Pay0005850.1 (mRNA) Melon (Payzawat) v1

Overview


Name	Pay0005850.1
Type	mRNA
Organism	Cucumis melo L. var. inodorus cv. Payzawat (Melon (Payzawat) v1)
Description	DEAD-box ATP-dependent RNA helicase 39-like
Location	chr03: 20862765 .. 20872298 (-)
Sequence length	2298
RNA-Seq Expression	Pay0005850.1
Synteny	Pay0005850.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AAATTATGTCCTCAGCTTTGTTGCTACAACAACAAAGCCCACGAAATAAAATTGAAAAACTCTGTAGATATTTTTCTTAATTTATATTTATGATTTGGAAATTTCAAACGTAACATACAAATTGAGTTCGAGTGTGGGGCAGGGCTAACTTCCGAACTCCGAACAGCACCGCCATGGGAAGCAGAAGAAAAGCTCTTCTCGAGCTCTCTCACTGCGCAAACATCCTTTTATCTCCAACGAAGCGCTCTATTTTCCCCAATTTCACACTCTCCACAAACGCACTTTTAGCTTCTCCATTTTGTTCCTCTACCTTTTCCAGATCCTCCGCCGATGGCACCCCCGTGGAAAATGATCAGCCGCCGCAATCGAACAGAGATTCGACGCTTCTTGAAAAGTTCAGGCTCAGAAAACTCAAAGGCTTGTCGAAAATCTCGCAACATTCGTCGAGTTCTAACGGAGGCGAGAAGGTGATGACAGGTTTCAGGCAGTTGGGGCTTTGCAATGAATTGGCCGGGGCTGTAGAAGAAATGGGAATTTTGGCGCCTTCTGAGTTGGATTGTGCAGCGATTCCAGCTGTCTTGGAAGGAAAGAATGTGGTGTTGGGATATCTTAATGGACCCGAAAGGGCTTTGGCTTACTTGTTGCCTCTCATACAGGTTCTTTTTTTTTTCCTTCATTTGAATACATTCAATCCTTTGGCACTTTCTTTAGCAGAATCAATGATGGCTTTGAGTTCATAGTATCAATCAGAAGTGTACTTAGCGTAGTTATACGAATATTTCTGGATTAGAATTACCCATAAGTTGATCTTTGTAGGAATTTTGATTGGGACTGTTAAACGGTAGAAACAAGAACACAACCCTAAAACAGGGAGAAAAAACAGAAATAAACTTAGTTAAAGTAAGATACTAAAATGCTCTCAGGACTATAAACCATCAACAAAGTGTTGGAAATGACTTGTGTGCATAAGCCCATAAGCAAAGTGTTGGAAATGATTTCTCCAAAAAATGTTTGTCCCATGTTGGAGAATTTTGAAATGCCAAGAGGGTATAAGTACCAAGGCATGCTAGGTATGTGACTAAAATGTGTGGGCGGTGATAGCATAACCCTATCACCACACGCACGCTGTCGCCATCTGTCCGCCCGAGTAGCTGTGCTTGCGCGAAAAGGAAATAATTTTTATTACCAATACGTTTAATTTTATAACTCCTATCTGGCAATTAATTTTGTAGCTATTATTTCTAACCGTTGGAAAACCCTAGCCGGCGGTTTTTCTTTTCTTCTTTTCTTCCTCTTTATCTATCATCTTCTTCATTCCAGATCTGGGCATTCAAAACCAAATCTCTCTATTTGTGTTTGTTCTATTCCGTTTTGAGCTTGTTCTTCATCTTGATTCTATTCCTTATTCTGATGAGTGCACGCCGAAATAGGAAAGCTGTGTTAACCTTGGGGTACAACTGACATCTCGATTGGCACCACGGTCACACCGTAATTGTTTTCAAGGCAGTGTTTTGTCACAACACAATAATTCTTTTTGACATCCTATTTACAACAATCTGGAAGCAATTACCGATGTCAATCAAGAATACCAAGGTCTTTCCTGATTTGTCCAAACTTTAACTGCTTGATGGAGCAAACTCCCATCGCTGGTCTAAAAAATTGCTGATTTTTTTTTAGCAGCTAGAGGTCGATTATGTGCTTAGCTTAGAGTTGTCATCTGATACTGAAAAGGCAGCAACTAATCCATAATCATCTAAGGGACCTCCTAATGCTTCTGATCAATTGAAGCCGACTCCTACGATTGATCTTGAGAAATATGAGAAGGACAATAAGGCAGTTCGTAGCCACTTGCTAAATCACATGATAGATGCGATGCTCGATTTGTTCTTGGTCGAAATATCCGCCAAGGTAATTTGGAGTACGTTGGAATTACGGTATGGTGGAGATAAGCAGGCCGCAAGAAATATGTTGTTGGAAAATGGCTACTTTTTTAGATGATAGACGACAAATCTTTGGTGGAACAAATTTCATGTGTATGAAAATTTGGTGGCAAATGTCTTAAGGAATGACGATGTGTGAGATACTCTAAGCAAACGTTCTGTTCGAGAAGTTTTTCCCATCGTGGAACGACTACCAAAATCATCTGAAACATAAAAAGGACTTGAAAATCCAGGAGCTAATAAGCCATATGCGCATGGAAGAAGCCAATAGGCTGAAAAAGATAAGCTAGTTTCTGAAAATTCAAATTCAGTTAATGTTAACTTAGTTGAATCTTTTACTATTAACAAAGACAAGTTAAAAAATTACAAGAATCTAGGAAAAATAGTTCCTCTCAAAAGAAGGGACACTGCAAAGTTGTCGATGGAAAAGTTGAAAAGAAGAAGCTGAGTTGCTATGACTATGGAAAAGGAGGACACAAATCCTATCAATGCCTTCAAAGGAAAGGAAGGCCTAACTAGTGACCCATACCTCAAGTCAATCTTGTTGAACAAGATGATGTAATAGCTACAGCTGTGGAAGTCAACCTGGTGGAAAATAAAACTGACTGGATTCTTGATATTGAAGCTTCGAGACACTTATGCACAAATTGAAAGCTTCTCCATGATTATGAGAACACAGAGGATGTAGAATGTTCGTTCATGGGAAATTCAACCACTGCAAGAGCACTTGGGAAAGGGAAGATTCTTTTGAAATTGACTTCCGGAAAAATTTTATCCTTAAGTAATGTATTGTATGTACCTTCCTTACGTAGGAATCTGGTGTCTGGGAGTCTGTTGAATCGGGCTGGTCTTAAGATTGTACTAGAAGGTGACAAGGTTATCCTCACAAAAAACGGAGACTTTGTTGGTAAGGGGTATATGTCTGATGGTCTCTTTGTACTGAATACTATTATGTTGAATGCAAGTACTTCTAGTTCTGCTTACGTAGTTGAATCTACTGATATGTGGCATCATAGACTAGGTCATGTGAATCATCATTGATTAGGAAGCTTAAGGAATTAAGAATAATTAATGCATATGAAACGCATGAATCTAGTAAATGTCCTGTTTGTGTAGAAACTAAATTTATCAAGAAACCGTTCAAATCTGTCCACATAATAACTAGAATTAATTCATTCTGATCTAGCTTATTTAGAAAACACTTCAAGTAGAGGTGGGAAAAATTATTATATATCTTTTGTTAATGATTCTAGATTCACTAAGATTTATCTCATAAAAACAAAATATGAAGCTGACAATATGTTTTTGAAATTTAAAGCAGAAGTAGAGAATCAATTAGATAAGAAGATAAAAAGGTTAAGGTCAGATAAAGGTGGTGAATACGGTGACGATTATCTTAAAGAATTTTGTGAATCAAATGCATTATTCACGAATTTATTGCCCCTTATTCACCACAACAGAATGGTATACCTAAGCGGAAAAATAGAACTCTTATGGAAATGACGAACGCTATGTTGCTAAGTTCTGGATTATCTGATAATATGTGGGGAGAAGCAGTGCTTTCTTCACGTTTTATTCTCAACAAGGTACCTCACAAAAAACTAGATAAAACTCCTTACAAACTTTGGAAAGGCTACGATAATCTCACTTACTTGAAGGTTTGGGGATGCTTGACTAAGGTACCATATCTTGCATTCAAGAAACAATCTAAAACCTTTGATTGTGTGTTTATGGCTATGCTCAAAATAGTGCTACATACAGATTCATGTGATTGAATGATAAATCCATATGTGAATATGGGGATGCAGAATTTTTTGAGCATGTTTTTCCATTGAAAAGGGAAATTAAATATATGTCTGTTTCTATCCCTTCATCTAATAGCATGCATGAAACTGGGGATAACATAGCTTCTGGAAAAATTTATGAATTTGAGATTGTTAATTATCCTGGTGTAATGCTTGAAGTAGAACCTAGGAGTAATGGCAGAGAACTAAGAAAGAGTTTGGTCCTGATTTTTTAACCACCTTTGTAGTTGAAAGACAAGATAATATCGACTGCCATTTTGCATGTATGTATCTAATAGATGAAGATCCTAAAACTTACCAAGAGGCTTTAAACTTTGTAGACTCTATCATGTGGAAAGAAGCCATTAAGAGTGAACTAGATTCTCTAATCGTGAATCAAACATGGGAATTGTATGTTGATGATATGCTGATCTTCGGAACAAACATAGAGTCGATAAACAATACCAAATTATTTTTGTCGCAACATTTTGTAATGAAAGACTTAGGGGAAGCTAATGTAATACTTGGTGTTAAATAAAGGGAAACGGAAAATGGTTTCTCTGTGTTAATCACATTACATCGAAAAACTATTAAAGAAAGTTTGATTGCTTTGATGACCCTTTAGTGAGAACTCCGTATGAGGCTAGTATAAATCTTAAGAAGAATAAAGGAGATAGTGTGTTTCAATCCAAGTATGCAAAGATCATAGGTAGTGTTATGTATTTGATGAATTACATTAGACTTGATATTGCATATGTTGTCAATAGATTATGTTGATGCACACATAATCCTGATAAAGCTCATTGAGATGCTCTTCATCGTCAATTGAAATATCTTAAAGGCTGGATAAACTACGGTTTGCACTATAAATTTTTTTTTTGTTGTTGTATTAGAAGGTTATTGTGATGCAAACTGGGTTACGGATAATGACGAGATCAACTCAACTAGTGGTTATATGTTTTTACTTAGAGGTAGAGCAATATCATGGAAGTTTGCAAAATAGACTTGCATAGCTGGATCCATTATGGAATCTGAATTTATTGCTTTGGAATTGGTAGAAGAAGAGGCTGAGTGGATTAAAAGCCTTATGGGAGATGTACTTTTGTGGGGGACATCTGTACCGGTCTCGATACACTGTGATTTACAGGCTACCATAGGTATTGTCAAGAATAGTGTTTATTATTGAAAGCAATAAAAATATGAAACACCTATGTAATGGAAACCCAAGTACCAAGAGAAAACCCACGATATTTTTGTTCTTATTATCTTATGATAAAATACAATAGGTCAAGAGGGGGAATAAATAGAATAGTACAAATAGATAAATCAGGAAAATATATTTAAGGCAAGTCTTCCAATGGAGCCCACTAGCTCTTGCTGCGAATAGAGTTTATAATGACAAAAGAAGACATATACGTCTTAGACATGGAGCTGTGAAACAATTGTTAAAGGAAGGAACTATTTCCTTAGAATATACTAGGTTTGAGAACTTGGTTGATTTTTTATCCAAAGGACCAACTAGAAAAATAGTTCTAGACTCCTTAGTGAACTATGGGGTTGAAACCCTATAGTGATCCATAGCATTTGATTTGGGTGGTCTATTGCGATGGACTTGATGGTCCATAGTCCATTGTGTGGGTAGTCCTTAGATGGACGATACTAAATCCTTTTGAATGTTCCATAATCTTTAATTGACGATGATGAAGTCTTTATAGCTTATTTTGAGTGGTTTATTTTAACAAACTTGATGAAGCATATAACGTGATAATGAAGGTGTGACCGCCTTTTATGAAAGAGCACGATGACCCTAGGTTTATGTGCATGGTCATATTAAGATCAGATTTATATTGCAAAATCAAGAAAAGAACAAGGAGTGAATTGTGTTGGGAAGGTCTCAACCAATGTTATTGAAAGTTTAAGAGGTAACTCACTCTCTCTAACAAGGTTCTTGCCTTGCTTCACTATGCATCAATTCAAATCATTAGATATTGTTGCTTAAGCATAATATCCTATCTTAACTTAGAACAAAATTTGTATAACTTGTTTCATCTGTCATAATAGTCATTTGTGGGAGATGGTTGGAAATGACTTGTGGGCTTAGGCCCATAAGCAAAGAACAATGTTTTATCTCACATCGGAGAATTTTGAAATGCCAACGGGGTATAGATATCAAGGCATGCTAGGTGTGAGACTAAAATGTGTTGGTGGTGATAGCATAATCCTGATACCATAGGCGCACTACCGCTGTCCGTTCATTTGTCCGATTAGGTTAGGTCAGGTCGGGTAATTGTGGTTGCGCAAAAAGGAAATAAATTCTATTACTATACATTTAATTTTATAACTCCCATTTGACAAATAGTTTTGTAATTATTATTTCTACCCATTGGAAAACCCCATCCGGCAGTTGTTCTTTTCTTCTTTTCTTCCTCTTTATCTATCACCTTCCTCATTCCAAATCTGGGCATTCAAAGCCAGATCTCTCTCGGTTTGTGTTCATTTTATTCCGTTCTGAGCTTGTTCTTCATCTTGATTCTATTCCTTATTCAAGCGAGTGCACGTTGTAATAGGGGAGCTGTGTTAACCTTGGGAGCAATTGGCATCTTGATTGGCACCACGGTTGTGCTGTAATTGCTTTTAGAGTAGTGGTCGTCATGACACAACAATTCCTTTCGATATCTTATTTACAATACAACGCCCCTTATTTCCGACAATGACAATTTGTCAAATCAATTTCCTAATAGGTAGCCTCAAAGTGGTAGGTTATGTAATCTTTTAGTTTTAATATTGGTTAAATTATATATTTAGTCCTTGGATTTGAGGTTTGTATATATTTGGTTTCTCAAATTTTAAAATTAGAAATTCAGTTCCTTAAACTTTCAAAACTACAAATACTAGACACATGATTTAAGGTATAGAATTCAAATTTGTTGGACTCTAATTAGACACAAATTTTATAGTCCAGGGACCTTTTACATACTTTTGGAAGTTCTTTCTCTTCTAGTACAAGTGATTGTAGGACCGAAGAATCGAGCCTCTCACTTCTAGAATGGAAGGTCAAGTCAATTACGGTTGAGCTAAGCTCATTTTTGTTACATACTTTTAAAAGTTGAAGGACCAAAGCATGTGCGCTTGAATTACGTGTGATTGAACATTAATTTGACTAATGAGACTCCATGTGTGGAATATTAATATGAAACATGGTAGAAAATTAGAAATTGCATTGGGAAGTTTGAACTTTTTGTACATTTAGCCATGGGTGGGGAATCGTAATTCTTAACTATATAATGCTTTGAACACTTGATTTATCCTTAGATTGGTAGGAAATTTGAAGTTAGCACCTAATGCCATGTTAAATTTACATTAAACCCTTTTGCTTTTAGGTTAATAAGCCCCTAGGATAAATGTAATCTTTTAGTATGCTCGTTATTTTCATTCCTGTTCTTGAATTGTAAAATTTTTATCATGGCTTTGCAGTCGCCTCCCATGCTTCTTAATTGATCTACTCTTGGAGTAATTTGAATTTTGATTTTCCATCTAAATTTGAAGAATGTACAATACCAAAAGTCTAAAATGCTGTCTTCTCTGTCATGATTTATGTTTTCGCTGTTGTGTGTCTATCATCTGCTCTTATTAGAATCTAAAAAGGGATGAAAAAAGGTATGGAACAAGGTCCAAGCATCCTCGAGCTTTTGTTATGTGCCCAACTGCGCAGCTATCTGAAGAGGTATTATCTATCACTTTCTCAGACCTTCATGAATAAGATGTTAAGATCAACTACAATTTAGCTGACACAGGATGCACCCTGCAGTTGTTTTGTATGGCCAAATACATCAGCAATTACAGGCAGCTCAAAACTCCAAGGGATAATAGTTGTGGTGAATTAGAGCTTCAGAAAAGTGCATCCGATGTCTCAATTGGTTTGTTAATTGGCACCCCTGATGAAATCTCCGAACTCATTGAGGAGGGTAGTGTGGTTCTTGATGAAATCAATTACTTGGTGTGTGGTGAAATATTCATACGGCATCCTCTTTAAAGATGTTTTTATTTACCTTTTTTCTTACACGGTATTTGGTAATTTGGTATGATATAATATAGTTTTTAATTGTTTTTATTATTATTTTTTAAAGAAAATCTGTTCCTTGCTCTGAGATAGCGTATTTTTTAGTTTTTCTTCCAATTATAGCCTACATCAAGTCAAAAACTGTTTGATGGATTGACCCTTGTCATTTTTAAATCCCTACCATGTTTATCTTTAAGACGAAATTATTTGTGCATCTGAGTTTTTAATCTTACGAAACCATCAGTATTGGCATTATATATAATGTTTTTATAATTTTCCTTGTGAAACAGGTATTTGATGAGTTGGATTCAATGTTCGATCTTGGTTTTGGCCCCAACATTAAAAAGATTTTAACTTCAGTAAGACACTGCAATGAAAAGTGTCGATCCATTGTCGTTACTTCGACCTTGATAAAGGTTATTTGGTCTACTCTGTCTCTTATTTGACATAGTTCTTTTGTGCGATAGGTTCTTAACTTTTTCTTGAGTTAACAAATTGTGTTGTAAATTGTAGATGATGCATGAACAACGTTCATCCCTTGTCAAGTCTCTGAGGTGTGGTGATGCGGGAGAGATTGCTGCTATGGTCCTAGAAATTGAGGAAGAAGAGGCATTCCATCTTATGGAATCTCCAGATGCTCTGAAATCTAAACTTGCTGATGTGGTCGAGTCACTTCGTCCATCTACACAGGAAACTTAAAATTTGATAAATACTTGTTTTGGACGATTGAAAATAACTTTTTAAAGTCGTCATATCTACGTTTACAATCATCAGCCGGTTCTTTCTTAAGATTATGTCAAATGAACAGTTTTTGTGTTTTGGTGATACAATTATCATTTTCATTTCAAGACTGCATACAATCCAGGGGTTTGAAAGATACAAATCTGCATACAGTGATAAGCTCTTGGAGATGACAGGAAAACAAATGAAAAAGATAAATTTCGAGCTGCATATTTTATCCTTGGCTTTTCGCCTTGTGATTTTGAATAGGCCTCTTCACTTCCAGGTGAGTAAAGGACGTGGAGTTTTGGCAGGGGTTACAACATTTCCATTGGGGTCGTATAATATGACTCCTGAGAAGTCCGGTAGCTGGCATTTCCCACCCATGAGAATGTTCTTGTGCCATATAGAAGCTTGTTGCTCTCTACTGAAGAACATCTCATTGTTGTCATTCTCTGGCTCGGTGGCATTCACTTGTCCCGTTGTCACAACCGTTGCTTCTTGGTTCAACTCTATGACAGGATCCTCAAACTCGTATCCATAATCCAAGCAAGCATTCCAACGGCGGCGCCATTTTCGGGCATGGGAAGCACACATGAACAATGCAAAAGCACAGAGGAGAAGGCTCACACCAGCCATGCCAACCTGGGTTGTGCCTTGTGAAGAATGTATGATTTGCAGTTGCCTTGCCATCTTGGGGTAATTTCTAAGCTTGTTTTTTCTGAAGCAATTAGAAAGTTTGTTTTTGTCTGAAGACTTGTTATGAAGGGAGCATTAATTTATACAAGTTTTGAAGTGGAGCTGTTGGTCTTTGAGGTTTTGTTGACCTGATTTGTGGTTTTGGTGATCACTTTCCACTCGTAAGATTGTGATTTAAGTTTGCGTTCTTTGAGAATGAGAACTTTTAATGAAGGGTTCCTAACTTTTGGGTTATTTTATGAACTCAACTCCTACAAATTTATTAATAGTTGACTGTAATTAAATATTGTTTTTATTGTATATATATTTGATTTTGTGTCATTGTTTCCAT

mRNA sequence

AAATTATGTCCTCAGCTTTGTTGCTACAACAACAAAGCCCACGAAATAAAATTGAAAAACTCTGTAGATATTTTTCTTAATTTATATTTATGATTTGGAAATTTCAAACGTAACATACAAATTGAGTTCGAGTGTGGGGCAGGGCTAACTTCCGAACTCCGAACAGCACCGCCATGGGAAGCAGAAGAAAAGCTCTTCTCGAGCTCTCTCACTGCGCAAACATCCTTTTATCTCCAACGAAGCGCTCTATTTTCCCCAATTTCACACTCTCCACAAACGCACTTTTAGCTTCTCCATTTTGTTCCTCTACCTTTTCCAGATCCTCCGCCGATGGCACCCCCGTGGAAAATGATCAGCCGCCGCAATCGAACAGAGATTCGACGCTTCTTGAAAAGTTCAGGCTCAGAAAACTCAAAGGCTTGTCGAAAATCTCGCAACATTCGTCGAGTTCTAACGGAGGCGAGAAGGTGATGACAGGTTTCAGGCAGTTGGGGCTTTGCAATGAATTGGCCGGGGCTGTAGAAGAAATGGGAATTTTGGCGCCTTCTGAGTTGGATTGTGCAGCGATTCCAGCTGTCTTGGAAGGAAAGAATGTGGTGTTGGGATATCTTAATGGACCCGAAAGGGCTTTGGCTTACTTGTTGCCTCTCATACAGAATCTAAAAAGGGATGAAAAAAGGTATGGAACAAGGTCCAAGCATCCTCGAGCTTTTGTTATGTGCCCAACTGCGCAGCTATCTGAAGAGTTGTTTTGTATGGCCAAATACATCAGCAATTACAGGCAGCTCAAAACTCCAAGGGATAATAGTTGTGGTGAATTAGAGCTTCAGAAAAGTGCATCCGATGTCTCAATTGGTTTGTTAATTGGCACCCCTGATGAAATCTCCGAACTCATTGAGGAGGGTAGTGTGGTTCTTGATGAAATCAATTACTTGGTATTTGATGAGTTGGATTCAATGTTCGATCTTGGTTTTGGCCCCAACATTAAAAAGATTTTAACTTCAGTAAGACACTGCAATGAAAAGTGTCGATCCATTGTCGTTACTTCGACCTTGATAAAGATGATGCATGAACAACGTTCATCCCTTGTCAAGTCTCTGAGGTGTGGTGATGCGGGAGAGATTGCTGCTATGGTCCTAGAAATTGAGGAAGAAGAGGCATTCCATCTTATGGAATCTCCAGATGCTCTGAAATCTAAACTTGCTGATGTGGTCGAGTCACTTCGTCCATCTACACAGGAAACTTAAAATTTGATAAATACTTGTTTTGGACGATTGAAAATAACTTTTTAAAGTCGTCATATCTACGTTTACAATCATCAGCCGGTTCTTTCTTAAGATTATGTCAAATGAACAGTTTTTGTGTTTTGGTGATACAATTATCATTTTCATTTCAAGACTGCATACAATCCAGGGGTTTGAAAGATACAAATCTGCATACAGTGATAAGCTCTTGGAGATGACAGGAAAACAAATGAAAAAGATAAATTTCGAGCTGCATATTTTATCCTTGGCTTTTCGCCTTGTGATTTTGAATAGGCCTCTTCACTTCCAGGTGAGTAAAGGACGTGGAGTTTTGGCAGGGGTTACAACATTTCCATTGGGGTCGTATAATATGACTCCTGAGAAGTCCGGTAGCTGGCATTTCCCACCCATGAGAATGTTCTTGTGCCATATAGAAGCTTGTTGCTCTCTACTGAAGAACATCTCATTGTTGTCATTCTCTGGCTCGGTGGCATTCACTTGTCCCGTTGTCACAACCGTTGCTTCTTGGTTCAACTCTATGACAGGATCCTCAAACTCGTATCCATAATCCAAGCAAGCATTCCAACGGCGGCGCCATTTTCGGGCATGGGAAGCACACATGAACAATGCAAAAGCACAGAGGAGAAGGCTCACACCAGCCATGCCAACCTGGGTTGTGCCTTGTGAAGAATGTATGATTTGCAGTTGCCTTGCCATCTTGGGGTAATTTCTAAGCTTGTTTTTTCTGAAGCAATTAGAAAGTTTGTTTTTGTCTGAAGACTTGTTATGAAGGGAGCATTAATTTATACAAGTTTTGAAGTGGAGCTGTTGGTCTTTGAGGTTTTGTTGACCTGATTTGTGGTTTTGGTGATCACTTTCCACTCGTAAGATTGTGATTTAAGTTTGCGTTCTTTGAGAATGAGAACTTTTAATGAAGGGTTCCTAACTTTTGGGTTATTTTATGAACTCAACTCCTACAAATTTATTAATAGTTGACTGTAATTAAATATTGTTTTTATTGTATATATATTTGATTTTGTGTCATTGTTTCCAT

Coding sequence (CDS)

ATGGGAAGCAGAAGAAAAGCTCTTCTCGAGCTCTCTCACTGCGCAAACATCCTTTTATCTCCAACGAAGCGCTCTATTTTCCCCAATTTCACACTCTCCACAAACGCACTTTTAGCTTCTCCATTTTGTTCCTCTACCTTTTCCAGATCCTCCGCCGATGGCACCCCCGTGGAAAATGATCAGCCGCCGCAATCGAACAGAGATTCGACGCTTCTTGAAAAGTTCAGGCTCAGAAAACTCAAAGGCTTGTCGAAAATCTCGCAACATTCGTCGAGTTCTAACGGAGGCGAGAAGGTGATGACAGGTTTCAGGCAGTTGGGGCTTTGCAATGAATTGGCCGGGGCTGTAGAAGAAATGGGAATTTTGGCGCCTTCTGAGTTGGATTGTGCAGCGATTCCAGCTGTCTTGGAAGGAAAGAATGTGGTGTTGGGATATCTTAATGGACCCGAAAGGGCTTTGGCTTACTTGTTGCCTCTCATACAGAATCTAAAAAGGGATGAAAAAAGGTATGGAACAAGGTCCAAGCATCCTCGAGCTTTTGTTATGTGCCCAACTGCGCAGCTATCTGAAGAGTTGTTTTGTATGGCCAAATACATCAGCAATTACAGGCAGCTCAAAACTCCAAGGGATAATAGTTGTGGTGAATTAGAGCTTCAGAAAAGTGCATCCGATGTCTCAATTGGTTTGTTAATTGGCACCCCTGATGAAATCTCCGAACTCATTGAGGAGGGTAGTGTGGTTCTTGATGAAATCAATTACTTGGTATTTGATGAGTTGGATTCAATGTTCGATCTTGGTTTTGGCCCCAACATTAAAAAGATTTTAACTTCAGTAAGACACTGCAATGAAAAGTGTCGATCCATTGTCGTTACTTCGACCTTGATAAAGATGATGCATGAACAACGTTCATCCCTTGTCAAGTCTCTGAGGTGTGGTGATGCGGGAGAGATTGCTGCTATGGTCCTAGAAATTGAGGAAGAAGAGGCATTCCATCTTATGGAATCTCCAGATGCTCTGAAATCTAAACTTGCTGATGTGGTCGAGTCACTTCGTCCATCTACACAGGAAACTTAA

Protein sequence

MGSRRKALLELSHCANILLSPTKRSIFPNFTLSTNALLASPFCSSTFSRSSADGTPVENDQPPQSNRDSTLLEKFRLRKLKGLSKISQHSSSSNGGEKVMTGFRQLGLCNELAGAVEEMGILAPSELDCAAIPAVLEGKNVVLGYLNGPERALAYLLPLIQNLKRDEKRYGTRSKHPRAFVMCPTAQLSEELFCMAKYISNYRQLKTPRDNSCGELELQKSASDVSIGLLIGTPDEISELIEEGSVVLDEINYLVFDELDSMFDLGFGPNIKKILTSVRHCNEKCRSIVVTSTLIKMMHEQRSSLVKSLRCGDAGEIAAMVLEIEEEEAFHLMESPDALKSKLADVVESLRPSTQET

Homology

[Close]

BLAST of Pay0005850.1 vs. ExPASy Swiss-Prot
Match: Q56X76 (DEAD-box ATP-dependent RNA helicase 39 OS=Arabidopsis thaliana OX=3702 GN=RH39 PE=2 SV=2)

HSP 1 Score: 167.2 bits (422), Expect = 3.5e-40
Identity = 97/272 (35.66%), Postives = 162/272 (59.56%), Query Frame = 0


Query: 41  PFCSSTFSRSSADGTPVENDQPPQSNRDSTLLEKFRLRKLKGLSK-----------ISQH 100
           P  S+  + SS   T   N   P   + + LLE+ RLR LK  +K           + + 
Sbjct: 43  PLYSAAATTSSP--TTETNVTDPDQLKHTILLERLRLRHLKESAKPPQQRPSSVVGVEEE 102

Query: 101 SSSSNGGEKVMTGFRQLGLCNELAGAVEEMGILAPSELDCAAIPAVLEGKNVVLGYLNGP 160
           SS     +K++  F++LGL  E+ GA++E+ I  P+E+ C  IPAV+E K+VVLG   G 
Sbjct: 103 SSIRKKSKKLVENFQELGLSEEVMGALQELNIEVPTEIQCIGIPAVMERKSVVLGSHTGS 162

Query: 161 ERALAYLLPLIQNLKRDEKRYG--TRSKHPRAFVMCPTAQLSEELFCMAKYISNYRQLKT 220
            + LAYLLP++Q ++ DE   G  T+ + PR  V+CPT +LSE+++ +AK IS++ + ++
Sbjct: 163 GKTLAYLLPIVQLMREDEANLGKKTKPRRPRTVVLCPTRELSEQVYRVAKSISHHARFRS 222

Query: 221 PRDNSCGELELQKSASDVSIGLLIGTPDEISELIEEGSVVLDEINYLVFDELDSMFDLGF 280
              +    +  Q+ + + +I +++GTP  I + IEEG++V  +I YLV DE D+MFD GF
Sbjct: 223 ILVSGGSRIRPQEDSLNNAIDMVVGTPGRILQHIEEGNMVYGDIAYLVLDEADTMFDRGF 282

Query: 281 GPNIKKILT-----SVRHCNEKCRSIVVTSTL 295
           GP I+K L      +++  ++  ++++VT+T+
Sbjct: 283 GPEIRKFLAPLNQRALKTNDQGFQTVLVTATM 312

[Close]

BLAST of Pay0005850.1 vs. ExPASy Swiss-Prot
Match: Q5VRY0 (DEAD-box ATP-dependent RNA helicase 39 OS=Oryza sativa subsp. japonica OX=39947 GN=Os01g0184500 PE=2 SV=1)

HSP 1 Score: 166.8 bits (421), Expect = 4.5e-40
Identity = 101/290 (34.83%), Postives = 168/290 (57.93%), Query Frame = 0


Query: 36  ALLASPFCSSTFSRSSADGTPVENDQPPQS--NRDSTLLEKFRLRKLKGL----SKISQH 95
           A LA+   ++T + +SA   P E +   +   +R   LLE+ R R LKG+     + +Q 
Sbjct: 27  AALATTTTTTTAAGASAVTAPTEPETTAREAPSRHELLLERLRQRHLKGVPAATPRPAQR 86

Query: 96  SSSSNGG------------EKVMTGFRQLGLCNELAGAVEEMGILAPSELDCAAIPAVLE 155
                GG             +V+  F +LGL  E+  A+ EMGI  P+E+ C  +PAVL 
Sbjct: 87  EKGRGGGGGGAQELQQKRRVEVVDSFEELGLGEEVMAALGEMGISKPTEIQCVGVPAVLA 146

Query: 156 GKNVVLGYLNGPERALAYLLPLIQNLKRDEKRYG--TRSKHPRAFVMCPTAQLSEELFCM 215
           G +VVLG   G  + LAYLLPL+Q L+RDE   G   + + PRA V+CPT +L+E++F +
Sbjct: 147 GTSVVLGSHTGSGKTLAYLLPLVQLLRRDEAMLGMSMKPRRPRAVVLCPTRELTEQVFRV 206

Query: 216 AKYISNYRQLKTPRDNSCGELELQKSASDVSIGLLIGTPDEISELIEEGSVVLDEINYLV 275
           AK IS++ + ++   +    +  Q+ + ++ + +++GTP  I + I++G++V  +I YLV
Sbjct: 207 AKSISHHARFRSTMVSGGSRIRPQEDSLNMPVDMVVGTPGRILDHIKDGNMVYGDIKYLV 266

Query: 276 FDELDSMFDLGFGPNIKKILTSVRHCNEK-----CRSIVVTSTLIKMMHE 301
            DE D+MFD GFGP+I+K L  +++   K      ++++VT+T+ K + +
Sbjct: 267 LDEADTMFDQGFGPDIRKFLAPLKNRAAKPGDQGFQTVLVTATMTKAVQK 316

[Close]

BLAST of Pay0005850.1 vs. ExPASy Swiss-Prot
Match: Q7S9J4 (ATP-dependent RNA helicase dbp-10 OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) OX=367110 GN=dbp-10 PE=3 SV=1)

HSP 1 Score: 90.5 bits (223), Expect = 4.1e-17
Identity = 70/235 (29.79%), Postives = 110/235 (46.81%), Query Frame = 0


Query: 80  LKGLSKISQHSSSSNGGEKVMT--GFRQLGLCNELAGAVEEMGILAPSELDCAAIPAVLE 139
           +  L++ SQ  SS+  G+ V    GF+ +GL   L  A+   G   P+ +   AIP +LE
Sbjct: 76  IASLTRSSQRKSSNIQGKSVKKGGGFQAMGLNAHLLRAITRKGFSVPTPIQRKAIPLILE 135

Query: 140 GKNVVLGYLNGPERALAYLLPLIQNLKRDEKRYGTRSKHPRAFVMCPTAQLSEELFCMAK 199
            K+VV     G  +  A+++P+I+ LK    R G+     RA +M P+ +L+ +   + K
Sbjct: 136 RKDVVGMARTGSGKTAAFVIPMIERLKGHSPRVGS-----RALIMSPSRELALQTLKVVK 195

Query: 200 YISNYRQLKTPRDNSCGELELQKSASDVSIGLLIGTPDEISELIEEGSVVLDEINYLVFD 259
            +     LKT        LE Q      +  ++I TP     L  E ++ L  I Y+VFD
Sbjct: 196 ELGRGTDLKTVLLVGGDSLEEQFGMMASNPDIIIATPGRFLHLKVEMNLSLASIKYVVFD 255

Query: 260 ELDSMFDLGFGPNIKKILTSVRHCNEKCRSIVVTSTLIKMMHEQRSSLVKSLRCG 313
           E D +F++GF       LT + H     R  ++ S  +       SSLV+  R G
Sbjct: 256 EADRLFEMGFATE----LTEILHALPPSRQTLLFSATLP------SSLVEFARAG 295

[Close]

BLAST of Pay0005850.1 vs. ExPASy Swiss-Prot
Match: Q8TDD1 (ATP-dependent RNA helicase DDX54 OS=Homo sapiens OX=9606 GN=DDX54 PE=1 SV=2)

HSP 1 Score: 89.4 bits (220), Expect = 9.2e-17
Identity = 54/209 (25.84%), Postives = 105/209 (50.24%), Query Frame = 0


Query: 92  SSNGGEKVMTGFRQLGLCNELAGAVEEMGILAPSELDCAAIPAVLEGKNVVLGYLNGPER 151
           + N  +K   GF+ +GL   +   + + G   P+ +    IP +L+GK+VV     G  +
Sbjct: 87  AQNKKKKKSGGFQSMGLSYPVFKGIMKKGYKVPTPIQRKTIPVILDGKDVVAMARTGSGK 146

Query: 152 ALAYLLPLIQNLKRDEKRYGTRSKHPRAFVMCPTAQLSEELFCMAKYISNYRQLKTPRDN 211
              +LLP+ + LK    + G      RA ++ PT +L+ +     K +  +  LKT    
Sbjct: 147 TACFLLPMFERLKTHSAQTGA-----RALILSPTRELALQTLKFTKELGKFTGLKTALIL 206

Query: 212 SCGELELQKSASDVSIGLLIGTPDEISELIEEGSVVLDEINYLVFDELDSMFDLGFGPNI 271
               +E Q +A   +  ++I TP  +  +  E S+ L  + Y+VFDE D +F++GF   +
Sbjct: 207 GGDRMEDQFAALHENPDIIIATPGRLVHVAVEMSLKLQSVEYVVFDEADRLFEMGFAEQL 266

Query: 272 KKILTSVRHCNEKCRSIVVTSTLIKMMHE 301
           ++I+  +   ++   +++ ++TL K++ E
Sbjct: 267 QEIIARLPGGHQ---TVLFSATLPKLLVE 287

[Close]

BLAST of Pay0005850.1 vs. ExPASy Swiss-Prot
Match: Q4HZ42 (ATP-dependent RNA helicase DBP10 OS=Gibberella zeae (strain ATCC MYA-4620 / CBS 123657 / FGSC 9075 / NRRL 31084 / PH-1) OX=229533 GN=DBP10 PE=3 SV=1)

HSP 1 Score: 87.4 bits (215), Expect = 3.5e-16
Identity = 66/256 (25.78%), Postives = 117/256 (45.70%), Query Frame = 0


Query: 57  VENDQPPQSNRDSTLLEKFRLRKLKGLSKISQHSSSSNGGEKVMTGFRQLGLCNELAGAV 116
           + N +P   + D   +   +    +  + +   +    G      GF+ +GL N L  A+
Sbjct: 44  LNNPEPGNDDTDEAFIALQQAASFRKATNLKGRTVKKGG------GFQAMGLNNNLLKAI 103

Query: 117 EEMGILAPSELDCAAIPAVLEGKNVVLGYLNGPERALAYLLPLIQNLKRDEKRYGTRSKH 176
              G   P+ +   AIP +L+ K++V     G  +  A+++P+I+ L+    R+GT    
Sbjct: 104 TRKGFSVPTPIQRKAIPLILDRKDLVGMARTGSGKTAAFVIPMIEKLRAHSARFGT---- 163

Query: 177 PRAFVMCPTAQLSEELFCMAKYISNYRQLKTPRDNSCGELELQKSASDVSIGLLIGTPDE 236
            RA +M P+ +L+ +   + K  S    LK         LE Q      +  ++I TP  
Sbjct: 164 -RALIMSPSRELAIQTLKVVKEFSRGTDLKCVLLVGGDSLEEQFGYMAANPDIVIATPGR 223

Query: 237 ISELIEEGSVVLDEINYLVFDELDSMFDLGFGPNIKKILTSVRHCNEKCRSIVVTSTLIK 296
              L  E S+ L  I Y+VFDE D +F++GF   + +IL ++    +   S++ ++TL  
Sbjct: 224 FLHLKVEMSLDLSSIKYVVFDEADRLFEMGFAAQLTEILHALPPSRQ---SLLFSATL-- 278

Query: 297 MMHEQRSSLVKSLRCG 313
                 +SLV+  R G
Sbjct: 284 -----PASLVEFARAG 278

[Close]

BLAST of Pay0005850.1 vs. ExPASy TrEMBL
Match: A0A5A7SLY8 (DEAD-box ATP-dependent RNA helicase 39-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold139G003970 PE=4 SV=1)

HSP 1 Score: 689.9 bits (1779), Expect = 5.7e-195
Identity = 355/357 (99.44%), Postives = 355/357 (99.44%), Query Frame = 0


Query: 1   MGSRRKALLELSHCANILLSPTKRSIFPNFTLSTNALLASPFCSSTFSRSSADGTPVEND 60
           MGSRRKALLELSHCANILLSPTKRSIFPNF LS NALLASPFCSSTFSRSSADGTPVEND
Sbjct: 1   MGSRRKALLELSHCANILLSPTKRSIFPNFALSANALLASPFCSSTFSRSSADGTPVEND 60

Query: 61  QPPQSNRDSTLLEKFRLRKLKGLSKISQHSSSSNGGEKVMTGFRQLGLCNELAGAVEEMG 120
           QPPQSNRDSTLLEKFRLRKLKGLSKISQHSSSSNGGEKVMTGFRQLGLCNELAGAVEEMG
Sbjct: 61  QPPQSNRDSTLLEKFRLRKLKGLSKISQHSSSSNGGEKVMTGFRQLGLCNELAGAVEEMG 120

Query: 121 ILAPSELDCAAIPAVLEGKNVVLGYLNGPERALAYLLPLIQNLKRDEKRYGTRSKHPRAF 180
           ILAPSELDCAAIPAVLEGKNVVLGYLNGPERALAYLLPLIQNLKRDEKRYGTRSKHPRAF
Sbjct: 121 ILAPSELDCAAIPAVLEGKNVVLGYLNGPERALAYLLPLIQNLKRDEKRYGTRSKHPRAF 180

Query: 181 VMCPTAQLSEELFCMAKYISNYRQLKTPRDNSCGELELQKSASDVSIGLLIGTPDEISEL 240
           VMCPTAQLSEELFCMAKYISNYRQLKTPRDNSCGELELQKSASDVSIGLLIGTPDEISEL
Sbjct: 181 VMCPTAQLSEELFCMAKYISNYRQLKTPRDNSCGELELQKSASDVSIGLLIGTPDEISEL 240

Query: 241 IEEGSVVLDEINYLVFDELDSMFDLGFGPNIKKILTSVRHCNEKCRSIVVTSTLIKMMHE 300
           IEEGSVVLDEINYLVFDELDSMFDLGFGPNIKKILTSVRHCNEKCRSIVVTSTLIKMMHE
Sbjct: 241 IEEGSVVLDEINYLVFDELDSMFDLGFGPNIKKILTSVRHCNEKCRSIVVTSTLIKMMHE 300

Query: 301 QRSSLVKSLRCGDAGEIAAMVLEIEEEEAFHLMESPDALKSKLADVVESLRPSTQET 358
           QRSSLVKSLRCGDAGEIAAMVLEIEEEEAFHLMESPDALKSKLADVVESLRPSTQET
Sbjct: 301 QRSSLVKSLRCGDAGEIAAMVLEIEEEEAFHLMESPDALKSKLADVVESLRPSTQET 357

[Close]

BLAST of Pay0005850.1 vs. ExPASy TrEMBL
Match: A0A1S3C4L0 (DEAD-box ATP-dependent RNA helicase 39-like OS=Cucumis melo OX=3656 GN=LOC103496581 PE=4 SV=1)

HSP 1 Score: 689.9 bits (1779), Expect = 5.7e-195
Identity = 355/357 (99.44%), Postives = 355/357 (99.44%), Query Frame = 0


Query: 1   MGSRRKALLELSHCANILLSPTKRSIFPNFTLSTNALLASPFCSSTFSRSSADGTPVEND 60
           MGSRRKALLELSHCANILLSPTKRSIFPNF LS NALLASPFCSSTFSRSSADGTPVEND
Sbjct: 1   MGSRRKALLELSHCANILLSPTKRSIFPNFALSANALLASPFCSSTFSRSSADGTPVEND 60

Query: 61  QPPQSNRDSTLLEKFRLRKLKGLSKISQHSSSSNGGEKVMTGFRQLGLCNELAGAVEEMG 120
           QPPQSNRDSTLLEKFRLRKLKGLSKISQHSSSSNGGEKVMTGFRQLGLCNELAGAVEEMG
Sbjct: 61  QPPQSNRDSTLLEKFRLRKLKGLSKISQHSSSSNGGEKVMTGFRQLGLCNELAGAVEEMG 120

Query: 121 ILAPSELDCAAIPAVLEGKNVVLGYLNGPERALAYLLPLIQNLKRDEKRYGTRSKHPRAF 180
           ILAPSELDCAAIPAVLEGKNVVLGYLNGPERALAYLLPLIQNLKRDEKRYGTRSKHPRAF
Sbjct: 121 ILAPSELDCAAIPAVLEGKNVVLGYLNGPERALAYLLPLIQNLKRDEKRYGTRSKHPRAF 180

Query: 181 VMCPTAQLSEELFCMAKYISNYRQLKTPRDNSCGELELQKSASDVSIGLLIGTPDEISEL 240
           VMCPTAQLSEELFCMAKYISNYRQLKTPRDNSCGELELQKSASDVSIGLLIGTPDEISEL
Sbjct: 181 VMCPTAQLSEELFCMAKYISNYRQLKTPRDNSCGELELQKSASDVSIGLLIGTPDEISEL 240

Query: 241 IEEGSVVLDEINYLVFDELDSMFDLGFGPNIKKILTSVRHCNEKCRSIVVTSTLIKMMHE 300
           IEEGSVVLDEINYLVFDELDSMFDLGFGPNIKKILTSVRHCNEKCRSIVVTSTLIKMMHE
Sbjct: 241 IEEGSVVLDEINYLVFDELDSMFDLGFGPNIKKILTSVRHCNEKCRSIVVTSTLIKMMHE 300

Query: 301 QRSSLVKSLRCGDAGEIAAMVLEIEEEEAFHLMESPDALKSKLADVVESLRPSTQET 358
           QRSSLVKSLRCGDAGEIAAMVLEIEEEEAFHLMESPDALKSKLADVVESLRPSTQET
Sbjct: 301 QRSSLVKSLRCGDAGEIAAMVLEIEEEEAFHLMESPDALKSKLADVVESLRPSTQET 357

[Close]

BLAST of Pay0005850.1 vs. ExPASy TrEMBL
Match: A0A0A0KB87 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G052790 PE=4 SV=1)

HSP 1 Score: 643.7 bits (1659), Expect = 4.7e-181
Identity = 331/357 (92.72%), Postives = 340/357 (95.24%), Query Frame = 0


Query: 1   MGSRRKALLELSHCANILLSPTKRSIFPNFTLSTNALLASPFCSSTFSRSSADGTPVEND 60
           MGSRRKA+LE SHCANILLSPTKRSIFPN TLSTNA LAS FCSSTFSRSS DGTPVEN+
Sbjct: 1   MGSRRKAILEFSHCANILLSPTKRSIFPNSTLSTNAFLASQFCSSTFSRSSTDGTPVENE 60

Query: 61  QPPQSNRDSTLLEKFRLRKLKGLSKISQHSSSSNGGEKVMTGFRQLGLCNELAGAVEEMG 120
           QP QSNRDSTLLEKFRLRKLKGLSKISQ S SSNGGEK MTGFR LGLCNEL  AVE+MG
Sbjct: 61  QPRQSNRDSTLLEKFRLRKLKGLSKISQDSPSSNGGEKAMTGFRDLGLCNELGEAVEKMG 120

Query: 121 ILAPSELDCAAIPAVLEGKNVVLGYLNGPERALAYLLPLIQNLKRDEKRYGTRSKHPRAF 180
           +LAPSELDCA IPAVLEGKNVV GYL+ PERALAYLLPLIQNLKRDEKRYGTRSKHPRAF
Sbjct: 121 VLAPSELDCAGIPAVLEGKNVVFGYLDEPERALAYLLPLIQNLKRDEKRYGTRSKHPRAF 180

Query: 181 VMCPTAQLSEELFCMAKYISNYRQLKTPRDNSCGELELQKSASDVSIGLLIGTPDEISEL 240
           VMCPTAQLSEELFCMAKY SNYRQLKTPRDN CGELELQKSASDVSIGLLIGTPDEISEL
Sbjct: 181 VMCPTAQLSEELFCMAKYFSNYRQLKTPRDNGCGELELQKSASDVSIGLLIGTPDEISEL 240

Query: 241 IEEGSVVLDEINYLVFDELDSMFDLGFGPNIKKILTSVRHCNEKCRSIVVTSTLIKMMHE 300
           IE+GSVVLDEINYLVFDELDSMFDLGFGPNIKKILTSVR+CN+KC+SIVVTSTLIKMMHE
Sbjct: 241 IEDGSVVLDEINYLVFDELDSMFDLGFGPNIKKILTSVRNCNKKCQSIVVTSTLIKMMHE 300

Query: 301 QRSSLVKSLRCGDAGEIAAMVLEIEEEEAFHLMESPDALKSKLADVVESLRPSTQET 358
           QRSSLVKSLRCGDAGEIAAMVLEIEEEEAFHLMESPDALKSKLADVVESLRPSTQET
Sbjct: 301 QRSSLVKSLRCGDAGEIAAMVLEIEEEEAFHLMESPDALKSKLADVVESLRPSTQET 357

[Close]

BLAST of Pay0005850.1 vs. ExPASy TrEMBL
Match: A0A6J1BZL0 (DEAD-box ATP-dependent RNA helicase 39-like OS=Momordica charantia OX=3673 GN=LOC111006682 PE=4 SV=1)

HSP 1 Score: 483.0 bits (1242), Expect = 1.1e-132
Identity = 253/362 (69.89%), Postives = 295/362 (81.49%), Query Frame = 0


Query: 1   MGSRRKALLELSHCANILLSPTKRSIFPNFTLSTNALLASPFCSSTFSRSSADGTPVEND 60
           MGSR KALLELS  A +LL PT  S  P  + ST   L S   SS+FSR+SA  T  END
Sbjct: 1   MGSRTKALLELSRRAKLLLCPTNPSTLPKPSSSTTTSLISRIYSSSFSRTSAGDTAAEND 60

Query: 61  QPPQSNRDSTLLEKFRLRKLKGLSKISQHSSSSNGGEKVMTGFRQLGLCNELAGAVEEMG 120
           +PPQS+RDS LLEKFRLRKLKG SKI+Q SSSS   EKVMTGF++LGLCNE+A AVEEMG
Sbjct: 61  RPPQSDRDSMLLEKFRLRKLKGSSKITQESSSSTSAEKVMTGFKELGLCNEVAEAVEEMG 120

Query: 121 ILAPSELDCAAIPAVLEGKNVVLGYLNGPERALAYLLPLIQNLKRDEKRYGTRSKHPRAF 180
              PSEL C  IPA+LEGKNVVLG L+GPERALAYLLP IQ+LKRD K+   RSKHPRAF
Sbjct: 121 FFVPSELHCVGIPALLEGKNVVLGSLSGPERALAYLLPFIQSLKRDGKKNDIRSKHPRAF 180

Query: 181 VMCPTAQLSEELFCMAKYISNYRQLKTPRDNSCGELELQKSASDVSIGLLIGTPDEISEL 240
           ++C TA+LS+E+F MAK+IS Y QLK+ RDN+C +LELQ+  SDVSIG+L+GTPDE+SEL
Sbjct: 181 ILCSTAELSDEVFQMAKFISGYGQLKSSRDNNCAQLELQEGGSDVSIGMLVGTPDEVSEL 240

Query: 241 IEEGSVVLDEINYLVFDELDSMFDLGFGPNIKKILTSV-----RHCNEKCRSIVVTSTLI 300
           IEEGSVV DEI YLV DELD+MFDLGFGPNIKKILTS+     RHCN+KC+S+VVTST+I
Sbjct: 241 IEEGSVVPDEIKYLVLDELDTMFDLGFGPNIKKILTSLNHYTSRHCNQKCQSVVVTSTMI 300

Query: 301 KMMHEQRSSLVKSLRCGDAGEIAAMVLEIEEEEAFHLMESPDALKSKLADVVESLRPSTQ 358
           KM+HEQ SSLV+SL+  DAGEIAAM+LEI+E+EAFHLMESPD +K KLAD V+SL  ST+
Sbjct: 301 KMLHEQHSSLVESLKRDDAGEIAAMLLEIDEDEAFHLMESPDTMKCKLADAVKSLHASTK 360

[Close]

BLAST of Pay0005850.1 vs. ExPASy TrEMBL
Match: A0A6J1H541 (DEAD-box ATP-dependent RNA helicase 39-like OS=Cucurbita moschata OX=3662 GN=LOC111460659 PE=4 SV=1)

HSP 1 Score: 475.7 bits (1223), Expect = 1.7e-130
Identity = 259/370 (70.00%), Postives = 293/370 (79.19%), Query Frame = 0


Query: 1   MGSRRKALLELSHCANILLSPTKRSIFPNFTLSTNALLASPFCSSTFSRSSADGTPVEND 60
           MGSRRKALLEL H  N L  PTK ++F N   STNA LAS + SS+FSR+       END
Sbjct: 1   MGSRRKALLELYHYVNSLSCPTKGNVFHNPVNSTNAFLASRYFSSSFSRT----LTTEND 60

Query: 61  QPPQSNRDSTLLEKFRLRKLKGLSKISQHSSSS--------NGGEKVMTGFRQLGLCNEL 120
           +PP+++R++ LLEKFR RKLKG S IS+ S SS        NGGEKVMTGF++LGL NE+
Sbjct: 61  RPPRTDREAMLLEKFRNRKLKGSSNISRESLSSNSAVKGSGNGGEKVMTGFKELGLYNEV 120

Query: 121 AGAVEEMGILAPSELDCAAIPAVLEGKNVVLGYLNGPERALAYLLPLIQNLKRDEKRYGT 180
           A A E MG   PSEL C  IPA+LEGKNVVLG L GPERALAYLLPLIQNLKRD K  G 
Sbjct: 121 AEAAEGMGFFVPSELHCVGIPALLEGKNVVLGSLYGPERALAYLLPLIQNLKRDAKTNGV 180

Query: 181 RSKHPRAFVMCPTAQLSEELFCMAKYISNYRQLKTPRDNSCGELELQKSASDVSIGLLIG 240
           RSKHPRAFVMC T +LS+E+F MAK+ISNY+QLKT +DN  G+LELQ  ASDVSIGLLIG
Sbjct: 181 RSKHPRAFVMCSTTELSDEVFQMAKFISNYKQLKTAKDNGFGQLELQNGASDVSIGLLIG 240

Query: 241 TPDEISELIEEGSVVLDEINYLVFDELDSMFDLGFGPNIKKILTSV-----RHCNEKCRS 300
           TP+E+SELIE+GSVV DEI YLV DELD+MFDLGFGPNIKKILTSV     RHCN+KC+S
Sbjct: 241 TPNEVSELIEDGSVVSDEIKYLVLDELDTMFDLGFGPNIKKILTSVKQSTSRHCNQKCQS 300

Query: 301 IVVTSTLIKMMHEQRSSLVKSLRCGDAGEIAAMVLEIEEEEAFHLMESPDALKSKLADVV 358
           +VVTSTLIKM+HEQ SSLV+SL+  D GEIAAM+LEIEEEEAFHLMESPD LK KLAD V
Sbjct: 301 VVVTSTLIKMLHEQHSSLVESLKRSDGGEIAAMLLEIEEEEAFHLMESPDTLKCKLADAV 360

[Close]

BLAST of Pay0005850.1 vs. NCBI nr
Match: XP_008456722.1 (PREDICTED: DEAD-box ATP-dependent RNA helicase 39-like [Cucumis melo] >KAA0031628.1 DEAD-box ATP-dependent RNA helicase 39-like [Cucumis melo var. makuwa])

HSP 1 Score: 689.9 bits (1779), Expect = 1.2e-194
Identity = 355/357 (99.44%), Postives = 355/357 (99.44%), Query Frame = 0


Query: 1   MGSRRKALLELSHCANILLSPTKRSIFPNFTLSTNALLASPFCSSTFSRSSADGTPVEND 60
           MGSRRKALLELSHCANILLSPTKRSIFPNF LS NALLASPFCSSTFSRSSADGTPVEND
Sbjct: 1   MGSRRKALLELSHCANILLSPTKRSIFPNFALSANALLASPFCSSTFSRSSADGTPVEND 60

Query: 61  QPPQSNRDSTLLEKFRLRKLKGLSKISQHSSSSNGGEKVMTGFRQLGLCNELAGAVEEMG 120
           QPPQSNRDSTLLEKFRLRKLKGLSKISQHSSSSNGGEKVMTGFRQLGLCNELAGAVEEMG
Sbjct: 61  QPPQSNRDSTLLEKFRLRKLKGLSKISQHSSSSNGGEKVMTGFRQLGLCNELAGAVEEMG 120

Query: 121 ILAPSELDCAAIPAVLEGKNVVLGYLNGPERALAYLLPLIQNLKRDEKRYGTRSKHPRAF 180
           ILAPSELDCAAIPAVLEGKNVVLGYLNGPERALAYLLPLIQNLKRDEKRYGTRSKHPRAF
Sbjct: 121 ILAPSELDCAAIPAVLEGKNVVLGYLNGPERALAYLLPLIQNLKRDEKRYGTRSKHPRAF 180

Query: 181 VMCPTAQLSEELFCMAKYISNYRQLKTPRDNSCGELELQKSASDVSIGLLIGTPDEISEL 240
           VMCPTAQLSEELFCMAKYISNYRQLKTPRDNSCGELELQKSASDVSIGLLIGTPDEISEL
Sbjct: 181 VMCPTAQLSEELFCMAKYISNYRQLKTPRDNSCGELELQKSASDVSIGLLIGTPDEISEL 240

Query: 241 IEEGSVVLDEINYLVFDELDSMFDLGFGPNIKKILTSVRHCNEKCRSIVVTSTLIKMMHE 300
           IEEGSVVLDEINYLVFDELDSMFDLGFGPNIKKILTSVRHCNEKCRSIVVTSTLIKMMHE
Sbjct: 241 IEEGSVVLDEINYLVFDELDSMFDLGFGPNIKKILTSVRHCNEKCRSIVVTSTLIKMMHE 300

Query: 301 QRSSLVKSLRCGDAGEIAAMVLEIEEEEAFHLMESPDALKSKLADVVESLRPSTQET 358
           QRSSLVKSLRCGDAGEIAAMVLEIEEEEAFHLMESPDALKSKLADVVESLRPSTQET
Sbjct: 301 QRSSLVKSLRCGDAGEIAAMVLEIEEEEAFHLMESPDALKSKLADVVESLRPSTQET 357

[Close]

BLAST of Pay0005850.1 vs. NCBI nr
Match: XP_004141005.1 (DEAD-box ATP-dependent RNA helicase 39 [Cucumis sativus] >KGN46104.1 hypothetical protein Csa_004924 [Cucumis sativus])

HSP 1 Score: 643.7 bits (1659), Expect = 9.7e-181
Identity = 331/357 (92.72%), Postives = 340/357 (95.24%), Query Frame = 0


Query: 1   MGSRRKALLELSHCANILLSPTKRSIFPNFTLSTNALLASPFCSSTFSRSSADGTPVEND 60
           MGSRRKA+LE SHCANILLSPTKRSIFPN TLSTNA LAS FCSSTFSRSS DGTPVEN+
Sbjct: 1   MGSRRKAILEFSHCANILLSPTKRSIFPNSTLSTNAFLASQFCSSTFSRSSTDGTPVENE 60

Query: 61  QPPQSNRDSTLLEKFRLRKLKGLSKISQHSSSSNGGEKVMTGFRQLGLCNELAGAVEEMG 120
           QP QSNRDSTLLEKFRLRKLKGLSKISQ S SSNGGEK MTGFR LGLCNEL  AVE+MG
Sbjct: 61  QPRQSNRDSTLLEKFRLRKLKGLSKISQDSPSSNGGEKAMTGFRDLGLCNELGEAVEKMG 120

Query: 121 ILAPSELDCAAIPAVLEGKNVVLGYLNGPERALAYLLPLIQNLKRDEKRYGTRSKHPRAF 180
           +LAPSELDCA IPAVLEGKNVV GYL+ PERALAYLLPLIQNLKRDEKRYGTRSKHPRAF
Sbjct: 121 VLAPSELDCAGIPAVLEGKNVVFGYLDEPERALAYLLPLIQNLKRDEKRYGTRSKHPRAF 180

Query: 181 VMCPTAQLSEELFCMAKYISNYRQLKTPRDNSCGELELQKSASDVSIGLLIGTPDEISEL 240
           VMCPTAQLSEELFCMAKY SNYRQLKTPRDN CGELELQKSASDVSIGLLIGTPDEISEL
Sbjct: 181 VMCPTAQLSEELFCMAKYFSNYRQLKTPRDNGCGELELQKSASDVSIGLLIGTPDEISEL 240

Query: 241 IEEGSVVLDEINYLVFDELDSMFDLGFGPNIKKILTSVRHCNEKCRSIVVTSTLIKMMHE 300
           IE+GSVVLDEINYLVFDELDSMFDLGFGPNIKKILTSVR+CN+KC+SIVVTSTLIKMMHE
Sbjct: 241 IEDGSVVLDEINYLVFDELDSMFDLGFGPNIKKILTSVRNCNKKCQSIVVTSTLIKMMHE 300

Query: 301 QRSSLVKSLRCGDAGEIAAMVLEIEEEEAFHLMESPDALKSKLADVVESLRPSTQET 358
           QRSSLVKSLRCGDAGEIAAMVLEIEEEEAFHLMESPDALKSKLADVVESLRPSTQET
Sbjct: 301 QRSSLVKSLRCGDAGEIAAMVLEIEEEEAFHLMESPDALKSKLADVVESLRPSTQET 357

[Close]

BLAST of Pay0005850.1 vs. NCBI nr
Match: XP_038886391.1 (DEAD-box ATP-dependent RNA helicase 39-like [Benincasa hispida])

HSP 1 Score: 540.0 bits (1390), Expect = 1.5e-149
Identity = 285/359 (79.39%), Postives = 309/359 (86.07%), Query Frame = 0


Query: 1   MGSRRKALLELSHCANILLSPTKRSIFPNFTLSTNALLASPFCSSTFSRSSADGTPVEND 60
           MGSRRKAL ELSH AN LL PTKRS FPN TLS NA LAS   SS FSR+S DGT +END
Sbjct: 1   MGSRRKALFELSHYANSLLCPTKRSTFPNLTLSRNAFLASRLHSSAFSRTSTDGTAMEND 60

Query: 61  QPPQSNRDSTLLEKFRLRKLKGLSKISQHSS--SSNGGEKVMTGFRQLGLCNELAGAVEE 120
           QPPQSNRD+ LLEKFRLRKLKG SK+SQ SS  SSN GEKV+TGF++LGLCNELA AVEE
Sbjct: 61  QPPQSNRDAMLLEKFRLRKLKGSSKVSQESSSTSSNRGEKVITGFKELGLCNELAEAVEE 120

Query: 121 MGILAPSELDCAAIPAVLEGKNVVLGYLNGPERALAYLLPLIQNLKRDEKRYGTRSKHPR 180
           MGI APSEL C  IPA+LEGKNVVLG L GPERALAYLLPLIQNLKRD K+YG RSKHPR
Sbjct: 121 MGIFAPSELHCVGIPALLEGKNVVLGSLYGPERALAYLLPLIQNLKRDGKKYGVRSKHPR 180

Query: 181 AFVMCPTAQLSEELFCMAKYISNYRQLKTPRDNSCGELELQKSASDVSIGLLIGTPDEIS 240
           AFV+C + +LS+E+F MAK+ISNYRQL T RDN C ELELQKSASD+SIGLLIGTP EI 
Sbjct: 181 AFVLCSSVELSDEVFQMAKFISNYRQLATARDNGCIELELQKSASDISIGLLIGTPGEIL 240

Query: 241 ELIEEGSVVLDEINYLVFDELDSMFDLGFGPNIKKILTSVRHCNEKCRSIVVTSTLIKMM 300
           +LIEEGSVV DEINYLV DELDSMFDLGFGPNIK ILTSVRHCNEKC+S+V+TST IKM+
Sbjct: 241 KLIEEGSVVPDEINYLVLDELDSMFDLGFGPNIKDILTSVRHCNEKCQSVVLTSTFIKML 300

Query: 301 HEQRSSLVKSLRCGDAGEIAAMVLEIEEEEAFHLMESPDALKSKLADVVESLRPSTQET 358
           HEQ SSLV+SL+ GD GEIAAM+LEIEEEEAFHLMESPD LK KLADVVESL  STQ T
Sbjct: 301 HEQHSSLVESLKRGDTGEIAAMLLEIEEEEAFHLMESPDTLKCKLADVVESLCASTQRT 359

[Close]

BLAST of Pay0005850.1 vs. NCBI nr
Match: XP_022134432.1 (DEAD-box ATP-dependent RNA helicase 39-like [Momordica charantia])

HSP 1 Score: 483.0 bits (1242), Expect = 2.2e-132
Identity = 253/362 (69.89%), Postives = 295/362 (81.49%), Query Frame = 0


Query: 1   MGSRRKALLELSHCANILLSPTKRSIFPNFTLSTNALLASPFCSSTFSRSSADGTPVEND 60
           MGSR KALLELS  A +LL PT  S  P  + ST   L S   SS+FSR+SA  T  END
Sbjct: 1   MGSRTKALLELSRRAKLLLCPTNPSTLPKPSSSTTTSLISRIYSSSFSRTSAGDTAAEND 60

Query: 61  QPPQSNRDSTLLEKFRLRKLKGLSKISQHSSSSNGGEKVMTGFRQLGLCNELAGAVEEMG 120
           +PPQS+RDS LLEKFRLRKLKG SKI+Q SSSS   EKVMTGF++LGLCNE+A AVEEMG
Sbjct: 61  RPPQSDRDSMLLEKFRLRKLKGSSKITQESSSSTSAEKVMTGFKELGLCNEVAEAVEEMG 120

Query: 121 ILAPSELDCAAIPAVLEGKNVVLGYLNGPERALAYLLPLIQNLKRDEKRYGTRSKHPRAF 180
              PSEL C  IPA+LEGKNVVLG L+GPERALAYLLP IQ+LKRD K+   RSKHPRAF
Sbjct: 121 FFVPSELHCVGIPALLEGKNVVLGSLSGPERALAYLLPFIQSLKRDGKKNDIRSKHPRAF 180

Query: 181 VMCPTAQLSEELFCMAKYISNYRQLKTPRDNSCGELELQKSASDVSIGLLIGTPDEISEL 240
           ++C TA+LS+E+F MAK+IS Y QLK+ RDN+C +LELQ+  SDVSIG+L+GTPDE+SEL
Sbjct: 181 ILCSTAELSDEVFQMAKFISGYGQLKSSRDNNCAQLELQEGGSDVSIGMLVGTPDEVSEL 240

Query: 241 IEEGSVVLDEINYLVFDELDSMFDLGFGPNIKKILTSV-----RHCNEKCRSIVVTSTLI 300
           IEEGSVV DEI YLV DELD+MFDLGFGPNIKKILTS+     RHCN+KC+S+VVTST+I
Sbjct: 241 IEEGSVVPDEIKYLVLDELDTMFDLGFGPNIKKILTSLNHYTSRHCNQKCQSVVVTSTMI 300

Query: 301 KMMHEQRSSLVKSLRCGDAGEIAAMVLEIEEEEAFHLMESPDALKSKLADVVESLRPSTQ 358
           KM+HEQ SSLV+SL+  DAGEIAAM+LEI+E+EAFHLMESPD +K KLAD V+SL  ST+
Sbjct: 301 KMLHEQHSSLVESLKRDDAGEIAAMLLEIDEDEAFHLMESPDTMKCKLADAVKSLHASTK 360

[Close]

BLAST of Pay0005850.1 vs. NCBI nr
Match: XP_022959642.1 (DEAD-box ATP-dependent RNA helicase 39-like [Cucurbita moschata])

HSP 1 Score: 475.7 bits (1223), Expect = 3.5e-130
Identity = 259/370 (70.00%), Postives = 293/370 (79.19%), Query Frame = 0


Query: 1   MGSRRKALLELSHCANILLSPTKRSIFPNFTLSTNALLASPFCSSTFSRSSADGTPVEND 60
           MGSRRKALLEL H  N L  PTK ++F N   STNA LAS + SS+FSR+       END
Sbjct: 1   MGSRRKALLELYHYVNSLSCPTKGNVFHNPVNSTNAFLASRYFSSSFSRT----LTTEND 60

Query: 61  QPPQSNRDSTLLEKFRLRKLKGLSKISQHSSSS--------NGGEKVMTGFRQLGLCNEL 120
           +PP+++R++ LLEKFR RKLKG S IS+ S SS        NGGEKVMTGF++LGL NE+
Sbjct: 61  RPPRTDREAMLLEKFRNRKLKGSSNISRESLSSNSAVKGSGNGGEKVMTGFKELGLYNEV 120

Query: 121 AGAVEEMGILAPSELDCAAIPAVLEGKNVVLGYLNGPERALAYLLPLIQNLKRDEKRYGT 180
           A A E MG   PSEL C  IPA+LEGKNVVLG L GPERALAYLLPLIQNLKRD K  G 
Sbjct: 121 AEAAEGMGFFVPSELHCVGIPALLEGKNVVLGSLYGPERALAYLLPLIQNLKRDAKTNGV 180

Query: 181 RSKHPRAFVMCPTAQLSEELFCMAKYISNYRQLKTPRDNSCGELELQKSASDVSIGLLIG 240
           RSKHPRAFVMC T +LS+E+F MAK+ISNY+QLKT +DN  G+LELQ  ASDVSIGLLIG
Sbjct: 181 RSKHPRAFVMCSTTELSDEVFQMAKFISNYKQLKTAKDNGFGQLELQNGASDVSIGLLIG 240

Query: 241 TPDEISELIEEGSVVLDEINYLVFDELDSMFDLGFGPNIKKILTSV-----RHCNEKCRS 300
           TP+E+SELIE+GSVV DEI YLV DELD+MFDLGFGPNIKKILTSV     RHCN+KC+S
Sbjct: 241 TPNEVSELIEDGSVVSDEIKYLVLDELDTMFDLGFGPNIKKILTSVKQSTSRHCNQKCQS 300

Query: 301 IVVTSTLIKMMHEQRSSLVKSLRCGDAGEIAAMVLEIEEEEAFHLMESPDALKSKLADVV 358
           +VVTSTLIKM+HEQ SSLV+SL+  D GEIAAM+LEIEEEEAFHLMESPD LK KLAD V
Sbjct: 301 VVVTSTLIKMLHEQHSSLVESLKRSDGGEIAAMLLEIEEEEAFHLMESPDTLKCKLADAV 360

[Close]

BLAST of Pay0005850.1 vs. TAIR 10
Match: AT4G09730.1 (RH39 )

HSP 1 Score: 167.2 bits (422), Expect = 2.5e-41
Identity = 97/272 (35.66%), Postives = 162/272 (59.56%), Query Frame = 0


Query: 41  PFCSSTFSRSSADGTPVENDQPPQSNRDSTLLEKFRLRKLKGLSK-----------ISQH 100
           P  S+  + SS   T   N   P   + + LLE+ RLR LK  +K           + + 
Sbjct: 43  PLYSAAATTSSP--TTETNVTDPDQLKHTILLERLRLRHLKESAKPPQQRPSSVVGVEEE 102

Query: 101 SSSSNGGEKVMTGFRQLGLCNELAGAVEEMGILAPSELDCAAIPAVLEGKNVVLGYLNGP 160
           SS     +K++  F++LGL  E+ GA++E+ I  P+E+ C  IPAV+E K+VVLG   G 
Sbjct: 103 SSIRKKSKKLVENFQELGLSEEVMGALQELNIEVPTEIQCIGIPAVMERKSVVLGSHTGS 162

Query: 161 ERALAYLLPLIQNLKRDEKRYG--TRSKHPRAFVMCPTAQLSEELFCMAKYISNYRQLKT 220
            + LAYLLP++Q ++ DE   G  T+ + PR  V+CPT +LSE+++ +AK IS++ + ++
Sbjct: 163 GKTLAYLLPIVQLMREDEANLGKKTKPRRPRTVVLCPTRELSEQVYRVAKSISHHARFRS 222

Query: 221 PRDNSCGELELQKSASDVSIGLLIGTPDEISELIEEGSVVLDEINYLVFDELDSMFDLGF 280
              +    +  Q+ + + +I +++GTP  I + IEEG++V  +I YLV DE D+MFD GF
Sbjct: 223 ILVSGGSRIRPQEDSLNNAIDMVVGTPGRILQHIEEGNMVYGDIAYLVLDEADTMFDRGF 282

Query: 281 GPNIKKILT-----SVRHCNEKCRSIVVTSTL 295
           GP I+K L      +++  ++  ++++VT+T+
Sbjct: 283 GPEIRKFLAPLNQRALKTNDQGFQTVLVTATM 312

[Close]

BLAST of Pay0005850.1 vs. TAIR 10
Match: AT2G42520.1 (P-loop containing nucleoside triphosphate hydrolases superfamily protein )

HSP 1 Score: 84.3 bits (207), Expect = 2.1e-16
Identity = 60/239 (25.10%), Postives = 111/239 (46.44%), Query Frame = 0


Query: 44  SSTFSRSSADGTPVEND----QPPQSNRDSTLLEKFRLRKLKGLSKISQHSSSSNGGEKV 103
           S  + R   +  P END    +P  + +D+T++             I   +S  N    V
Sbjct: 105 SGGWDRREREVNPFENDDSEPEPAFTEQDNTVI------NFDAYEDIPIETSGDNVPPPV 164

Query: 104 MTGFRQLGLCNELAGAVEEMGILAPSELDCAAIPAVLEGKNVVLGYLNGPERALAYLLPL 163
            T F ++ L   L   +     + P+ +   AIP +LEG++++     G  +  A+  P+
Sbjct: 165 NT-FAEIDLGEALNLNIRRCKYVKPTPVQRHAIPILLEGRDLMACAQTGSGKTAAFCFPI 224

Query: 164 IQNLKRD---EKRYGTRSKHPRAFVMCPTAQLSEELFCMAKYISNYRQLKTPRDNSCGEL 223
           I  + +D   ++  G+R+ +P A ++ PT +L+ ++   AK  S    +K         +
Sbjct: 225 ISGIMKDQHVQRPRGSRTVYPLAVILSPTRELASQIHDEAKKFSYQTGVKVVVAYGGTPI 284

Query: 224 ELQKSASDVSIGLLIGTPDEISELIEEGSVVLDEINYLVFDELDSMFDLGFGPNIKKIL 276
             Q    +  + +L+ TP  +++L+E   V +  I +L  DE D M D+GF P I+KI+
Sbjct: 285 NQQLRELERGVDILVATPGRLNDLLERARVSMQMIRFLALDEADRMLDMGFEPQIRKIV 336

[Close]

BLAST of Pay0005850.1 vs. TAIR 10
Match: AT2G47330.1 (P-loop containing nucleoside triphosphate hydrolases superfamily protein )

HSP 1 Score: 82.8 bits (203), Expect = 6.1e-16
Identity = 45/179 (25.14%), Postives = 91/179 (50.84%), Query Frame = 0


Query: 103 FRQLGLCNELAGAVEEMGILAPSELDCAAIPAVLEGKNVVLGYLNGPERALAYLLPLIQN 162
           F   G  +++  A+++     P+ + C A+P VL G++V+     G  +  A++LP+I +
Sbjct: 230 FEDCGFSSQIMSAIKKQAYEKPTAIQCQALPIVLSGRDVIGIAKTGSGKTAAFVLPMIVH 289

Query: 163 LKRDEKRYGTRSKHPRAFVMCPTAQLSEELFCMAKYISNYRQLKTPRDNSCGELELQKSA 222
           +    +    R + P   +  PT +L+ ++F  AK  S    L+       G +   +  
Sbjct: 290 IMDQPEL--QRDEGPIGVICAPTRELAHQIFLEAKKFSKAYGLRV--SAVYGGMSKHEQF 349

Query: 223 SDVSIG--LLIGTPDEISELIEEGSVVLDEINYLVFDELDSMFDLGFGPNIKKILTSVR 280
            ++  G  +++ TP  + ++++  ++ +   +YLV DE D MFDLGF P ++ I+  +R
Sbjct: 350 KELKAGCEIVVATPGRLIDMLKMKALTMMRASYLVLDEADRMFDLGFEPQVRSIVGQIR 404

[Close]

BLAST of Pay0005850.1 vs. TAIR 10
Match: AT5G14610.2 (DEAD box RNA helicase family protein )

HSP 1 Score: 82.4 bits (202), Expect = 8.0e-16
Identity = 73/322 (22.67%), Postives = 144/322 (44.72%), Query Frame = 0


Query: 38  LASPFCSSTFSRSSADGTPVENDQPPQSNRDSTLLEKFRLRKLKGLSKISQHSSSSNGGE 97
           ++S   +S    +S+ G+      PP S   + L  +   RK         H  + +GG+
Sbjct: 107 ISSNDAASGLGNASSGGSSARG--PPSSAAGNELSPEAYCRK---------HEITVSGGQ 166

Query: 98  --KVMTGFRQLGLCNELAGAVEEMGILAPSELDCAAIPAVLEGKNVVLGYLNGPERALAY 157
               +  F   GL NEL   V   G  APS +   + P  ++ +++V     G  + L Y
Sbjct: 167 VPPPLMSFEATGLPNELLREVYSAGFSAPSPIQAQSWPIAMQNRDIVAIAKTGSGKTLGY 226

Query: 158 LLPLIQNLKR--DEKRYGTRSKHPRAFVMCPTAQLSEELFCMAKYISNYRQLKTPRDNSC 217
           L+P   +L+R  ++ R G     P   V+ PT +L+ ++   A       ++        
Sbjct: 227 LIPGFMHLQRIHNDSRMG-----PTILVLSPTRELATQIQVEALKFGKSSKISCACLYGG 286

Query: 218 GELELQKSASDVSIGLLIGTPDEISELIEEGSVVLDEINYLVFDELDSMFDLGFGPNIKK 277
                Q    +  + +++ TP  +++++E   + L +++YLV DE D M D+GF P I+K
Sbjct: 287 APKGPQLKEIERGVDIVVATPGRLNDILEMKRISLHQVSYLVLDEADRMLDMGFEPQIRK 346

Query: 278 ILTSVRHCNEKCRSIVVTSTLIKMMHEQRSSLVKSLRCGDAGEIAAMVLEIEEEEAFHLM 337
           I+  V     K ++++ T+T  K + +  + L+ +    + G +  +V      +   ++
Sbjct: 347 IVNEV---PTKRQTLMYTATWPKEVRKIAADLLVNPAQVNIGNVDELVANKSITQTIEVL 406

Query: 338 ESPDALKSKLADVVESLRPSTQ 356
            +P    S+L  ++ S  P ++
Sbjct: 407 -APMEKHSRLEQILRSQEPGSK 408

[Close]

BLAST of Pay0005850.1 vs. TAIR 10
Match: AT2G33730.1 (P-loop containing nucleoside triphosphate hydrolases superfamily protein )

HSP 1 Score: 79.7 bits (195), Expect = 5.2e-15
Identity = 51/186 (27.42%), Postives = 89/186 (47.85%), Query Frame = 0


Query: 100 MTGFRQLGLCNELAGAVEEMGILAPSELDCAAIPAVLEGKNVVLGYLNGPERALAYLLPL 159
           M  + +  L +EL  AVE  G   PS +  AAIP  L+ ++V+     G  +  A++LP+
Sbjct: 312 MRSWEESKLTSELLKAVERAGYKKPSPIQMAAIPLGLQQRDVIGIAETGSGKTAAFVLPM 371

Query: 160 IQNLKR-DEKRYGTRSKHPRAFVMCPTAQLSEELFCMAKYISNYRQLKTPRDNSCGELEL 219
           +  + R         ++ P A VM PT +L++++       ++Y   +         +E 
Sbjct: 372 LAYISRLPPMSEENETEGPYAVVMAPTRELAQQIEEETVKFAHYLGFRVTSIVGGQSIEE 431

Query: 220 QKSASDVSIGLLIGTPDEISELIEEGSVVLDEINYLVFDELDSMFDLGFGPNIKKILTSV 279
           Q         ++I TP  + + +E    VL++ NY+V DE D M D+GF P +  +L ++
Sbjct: 432 QGLKITQGCEIVIATPGRLIDCLERRYAVLNQCNYVVLDEADRMIDMGFEPQVAGVLDAM 491

Query: 280 RHCNEK 285
              N K
Sbjct: 492 PSSNLK 497

The following BLAST results are available for this feature:

BLAST of Pay0005850.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q56X76	3.5e-40	35.66	DEAD-box ATP-dependent RNA helicase 39 OS=Arabidopsis thaliana OX=3702 GN=RH39 P...	[more]
Q5VRY0	4.5e-40	34.83	DEAD-box ATP-dependent RNA helicase 39 OS=Oryza sativa subsp. japonica OX=39947 ...	[more]
Q7S9J4	4.1e-17	29.79	ATP-dependent RNA helicase dbp-10 OS=Neurospora crassa (strain ATCC 24698 / 74-O...	[more]
Q8TDD1	9.2e-17	25.84	ATP-dependent RNA helicase DDX54 OS=Homo sapiens OX=9606 GN=DDX54 PE=1 SV=2	[more]
Q4HZ42	3.5e-16	25.78	ATP-dependent RNA helicase DBP10 OS=Gibberella zeae (strain ATCC MYA-4620 / CBS ...	[more]

BLAST of Pay0005850.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7SLY8	5.7e-195	99.44	DEAD-box ATP-dependent RNA helicase 39-like OS=Cucumis melo var. makuwa OX=11946...	[more]
A0A1S3C4L0	5.7e-195	99.44	DEAD-box ATP-dependent RNA helicase 39-like OS=Cucumis melo OX=3656 GN=LOC103496...	[more]
A0A0A0KB87	4.7e-181	92.72	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G052790 PE=4 SV=1	[more]
A0A6J1BZL0	1.1e-132	69.89	DEAD-box ATP-dependent RNA helicase 39-like OS=Momordica charantia OX=3673 GN=LO...	[more]
A0A6J1H541	1.7e-130	70.00	DEAD-box ATP-dependent RNA helicase 39-like OS=Cucurbita moschata OX=3662 GN=LOC...	[more]

BLAST of Pay0005850.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008456722.1	1.2e-194	99.44	PREDICTED: DEAD-box ATP-dependent RNA helicase 39-like [Cucumis melo] >KAA003162...	[more]
XP_004141005.1	9.7e-181	92.72	DEAD-box ATP-dependent RNA helicase 39 [Cucumis sativus] >KGN46104.1 hypothetica...	[more]
XP_038886391.1	1.5e-149	79.39	DEAD-box ATP-dependent RNA helicase 39-like [Benincasa hispida]	[more]
XP_022134432.1	2.2e-132	69.89	DEAD-box ATP-dependent RNA helicase 39-like [Momordica charantia]	[more]
XP_022959642.1	3.5e-130	70.00	DEAD-box ATP-dependent RNA helicase 39-like [Cucurbita moschata]	[more]

BLAST of Pay0005850.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G09730.1	2.5e-41	35.66	RH39	[more]
AT2G42520.1	2.1e-16	25.10	P-loop containing nucleoside triphosphate hydrolases superfamily protein	[more]
AT2G47330.1	6.1e-16	25.14	P-loop containing nucleoside triphosphate hydrolases superfamily protein	[more]
AT5G14610.2	8.0e-16	22.67	DEAD box RNA helicase family protein	[more]
AT2G33730.1	5.2e-15	27.42	P-loop containing nucleoside triphosphate hydrolases superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Payzawat) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR014001	Helicase superfamily 1/2, ATP-binding domain	SMART	SM00487	ultradead3	coord: 120..327 e-value: 0.0036 score: 21.4
IPR014001	Helicase superfamily 1/2, ATP-binding domain	PROSITE	PS51192	HELICASE_ATP_BIND_1	coord: 132..312 score: 15.362957
IPR011545	DEAD/DEAH box helicase domain	PFAM	PF00270	DEAD	coord: 130..295 e-value: 3.4E-20 score: 72.5
IPR027417	P-loop containing nucleoside triphosphate hydrolase	GENE3D	3.40.50.300		coord: 91..310 e-value: 1.4E-34 score: 121.2
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	52540	P-loop containing nucleoside triphosphate hydrolases	coord: 99..298
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 50..69
None	No IPR available	PANTHER	PTHR47960:SF6	DEAD-BOX ATP-DEPENDENT RNA HELICASE 39-LIKE	coord: 93..351
None	No IPR available	PANTHER	PTHR47960	DEAD-BOX ATP-DEPENDENT RNA HELICASE 50	coord: 93..351
IPR036053	PABC (PABP) domain	SUPERFAMILY	63570	PABC (PABP) domain	coord: 305..354

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Pay0005850	Pay0005850	gene

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Pay0005850.1-three_prime_utr	Pay0005850.1-three_prime_utr-chr03:20862765..20863815	three_prime_UTR

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Pay0005850.1-exon	Pay0005850.1-exon-chr03:20862765..20864001	exon
Pay0005850.1-exon	Pay0005850.1-exon-chr03:20864099..20864224	exon
Pay0005850.1-exon	Pay0005850.1-exon-chr03:20864578..20864766	exon
Pay0005850.1-exon	Pay0005850.1-exon-chr03:20864851..20864940	exon
Pay0005850.1-exon	Pay0005850.1-exon-chr03:20871643..20872298	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Pay0005850.1-cds	Pay0005850.1-cds-chr03:20863816..20864001	CDS
Pay0005850.1-cds	Pay0005850.1-cds-chr03:20864099..20864224	CDS
Pay0005850.1-cds	Pay0005850.1-cds-chr03:20864578..20864766	CDS
Pay0005850.1-cds	Pay0005850.1-cds-chr03:20864851..20864940	CDS
Pay0005850.1-cds	Pay0005850.1-cds-chr03:20871643..20872125	CDS

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Pay0005850.1-five_prime_utr	Pay0005850.1-five_prime_utr-chr03:20872126..20872298	five_prime_UTR

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Pay0005850.1	Pay0005850.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:1902775	mitochondrial large ribosomal subunit assembly
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005739	mitochondrion
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0003723	RNA binding
molecular_function	GO:0004386	helicase activity