Pay0008775.1 (mRNA) Melon (Payzawat) v1
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Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.GAAAGTCAAAGCCTACCTAGCTCGAAGCATTTTTGGAGCTTCATCTTTGAAACGAACTTGGTGAGCATGTCAGCAGCATTTTCAAAGGTATGAACCTTGAGAAATTCAATTTCTCTTGCTTCAATTTTTTCACGGATGAAATGAAATTTTATATCTATATGTTTTATTCAAGATGCCTACACAACTCCCAATGTGTACATGCACGTGGCGTCAGTAGAAAGAAATCAATTAAATAACGATTATGTTTCTCCTGACGCCATGCATGTACACGTTGGGAGTTGTGTACGCATTCTCGACGTTTTAGTAATGGCGTCGGGAATGTTGGGGAACTTATGACGCTTATCTTGGTGCATCGGGAGTTCTTATATAAAATCCTCTTCTAGATCTGTCATTTACAAATCTAGAAGAGAATGTGCCTGAAAGATGAAGATGAAGTGACCACCACCGCTTGTGGTTCACCATCAACATGTTGGAATTTATGTCCTAAAACTTGTTGTTTGTAGTTTAAATTATATTATATTCAAAATAGTAGTTATTGAGGACTTATTAGTAAAAATAGAATATTATAATCTTGAATTCCATAAACTAATGTCTCACTAGAAGAAATATGGTCTTTAATGTCGGTTGAAAAAAATGAAAACGGAGCTTTAATGTCGCTTTTTAAAATGTGCATGTTTAATGTCGGTTTTAAACCGACATTAAAGAGCGAGCTTTAATGTCGGTTTTAAACCGACATTAAAGATATAGTTAACTTTTTTTTTTAATTTTTTAAAAACTTAAGTATCTTCTCTCTTACTTTACTCTTTTCTTTCTCACGATGCTATGCCACATGATTTCTTCCCTCTCCTTATCAATTTCTTCCATCTCTTATCAATCTCACTTTCAACCCTCTCTTCTCTGGCGAATAGTCACCGCCCACACAGTTGTCGTCGTCCCTCGTGCCCAGCCACCGTTGCGTCTGTCACTGTTATGCTCGTTCGTTGTCCTTGTTCCTTACGTTTGCGCGTTCATGTCCAGCCTTCGTTACCATCGTGCCCAGCCCTTTCGTCGACCACTAGCCGCTAAATAGGTTTTCCTACTCTTTCGTCCTGGTTTGTGTGGGTTTATGGTGTATACAAGAATAGGTGAAGCTGAGGCCGACGATGGCGATGGTGGTGGATATGCTTGAAGGTCGCGTTGCGGTAGAGGAGCCGCCGGGTACTGAAGTGCTCATCGTTGATTTGTTGTCGATTGATGAAGAGATGATGAATAGTGACGAGAAACTGAAGATTGTTCCGTTTAAAGAACGGATGGACGATAGAAATGTTCCTTCGTCTTCATCGACGTCGTGCTCTTACGTCTTCTCTATACTCTCCGCCCGGTGAGGTAAGGCGGACGGTGGGCGGTCGTCGCTCTCCCTTTGACTTTGCCCTAACGGTCTAACCAAAATCCTGAAATTGCACACGTCGTCTTCTTTTTATTCTACAATTTATTATTTTTTTTTGGCAATTTTTTTTAATTAAAAGATTTGATAAATGAAATATAAATTTTCCCTCCTAACTTCTTAATAACTTTTCAATAATGTACATAAACTGCCTTACAAATTTCATATTTATAAACTAACCAATACATTTTTGGGAAAAAAAAAGAAAAAGAAAAAGAAACATTATTATTGTTTCTGTCGATTTGTGTTAATTTCTTTAACCTAATTGTTGCATTGCTTGACATTAAATTACTATTTTTTGTTATTCGGTCAAATTTTTATGTCTCTTTTTCTCTTATATTTTTATTGTACTAACTATCTTTTAACATCATTCTTCACTCATCTATGATTTGGAATGAAAACCATCTTGTTGAAATAAGTTCTAACGTTTGTGTTTATTTTTTATGTTGTAATAAAAATATTTTTTATTAGTTTTATATATGAACATATGAATGTGCTATTATTGTTAGTGAAAAATATATGTCTCAGTTAGTTTGGTTGATTTTAGAGTTACTGTAATTGATGGTCTGAGGTATGGTTGAATTGGCAACTGTTTATGGTTTTAATGCCAGCTAAAAATTCGGTTTTGTTCTGTGCATTATGATAAAATCATTTATGTTCCACCGTCCTTACTATGTTGGCTAGACCTGAACATATAAAAGAGAATTGTGTTGCATTGTTTTGATAGATTCAACTAGTAGTGTTGGTAATAATAGTATATCAATATCAAGAATTAAGAGTTTGGTGGAGATATTAATAAGCATAATCTAATAGGTGAGTTGGGTGGTGGAGGATCTGTTATGCTTGCAGCGAGGGGGGAAGGTCTCTTGTCTTGGATTGAAGATGACAGTTTCATTGTGGATGAAATAGTCACTGCAATTCCTGAGGTAATCAGTTGGTTATTAGTATTTCTTTGTGTTGAGAATAATATAAAGTAGTACTTTTTGATTAGTGAAAACCATTTTTGATATGTTTTGTAAATAGTTTCATTTTTTTGTGCTATTCATAATTATTTCCCTACTTTTTTTGTATTGACTTTGTATTCTTTCATTTGTTCTGAAAGTAGTTATTTCTATTAAAAAATGTTGGGAATCTAAGCATGGAATCTTAAATATGAATCATACTGTGTTCAAGAAAAAATAATTAGAATGTTTATTTTATTTTTTATTTTTTTGGACACCACCACTATTACTTGATTTGCTTAATAACATCATTTCCTATTCTTGCACAGGCTGTGTGGGCCTTAGGTAATGTTGCTGGTGACTCTCAAGTTGTAGGGATCTTGTTCTTAGCCATGGTGCACTAGTGCCGTTACTTGGTCAACTAAATGAGCACTCAAAATTATCCATGCTGAGAAATGTAACATGGACTTTATCTAATTTCTGTCGTAGGAAGCCTCCAACTCCTTTTGATCAGGTTTATTTCAGCTAACCTTTCGAGTTCAAGATCCAACTTTGAGTTTCTTCTAATATTTAAAACTGTTTTGGTGGTGACTTTATGTTTGGTTCTTTTGTTTGGCAATGAAAAGACTATTATGGTGGTGATTATTTCTCAAAACTTGACTTGGTTTTTGAAAAACATGAATAGAAAGTTGATAACAAAGCAAGAAATGTAGATATGATCACTTATTAGATGCTTGGATTTTTTTATGCACTTATATTTTTCAAGTAACTAAAGGAGAATTTGTTCATGGGAAGTTAACAAAATCTTGCCTTTGTTTGGAGCTATCATATCATCCTATTCTCGTAACTAACTGTGATTATGATATTGTTGGATTAAAGAATCACTTGAATGCTCAGTATTTTGGTGAGATTGGTATTGGTACTCCCCCTTAAAAGTTTAGTAATCAAATGTGAATATTTCTACTAGCAACTAGGTCATAACATTATTACTTATCAATTCAACCATCTTGATATCTTTTACAGGGAGCTATCACTAAACAAATGACTGCAATAGAAGAAATGGTTGCAAGTGAGTACAATTAGCCAGACCCTCATCTTTGTGACAAGATCTTGAAGATGGTCATTTGTGAA GAAAGTCAAAGCCTACCTAGCTCGAAGCATTTTTGGAGCTTCATCTTTGAAACGAACTTGGTGAGCATGTCAGCAGCATTTTCAAAGGTGAGTTGGGTGGTGGAGGATCTGTTATGCTTGCAGCGAGGGGGGAAGGTCTCTTGTCTTGGATTGAAGATGACAGTTTCATTGTGGATGAAATAGTCACTGCAATTCCTGAGGCTGTGTGGGCCTTAGGTAATGTTGCTGGTGACTCTCAAGTTGTAGGGATCTTGTTCTTAGCCATGGTGCACTAGTGCCGTTACTTGGTCAACTAAATGAGCACTCAAAATTATCCATGCTGAGAAATGTAACATGGACTTTATCTAATTTCTGTCGTAGGAAGCCTCCAACTCCTTTTGATCAGGGAGCTATCACTAAACAAATGACTGCAATAGAAGAAATGGTTGCAAGTGAGTACAATTAGCCAGACCCTCATCTTTGTGACAAGATCTTGAAGATGGTCATTTGTGAA ATGCTTGCAGCGAGGGGGGAAGGTCTCTTGTCTTGGATTGAAGATGACAGTTTCATTGTGGATGAAATAGTCACTGCAATTCCTGAGGCTGTGTGGGCCTTAGGTAATGTTGCTGGTGACTCTCAAGTTGTAGGGATCTTGTTCTTAGCCATGGTGCACTAG MLAARGEGLLSWIEDDSFIVDEIVTAIPEAVWALGNVAGDSQVVGILFLAMVH Homology
BLAST of Pay0008775.1 vs. ExPASy TrEMBL
Match: A0A5D3DL29 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold205G00920 PE=4 SV=1) HSP 1 Score: 107.1 bits (266), Expect = 2.3e-20 Identity = 53/53 (100.00%), Postives = 53/53 (100.00%), Query Frame = 0
BLAST of Pay0008775.1 vs. ExPASy TrEMBL
Match: A0A5A7T396 (Importin subunit alpha-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold191G00370 PE=4 SV=1) HSP 1 Score: 78.6 bits (192), Expect = 8.9e-12 Identity = 37/41 (90.24%), Postives = 38/41 (92.68%), Query Frame = 0
BLAST of Pay0008775.1 vs. ExPASy TrEMBL
Match: A0A5D3DG57 (Putative receptor-like protein kinase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold195G001270 PE=4 SV=1) HSP 1 Score: 71.2 bits (173), Expect = 1.4e-09 Identity = 35/42 (83.33%), Postives = 38/42 (90.48%), Query Frame = 0
BLAST of Pay0008775.1 vs. ExPASy TrEMBL
Match: A0A5D3DDV6 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold150G00290 PE=4 SV=1) HSP 1 Score: 63.2 bits (152), Expect = 3.9e-07 Identity = 30/30 (100.00%), Postives = 30/30 (100.00%), Query Frame = 0
BLAST of Pay0008775.1 vs. ExPASy TrEMBL
Match: A0A5A7UZV9 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold430G00330 PE=4 SV=1) HSP 1 Score: 59.7 bits (143), Expect = 4.3e-06 Identity = 28/30 (93.33%), Postives = 28/30 (93.33%), Query Frame = 0
BLAST of Pay0008775.1 vs. NCBI nr
Match: KAA0041447.1 (hypothetical protein E6C27_scaffold6G00200 [Cucumis melo var. makuwa] >TYK24321.1 hypothetical protein E5676_scaffold205G00920 [Cucumis melo var. makuwa]) HSP 1 Score: 107.1 bits (266), Expect = 4.8e-20 Identity = 53/53 (100.00%), Postives = 53/53 (100.00%), Query Frame = 0
BLAST of Pay0008775.1 vs. NCBI nr
Match: KAA0036536.1 (importin subunit alpha-like [Cucumis melo var. makuwa]) HSP 1 Score: 78.6 bits (192), Expect = 1.8e-11 Identity = 37/41 (90.24%), Postives = 38/41 (92.68%), Query Frame = 0
BLAST of Pay0008775.1 vs. NCBI nr
Match: TYK22681.1 (putative receptor-like protein kinase [Cucumis melo var. makuwa]) HSP 1 Score: 71.2 bits (173), Expect = 2.9e-09 Identity = 35/42 (83.33%), Postives = 38/42 (90.48%), Query Frame = 0
BLAST of Pay0008775.1 vs. NCBI nr
Match: TYK21630.1 (uncharacterized protein E5676_scaffold150G00290 [Cucumis melo var. makuwa]) HSP 1 Score: 63.2 bits (152), Expect = 8.0e-07 Identity = 30/30 (100.00%), Postives = 30/30 (100.00%), Query Frame = 0
BLAST of Pay0008775.1 vs. NCBI nr
Match: KAA0059125.1 (uncharacterized protein E6C27_scaffold430G00330 [Cucumis melo var. makuwa]) HSP 1 Score: 59.7 bits (143), Expect = 8.8e-06 Identity = 28/30 (93.33%), Postives = 28/30 (93.33%), Query Frame = 0
BLAST of Pay0008775.1 vs. TAIR 10
Match: AT5G44150.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 13 growth stages; Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). ) HSP 1 Score: 41.6 bits (96), Expect = 2.3e-04 Identity = 15/22 (68.18%), Postives = 22/22 (100.00%), Query Frame = 0
The following BLAST results are available for this feature:
Relationships
This mRNA is a part of the following gene feature(s):
The following five_prime_UTR feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
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