIPGMGKVTPSQVREAEKSLKIMESMIEAMTPEEREKPELLAESP 480
           TRAVARMGSMTRV+GMIPGMGKVTP+Q+REAEKSLKIME+MIEAMTPEEREKPELLAESP
Sbjct: 421 TRAVARMGSMTRVLGMIPGMGKVTPAQIREAEKSLKIMEAMIEAMTPEEREKPELLAESP 480

Query: 481 ARRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGSIPALNNLEEALKAEQKAP 540
           ARRKR+AQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGSIPALNNLEEALKAEQKAP
Sbjct: 481 ARRKRIAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGSIPALNNLEEALKAEQKAP 540

Query: 541 PGTARRKRRSESRKQFANSGTRPSPRGFGSGN 573
           PGTARRKRRSES KQ  NSGTRPSPRGFGSGN
Sbjct: 541 PGTARRKRRSESMKQLLNSGTRPSPRGFGSGN 572

[Close]

BLAST of Pay0009216.1 vs. TAIR 10
Match: AT5G03940.1 (chloroplast signal recognition particle 54 kDa subunit )

HSP 1 Score: 850.1 bits (2195), Expect = 1.0e-246
Identity = 457/549 (83.24%), Postives = 504/549 (91.80%), Query Frame = 0


Query: 28  CHGSNCARKSLSISSSWLGSS-NLKSL-SSRNLFTREIWGWLHAKT-ANTRRDMRGVVRA 87
           C G+   R   + SS++ G + N  SL SSRNL TREIW W+ +KT     R  R  VRA
Sbjct: 18  CTGNR--RIKAAFSSAFTGGTINSASLSSSRNLSTREIWSWVKSKTVVGHGRYRRSQVRA 77

Query: 88  EMFGQLTSGLEAAWNKLKGEEVLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSDQA 147
           EMFGQLT GLEAAW+KLKGEEVLTK+NI EPMRDIRRALLEADVSLPVVRRFVQ+VSDQA
Sbjct: 78  EMFGQLTGGLEAAWSKLKGEEVLTKDNIAEPMRDIRRALLEADVSLPVVRRFVQSVSDQA 137

Query: 148 VGVGVIRGVRPDQQLVKIVHDELVKLMGGEVSELVFSKSGPTVILLAGLQGVGKTTVCAK 207
           VG+GVIRGV+PDQQLVKIVHDELVKLMGGEVSEL F+KSGPTVILLAGLQGVGKTTVCAK
Sbjct: 138 VGMGVIRGVKPDQQLVKIVHDELVKLMGGEVSELQFAKSGPTVILLAGLQGVGKTTVCAK 197

Query: 208 LANYLKKQGKSCMLVAGDVYRPAAIDQLVILGEQVRVPVYTAGTEVKPSDIAKQGLQEAR 267
           LA YLKKQGKSCML+AGDVYRPAAIDQLVILGEQV VPVYTAGT+VKP+DIAKQGL+EA+
Sbjct: 198 LACYLKKQGKSCMLIAGDVYRPAAIDQLVILGEQVGVPVYTAGTDVKPADIAKQGLKEAK 257

Query: 268 KNKVDVVIVDTAGRLQIDKAMMDELKEVKRVINPTEVLLVVDAMTGQEAAALVTTFNIEI 327
           KN VDVVI+DTAGRLQIDK MMDELK+VK+ +NPTEVLLVVDAMTGQEAAALVTTFN+EI
Sbjct: 258 KNNVDVVIMDTAGRLQIDKGMMDELKDVKKFLNPTEVLLVVDAMTGQEAAALVTTFNVEI 317

Query: 328 GITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMDDLEPFYPDRMAGRILGMGDV 387
           GITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERM+DLEPFYPDRMAGRILGMGDV
Sbjct: 318 GITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDV 377

Query: 388 LSFVEKAQEVMRQEDAEELQKKILSAKFDFNDFLKQTRAVARMGSMTRVIGMIPGMGKVT 447
           LSFVEKA EVMRQEDAE+LQKKI+SAKFDFNDFLKQTRAVA+MGSMTRV+GMIPGMGKV+
Sbjct: 378 LSFVEKATEVMRQEDAEDLQKKIMSAKFDFNDFLKQTRAVAKMGSMTRVLGMIPGMGKVS 437

Query: 448 PSQVREAEKSLKIMESMIEAMTPEEREKPELLAESPARRKRVAQDSGKTEQQVSQLVAQL 507
           P+Q+REAEK+L +ME+MIE MTPEERE+PELLAESP RRKR+A+DSGKTEQQVS LVAQ+
Sbjct: 438 PAQIREAEKNLLVMEAMIEVMTPEERERPELLAESPERRKRIAKDSGKTEQQVSALVAQI 497

Query: 508 FQMRVRMKNLMGVMEGGSIPALNNLEEALKAEQKAPPGTARRKRRSESRKQFANS-GTRP 567
           FQMRV+MKNLMGVMEGGSIPAL+ LE+ALKAEQKAPPGTARRKR+++SRK+F  S  ++P
Sbjct: 498 FQMRVKMKNLMGVMEGGSIPALSGLEDALKAEQKAPPGTARRKRKADSRKKFVESASSKP 557

Query: 568 SPRGFGSGN 573
            PRGFGSGN
Sbjct: 558 GPRGFGSGN 564

[Close]

BLAST of Pay0009216.1 vs. TAIR 10
Match: AT1G48900.1 (Signal recognition particle, SRP54 subunit protein )

HSP 1 Score: 207.2 bits (526), Expect = 3.5e-53
Identity = 135/466 (28.97%), Postives = 238/466 (51.07%), Query Frame = 0


Query: 81  VVRAEMFGQLTSGLEAAWNKLKGEEVLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAV 140
           +V AE+ G++T  ++    ++    ++ ++ + E + +I RALL++DVS P+V+     +
Sbjct: 1   MVLAELGGRITRAIQ----QMSNVTIIDEKALNECLNEITRALLQSDVSFPLVKEMQSNI 60

Query: 141 SDQAVGVGVIRGVRPDQQLVKIVHDELVKLMGGEVSELVFSKSGPTVILLAGLQGVGKTT 200
                   +  G    + + + +  EL K++          K+  +V++  GLQG GKTT
Sbjct: 61  KKIVNLEDLAAGHNKRRIIEQAIFSELCKMLDPGKPAFAPKKAKASVVMFVGLQGAGKTT 120

Query: 201 VCAKLANYLKKQGKSCMLVAGDVYRPAAIDQLVILGEQVRVPVYTAGTEVKPSDIAKQGL 260
            C K A Y +K+G    LV  D +R  A DQL     + ++P Y + TE  P  IA +G+
Sbjct: 121 TCTKYAYYHQKKGYKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVKIAVEGV 180

Query: 261 QEARKNKVDVVIVDTAGRLQIDKAMMDELKEVKRVINPTEVLLVVDAMTGQEAAALVTTF 320
              +K   D++IVDT+GR + + ++ +E+++V     P  V+ V+D+  GQ A      F
Sbjct: 181 DTFKKENCDLIIVDTSGRHKQEASLFEEMRQVAEATKPDLVIFVMDSSIGQAAFDQAQAF 240

Query: 321 NIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMDDLEPFYPDRMAGRILG 380
              + +   I+TK+DG ++GG ALS    +  P+  +G GE MD+ E F       R+LG
Sbjct: 241 KQSVAVGAVIITKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLG 300

Query: 381 MGDVLSFVEKAQEVMRQEDAEELQKKILSAKFDFNDFLKQTRAVARMGSMTRVIGMIPGM 440
           MGD   FV+K QEV+ ++   EL +K+    F       Q + +  MG +  V  M+PG+
Sbjct: 301 MGDWSGFVDKLQEVVPKDQQPELLEKLSQGNFTLRIMYDQFQNILNMGPLKEVFSMLPGI 360

Query: 441 GKVTPSQVREAEKSLKIME--SMIEAMTPEEREKPELLAESPARRKRVAQDSGKTEQQVS 500
                 +  E E   KI    +M+++MT +E +       + +R  R+A+ SG+  ++V 
Sbjct: 361 SAEMMPKGHEKESQAKIKRYMTMMDSMTNDELDSSNPKVFNESRMMRIARGSGRQVREVM 420

Query: 501 QLVAQ---LFQMRVRMKNLMGVMEGGSIPALNNLEEALKAEQKAPP 542
           +++ +   L ++  +MK L  + + G + AL+    A    +  PP
Sbjct: 421 EMLEEYKRLAKIWSKMKGLK-IPKNGDMSALSRNMNAQHMSKVLPP 461

[Close]

BLAST of Pay0009216.1 vs. TAIR 10
Match: AT1G48900.2 (Signal recognition particle, SRP54 subunit protein )

HSP 1 Score: 204.5 bits (519), Expect = 2.2e-52
Identity = 125/422 (29.62%), Postives = 218/422 (51.66%), Query Frame = 0


Query: 81  VVRAEMFGQLTSGLEAAWNKLKGEEVLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAV 140
           +V AE+ G++T  ++    ++    ++ ++ + E + +I RALL++DVS P+V+     +
Sbjct: 1   MVLAELGGRITRAIQ----QMSNVTIIDEKALNECLNEITRALLQSDVSFPLVKEMQSNI 60

Query: 141 SDQAVGVGVIRGVRPDQQLVKIVHDELVKLMGGEVSELVFSKSGPTVILLAGLQGVGKTT 200
                   +  G    + + + +  EL K++          K+  +V++  GLQG GKTT
Sbjct: 61  KKIVNLEDLAAGHNKRRIIEQAIFSELCKMLDPGKPAFAPKKAKASVVMFVGLQGAGKTT 120

Query: 201 VCAKLANYLKKQGKSCMLVAGDVYRPAAIDQLVILGEQVRVPVYTAGTEVKPSDIAKQGL 260
            C K A Y +K+G    LV  D +R  A DQL     + ++P Y + TE  P  IA +G+
Sbjct: 121 TCTKYAYYHQKKGYKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVKIAVEGV 180

Query: 261 QEARKNKVDVVIVDTAGRLQIDKAMMDELKEVKRVINPTEVLLVVDAMTGQEAAALVTTF 320
              +K   D++IVDT+GR + + ++ +E+++V     P  V+ V+D+  GQ A      F
Sbjct: 181 DTFKKENCDLIIVDTSGRHKQEASLFEEMRQVAEATKPDLVIFVMDSSIGQAAFDQAQAF 240

Query: 321 NIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMDDLEPFYPDRMAGRILG 380
              + +   I+TK+DG ++GG ALS    +  P+  +G GE MD+ E F       R+LG
Sbjct: 241 KQSVAVGAVIITKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLG 300

Query: 381 MGDVLSFVEKAQEVMRQEDAEELQKKILSAKFDFNDFLKQTRAVARMGSMTRVIGMIPGM 440
           MGD   FV+K QEV+ ++   EL +K+    F       Q + +  MG +  V  M+PG+
Sbjct: 301 MGDWSGFVDKLQEVVPKDQQPELLEKLSQGNFTLRIMYDQFQNILNMGPLKEVFSMLPGI 360

Query: 441 GKVTPSQVREAEKSLKIME--SMIEAMTPEEREKPELLAESPARRKRVAQDSGKTEQQVS 500
                 +  E E   KI    +M+++MT +E +       + +R  R+A+ SG+  ++V 
Sbjct: 361 SAEMMPKGHEKESQAKIKRYMTMMDSMTNDELDSSNPKVFNESRMMRIARGSGRQVREVM 418

[Close]

BLAST of Pay0009216.1 vs. TAIR 10
Match: AT1G15310.1 (signal recognition particle 54 kDa subunit )

HSP 1 Score: 189.1 bits (479), Expect = 9.7e-48
Identity = 125/455 (27.47%), Postives = 227/455 (49.89%), Query Frame = 0


Query: 81  VVRAEMFGQLTSGLEAAWNKLKGEEVLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAV 140
           +V AE+ G++T  ++    ++    ++ ++ + + + +I RALL++DVS  +V +    +
Sbjct: 1   MVLAELGGRITRAIQ----QMNNVTIIDEKVLNDFLNEITRALLQSDVSFGLVEKMQTNI 60

Query: 141 SDQAVGVGVIRGVRPDQQLVKIVHDELVKLMGGEVSELVFSKSGPTVILLAGLQGVGKTT 200
                   +  G      + + +  EL +++          K+ P+V++  GLQG GKTT
Sbjct: 61  KKIVNLDDLAAGHNKRLIIEQAIFKELCRMLDPGKPAFAPKKAKPSVVMFVGLQGAGKTT 120

Query: 201 VCAKLANYLKKQGKSCMLVAGDVYRPAAIDQLVILGEQVRVPVYTAGTEVKPSDIAKQGL 260
            C K A Y +K+G    LV  D +R  A DQL     + ++P Y + TE  P  IA +G+
Sbjct: 121 TCTKYAYYHQKKGYKAALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVKIAVEGV 180

Query: 261 QEARKNKVDVVIVDTAGRLQIDKAMMDELKEVKRVINPTEVLLVVDAMTGQEAAALVTTF 320
              +K K D++IVDT+GR +   ++ +E+++V     P  V+ V+D+  GQ A      F
Sbjct: 181 DRFKKEKCDLIIVDTSGRHKQAASLFEEMRQVAEATEPDLVIFVMDSSIGQAAFEQAEAF 240

Query: 321 NIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMDDLEPFYPDRMAGRILG 380
              + +   I+TK+DG ++GG ALS    +  P+  +G GE MD+ E F       R+LG
Sbjct: 241 KETVSVGAVIITKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLG 300

Query: 381 MGDVLSFVEKAQEVMRQEDAEELQKKILSAKFDFNDFLKQTRAVARMGSMTRVIGMIPGM 440
            GD    V+K QEV+ ++   EL + +    F       Q +   R+  + ++  M+PG+
Sbjct: 301 KGDWSGLVDKLQEVVPKDLQNELVENLSQGNFTLRSMYDQFQCSLRI-PLNQLFSMLPGI 360

Query: 441 G--KVTPSQVREAEKSLKIMESMIEAMTPEEREKPELLAESPARRKRVAQDSGKTEQQVS 500
               +      E+   +K   +M+++MT +E + P     + +R  R+A+ SG+      
Sbjct: 361 SAEMMPKGHGEESRVKMKRYMTMMDSMTNKELDSPNPKIFNESRIMRIARGSGR------ 420

Query: 501 QLVAQLFQMRVRMKNLMGVMEGGSIPALNNLEEAL 534
            LV ++ +M    K +   M+G  IP   ++ + +
Sbjct: 421 -LVREVMEMLEEYKRIAKTMKGIKIPKNGDMSKVI 443

[Close]

BLAST of Pay0009216.1 vs. TAIR 10
Match: AT5G49500.1 (Signal recognition particle, SRP54 subunit protein )

HSP 1 Score: 183.7 bits (465), Expect = 4.1e-46
Identity = 123/466 (26.39%), Postives = 233/466 (50.00%), Query Frame = 0


Query: 81  VVRAEMFGQLTSGLEAAWNKLKGEEVLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAV 140
           +V AE+ G++ S ++    K+    ++ ++ + + + +I RALL++DVS P+V+     +
Sbjct: 1   MVLAELGGRIMSAIQ----KMNNVTIIDEKALNDCLNEITRALLQSDVSFPLVKEMQTNI 60

Query: 141 SDQAVGVGVIRGVRPDQQLVKIVHDELVKLMGGEVSELVFSKSGPTVILLAGLQG--VGK 200
                   +  G    + + + +  EL K++    S     K+ P+V++  GLQG  + K
Sbjct: 61  KKIVNLEDLAAGHNKRRIIEQAIFSELCKMLDPGKSAFAPKKAKPSVVMFVGLQGEVLEK 120

Query: 201 TTVCAKLANYLKKQGKSCMLVAGDVYRPAAIDQLVILGEQVRVPVYTAGTEVKPSDIAKQ 260
             +   +   ++++G    LV  D +R  A DQL     + ++P Y + T   P  IA +
Sbjct: 121 PQLVPSMLIIIRRKGYKPALVCADTFRAGAFDQLKQNATKSKIPYYGSYTGSDPVKIAVE 180

Query: 261 GLQEARKNKVDVVIVDTAGRLQIDKAMMDELKEVKRVINPTEVLLVVDAMTGQEAAALVT 320
           G+   +K   D++IVDT+GR +   ++ +E++++     P  V+ V+D+  GQ A     
Sbjct: 181 GVDRFKKENCDLIIVDTSGRHKQQASLFEEMRQISEATKPDLVIFVMDSSIGQTAFEQAR 240

Query: 321 TFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMDDLEPFYPDRMAGRI 380
            F   + +   I+TK+DG ++GG  LS    +  P+  +G GE MD+ E F       R+
Sbjct: 241 AFKQTVAVGAVIITKMDGHAKGGGTLSAVAATKSPVIFIGTGEHMDEFEVFDAKPFVSRL 300

Query: 381 LGMGDVLSFVEKAQEVMRQEDAEELQKKILSAKFDFNDFLKQTRAVARMGSMTRVIGMIP 440
           LG GD+  FV K QEV+ ++   EL + +   KF       Q + +  MG +  V  M+P
Sbjct: 301 LGNGDMSGFVNKLQEVVPKDQQPELLEMLSHGKFTLRIMYDQFQNMLNMGPLKEVFSMLP 360

Query: 441 GMGKVTPSQVREAEKSLKIME--SMIEAMTPEEREKPELLAESPARRKRVAQDSGKTEQQ 500
           GM      +  E E   KI    +M+++MT EE +       + +R  R+A+ SG+  ++
Sbjct: 361 GMRAEMMPEGHEKESQAKIKRYMTMMDSMTNEELDSSNPKVFNESRIMRIARGSGRIVRE 420

Query: 501 VSQLVAQLFQMRVRMKNLMGV--MEGGSIPALNNLEEALKAEQKAP 541
           V +++ +  ++      + G+  +E G++ AL+  + + +  +  P
Sbjct: 421 VMEMLEEYKRLTTMWGKVKGLKNLEKGNMSALSKNKNSQQLSKVLP 462

The following BLAST results are available for this feature:

BLAST of Pay0009216.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P37107	1.4e-245	83.24	Signal recognition particle 54 kDa protein, chloroplastic OS=Arabidopsis thalian...	[more]
Q55311	3.1e-131	52.59	Signal recognition particle protein OS=Synechococcus elongatus (strain PCC 7942 ...	[more]
P74214	2.6e-130	56.29	Signal recognition particle protein OS=Synechocystis sp. (strain PCC 6803 / Kazu...	[more]
P37105	9.0e-107	46.79	Signal recognition particle protein OS=Bacillus subtilis (strain 168) OX=224308 ...	[more]
Q54431	6.5e-105	46.79	Signal recognition particle protein OS=Streptococcus mutans serotype c (strain A...	[more]

BLAST of Pay0009216.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3CHA2	8.5e-310	100.00	signal recognition particle 54 kDa protein, chloroplastic isoform X1 OS=Cucumis ...	[more]
A0A5D3C7H8	8.5e-310	100.00	Signal recognition particle 54 kDa protein OS=Cucumis melo var. makuwa OX=119469...	[more]
A0A0A0KIP4	3.5e-303	98.08	Signal recognition particle protein OS=Cucumis sativus OX=3659 GN=Csa_6G452680 P...	[more]
A0A6J1IRE1	2.2e-297	95.80	signal recognition particle 54 kDa protein, chloroplastic OS=Cucurbita maxima OX...	[more]
A0A6J1EJP1	2.2e-297	95.80	signal recognition particle 54 kDa protein, chloroplastic OS=Cucurbita moschata ...	[more]

BLAST of Pay0009216.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008462577.1	1.8e-309	100.00	PREDICTED: signal recognition particle 54 kDa protein, chloroplastic isoform X1 ...	[more]
XP_004143384.1	7.2e-303	98.08	signal recognition particle 54 kDa protein, chloroplastic [Cucumis sativus] >KGN...	[more]
XP_038882869.1	9.7e-300	97.03	signal recognition particle 54 kDa protein, chloroplastic [Benincasa hispida]	[more]
XP_022925955.1	4.5e-297	95.80	signal recognition particle 54 kDa protein, chloroplastic [Cucurbita moschata] >...	[more]
KAG6604345.1	1.0e-296	95.63	Signal recognition particle 54 kDa protein, chloroplastic, partial [Cucurbita ar...	[more]

BLAST of Pay0009216.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G03940.1	1.0e-246	83.24	chloroplast signal recognition particle 54 kDa subunit	[more]
AT1G48900.1	3.5e-53	28.97	Signal recognition particle, SRP54 subunit protein	[more]
AT1G48900.2	2.2e-52	29.62	Signal recognition particle, SRP54 subunit protein	[more]
AT1G15310.1	9.7e-48	27.47	signal recognition particle 54 kDa subunit	[more]
AT5G49500.1	4.1e-46	26.39	Signal recognition particle, SRP54 subunit protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Payzawat) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR013822	Signal recognition particle SRP54, helical bundle	SMART	SM00963	SRP54_N_2	coord: 86..171 e-value: 5.3E-29 score: 112.3
IPR013822	Signal recognition particle SRP54, helical bundle	PFAM	PF02881	SRP54_N	coord: 90..167 e-value: 6.7E-18 score: 64.6
IPR003593	AAA+ ATPase domain	SMART	SM00382	AAA_5	coord: 184..328 e-value: 9.9E-12 score: 55.0
IPR000897	Signal recognition particle, SRP54 subunit, GTPase domain	SMART	SM00962	SRP54_3	coord: 185..380 e-value: 9.7E-112 score: 387.2
IPR000897	Signal recognition particle, SRP54 subunit, GTPase domain	PFAM	PF00448	SRP54	coord: 185..380 e-value: 5.6E-78 score: 261.1
IPR000897	Signal recognition particle, SRP54 subunit, GTPase domain	PROSITE	PS00300	SRP54	coord: 353..366
IPR004125	Signal recognition particle, SRP54 subunit, M-domain	PFAM	PF02978	SRP_SPB	coord: 411..509 e-value: 2.5E-24 score: 85.8
IPR036891	Signal recognition particle, SRP54 subunit, M-domain superfamily	GENE3D	1.10.260.30		coord: 391..515 e-value: 4.1E-36 score: 126.0
IPR036891	Signal recognition particle, SRP54 subunit, M-domain superfamily	SUPERFAMILY	47446	Signal peptide-binding domain	coord: 411..512
IPR042101	Signal recognition particle SRP54, N-terminal domain superfamily	GENE3D	1.20.120.140		coord: 89..390 e-value: 6.3E-120 score: 401.6
IPR027417	P-loop containing nucleoside triphosphate hydrolase	GENE3D	3.40.50.300		coord: 175..369 e-value: 6.3E-120 score: 401.6
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	52540	P-loop containing nucleoside triphosphate hydrolases	coord: 127..438
IPR004780	Signal recognition particle protein	TIGRFAM	TIGR00959	TIGR00959	coord: 88..512 e-value: 8.1E-168 score: 556.6
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 556..572
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 465..495
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 534..572
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 465..490
None	No IPR available	PANTHER	PTHR11564:SF35	BNAC02G02820D PROTEIN	coord: 60..572
None	No IPR available	CDD	cd18539	SRP_G	coord: 186..378 e-value: 3.4582E-120 score: 351.131
IPR022941	Signal recognition particle, SRP54 subunit	PANTHER	PTHR11564	SIGNAL RECOGNITION PARTICLE 54K PROTEIN SRP54	coord: 60..572
IPR022941	Signal recognition particle, SRP54 subunit	HAMAP	MF_00306	SRP54	coord: 90..527 score: 32.61985

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Pay0009216	Pay0009216	gene

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Pay0009216.1-five_prime_utr	Pay0009216.1-five_prime_utr-chr08:6013824..6013868	five_prime_UTR

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Pay0009216.1-exon	Pay0009216.1-exon-chr08:6013824..6014048	exon
Pay0009216.1-exon	Pay0009216.1-exon-chr08:6014418..6014550	exon
Pay0009216.1-exon	Pay0009216.1-exon-chr08:6015042..6015109	exon
Pay0009216.1-exon	Pay0009216.1-exon-chr08:6015189..6015290	exon
Pay0009216.1-exon	Pay0009216.1-exon-chr08:6015842..6015994	exon
Pay0009216.1-exon	Pay0009216.1-exon-chr08:6016131..6016208	exon
Pay0009216.1-exon	Pay0009216.1-exon-chr08:6017220..6017345	exon
Pay0009216.1-exon	Pay0009216.1-exon-chr08:6017469..6017571	exon
Pay0009216.1-exon	Pay0009216.1-exon-chr08:6017669..6017769	exon
Pay0009216.1-exon	Pay0009216.1-exon-chr08:6017945..6018082	exon
Pay0009216.1-exon	Pay0009216.1-exon-chr08:6018152..6018295	exon
Pay0009216.1-exon	Pay0009216.1-exon-chr08:6018486..6018561	exon
Pay0009216.1-exon	Pay0009216.1-exon-chr08:6019034..6019119	exon
Pay0009216.1-exon	Pay0009216.1-exon-chr08:6019246..6019371	exon
Pay0009216.1-exon	Pay0009216.1-exon-chr08:6019502..6020148	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Pay0009216.1-cds	Pay0009216.1-cds-chr08:6013869..6014048	CDS
Pay0009216.1-cds	Pay0009216.1-cds-chr08:6014418..6014550	CDS
Pay0009216.1-cds	Pay0009216.1-cds-chr08:6015042..6015109	CDS
Pay0009216.1-cds	Pay0009216.1-cds-chr08:6015189..6015290	CDS
Pay0009216.1-cds	Pay0009216.1-cds-chr08:6015842..6015994	CDS
Pay0009216.1-cds	Pay0009216.1-cds-chr08:6016131..6016208	CDS
Pay0009216.1-cds	Pay0009216.1-cds-chr08:6017220..6017345	CDS
Pay0009216.1-cds	Pay0009216.1-cds-chr08:6017469..6017571	CDS
Pay0009216.1-cds	Pay0009216.1-cds-chr08:6017669..6017769	CDS
Pay0009216.1-cds	Pay0009216.1-cds-chr08:6017945..6018082	CDS
Pay0009216.1-cds	Pay0009216.1-cds-chr08:6018152..6018295	CDS
Pay0009216.1-cds	Pay0009216.1-cds-chr08:6018486..6018561	CDS
Pay0009216.1-cds	Pay0009216.1-cds-chr08:6019034..6019119	CDS
Pay0009216.1-cds	Pay0009216.1-cds-chr08:6019246..6019371	CDS
Pay0009216.1-cds	Pay0009216.1-cds-chr08:6019502..6019606	CDS

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Pay0009216.1-three_prime_utr	Pay0009216.1-three_prime_utr-chr08:6019607..6020148	three_prime_UTR

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Pay0009216.1	Pay0009216.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006614	SRP-dependent cotranslational protein targeting to membrane
biological_process	GO:0070208	protein heterotrimerization
cellular_component	GO:0048500	signal recognition particle
cellular_component	GO:0005786	signal recognition particle, endoplasmic reticulum targeting
molecular_function	GO:0008312	7S RNA binding
molecular_function	GO:0003924	GTPase activity
molecular_function	GO:0005525	GTP binding
molecular_function	GO:0019904	protein domain specific binding