Pay0006500.1 (mRNA) Melon (Payzawat) v1

Overview


Name	Pay0006500.1
Type	mRNA
Organism	Cucumis melo L. var. inodorus cv. Payzawat (Melon (Payzawat) v1)
Description	Anaphase-promoting complex subunit 13
Location	chr11: 5792107 .. 5794904 (+)
Sequence length	1101
RNA-Seq Expression	Pay0006500.1
Synteny	Pay0006500.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AATTTATCGATAGAAGCAAAGCATAGTAATAACCCAACGATACTTATATAGTTTGTAGAAGAAATTACGTACCTTTCCTTTCAGTTCCATTCCCACTCTACATTTTTGGTCTCCTTCTGCTTTACTCACGCACTCGACAACTCTCCGCATTTCAAACAAGAACTTGGGCTTTGAAAGCCCAAAGTTGGCCTACTTTACAGATGGATGGTACTGCGTGTCCCTAAGGAAGAAGACACCGCCCCCGTCCTCAATTCCCAGCCCCAATTGAAGCTTCATCCGTCTTTGTCGTCCCTTAACGCAAGATTTCCACGCCGCCATTCCTCTTCATCAGTCGCCCACTATTTGCTCACGACTCATTGGCATTCCAGATCGCTCAGACTACTGGTTGGTGATTTGTCTCAGATCCGGCTGCATCCGGTGGCCGCCCTTCGATCCTTGACTCCAACTTCGGTAAGCATCGCTTGCCCCTCATATTAAATTTGTTTCATGACCTTCATAACCCAACATGAGACTCTTCCTCTAGATTTCCCCCACTTCGTTCTTCAATACTGAAGAAATTTTGCCAATTCACTATCTTCTCCTTCAACTTCATTATATCATACGTTCCCTTTCAAAAAAAATTAACTATCTGTGTATGACGGATAAGCATGTGGCAGATTCTCCAAGCTGAACATAAATTTCCACCCTCCATTGTACTTCCAAATTTTCACAATACGCTCCGTCTTGTTCCAATTTGGACGTATTTGGAAAAATATTTTTGATATTGATCGACATTTAGTAAATTTTTGGATCGTTTGTTAATAACTTATGAACTTATCTATCTGGAATTTCAGATATTGGGTTTTAGAACCTACCTTAATAAGAAAACACCAATGGCAGAACTTAGTCTGGGTATATTGATAGACATTCTAGATGAGGAATGGATGAGAGACACACTCCCTCATGATGGTAATTCTCAATCTTCATTTCTCTACAATCAAGAAATTAATTGTAACGAGCTATATGGCTTATTTAATCTAGTTTTTCTATCATTATCATAGATCTTTTACTCCCTCCCGTGCTGGTTGTTCGGGCTGATGACACTGAGGACTCAAGTATGTCCCCTAACTTATAACTCAATGTTCAGTTAGGAAAGATTGTTCCTTTAATTTTGGTAACACATTCGAACCTGAAGCGTTTTTTTGCACTCGATATTAAATTTGGTACATGGAGTTCCTAAGTCAAGAATTCTGCAATGCATTGATAGTGTTTTCGAAACTTCGGAAAATGGAAAGCAGGATGCTACAAATCTTGTTTTCTTTTTCTTTTTATATTCGTGAGTTTCTGGGCCAACTTATGCCTATCACAATAAATCTCACTTGTAATATCCTATGAGTTTCCTTGACATTTGGGTGTTAAGGATACTTATAGGATATTGAATCCTATTAGGCTACAATCCATTTCTCTTAGCCCTTTATCAAACTCAATACCCTTTATTACCATTGGCTCAACCCATGAAGATGCTTCAAAGTCAAATGTAATACTTGAGAGCGAAATGGTTGCAAAAAGTTTGTACCCTAGATTTTTCAAAGGCTGATTAAGCTAGCACTAAGAGACAACAGAAGCTTTTACTTTAGTGATTCTACAACCGAAAAATCTATATCCTAGATTTCGAAGGTATCTCCCAACATCAAAAGTGCTTACTACCACCCCTCCAATCTCAATGCCCTTCAAGGCCTTAAATTCTTGTGTTTACACCTGAAGGCTCAAGCTCAAGGCAGCCGTTCATTCCCCTCTTATAGCCTTCTTTTTCCTCATTATCACCTTTTGAGTTTTTGGCCTCTGAATATATTTTCTTCTTTTTGTCTTGTGGTCTAATGGTTATTGTGCAGTTGTGAAAATTGTGAATAGGAAGTAATAAACAGATCTTTAATCACTCTGTTAGAAGCACTAAAGAGCTGAGAAAGTTTGTTTTTGTCTCTACTTCTTACCGTCTCTAGTCTAAGATTTTGTTGTAATTATTGCTAAGTACTGCTTGTGTCAATTGAAAGACCTTCAATGTAATTCTAAGCTTGTCTAGGTACGTCGATTAAAAATTGAAAATATCCTTTTGGGCTAATTCACCACTTTCCTGATACCTCTTTGTTTTATTTCTTCTTCTTTCTGCCATCTATGATGTTGACACCTTAAAGTGCATCTTTCACTTAAAAAACACCATTCAATACCGAATAATATGAAAATTGAATAGTTTTTTCTCTCTATTTTTGGTTTGTCAATTGTAGCAATTTGCAGGAGAATTCATTTTTTGATCCCCTTCTTCTCTTAACTTCTTTGCAGATCAGGAGAGTCAGCCAGTTGATACTGATACTTGGCATGATCTTGCCCTAGGTAACCAATGAACCACCTTCTCCTAACTAAGGATGGTCTGTTTTCAAGAAACTTGCTTCAAGTTATAAATTTTATTATCATATTCTCTTGCTGTATTTGCATTGTAGAGTGTCATATTTCTATAAAATCCATGTTGTAGATTTAGGTAGAAAGTGTTTGTTTGTGGTAAAAGAAACTATGCAAGTGTTTGTTTGTGGTAAAAGAAACTATGTACATGTTGGTGGCTGTCAGTTAAGACTATTGACGGATTTGCTGTTCTCTTTTGTAATTTGTTGTGTGAAGACATTGAAATTTTATTTCTTATTATGAGATCTTTGTCCAATTCCATTTGTAAAAGACTTTAGAGTTGCTTCTAAACTTAATGGTTTTAAAGGAGTACTACCATCATTGTTTGGTACTTCAGTAAATAAAATTTTAATTATTCCTCTCCA

mRNA sequence

AATTTATCGATAGAAGCAAAGCATAGTAATAACCCAACGATACTTATATAGTTTGTAGAAGAAATTACGTACCTTTCCTTTCAGTTCCATTCCCACTCTACATTTTTGGTCTCCTTCTGCTTTACTCACGCACTCGACAACTCTCCGCATTTCAAACAAGAACTTGGGCTTTGAAAGCCCAAAGTTGGCCTACTTTACAGATGGATGGTACTGCGTGTCCCTAAGGAAGAAGACACCGCCCCCGTCCTCAATTCCCAGCCCCAATTGAAGCTTCATCCGTCTTTGTCGTCCCTTAACGCAAGATTTCCACGCCGCCATTCCTCTTCATCAGTCGCCCACTATTTGCTCACGACTCATTGGCATTCCAGATCGCTCAGACTACTGGTTGGTGATTTGTCTCAGATCCGGCTGCATCCGGTGGCCGCCCTTCGATCCTTGACTCCAACTTCGATATTGGGTTTTAGAACCTACCTTAATAAGAAAACACCAATGGCAGAACTTAGTCTGGGTATATTGATAGACATTCTAGATGAGGAATGGATGAGAGACACACTCCCTCATGATGATCTTTTACTCCCTCCCGTGCTGGTTGTTCGGGCTGATGACACTGAGGACTCAAATCAGGAGAGTCAGCCAGTTGATACTGATACTTGGCATGATCTTGCCCTAGGTAACCAATGAACCACCTTCTCCTAACTAAGGATGGTCTGTTTTCAAGAAACTTGCTTCAAGTTATAAATTTTATTATCATATTCTCTTGCTGTATTTGCATTGTAGAGTGTCATATTTCTATAAAATCCATGTTGTAGATTTAGGTAGAAAGTGTTTGTTTGTGGTAAAAGAAACTATGCAAGTGTTTGTTTGTGGTAAAAGAAACTATGTACATGTTGGTGGCTGTCAGTTAAGACTATTGACGGATTTGCTGTTCTCTTTTGTAATTTGTTGTGTGAAGACATTGAAATTTTATTTCTTATTATGAGATCTTTGTCCAATTCCATTTGTAAAAGACTTTAGAGTTGCTTCTAAACTTAATGGTTTTAAAGGAGTACTACCATCATTGTTTGGTACTTCAGTAAATAAAATTTTAATTATTCCTCTCCA

Coding sequence (CDS)

ATGGTACTGCGTGTCCCTAAGGAAGAAGACACCGCCCCCGTCCTCAATTCCCAGCCCCAATTGAAGCTTCATCCGTCTTTGTCGTCCCTTAACGCAAGATTTCCACGCCGCCATTCCTCTTCATCAGTCGCCCACTATTTGCTCACGACTCATTGGCATTCCAGATCGCTCAGACTACTGGTTGGTGATTTGTCTCAGATCCGGCTGCATCCGGTGGCCGCCCTTCGATCCTTGACTCCAACTTCGATATTGGGTTTTAGAACCTACCTTAATAAGAAAACACCAATGGCAGAACTTAGTCTGGGTATATTGATAGACATTCTAGATGAGGAATGGATGAGAGACACACTCCCTCATGATGATCTTTTACTCCCTCCCGTGCTGGTTGTTCGGGCTGATGACACTGAGGACTCAAATCAGGAGAGTCAGCCAGTTGATACTGATACTTGGCATGATCTTGCCCTAGGTAACCAATGA

Protein sequence

MVLRVPKEEDTAPVLNSQPQLKLHPSLSSLNARFPRRHSSSSVAHYLLTTHWHSRSLRLLVGDLSQIRLHPVAALRSLTPTSILGFRTYLNKKTPMAELSLGILIDILDEEWMRDTLPHDDLLLPPVLVVRADDTEDSNQESQPVDTDTWHDLALGNQ

Homology

[Close]

BLAST of Pay0006500.1 vs. ExPASy Swiss-Prot
Match: Q8L981 (Anaphase-promoting complex subunit 13 OS=Arabidopsis thaliana OX=3702 GN=APC13 PE=1 SV=1)

HSP 1 Score: 97.4 bits (241), Expect = 1.5e-19
Identity = 45/63 (71.43%), Postives = 53/63 (84.13%), Query Frame = 0


Query: 96  MAELSLGILIDILDEEWMRDTLPHDDLLLPPVLVVRADDTEDSNQESQPVDTDTWHDLAL 155
           MAE+SLG+LIDI+DEEWMRDTLP DDL LPPVL V+ DDTE++NQE+Q  D +TW DLAL
Sbjct: 1   MAEVSLGMLIDIVDEEWMRDTLPDDDLPLPPVLAVKTDDTEETNQETQQADAETWRDLAL 60

Query: 156 GNQ 159
             Q
Sbjct: 61  DTQ 63

[Close]

BLAST of Pay0006500.1 vs. ExPASy TrEMBL
Match: A0A1S3CA59 (Anaphase-promoting complex subunit 13 OS=Cucumis melo OX=3656 GN=LOC103498390 PE=3 SV=1)

HSP 1 Score: 315.1 bits (806), Expect = 1.7e-82
Identity = 158/158 (100.00%), Postives = 158/158 (100.00%), Query Frame = 0


Query: 1   MVLRVPKEEDTAPVLNSQPQLKLHPSLSSLNARFPRRHSSSSVAHYLLTTHWHSRSLRLL 60
           MVLRVPKEEDTAPVLNSQPQLKLHPSLSSLNARFPRRHSSSSVAHYLLTTHWHSRSLRLL
Sbjct: 1   MVLRVPKEEDTAPVLNSQPQLKLHPSLSSLNARFPRRHSSSSVAHYLLTTHWHSRSLRLL 60

Query: 61  VGDLSQIRLHPVAALRSLTPTSILGFRTYLNKKTPMAELSLGILIDILDEEWMRDTLPHD 120
           VGDLSQIRLHPVAALRSLTPTSILGFRTYLNKKTPMAELSLGILIDILDEEWMRDTLPHD
Sbjct: 61  VGDLSQIRLHPVAALRSLTPTSILGFRTYLNKKTPMAELSLGILIDILDEEWMRDTLPHD 120

Query: 121 DLLLPPVLVVRADDTEDSNQESQPVDTDTWHDLALGNQ 159
           DLLLPPVLVVRADDTEDSNQESQPVDTDTWHDLALGNQ
Sbjct: 121 DLLLPPVLVVRADDTEDSNQESQPVDTDTWHDLALGNQ 158

[Close]

BLAST of Pay0006500.1 vs. ExPASy TrEMBL
Match: A0A5D3CLL3 (Anaphase-promoting complex subunit 13 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold66G00110 PE=3 SV=1)

HSP 1 Score: 308.9 bits (790), Expect = 1.2e-80
Identity = 155/155 (100.00%), Postives = 155/155 (100.00%), Query Frame = 0


Query: 1   MVLRVPKEEDTAPVLNSQPQLKLHPSLSSLNARFPRRHSSSSVAHYLLTTHWHSRSLRLL 60
           MVLRVPKEEDTAPVLNSQPQLKLHPSLSSLNARFPRRHSSSSVAHYLLTTHWHSRSLRLL
Sbjct: 1   MVLRVPKEEDTAPVLNSQPQLKLHPSLSSLNARFPRRHSSSSVAHYLLTTHWHSRSLRLL 60

Query: 61  VGDLSQIRLHPVAALRSLTPTSILGFRTYLNKKTPMAELSLGILIDILDEEWMRDTLPHD 120
           VGDLSQIRLHPVAALRSLTPTSILGFRTYLNKKTPMAELSLGILIDILDEEWMRDTLPHD
Sbjct: 61  VGDLSQIRLHPVAALRSLTPTSILGFRTYLNKKTPMAELSLGILIDILDEEWMRDTLPHD 120

Query: 121 DLLLPPVLVVRADDTEDSNQESQPVDTDTWHDLAL 156
           DLLLPPVLVVRADDTEDSNQESQPVDTDTWHDLAL
Sbjct: 121 DLLLPPVLVVRADDTEDSNQESQPVDTDTWHDLAL 155

[Close]

BLAST of Pay0006500.1 vs. ExPASy TrEMBL
Match: A0A5A7TMF9 (Anaphase-promoting complex subunit 13 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold75G00500 PE=3 SV=1)

HSP 1 Score: 300.1 bits (767), Expect = 5.6e-78
Identity = 151/155 (97.42%), Postives = 151/155 (97.42%), Query Frame = 0


Query: 1   MVLRVPKEEDTAPVLNSQPQLKLHPSLSSLNARFPRRHSSSSVAHYLLTTHWHSRSLRLL 60
           MVLRVPKEEDTAPVLNSQPQLK HPSLSSL ARFPRRHSSSSVAHY LTTHWHSRSLR L
Sbjct: 1   MVLRVPKEEDTAPVLNSQPQLKFHPSLSSLTARFPRRHSSSSVAHYSLTTHWHSRSLRPL 60

Query: 61  VGDLSQIRLHPVAALRSLTPTSILGFRTYLNKKTPMAELSLGILIDILDEEWMRDTLPHD 120
           VGDLSQIRLHPVAALRSLTPTSILGFRTYLNKKTPMAELSLGILIDILDEEWMRDTLPHD
Sbjct: 61  VGDLSQIRLHPVAALRSLTPTSILGFRTYLNKKTPMAELSLGILIDILDEEWMRDTLPHD 120

Query: 121 DLLLPPVLVVRADDTEDSNQESQPVDTDTWHDLAL 156
           DLLLPPVLVVRADDTEDSNQESQPVDTDTWHDLAL
Sbjct: 121 DLLLPPVLVVRADDTEDSNQESQPVDTDTWHDLAL 155

[Close]

BLAST of Pay0006500.1 vs. ExPASy TrEMBL
Match: A0A0A0LNL0 (Anaphase-promoting complex subunit 13 OS=Cucumis sativus OX=3659 GN=Csa_2G437080 PE=3 SV=1)

HSP 1 Score: 260.8 bits (665), Expect = 3.8e-66
Identity = 132/152 (86.84%), Postives = 139/152 (91.45%), Query Frame = 0


Query: 7   KEEDTAPVLNSQPQLKLHPSLSSLNARFPRRHSSSSVAHYLLTTHWHSRSLRLLVGDLSQ 66
           +++  +PVLN  PQL LHPSLSSL+ARFPR HSSSSV HY LTTH HSRSLR LVGDLSQ
Sbjct: 70  RQKTPSPVLNFPPQLNLHPSLSSLHARFPRCHSSSSVTHYSLTTHRHSRSLRPLVGDLSQ 129

Query: 67  IRLHPVAALRSLTPTSILGFRTYLNKKTPMAELSLGILIDILDEEWMRDTLPHDDLLLPP 126
           IRLH V+ALRSLTPT ILGFR YLNKKTPMAELSLGILIDILDEEWMRDTLPHDDLLLPP
Sbjct: 130 IRLHSVSALRSLTPTLILGFRIYLNKKTPMAELSLGILIDILDEEWMRDTLPHDDLLLPP 189

Query: 127 VLVVRADDTEDSNQESQPVDTDTWHDLALGNQ 159
           VLVVRADDTEDSNQE+QPVDTDTWHDLALGNQ
Sbjct: 190 VLVVRADDTEDSNQETQPVDTDTWHDLALGNQ 221

[Close]

BLAST of Pay0006500.1 vs. ExPASy TrEMBL
Match: A0A6J1JH61 (Anaphase-promoting complex subunit 13 OS=Cucurbita maxima OX=3661 GN=LOC111484329 PE=3 SV=1)

HSP 1 Score: 126.7 bits (317), Expect = 8.5e-26
Identity = 60/63 (95.24%), Postives = 61/63 (96.83%), Query Frame = 0


Query: 96  MAELSLGILIDILDEEWMRDTLPHDDLLLPPVLVVRADDTEDSNQESQPVDTDTWHDLAL 155
           MAELSLGILIDILDEEWMRDTLPHDDLLLPPVLVVR DDTEDSNQE+QPVD DTWHDLAL
Sbjct: 1   MAELSLGILIDILDEEWMRDTLPHDDLLLPPVLVVRTDDTEDSNQEAQPVDADTWHDLAL 60

Query: 156 GNQ 159
           GNQ
Sbjct: 61  GNQ 63

[Close]

BLAST of Pay0006500.1 vs. NCBI nr
Match: XP_008459198.1 (PREDICTED: uncharacterized protein LOC103498390 [Cucumis melo])

HSP 1 Score: 315.1 bits (806), Expect = 3.5e-82
Identity = 158/158 (100.00%), Postives = 158/158 (100.00%), Query Frame = 0


Query: 1   MVLRVPKEEDTAPVLNSQPQLKLHPSLSSLNARFPRRHSSSSVAHYLLTTHWHSRSLRLL 60
           MVLRVPKEEDTAPVLNSQPQLKLHPSLSSLNARFPRRHSSSSVAHYLLTTHWHSRSLRLL
Sbjct: 1   MVLRVPKEEDTAPVLNSQPQLKLHPSLSSLNARFPRRHSSSSVAHYLLTTHWHSRSLRLL 60

Query: 61  VGDLSQIRLHPVAALRSLTPTSILGFRTYLNKKTPMAELSLGILIDILDEEWMRDTLPHD 120
           VGDLSQIRLHPVAALRSLTPTSILGFRTYLNKKTPMAELSLGILIDILDEEWMRDTLPHD
Sbjct: 61  VGDLSQIRLHPVAALRSLTPTSILGFRTYLNKKTPMAELSLGILIDILDEEWMRDTLPHD 120

Query: 121 DLLLPPVLVVRADDTEDSNQESQPVDTDTWHDLALGNQ 159
           DLLLPPVLVVRADDTEDSNQESQPVDTDTWHDLALGNQ
Sbjct: 121 DLLLPPVLVVRADDTEDSNQESQPVDTDTWHDLALGNQ 158

[Close]

BLAST of Pay0006500.1 vs. NCBI nr
Match: TYK11109.1 (anaphase-promoting complex subunit 13 isoform X2 [Cucumis melo var. makuwa])

HSP 1 Score: 308.9 bits (790), Expect = 2.5e-80
Identity = 155/155 (100.00%), Postives = 155/155 (100.00%), Query Frame = 0


Query: 1   MVLRVPKEEDTAPVLNSQPQLKLHPSLSSLNARFPRRHSSSSVAHYLLTTHWHSRSLRLL 60
           MVLRVPKEEDTAPVLNSQPQLKLHPSLSSLNARFPRRHSSSSVAHYLLTTHWHSRSLRLL
Sbjct: 1   MVLRVPKEEDTAPVLNSQPQLKLHPSLSSLNARFPRRHSSSSVAHYLLTTHWHSRSLRLL 60

Query: 61  VGDLSQIRLHPVAALRSLTPTSILGFRTYLNKKTPMAELSLGILIDILDEEWMRDTLPHD 120
           VGDLSQIRLHPVAALRSLTPTSILGFRTYLNKKTPMAELSLGILIDILDEEWMRDTLPHD
Sbjct: 61  VGDLSQIRLHPVAALRSLTPTSILGFRTYLNKKTPMAELSLGILIDILDEEWMRDTLPHD 120

Query: 121 DLLLPPVLVVRADDTEDSNQESQPVDTDTWHDLAL 156
           DLLLPPVLVVRADDTEDSNQESQPVDTDTWHDLAL
Sbjct: 121 DLLLPPVLVVRADDTEDSNQESQPVDTDTWHDLAL 155

[Close]

BLAST of Pay0006500.1 vs. NCBI nr
Match: KAA0042977.1 (anaphase-promoting complex subunit 13 isoform X2 [Cucumis melo var. makuwa])

HSP 1 Score: 300.1 bits (767), Expect = 1.2e-77
Identity = 151/155 (97.42%), Postives = 151/155 (97.42%), Query Frame = 0


Query: 1   MVLRVPKEEDTAPVLNSQPQLKLHPSLSSLNARFPRRHSSSSVAHYLLTTHWHSRSLRLL 60
           MVLRVPKEEDTAPVLNSQPQLK HPSLSSL ARFPRRHSSSSVAHY LTTHWHSRSLR L
Sbjct: 1   MVLRVPKEEDTAPVLNSQPQLKFHPSLSSLTARFPRRHSSSSVAHYSLTTHWHSRSLRPL 60

Query: 61  VGDLSQIRLHPVAALRSLTPTSILGFRTYLNKKTPMAELSLGILIDILDEEWMRDTLPHD 120
           VGDLSQIRLHPVAALRSLTPTSILGFRTYLNKKTPMAELSLGILIDILDEEWMRDTLPHD
Sbjct: 61  VGDLSQIRLHPVAALRSLTPTSILGFRTYLNKKTPMAELSLGILIDILDEEWMRDTLPHD 120

Query: 121 DLLLPPVLVVRADDTEDSNQESQPVDTDTWHDLAL 156
           DLLLPPVLVVRADDTEDSNQESQPVDTDTWHDLAL
Sbjct: 121 DLLLPPVLVVRADDTEDSNQESQPVDTDTWHDLAL 155

[Close]

BLAST of Pay0006500.1 vs. NCBI nr
Match: KGN63398.1 (hypothetical protein Csa_022587 [Cucumis sativus])

HSP 1 Score: 260.8 bits (665), Expect = 7.8e-66
Identity = 132/152 (86.84%), Postives = 139/152 (91.45%), Query Frame = 0


Query: 7   KEEDTAPVLNSQPQLKLHPSLSSLNARFPRRHSSSSVAHYLLTTHWHSRSLRLLVGDLSQ 66
           +++  +PVLN  PQL LHPSLSSL+ARFPR HSSSSV HY LTTH HSRSLR LVGDLSQ
Sbjct: 70  RQKTPSPVLNFPPQLNLHPSLSSLHARFPRCHSSSSVTHYSLTTHRHSRSLRPLVGDLSQ 129

Query: 67  IRLHPVAALRSLTPTSILGFRTYLNKKTPMAELSLGILIDILDEEWMRDTLPHDDLLLPP 126
           IRLH V+ALRSLTPT ILGFR YLNKKTPMAELSLGILIDILDEEWMRDTLPHDDLLLPP
Sbjct: 130 IRLHSVSALRSLTPTLILGFRIYLNKKTPMAELSLGILIDILDEEWMRDTLPHDDLLLPP 189

Query: 127 VLVVRADDTEDSNQESQPVDTDTWHDLALGNQ 159
           VLVVRADDTEDSNQE+QPVDTDTWHDLALGNQ
Sbjct: 190 VLVVRADDTEDSNQETQPVDTDTWHDLALGNQ 221

[Close]

BLAST of Pay0006500.1 vs. NCBI nr
Match: XP_004148091.1 (anaphase-promoting complex subunit 13 [Cucumis sativus])

HSP 1 Score: 130.2 bits (326), Expect = 1.6e-26
Identity = 62/63 (98.41%), Postives = 63/63 (100.00%), Query Frame = 0


Query: 96  MAELSLGILIDILDEEWMRDTLPHDDLLLPPVLVVRADDTEDSNQESQPVDTDTWHDLAL 155
           MAELSLGILIDILDEEWMRDTLPHDDLLLPPVLVVRADDTEDSNQE+QPVDTDTWHDLAL
Sbjct: 1   MAELSLGILIDILDEEWMRDTLPHDDLLLPPVLVVRADDTEDSNQETQPVDTDTWHDLAL 60

Query: 156 GNQ 159
           GNQ
Sbjct: 61  GNQ 63

[Close]

BLAST of Pay0006500.1 vs. TAIR 10
Match: AT1G73177.1 (bonsai )

HSP 1 Score: 97.4 bits (241), Expect = 1.1e-20
Identity = 45/63 (71.43%), Postives = 53/63 (84.13%), Query Frame = 0


Query: 96  MAELSLGILIDILDEEWMRDTLPHDDLLLPPVLVVRADDTEDSNQESQPVDTDTWHDLAL 155
           MAE+SLG+LIDI+DEEWMRDTLP DDL LPPVL V+ DDTE++NQE+Q  D +TW DLAL
Sbjct: 1   MAEVSLGMLIDIVDEEWMRDTLPDDDLPLPPVLAVKTDDTEETNQETQQADAETWRDLAL 60

Query: 156 GNQ 159
             Q
Sbjct: 61  DTQ 63

The following BLAST results are available for this feature:

BLAST of Pay0006500.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8L981	1.5e-19	71.43	Anaphase-promoting complex subunit 13 OS=Arabidopsis thaliana OX=3702 GN=APC13 P...	[more]

BLAST of Pay0006500.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3CA59	1.7e-82	100.00	Anaphase-promoting complex subunit 13 OS=Cucumis melo OX=3656 GN=LOC103498390 PE...	[more]
A0A5D3CLL3	1.2e-80	100.00	Anaphase-promoting complex subunit 13 OS=Cucumis melo var. makuwa OX=1194695 GN=...	[more]
A0A5A7TMF9	5.6e-78	97.42	Anaphase-promoting complex subunit 13 OS=Cucumis melo var. makuwa OX=1194695 GN=...	[more]
A0A0A0LNL0	3.8e-66	86.84	Anaphase-promoting complex subunit 13 OS=Cucumis sativus OX=3659 GN=Csa_2G437080...	[more]
A0A6J1JH61	8.5e-26	95.24	Anaphase-promoting complex subunit 13 OS=Cucurbita maxima OX=3661 GN=LOC11148432...	[more]

BLAST of Pay0006500.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008459198.1	3.5e-82	100.00	PREDICTED: uncharacterized protein LOC103498390 [Cucumis melo]	[more]
TYK11109.1	2.5e-80	100.00	anaphase-promoting complex subunit 13 isoform X2 [Cucumis melo var. makuwa]	[more]
KAA0042977.1	1.2e-77	97.42	anaphase-promoting complex subunit 13 isoform X2 [Cucumis melo var. makuwa]	[more]
KGN63398.1	7.8e-66	86.84	hypothetical protein Csa_022587 [Cucumis sativus]	[more]
XP_004148091.1	1.6e-26	98.41	anaphase-promoting complex subunit 13 [Cucumis sativus]	[more]

BLAST of Pay0006500.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G73177.1	1.1e-20	71.43	bonsai	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Payzawat) v1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR008401	Apc13	PANTHER	PTHR28672	ANAPHASE-PROMOTING COMPLEX SUBUNIT 13	coord: 11..158

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Pay0006500	Pay0006500	gene

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Pay0006500.1-five_prime_utr	Pay0006500.1-five_prime_utr-chr11:5792107..5792310	five_prime_UTR

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Pay0006500.1-exon	Pay0006500.1-exon-chr11:5792107..5792556	exon
Pay0006500.1-exon	Pay0006500.1-exon-chr11:5792940..5793054	exon
Pay0006500.1-exon	Pay0006500.1-exon-chr11:5793147..5793200	exon
Pay0006500.1-exon	Pay0006500.1-exon-chr11:5794423..5794904	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Pay0006500.1-cds	Pay0006500.1-cds-chr11:5792311..5792556	CDS
Pay0006500.1-cds	Pay0006500.1-cds-chr11:5792940..5793054	CDS
Pay0006500.1-cds	Pay0006500.1-cds-chr11:5793147..5793200	CDS
Pay0006500.1-cds	Pay0006500.1-cds-chr11:5794423..5794484	CDS

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Pay0006500.1-three_prime_utr	Pay0006500.1-three_prime_utr-chr11:5794485..5794904	three_prime_UTR

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Pay0006500.1	Pay0006500.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0051301	cell division
biological_process	GO:0007049	cell cycle
biological_process	GO:0070979	protein K11-linked ubiquitination
cellular_component	GO:0005680	anaphase-promoting complex
molecular_function	GO:0004386	helicase activity