Pay0005760.1 (mRNA) Melon (Payzawat) v1

Overview


Name	Pay0005760.1
Type	mRNA
Organism	Cucumis melo L. var. inodorus cv. Payzawat (Melon (Payzawat) v1)
Description	Precursor of CEP3
Location	Contig00104_ERROPOS3598216: 49632 .. 49955 (-)
Sequence length	324
RNA-Seq Expression	Pay0005760.1
Synteny	Pay0005760.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCCTCAACCAAGCTAAGCTTTGCTTTTCTTTTCATTTCCCTTTTAATTTTGTGTCATCTTATAGATCCTGCATTCAGCAGGCCATTGACAACCCACACAGATCACCAACAACTTTCTAACACCCTTCCAACAAACCCCCATTTCCAATTCCATGGTCACACTGTGCATGAAGGAAAAGCCTCAAACAACGACGCTGTTTCTACTCCAAACCCGAACCCTCCCACAGCAGCTGCGGGTTCGACTCCAGGCCGGAAGATGGACGACTTCAGGCCAACCACCCCTGGCCATAGCCCTGGCGTTGGTCATTCCATTAAGAACTAA

mRNA sequence

ATGGCCTCAACCAAGCTAAGCTTTGCTTTTCTTTTCATTTCCCTTTTAATTTTGTGTCATCTTATAGATCCTGCATTCAGCAGGCCATTGACAACCCACACAGATCACCAACAACTTTCTAACACCCTTCCAACAAACCCCCATTTCCAATTCCATGGTCACACTGTGCATGAAGGAAAAGCCTCAAACAACGACGCTGTTTCTACTCCAAACCCGAACCCTCCCACAGCAGCTGCGGGTTCGACTCCAGGCCGGAAGATGGACGACTTCAGGCCAACCACCCCTGGCCATAGCCCTGGCGTTGGTCATTCCATTAAGAACTAA

Coding sequence (CDS)

ATGGCCTCAACCAAGCTAAGCTTTGCTTTTCTTTTCATTTCCCTTTTAATTTTGTGTCATCTTATAGATCCTGCATTCAGCAGGCCATTGACAACCCACACAGATCACCAACAACTTTCTAACACCCTTCCAACAAACCCCCATTTCCAATTCCATGGTCACACTGTGCATGAAGGAAAAGCCTCAAACAACGACGCTGTTTCTACTCCAAACCCGAACCCTCCCACAGCAGCTGCGGGTTCGACTCCAGGCCGGAAGATGGACGACTTCAGGCCAACCACCCCTGGCCATAGCCCTGGCGTTGGTCATTCCATTAAGAACTAA

Protein sequence

MASTKLSFAFLFISLLILCHLIDPAFSRPLTTHTDHQQLSNTLPTNPHFQFHGHTVHEGKASNNDAVSTPNPNPPTAAAGSTPGRKMDDFRPTTPGHSPGVGHSIKN

Homology

[Close]

BLAST of Pay0005760.1 vs. ExPASy Swiss-Prot
Match: Q058G9 (Precursor of CEP5 OS=Arabidopsis thaliana OX=3702 GN=CEP5 PE=1 SV=1)

HSP 1 Score: 48.5 bits (114), Expect = 5.4e-05
Identity = 22/40 (55.00%), Postives = 29/40 (72.50%), Query Frame = 0


Query: 68  STPNPNPPTAAAGSTPGRKMDDFRPTTPGHSPGVGHSIKN 108
           S P P PP + +G   G+  +DFRPTTPGHSPG+GHS+ +
Sbjct: 68  SPPPPPPPPSQSG---GKDAEDFRPTTPGHSPGIGHSLSH 104

[Close]

BLAST of Pay0005760.1 vs. ExPASy Swiss-Prot
Match: A0A1I9LMX5 (Precursor of CEP9 OS=Arabidopsis thaliana OX=3702 GN=CEP9 PE=1 SV=1)

HSP 1 Score: 48.5 bits (114), Expect = 5.4e-05
Identity = 21/31 (67.74%), Postives = 27/31 (87.10%), Query Frame = 0


Query: 80  GSTPG---RKMDDFRPTTPGHSPGVGHSIKN 108
           G++PG   +K DDF+PTTPGHSPGVGH++KN
Sbjct: 208 GNSPGMGHKKGDDFKPTTPGHSPGVGHAVKN 238

[Close]

BLAST of Pay0005760.1 vs. ExPASy Swiss-Prot
Match: O80460 (Precursor of CEP3 OS=Arabidopsis thaliana OX=3702 GN=CEP3 PE=1 SV=1)

HSP 1 Score: 46.2 bits (108), Expect = 2.7e-04
Identity = 21/40 (52.50%), Postives = 26/40 (65.00%), Query Frame = 0


Query: 68  STPNPNPPTAAAGSTPGRKMDDFRPTTPGHSPGVGHSIKN 108
           S  + +PPT    S P   +D FRPT PGHSPG+GHS+ N
Sbjct: 43  SVLSSSPPTEPLESPPSHGVDTFRPTEPGHSPGIGHSVHN 82

[Close]

BLAST of Pay0005760.1 vs. ExPASy Swiss-Prot
Match: B3H5A9 (Precursor of CEP6 OS=Arabidopsis thaliana OX=3702 GN=CEP6 PE=1 SV=1)

HSP 1 Score: 45.1 bits (105), Expect = 6.0e-04
Identity = 18/24 (75.00%), Postives = 20/24 (83.33%), Query Frame = 0


Query: 84  GRKMDDFRPTTPGHSPGVGHSIKN 108
           G   DDF PTTPGHSPGVGH++KN
Sbjct: 73  GGYKDDFEPTTPGHSPGVGHAVKN 96

[Close]

BLAST of Pay0005760.1 vs. ExPASy TrEMBL
Match: A0A5D3CLS2 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G004910 PE=3 SV=1)

HSP 1 Score: 219.5 bits (558), Expect = 6.5e-54
Identity = 107/107 (100.00%), Postives = 107/107 (100.00%), Query Frame = 0


Query: 1   MASTKLSFAFLFISLLILCHLIDPAFSRPLTTHTDHQQLSNTLPTNPHFQFHGHTVHEGK 60
           MASTKLSFAFLFISLLILCHLIDPAFSRPLTTHTDHQQLSNTLPTNPHFQFHGHTVHEGK
Sbjct: 1   MASTKLSFAFLFISLLILCHLIDPAFSRPLTTHTDHQQLSNTLPTNPHFQFHGHTVHEGK 60

Query: 61  ASNNDAVSTPNPNPPTAAAGSTPGRKMDDFRPTTPGHSPGVGHSIKN 108
           ASNNDAVSTPNPNPPTAAAGSTPGRKMDDFRPTTPGHSPGVGHSIKN
Sbjct: 61  ASNNDAVSTPNPNPPTAAAGSTPGRKMDDFRPTTPGHSPGVGHSIKN 107

[Close]

BLAST of Pay0005760.1 vs. ExPASy TrEMBL
Match: A0A0A0KLC0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G490800 PE=3 SV=1)

HSP 1 Score: 195.7 bits (496), Expect = 1.0e-46
Identity = 95/107 (88.79%), Postives = 101/107 (94.39%), Query Frame = 0


Query: 1   MASTKLSFAFLFISLLILCHLIDPAFSRPLTTHTDHQQLSNTLPTNPHFQFHGHTVHEGK 60
           MA TKLSFAFLFISLLILCHL+DPAFSRPLTTHT HQQLS+TLP NPHFQ HG T+HEGK
Sbjct: 5   MAPTKLSFAFLFISLLILCHLVDPAFSRPLTTHTIHQQLSDTLPKNPHFQLHGQTLHEGK 64

Query: 61  ASNNDAVSTPNPNPPTAAAGSTPGRKMDDFRPTTPGHSPGVGHSIKN 108
           ASN+DAVSTPNPNPP+AAA STPGRKMDDFRPTTPGHSPGVGHSI+N
Sbjct: 65  ASNDDAVSTPNPNPPSAAASSTPGRKMDDFRPTTPGHSPGVGHSIEN 111

[Close]

BLAST of Pay0005760.1 vs. ExPASy TrEMBL
Match: A0A059AMU0 (Uncharacterized protein OS=Eucalyptus grandis OX=71139 GN=EUGRSUZ_I00950 PE=3 SV=1)

HSP 1 Score: 67.8 bits (164), Expect = 3.2e-08
Identity = 49/127 (38.58%), Postives = 68/127 (53.54%), Query Frame = 0


Query: 1   MASTKLSFAFLFISLLILCHLIDPAFSRPLTTHTDHQ--------QLSNTLPTNPH---- 60
           MA  ++  AFLF+ L+  C  +    +R L   +  Q         ++  L   P     
Sbjct: 1   MAQNRVLVAFLFL-LVAFCLKLRSTQARQLKLTSQEQNPFPNELRHVNKLLGKEPRKTIA 60

Query: 61  ---FQFHGHTVHEGKASNNDAVSTPNPNPPTAAAGST-----PGRKMDDFRPTTPGHSPG 108
                + G T++E  A+N DA S+P P+PPTA  G+T     PGR +DDFRPT PGHSPG
Sbjct: 61  EQSKNWRGETLNE--ATNTDASSSPPPSPPTAMVGATTPPPSPGRSLDDFRPTAPGHSPG 120

[Close]

BLAST of Pay0005760.1 vs. ExPASy TrEMBL
Match: A0A059BZ06 (Uncharacterized protein OS=Eucalyptus grandis OX=71139 GN=EUGRSUZ_F04318 PE=3 SV=1)

HSP 1 Score: 59.3 bits (142), Expect = 1.1e-05
Identity = 45/127 (35.43%), Postives = 59/127 (46.46%), Query Frame = 0


Query: 1   MASTKLSFAFLFISLLILCHLIDPAFSRPLTTHTDHQQLSNTLPTNPH------------ 60
           MA  K+ +AF F+ L +   L      +   T    +   N LP N H            
Sbjct: 1   MAPNKVLYAFAFLLLALSLELQSTQARQLKLTVQKQKSFPNKLP-NVHKLLEKEPRKTIA 60

Query: 61  ---FQFHGHTVHEGKASNNDAVSTPNPNPPTAAAGST-----PGRKMDDFRPTTPGHSPG 108
                 HG  ++  KA+N D  +TP P PP     +T     P R +DDFRPT PGHSPG
Sbjct: 61  EQSKNLHGEILN--KATNTDVSTTPAPPPPRTMVAATTPPPSPERSLDDFRPTEPGHSPG 120

[Close]

BLAST of Pay0005760.1 vs. ExPASy TrEMBL
Match: A0A4D6LRW0 (Uncharacterized protein OS=Vigna unguiculata OX=3917 GN=DEO72_LG4g2282 PE=3 SV=1)

HSP 1 Score: 59.3 bits (142), Expect = 1.1e-05
Identity = 41/108 (37.96%), Postives = 56/108 (51.85%), Query Frame = 0


Query: 1   MASTKLSFAFLFISLLILCHLIDPAFSRPL-TTHTDHQQLSNTLPTNPHFQFHGHTVHEG 60
           MA  KL+   + ++L+IL   ++    R L    T   Q+   +PT              
Sbjct: 1   MAQKKLTVCLMLVALVILLQGLESIEGRLLKLDETTEHQMQERIPTT------------N 60

Query: 61  KASNNDAVSTPNPNPPTAAAGSTPGRKMDDFRPTTPGHSPGVGHSIKN 108
            A+ +  VS   P PP+AAA   PGR +D+FRPT PGHSPGVGHS+ N
Sbjct: 61  VAAFDTDVSVSPPTPPSAAA---PGRDVDNFRPTAPGHSPGVGHSVHN 93

[Close]

BLAST of Pay0005760.1 vs. NCBI nr
Match: TYK12897.1 (hypothetical protein E5676_scaffold255G004910 [Cucumis melo var. makuwa])

HSP 1 Score: 219.5 bits (558), Expect = 1.3e-53
Identity = 107/107 (100.00%), Postives = 107/107 (100.00%), Query Frame = 0


Query: 1   MASTKLSFAFLFISLLILCHLIDPAFSRPLTTHTDHQQLSNTLPTNPHFQFHGHTVHEGK 60
           MASTKLSFAFLFISLLILCHLIDPAFSRPLTTHTDHQQLSNTLPTNPHFQFHGHTVHEGK
Sbjct: 1   MASTKLSFAFLFISLLILCHLIDPAFSRPLTTHTDHQQLSNTLPTNPHFQFHGHTVHEGK 60

Query: 61  ASNNDAVSTPNPNPPTAAAGSTPGRKMDDFRPTTPGHSPGVGHSIKN 108
           ASNNDAVSTPNPNPPTAAAGSTPGRKMDDFRPTTPGHSPGVGHSIKN
Sbjct: 61  ASNNDAVSTPNPNPPTAAAGSTPGRKMDDFRPTTPGHSPGVGHSIKN 107

[Close]

BLAST of Pay0005760.1 vs. NCBI nr
Match: KGN48516.1 (hypothetical protein Csa_002724 [Cucumis sativus])

HSP 1 Score: 195.7 bits (496), Expect = 2.1e-46
Identity = 95/107 (88.79%), Postives = 101/107 (94.39%), Query Frame = 0


Query: 1   MASTKLSFAFLFISLLILCHLIDPAFSRPLTTHTDHQQLSNTLPTNPHFQFHGHTVHEGK 60
           MA TKLSFAFLFISLLILCHL+DPAFSRPLTTHT HQQLS+TLP NPHFQ HG T+HEGK
Sbjct: 5   MAPTKLSFAFLFISLLILCHLVDPAFSRPLTTHTIHQQLSDTLPKNPHFQLHGQTLHEGK 64

Query: 61  ASNNDAVSTPNPNPPTAAAGSTPGRKMDDFRPTTPGHSPGVGHSIKN 108
           ASN+DAVSTPNPNPP+AAA STPGRKMDDFRPTTPGHSPGVGHSI+N
Sbjct: 65  ASNDDAVSTPNPNPPSAAASSTPGRKMDDFRPTTPGHSPGVGHSIEN 111

[Close]

BLAST of Pay0005760.1 vs. NCBI nr
Match: KAG7027066.1 (Precursor of CEP3, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 129.4 bits (324), Expect = 1.8e-26
Identity = 73/107 (68.22%), Postives = 81/107 (75.70%), Query Frame = 0


Query: 1   MASTKLSFAFLFISLLILCHLIDPAFSRPLTTHTDHQQLSNTLPTNPHFQFHGHTVHEGK 60
           M  T LS AFLFI+LLI  H ID A SRPL THT+H QLS       HFQFHG +V EGK
Sbjct: 1   MLPTNLSLAFLFIALLIFSHFIDSASSRPLKTHTNH-QLSARSAKEAHFQFHGQSVAEGK 60

Query: 61  ASNNDAVSTPNPNPPTAAAGSTPGRKMDDFRPTTPGHSPGVGHSIKN 108
            ++  AVST  P+PPT AAGS+PGRKMDDFRPTTPGHSPGVGHSI+N
Sbjct: 61  GTDG-AVST--PSPPTTAAGSSPGRKMDDFRPTTPGHSPGVGHSIQN 103

[Close]

BLAST of Pay0005760.1 vs. NCBI nr
Match: KAG6595043.1 (Precursor of CEP3, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 129.4 bits (324), Expect = 1.8e-26
Identity = 73/107 (68.22%), Postives = 81/107 (75.70%), Query Frame = 0


Query: 1   MASTKLSFAFLFISLLILCHLIDPAFSRPLTTHTDHQQLSNTLPTNPHFQFHGHTVHEGK 60
           M  T LS AFLFI+LLI  H ID A SRPL THT+H QLS       HFQFHG +V EGK
Sbjct: 1   MPPTNLSLAFLFIALLIFSHFIDSASSRPLKTHTNH-QLSARSAKEAHFQFHGQSVAEGK 60

Query: 61  ASNNDAVSTPNPNPPTAAAGSTPGRKMDDFRPTTPGHSPGVGHSIKN 108
            ++  AVST  P+PPT AAGS+PGRKMDDFRPTTPGHSPGVGHSI+N
Sbjct: 61  GTDG-AVST--PSPPTTAAGSSPGRKMDDFRPTTPGHSPGVGHSIQN 103

[Close]

BLAST of Pay0005760.1 vs. NCBI nr
Match: KAG6604187.1 (hypothetical protein SDJN03_04796, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 117.1 bits (292), Expect = 9.4e-23
Identity = 66/108 (61.11%), Postives = 77/108 (71.30%), Query Frame = 0


Query: 1   MASTKLSFAFLFISLLILCHLIDPAFSRPLTTHTDHQQLSNTLPTNPHFQFHGHTVHEGK 60
           MA TKLSFAFLF +L++LC++ +   SRPL T T+H QL      + HFQFHG +V EG 
Sbjct: 1   MAPTKLSFAFLFTALIVLCYVTESVLSRPLKTDTNH-QLFERPAKDGHFQFHGESVEEGN 60

Query: 61  ASNNDAVSTPNPNPPT-AAAGSTPGRKMDDFRPTTPGHSPGVGHSIKN 108
                   T NPNP T AAA S+PGRKMDDFRPTTPGHSPGVGHSI+N
Sbjct: 61  -------GTTNPNPLTAAAAASSPGRKMDDFRPTTPGHSPGVGHSIQN 100

[Close]

BLAST of Pay0005760.1 vs. TAIR 10
Match: AT3G50610.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G66816.1); Has 125 Blast hits to 60 proteins in 16 species: Archae - 0; Bacteria - 2; Metazoa - 10; Fungi - 4; Plants - 97; Viruses - 0; Other Eukaryotes - 12 (source: NCBI BLink). )

HSP 1 Score: 48.5 bits (114), Expect = 3.8e-06
Identity = 21/31 (67.74%), Postives = 27/31 (87.10%), Query Frame = 0


Query: 80  GSTPG---RKMDDFRPTTPGHSPGVGHSIKN 108
           G++PG   +K DDF+PTTPGHSPGVGH++KN
Sbjct: 194 GNSPGMGHKKGDDFKPTTPGHSPGVGHAVKN 224

[Close]

BLAST of Pay0005760.1 vs. TAIR 10
Match: AT5G66815.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: root; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 48.5 bits (114), Expect = 3.8e-06
Identity = 22/40 (55.00%), Postives = 29/40 (72.50%), Query Frame = 0


Query: 68  STPNPNPPTAAAGSTPGRKMDDFRPTTPGHSPGVGHSIKN 108
           S P P PP + +G   G+  +DFRPTTPGHSPG+GHS+ +
Sbjct: 68  SPPPPPPPPSQSG---GKDAEDFRPTTPGHSPGIGHSLSH 104

[Close]

BLAST of Pay0005760.1 vs. TAIR 10
Match: AT2G23440.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: root; Has 25 Blast hits to 25 proteins in 6 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 25; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 46.2 bits (108), Expect = 1.9e-05
Identity = 21/40 (52.50%), Postives = 26/40 (65.00%), Query Frame = 0


Query: 68  STPNPNPPTAAAGSTPGRKMDDFRPTTPGHSPGVGHSIKN 108
           S  + +PPT    S P   +D FRPT PGHSPG+GHS+ N
Sbjct: 43  SVLSSSPPTEPLESPPSHGVDTFRPTEPGHSPGIGHSVHN 82

[Close]

BLAST of Pay0005760.1 vs. TAIR 10
Match: AT5G66816.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G50610.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 45.1 bits (105), Expect = 4.2e-05
Identity = 18/24 (75.00%), Postives = 20/24 (83.33%), Query Frame = 0


Query: 84  GRKMDDFRPTTPGHSPGVGHSIKN 108
           G   DDF PTTPGHSPGVGH++KN
Sbjct: 73  GGYKDDFEPTTPGHSPGVGHAVKN 96

The following BLAST results are available for this feature:

BLAST of Pay0005760.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q058G9	5.4e-05	55.00	Precursor of CEP5 OS=Arabidopsis thaliana OX=3702 GN=CEP5 PE=1 SV=1	[more]
A0A1I9LMX5	5.4e-05	67.74	Precursor of CEP9 OS=Arabidopsis thaliana OX=3702 GN=CEP9 PE=1 SV=1	[more]
O80460	2.7e-04	52.50	Precursor of CEP3 OS=Arabidopsis thaliana OX=3702 GN=CEP3 PE=1 SV=1	[more]
B3H5A9	6.0e-04	75.00	Precursor of CEP6 OS=Arabidopsis thaliana OX=3702 GN=CEP6 PE=1 SV=1	[more]

BLAST of Pay0005760.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3CLS2	6.5e-54	100.00	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A0A0KLC0	1.0e-46	88.79	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G490800 PE=3 SV=1	[more]
A0A059AMU0	3.2e-08	38.58	Uncharacterized protein OS=Eucalyptus grandis OX=71139 GN=EUGRSUZ_I00950 PE=3 SV...	[more]
A0A059BZ06	1.1e-05	35.43	Uncharacterized protein OS=Eucalyptus grandis OX=71139 GN=EUGRSUZ_F04318 PE=3 SV...	[more]
A0A4D6LRW0	1.1e-05	37.96	Uncharacterized protein OS=Vigna unguiculata OX=3917 GN=DEO72_LG4g2282 PE=3 SV=1	[more]

BLAST of Pay0005760.1 vs. NCBI nr


Match Name	E-value	Identity	Description
TYK12897.1	1.3e-53	100.00	hypothetical protein E5676_scaffold255G004910 [Cucumis melo var. makuwa]	[more]
KGN48516.1	2.1e-46	88.79	hypothetical protein Csa_002724 [Cucumis sativus]	[more]
KAG7027066.1	1.8e-26	68.22	Precursor of CEP3, partial [Cucurbita argyrosperma subsp. argyrosperma]	[more]
KAG6595043.1	1.8e-26	68.22	Precursor of CEP3, partial [Cucurbita argyrosperma subsp. sororia]	[more]
KAG6604187.1	9.4e-23	61.11	hypothetical protein SDJN03_04796, partial [Cucurbita argyrosperma subsp. sorori...	[more]

BLAST of Pay0005760.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G50610.1	3.8e-06	67.74	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT5G66815.1	3.8e-06	55.00	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT2G23440.1	1.9e-05	52.50	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT5G66816.1	4.2e-05	75.00	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Payzawat) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 34..49
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 34..107
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 61..75
None	No IPR available	PANTHER	PTHR33348:SF28	PRECURSOR OF CEP7	coord: 1..107
IPR033250	C-terminally encoded peptide	PANTHER	PTHR33348	PRECURSOR OF CEP5	coord: 1..107

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Pay0005760	Pay0005760	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Pay0005760.1-exon	Pay0005760.1-exon-Contig00104_ERROPOS3598216:49632..49955	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Pay0005760.1-cds	Pay0005760.1-cds-Contig00104_ERROPOS3598216:49632..49955	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Pay0005760.1	Pay0005760.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0048364	root development
biological_process	GO:1902025	nitrate import
biological_process	GO:1901371	regulation of leaf morphogenesis
biological_process	GO:2000280	regulation of root development
biological_process	GO:0007165	signal transduction
cellular_component	GO:0005576	extracellular region
molecular_function	GO:0005179	hormone activity