Pay0004812.1 (mRNA) Melon (Payzawat) v1

Overview


Name	Pay0004812.1
Type	mRNA
Organism	Cucumis melo L. var. inodorus cv. Payzawat (Melon (Payzawat) v1)
Description	RING-CH-type domain-containing protein
Location	chr03: 3023217 .. 3026558 (-)
Sequence length	1484
RNA-Seq Expression	Pay0004812.1
Synteny	Pay0004812.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATTTCTTTCTTTTGTAAACAATTTGTGATGTAATTTATGTGTCAAGAAAGATTTATGTTTCCCTTCCAACAATGATTTGATGATCACGTTTTCTACTTTTTCTTTTTGAGTGAAAAAATAAAAAGAAATAAAGAAAAGGAAAAAGAAGGAGTTGAATGATGCTCTCTGCATTATGCAGTCCAAAAATTGTCTCCAAAATCTTTCGTCGTCTTCTTCCTCTCTGCAACAACTCTGTTCTTTGCTGCACATCGCCACTGACACCCCAACAAAGCCGCTGAAACAGGGGACACCCACCACTTTTTCTTCTTCTACTTCTCACTCCATTACTCATTAATCATCACACCCTAAATCAAGTTTCTTTCTTCATGGGTCTCCTCTCTCTCTCCCCCCATTCTTCCTTTTCGCCTCACATACCCATTACATGAGGATTCTCTTTTTGGGTCTTTGCGATGACGACCGTCCAAGCTTCCCACGTTGTCGCAATGGAGGTAGAACAACACCAACAACACCCTCGCACTGACTCCGATGAAGTGCGGCGGTGTTCGGTCCACTCCAGGGCTGACATTCTGGAGGAAGAGGGGGTGGCGGTGGCGGTGGCGGCGGCGGCGGAGAAAAGAAGGGGATCCTCTGTGTCGGAGTGCTCTGTTGAGATGGATCTCGAATGTGGGTTGGCTGAGATTAAGGTACATTTGGCGAAAATCGAGAGGGATTGCAGGATTTGCCATCTGAGTTTGGATGCTTCTAATCATGAATCTGGAATTCCTTTTGAGTTGGGTTGTTCTTGTAAAGATGATTTGGCTGCTGCTCATAAGCACTGTGCTGAGGCTTGGTTCAAGATTAAGGGCGACATGTAAGTTTTTTAAAATTGAATAACACCTAATGTTTCTTGCTTTCAAGTTTCGCTTCTTGTCTTCATTTACTTTTCAATTCATTGGATATAATGATTGCCACTATAAACATGCCTGGAATCCGGAGTACCAACCTTGTTTTCTTGATTTAATCTTGTAGTTCAAATTTCCTTATTCCTCATGGTGTTTTAGTTTTTATTTTAGTGGTATTTTTCTCTTTTCTGACTACTCTTGAAGTTTGTCTTCTACTTAAAAAGTTGTGGGCATGTGGTTGACTTCTGTTACTCTTGGTGTTTTAGTAATGTTAAAGAATGTGGCTTCTATTTGTGTTTGGCCGTGTCAAGATAGCCTTCTTTGACTAAAAAGGACTAATTCCTGACCTTGTGTTTTCAAAACAGCTTAATCCAAATGCTAAAGAATTGAGACTATGTAGTCATCTTTATTTTTGCTTCTGCCTTGTGGAAATAGTGGTGCCATTATAAATCCATCAAGCCTTTTATAGAATCCATGTATTCGTTTCCTGTTAAAGATCAAAGCCAAAACGCAATGTTTTTCTTTGTCAAAACGAAGAGAAGTTGGATTTTGCATTGGACGATATGAGACCGAGATGGCATTTGATTTAGGAGAGAACTGCTCTCGGATTGGAGGTGTTTTTTGATGTAGAACTCTTGCCTTCGTCTTGTAGAAAAGGCTCATTCCTTTAGCCTATAATTTGCTTGCTTTAGTCTGATGTATTATTGATTAGAGCACGTTTCTGCTGAGTTCAAATGTTTGAATATTCTTTCTTAGCATGTTGTGTCTTTGTTTTTGCCTTTCTGGTCAGCTGCAGTGTGAAGTTTGAAACAATGGAGAAAATATTCATAACTTTTGCTACATATTCTTTATTACTTCATTGCATGATGTTGGTATCTACAAAAATATATGGAATCAACATTTATTCCTAAAAAAGACCAATCAGTGAGATTCTTTATTCCTTGTTAACCATTCCTTTATCAGTTCACACTGTCCTACAGAAGATGTTGCGAAGATTAGTACATATATTATTTATGATACAATATAGATTGGTTTTGTTTTGAGTTTTGAACATCTTTCTTTGAGGTTTAACCTATATTTACATTTTCACAAGTTCCGTGATCGGCATAGCTATCAATATTCGTATCATCCTTTGTTCAGAATGTATTTAAACTTGTATGGACAAAGTTAGAGCTTCAGTCTGAGGTTGATTGTTATTTCATTTCACCACTCTCAAATCACCATTCAAGACTGTGAAGCTATTTTGTCTGTCGAATACTTCACGGTATCAAACATTCATCTCCCATAGAACCTAGGAAACACATTTAAATTTATAGATAAGAGATACAATATTTGAACATGGTTATTTCCTCATTCATTATACTGTAACCTGAATTAAGCATCGGTATCTGAAACCTCTTTTCATTGTCATATTTGTTGATTGATTAAAGCTTATTACATACAGATGACGGTCAAAGGGTCTGTAGACTGTAAGAAGCCAAAAAACTATCTTCACTATATCTTCTGCATAGGTTGAACATATTTTTCCCATGATGAATCTATGAGCGTATTGAAAGAATTGAATTGTAATAGTCGGTCTGTGAAGAACTTTATTGCGTTTGACCCTGCTAGCAAACATATATAGTTTGGCCAGGAAAACTTTTCACTATTAGAGAGCGTTCTATAAAACTTGCTTGTGATTCATGTTGTTCTTTTAGCTGACTTTGGTGTTTGAAGTAATTTGAAAAGTTATGTTATCTGGAATAAAAGACGGGGGGAAAATCAAATACTGTTCAAACTTGGAAAAGCTCATGTACCTTGCACTGACCCATGTGTAATTTGTTACAGCACATGTGAGATCTGTGGATCAATTGCACACAATGTTACTGGTACTTACGAAGCCGATTCAACAGAGCAACGCAATGAACCAAACGAAGCAACAACAGCAACTGCTACAGCTGCCATAGTGATGCCACCACACTCTACAGAGGCTCGGAACTTCTGGCAAGGCCACAGGTTCCTGAATTTCTTACTCGCCTGCATGGTTTTCGCCTTTGTCATATCATGGTTATTTCACTTCAAAATACCCTCATAATTATGAAAAAGAAAACTATATTCGAAAAGTAGCATCAAAAGATTGTCGAAAATCTTCATCGTGCTCTCTTCATTCTGCAATGCGGCCACTGAAACAAACTCGAAAGATCAACTATATTGCACGGTTACAGGCTTGGGATTGTGATTACAAATATTCTGTTAATATATATTAGTGTTAGAGAACCTTGGAGGAAGAGTTTGGCCTTTGTAACAAGTAAGATGTATAATGAAATTGTTTGTAAGTTTATATTGTATTATTGGGCTCAGCCTAGCTGGATTGGCCATCTCAATTGTTCGTGCTGTTTGTCTCTTGTCGTTTCATTGTGGATAATTCTCTGTGGAGATTCCGACATGTAGTTCCTTCTATAACAACAAAATCGGATTTGGG

mRNA sequence

ATTTCTTTCTTTTGTAAACAATTTGTGATGTAATTTATGTGTCAAGAAAGATTTATGTTTCCCTTCCAACAATGATTTGATGATCACGTTTTCTACTTTTTCTTTTTGAGTGAAAAAATAAAAAGAAATAAAGAAAAGGAAAAAGAAGGAGTTGAATGATGCTCTCTGCATTATGCAGTCCAAAAATTGTCTCCAAAATCTTTCGTCGTCTTCTTCCTCTCTGCAACAACTCTGTTCTTTGCTGCACATCGCCACTGACACCCCAACAAAGCCGCTGAAACAGGGGACACCCACCACTTTTTCTTCTTCTACTTCTCACTCCATTACTCATTAATCATCACACCCTAAATCAAGTTTCTTTCTTCATGGGTCTCCTCTCTCTCTCCCCCCATTCTTCCTTTTCGCCTCACATACCCATTACATGAGGATTCTCTTTTTGGGTCTTTGCGATGACGACCGTCCAAGCTTCCCACGTTGTCGCAATGGAGGTAGAACAACACCAACAACACCCTCGCACTGACTCCGATGAAGTGCGGCGGTGTTCGGTCCACTCCAGGGCTGACATTCTGGAGGAAGAGGGGGTGGCGGTGGCGGTGGCGGCGGCGGCGGAGAAAAGAAGGGGATCCTCTGTGTCGGAGTGCTCTGTTGAGATGGATCTCGAATGTGGGTTGGCTGAGATTAAGGTACATTTGGCGAAAATCGAGAGGGATTGCAGGATTTGCCATCTGAGTTTGGATGCTTCTAATCATGAATCTGGAATTCCTTTTGAGTTGGGTTGTTCTTGTAAAGATGATTTGGCTGCTGCTCATAAGCACTGTGCTGAGGCTTGGTTCAAGATTAAGGGCGACATCACATGTGAGATCTGTGGATCAATTGCACACAATGTTACTGGTACTTACGAAGCCGATTCAACAGAGCAACGCAATGAACCAAACGAAGCAACAACAGCAACTGCTACAGCTGCCATAGTGATGCCACCACACTCTACAGAGGCTCGGAACTTCTGGCAAGGCCACAGGTTCCTGAATTTCTTACTCGCCTGCATGGTTTTCGCCTTTGTCATATCATGGTTATTTCACTTCAAAATACCCTCATAATTATGAAAAAGAAAACTATATTCGAAAAGTAGCATCAAAAGATTGTCGAAAATCTTCATCGTGCTCTCTTCATTCTGCAATGCGGCCACTGAAACAAACTCGAAAGATCAACTATATTGCACGGTTACAGGCTTGGGATTGTGATTACAAATATTCTGTTAATATATATTAGTGTTAGAGAACCTTGGAGGAAGAGTTTGGCCTTTGTAACAAGTAAGATGTATAATGAAATTGTTTGTAAGTTTATATTGTATTATTGGGCTCAGCCTAGCTGGATTGGCCATCTCAATTGTTCGTGCTGTTTGTCTCTTGTCGTTTCATTGTGGATAATTCTCTGTGGAGATTCCGACATGTAGTTCCTTCTATAACAACAAAATCGGATTTGGG

Coding sequence (CDS)

ATGACGACCGTCCAAGCTTCCCACGTTGTCGCAATGGAGGTAGAACAACACCAACAACACCCTCGCACTGACTCCGATGAAGTGCGGCGGTGTTCGGTCCACTCCAGGGCTGACATTCTGGAGGAAGAGGGGGTGGCGGTGGCGGTGGCGGCGGCGGCGGAGAAAAGAAGGGGATCCTCTGTGTCGGAGTGCTCTGTTGAGATGGATCTCGAATGTGGGTTGGCTGAGATTAAGGTACATTTGGCGAAAATCGAGAGGGATTGCAGGATTTGCCATCTGAGTTTGGATGCTTCTAATCATGAATCTGGAATTCCTTTTGAGTTGGGTTGTTCTTGTAAAGATGATTTGGCTGCTGCTCATAAGCACTGTGCTGAGGCTTGGTTCAAGATTAAGGGCGACATCACATGTGAGATCTGTGGATCAATTGCACACAATGTTACTGGTACTTACGAAGCCGATTCAACAGAGCAACGCAATGAACCAAACGAAGCAACAACAGCAACTGCTACAGCTGCCATAGTGATGCCACCACACTCTACAGAGGCTCGGAACTTCTGGCAAGGCCACAGGTTCCTGAATTTCTTACTCGCCTGCATGGTTTTCGCCTTTGTCATATCATGGTTATTTCACTTCAAAATACCCTCATAA

Protein sequence

MTTVQASHVVAMEVEQHQQHPRTDSDEVRRCSVHSRADILEEEGVAVAVAAAAEKRRGSSVSECSVEMDLECGLAEIKVHLAKIERDCRICHLSLDASNHESGIPFELGCSCKDDLAAAHKHCAEAWFKIKGDITCEICGSIAHNVTGTYEADSTEQRNEPNEATTATATAAIVMPPHSTEARNFWQGHRFLNFLLACMVFAFVISWLFHFKIPS

Homology

[Close]

BLAST of Pay0004812.1 vs. ExPASy TrEMBL
Match: A0A1S3B429 (uncharacterized protein LOC103485546 OS=Cucumis melo OX=3656 GN=LOC103485546 PE=4 SV=1)

HSP 1 Score: 433.0 bits (1112), Expect = 7.6e-118
Identity = 214/215 (99.53%), Postives = 214/215 (99.53%), Query Frame = 0


Query: 1   MTTVQASHVVAMEVEQHQQHPRTDSDEVRRCSVHSRADILEEEGVAVAVAAAAEKRRGSS 60
           MTTVQASHVVAMEVEQHQQHPRTDSDEVRRCSVHSRADILEEEGVAVAVAAAAEKRRGSS
Sbjct: 1   MTTVQASHVVAMEVEQHQQHPRTDSDEVRRCSVHSRADILEEEGVAVAVAAAAEKRRGSS 60

Query: 61  VSECSVEMDLECGLAEIKVHLAKIERDCRICHLSLDASNHESGIPFELGCSCKDDLAAAH 120
           VSECSVEMDLECGLAEIKVHLAKIERDCRICHLSLDASNHESGIP ELGCSCKDDLAAAH
Sbjct: 61  VSECSVEMDLECGLAEIKVHLAKIERDCRICHLSLDASNHESGIPIELGCSCKDDLAAAH 120

Query: 121 KHCAEAWFKIKGDITCEICGSIAHNVTGTYEADSTEQRNEPNEATTATATAAIVMPPHST 180
           KHCAEAWFKIKGDITCEICGSIAHNVTGTYEADSTEQRNEPNEATTATATAAIVMPPHST
Sbjct: 121 KHCAEAWFKIKGDITCEICGSIAHNVTGTYEADSTEQRNEPNEATTATATAAIVMPPHST 180

Query: 181 EARNFWQGHRFLNFLLACMVFAFVISWLFHFKIPS 216
           EARNFWQGHRFLNFLLACMVFAFVISWLFHFKIPS
Sbjct: 181 EARNFWQGHRFLNFLLACMVFAFVISWLFHFKIPS 215

[Close]

BLAST of Pay0004812.1 vs. ExPASy TrEMBL
Match: A0A0A0K8G0 (RING-CH-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G009420 PE=4 SV=1)

HSP 1 Score: 422.2 bits (1084), Expect = 1.3e-114
Identity = 207/215 (96.28%), Postives = 211/215 (98.14%), Query Frame = 0


Query: 1   MTTVQASHVVAMEVEQHQQHPRTDSDEVRRCSVHSRADILEEEGVAVAVAAAAEKRRGSS 60
           MTTVQASHVVAM+VEQHQQ PRTDSD+VRRCSVHSRADILEE+GVAVA AAA EKRRGSS
Sbjct: 1   MTTVQASHVVAMDVEQHQQRPRTDSDDVRRCSVHSRADILEEDGVAVAAAAAVEKRRGSS 60

Query: 61  VSECSVEMDLECGLAEIKVHLAKIERDCRICHLSLDASNHESGIPFELGCSCKDDLAAAH 120
           VSECSVEMDLECGLAEIKVHLAKIE+DCRICHLSLDASNHESGIP ELGCSCKDDLAAAH
Sbjct: 61  VSECSVEMDLECGLAEIKVHLAKIEKDCRICHLSLDASNHESGIPIELGCSCKDDLAAAH 120

Query: 121 KHCAEAWFKIKGDITCEICGSIAHNVTGTYEADSTEQRNEPNEATTATATAAIVMPPHST 180
           KHCAEAWFKIKGDITCEICGSIAHNVTGTYEADSTEQRNEPNEATTATATAAIVMPPHST
Sbjct: 121 KHCAEAWFKIKGDITCEICGSIAHNVTGTYEADSTEQRNEPNEATTATATAAIVMPPHST 180

Query: 181 EARNFWQGHRFLNFLLACMVFAFVISWLFHFKIPS 216
           EARNFWQGHRFLNFLLACMVFAFVISWLFHFKIPS
Sbjct: 181 EARNFWQGHRFLNFLLACMVFAFVISWLFHFKIPS 215

[Close]

BLAST of Pay0004812.1 vs. ExPASy TrEMBL
Match: A0A5A7TJA4 (E3 ubiquitin-protein ligase MARCH8 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold205G001630 PE=4 SV=1)

HSP 1 Score: 379.8 bits (974), Expect = 7.6e-102
Identity = 189/207 (91.30%), Postives = 195/207 (94.20%), Query Frame = 0


Query: 1   MTTVQASHVVAMEVEQHQQHPRTDSDEVRRCSVHSRADILEEEGVAVAVAAAAEKRRGSS 60
           MTTVQASHVVAMEVEQHQQHPRTDSDEVRRCSVHSRADILEEEGVAVAVAAAAEKRRGSS
Sbjct: 1   MTTVQASHVVAMEVEQHQQHPRTDSDEVRRCSVHSRADILEEEGVAVAVAAAAEKRRGSS 60

Query: 61  VSECSVEMDLECGLAEIKVHLAKIERDCRICHLSLDASNHESGIPFELGCSCKDDLAAAH 120
           VSECSVEMDLECGLAEIKVHLAKIERDCRICHLSLDASNHESGIP ELGCSCKDDLAAAH
Sbjct: 61  VSECSVEMDLECGLAEIKVHLAKIERDCRICHLSLDASNHESGIPIELGCSCKDDLAAAH 120

Query: 121 KHCAEAWFKIKGDITCEICGSIAHNVTGTYEADSTEQRNEPNEATTATATAAIVMPPHST 180
           KHCAEAWFKIKGDITCEICGSIAHNVTGTYEADSTEQRNEPNEATTATATAAIVMPPHST
Sbjct: 121 KHCAEAWFKIKGDITCEICGSIAHNVTGTYEADSTEQRNEPNEATTATATAAIVMPPHST 180

Query: 181 EARNFWQGHRFLNFLLACMVFAFVISW 208
           EARNFWQGH      ++ +    ++S+
Sbjct: 181 EARNFWQGHSLAGLAISIVRAVCLLSF 207

[Close]

BLAST of Pay0004812.1 vs. ExPASy TrEMBL
Match: A0A6J1FEB0 (uncharacterized protein LOC111444740 OS=Cucurbita moschata OX=3662 GN=LOC111444740 PE=4 SV=1)

HSP 1 Score: 342.8 bits (878), Expect = 1.0e-90
Identity = 176/224 (78.57%), Postives = 188/224 (83.93%), Query Frame = 0


Query: 1   MTTVQASHVVAMEVEQHQQHPRTD---------SDEVRRCSVHSRADILEEEGVAVAVAA 60
           MTT Q SHVVAMEV + +Q  RT          S++VR+CS  SRA+I         V A
Sbjct: 1   MTTTQNSHVVAMEVGEVEQPRRTSAAGADALLASNDVRQCSGQSRAEI---------VGA 60

Query: 61  AAEKRRGSSVSECSVEMDLECGLAEIKVHLAKIERDCRICHLSLDASNHESGIPFELGCS 120
           AAEKRR SSVSECSVEMDLECGLAEIK+HL K+ERDCRICHLSLDASN ESGIP ELGCS
Sbjct: 61  AAEKRRESSVSECSVEMDLECGLAEIKLHLTKMERDCRICHLSLDASNQESGIPIELGCS 120

Query: 121 CKDDLAAAHKHCAEAWFKIKGDITCEICGSIAHNVTGTYEADSTEQRNEPNEATTATATA 180
           CKDDLAAAHKHCAEAWFKIKGDITCEICGSIAHNVT TYE DSTEQRN+ N+ATTATA A
Sbjct: 121 CKDDLAAAHKHCAEAWFKIKGDITCEICGSIAHNVTATYEPDSTEQRNDSNDATTATAAA 180

Query: 181 AIVMPPHSTEARNFWQGHRFLNFLLACMVFAFVISWLFHFKIPS 216
           A+V+PPHSTEARNFWQGHRFLNFLLACMVFAFVISWLFHFKIPS
Sbjct: 181 AVVVPPHSTEARNFWQGHRFLNFLLACMVFAFVISWLFHFKIPS 215

[Close]

BLAST of Pay0004812.1 vs. ExPASy TrEMBL
Match: A0A6J1JQX9 (uncharacterized protein LOC111487535 OS=Cucurbita maxima OX=3661 GN=LOC111487535 PE=4 SV=1)

HSP 1 Score: 340.9 bits (873), Expect = 3.9e-90
Identity = 174/224 (77.68%), Postives = 187/224 (83.48%), Query Frame = 0


Query: 1   MTTVQASHVVAMEVEQHQQHPR-----TD----SDEVRRCSVHSRADILEEEGVAVAVAA 60
           M+T+Q +HVVAME EQ ++  R     TD    SD+VRRCSV S A+I         V A
Sbjct: 1   MSTIQNTHVVAMEEEQEERPSRVSTAGTDASPASDDVRRCSVQSSAEI---------VGA 60

Query: 61  AAEKRRGSSVSECSVEMDLECGLAEIKVHLAKIERDCRICHLSLDASNHESGIPFELGCS 120
           A EKRRGSSVSECSVEMDLECGL EIKVHLAK+ERDCRICHLSLDA+NHESGIP ELGCS
Sbjct: 61  AVEKRRGSSVSECSVEMDLECGLGEIKVHLAKMERDCRICHLSLDATNHESGIPIELGCS 120

Query: 121 CKDDLAAAHKHCAEAWFKIKGDITCEICGSIAHNVTGTYEADSTEQRNEPNEATTATATA 180
           CKDDLAAAHKHCAEAWFK+KGDITCEICGSIAHNVT T EADSTEQ NE N+ TTAT  A
Sbjct: 121 CKDDLAAAHKHCAEAWFKVKGDITCEICGSIAHNVTSTCEADSTEQCNESNDGTTATTAA 180

Query: 181 AIVMPPHSTEARNFWQGHRFLNFLLACMVFAFVISWLFHFKIPS 216
           A+V+PPHSTE RNFWQGHRFLNFLLACMVFAFVISWLFHFKIPS
Sbjct: 181 AVVVPPHSTETRNFWQGHRFLNFLLACMVFAFVISWLFHFKIPS 215

[Close]

BLAST of Pay0004812.1 vs. NCBI nr
Match: XP_008441426.1 (PREDICTED: uncharacterized protein LOC103485546 [Cucumis melo])

HSP 1 Score: 433.0 bits (1112), Expect = 1.6e-117
Identity = 214/215 (99.53%), Postives = 214/215 (99.53%), Query Frame = 0


Query: 1   MTTVQASHVVAMEVEQHQQHPRTDSDEVRRCSVHSRADILEEEGVAVAVAAAAEKRRGSS 60
           MTTVQASHVVAMEVEQHQQHPRTDSDEVRRCSVHSRADILEEEGVAVAVAAAAEKRRGSS
Sbjct: 1   MTTVQASHVVAMEVEQHQQHPRTDSDEVRRCSVHSRADILEEEGVAVAVAAAAEKRRGSS 60

Query: 61  VSECSVEMDLECGLAEIKVHLAKIERDCRICHLSLDASNHESGIPFELGCSCKDDLAAAH 120
           VSECSVEMDLECGLAEIKVHLAKIERDCRICHLSLDASNHESGIP ELGCSCKDDLAAAH
Sbjct: 61  VSECSVEMDLECGLAEIKVHLAKIERDCRICHLSLDASNHESGIPIELGCSCKDDLAAAH 120

Query: 121 KHCAEAWFKIKGDITCEICGSIAHNVTGTYEADSTEQRNEPNEATTATATAAIVMPPHST 180
           KHCAEAWFKIKGDITCEICGSIAHNVTGTYEADSTEQRNEPNEATTATATAAIVMPPHST
Sbjct: 121 KHCAEAWFKIKGDITCEICGSIAHNVTGTYEADSTEQRNEPNEATTATATAAIVMPPHST 180

Query: 181 EARNFWQGHRFLNFLLACMVFAFVISWLFHFKIPS 216
           EARNFWQGHRFLNFLLACMVFAFVISWLFHFKIPS
Sbjct: 181 EARNFWQGHRFLNFLLACMVFAFVISWLFHFKIPS 215

[Close]

BLAST of Pay0004812.1 vs. NCBI nr
Match: XP_004138437.1 (uncharacterized protein LOC101207404 [Cucumis sativus] >KGN45763.1 hypothetical protein Csa_004857 [Cucumis sativus])

HSP 1 Score: 422.2 bits (1084), Expect = 2.8e-114
Identity = 207/215 (96.28%), Postives = 211/215 (98.14%), Query Frame = 0


Query: 1   MTTVQASHVVAMEVEQHQQHPRTDSDEVRRCSVHSRADILEEEGVAVAVAAAAEKRRGSS 60
           MTTVQASHVVAM+VEQHQQ PRTDSD+VRRCSVHSRADILEE+GVAVA AAA EKRRGSS
Sbjct: 1   MTTVQASHVVAMDVEQHQQRPRTDSDDVRRCSVHSRADILEEDGVAVAAAAAVEKRRGSS 60

Query: 61  VSECSVEMDLECGLAEIKVHLAKIERDCRICHLSLDASNHESGIPFELGCSCKDDLAAAH 120
           VSECSVEMDLECGLAEIKVHLAKIE+DCRICHLSLDASNHESGIP ELGCSCKDDLAAAH
Sbjct: 61  VSECSVEMDLECGLAEIKVHLAKIEKDCRICHLSLDASNHESGIPIELGCSCKDDLAAAH 120

Query: 121 KHCAEAWFKIKGDITCEICGSIAHNVTGTYEADSTEQRNEPNEATTATATAAIVMPPHST 180
           KHCAEAWFKIKGDITCEICGSIAHNVTGTYEADSTEQRNEPNEATTATATAAIVMPPHST
Sbjct: 121 KHCAEAWFKIKGDITCEICGSIAHNVTGTYEADSTEQRNEPNEATTATATAAIVMPPHST 180

Query: 181 EARNFWQGHRFLNFLLACMVFAFVISWLFHFKIPS 216
           EARNFWQGHRFLNFLLACMVFAFVISWLFHFKIPS
Sbjct: 181 EARNFWQGHRFLNFLLACMVFAFVISWLFHFKIPS 215

[Close]

BLAST of Pay0004812.1 vs. NCBI nr
Match: KAA0041505.1 (E3 ubiquitin-protein ligase MARCH8 [Cucumis melo var. makuwa] >TYK24378.1 E3 ubiquitin-protein ligase MARCH8 [Cucumis melo var. makuwa])

HSP 1 Score: 379.8 bits (974), Expect = 1.6e-101
Identity = 189/207 (91.30%), Postives = 195/207 (94.20%), Query Frame = 0


Query: 1   MTTVQASHVVAMEVEQHQQHPRTDSDEVRRCSVHSRADILEEEGVAVAVAAAAEKRRGSS 60
           MTTVQASHVVAMEVEQHQQHPRTDSDEVRRCSVHSRADILEEEGVAVAVAAAAEKRRGSS
Sbjct: 1   MTTVQASHVVAMEVEQHQQHPRTDSDEVRRCSVHSRADILEEEGVAVAVAAAAEKRRGSS 60

Query: 61  VSECSVEMDLECGLAEIKVHLAKIERDCRICHLSLDASNHESGIPFELGCSCKDDLAAAH 120
           VSECSVEMDLECGLAEIKVHLAKIERDCRICHLSLDASNHESGIP ELGCSCKDDLAAAH
Sbjct: 61  VSECSVEMDLECGLAEIKVHLAKIERDCRICHLSLDASNHESGIPIELGCSCKDDLAAAH 120

Query: 121 KHCAEAWFKIKGDITCEICGSIAHNVTGTYEADSTEQRNEPNEATTATATAAIVMPPHST 180
           KHCAEAWFKIKGDITCEICGSIAHNVTGTYEADSTEQRNEPNEATTATATAAIVMPPHST
Sbjct: 121 KHCAEAWFKIKGDITCEICGSIAHNVTGTYEADSTEQRNEPNEATTATATAAIVMPPHST 180

Query: 181 EARNFWQGHRFLNFLLACMVFAFVISW 208
           EARNFWQGH      ++ +    ++S+
Sbjct: 181 EARNFWQGHSLAGLAISIVRAVCLLSF 207

[Close]

BLAST of Pay0004812.1 vs. NCBI nr
Match: XP_038884403.1 (uncharacterized protein LOC120075258 [Benincasa hispida])

HSP 1 Score: 355.9 bits (912), Expect = 2.4e-94
Identity = 188/229 (82.10%), Postives = 193/229 (84.28%), Query Frame = 0


Query: 1   MTTVQASHVVAMEVE----QHQQHPR------TD----SDEVRRCSVHSRADILEEEGVA 60
           MTT+Q SHV  M+VE    Q QQ PR      TD    SD+VRRCSV SRADI+EE    
Sbjct: 1   MTTIQNSHVGTMDVEQQQQQQQQRPRRVSAAATDSSPASDDVRRCSVQSRADIMEE---- 60

Query: 61  VAVAAAAEKRRGSSVSECSVEMDLECGLAEIKVHLAKIERDCRICHLSLDASNHESGIPF 120
                AAEKRRGSSVSECSVEMDLECGLAEIKVHLAKIERD RICHLSLDASNHESGIP 
Sbjct: 61  ----VAAEKRRGSSVSECSVEMDLECGLAEIKVHLAKIERDFRICHLSLDASNHESGIPI 120

Query: 121 ELGCSCKDDLAAAHKHCAEAWFKIKGDITCEICGSIAHNVTGTYEADSTEQRNEPNEATT 180
           ELGCSCKDDLAAAHK CAEAWFKIKGDITCEICGSIAHNVTGTYE DSTEQRNE NEATT
Sbjct: 121 ELGCSCKDDLAAAHKQCAEAWFKIKGDITCEICGSIAHNVTGTYEPDSTEQRNESNEATT 180

Query: 181 ATATAAIVMPPHSTEARNFWQGHRFLNFLLACMVFAFVISWLFHFKIPS 216
           AT TAA+VMP HSTEARNFWQGHRFLNFLLACMVFAFVISWLFHFKIPS
Sbjct: 181 ATTTAAVVMPLHSTEARNFWQGHRFLNFLLACMVFAFVISWLFHFKIPS 221

[Close]

BLAST of Pay0004812.1 vs. NCBI nr
Match: KAG6602635.1 (hypothetical protein SDJN03_07868, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 344.0 bits (881), Expect = 9.5e-91
Identity = 173/224 (77.23%), Postives = 188/224 (83.93%), Query Frame = 0


Query: 1   MTTVQASHVVAMEVEQHQQHPRTD---------SDEVRRCSVHSRADILEEEGVAVAVAA 60
           M+T++ +HVVAME E+ ++  R           SD+VRRCSV S A+I       V  AA
Sbjct: 1   MSTIEDTHVVAMEEEKEERPSRVSTAGTAASPASDDVRRCSVQSSAEI-------VGAAA 60

Query: 61  AAEKRRGSSVSECSVEMDLECGLAEIKVHLAKIERDCRICHLSLDASNHESGIPFELGCS 120
           A EKRRGSSVSECSVEMDLECGL EIKVHLAK+ERDCRICHLSLDA+NHESGIP ELGCS
Sbjct: 61  AVEKRRGSSVSECSVEMDLECGLGEIKVHLAKMERDCRICHLSLDATNHESGIPIELGCS 120

Query: 121 CKDDLAAAHKHCAEAWFKIKGDITCEICGSIAHNVTGTYEADSTEQRNEPNEATTATATA 180
           CKDDLAAAHKHCAEAWFK+KGDITCEICGSIAHNVTGT EADSTEQ NE N+ TTAT  A
Sbjct: 121 CKDDLAAAHKHCAEAWFKVKGDITCEICGSIAHNVTGTCEADSTEQCNESNDGTTATTVA 180

Query: 181 AIVMPPHSTEARNFWQGHRFLNFLLACMVFAFVISWLFHFKIPS 216
           A+V+PPHSTEARNFWQGHRFLNFLLACMVFAFVISWLFHFKIPS
Sbjct: 181 AVVVPPHSTEARNFWQGHRFLNFLLACMVFAFVISWLFHFKIPS 217

[Close]

BLAST of Pay0004812.1 vs. TAIR 10
Match: AT5G05830.1 (RING/FYVE/PHD zinc finger superfamily protein )

HSP 1 Score: 221.9 bits (564), Expect = 5.1e-58
Identity = 107/162 (66.05%), Postives = 123/162 (75.93%), Query Frame = 0


Query: 54  EKRRGSSVSECSVEMDLECGLAEIKVHLAKIERDCRICHLSLDASNHESGIPFELGCSCK 113
           ++ R S+ S CSVE+DLE GL E  VHL++ ERDCRICH+SLDA+N ESG+P ELGCSCK
Sbjct: 45  DEERRSNASVCSVEIDLELGLPEKVVHLSQSERDCRICHMSLDAANLESGVPIELGCSCK 104

Query: 114 DDLAAAHKHCAEAWFKIKGDITCEICGSIAHNVTGTYEADSTEQRNEPNEATTATATAAI 173
            DLAAAHKHCAE WFKIKG+  CE+CGSIA NV G+ E +S E RNE N     T   + 
Sbjct: 105 ADLAAAHKHCAETWFKIKGNKICEVCGSIAGNVVGSVEVESEESRNEANGVENLTLRTS- 164

Query: 174 VMPPHSTEARNFWQGHRFLNFLLACMVFAFVISWLFHFKIPS 216
              P   E R+FWQGHRFLNFLLACMVFAFVISWLFHF +PS
Sbjct: 165 --GPRLVEGRSFWQGHRFLNFLLACMVFAFVISWLFHFNVPS 203

[Close]

BLAST of Pay0004812.1 vs. TAIR 10
Match: AT5G01070.2 (RING/FYVE/PHD zinc finger superfamily protein )

HSP 1 Score: 138.7 bits (348), Expect = 5.7e-33
Identity = 68/133 (51.13%), Postives = 84/133 (63.16%), Query Frame = 0


Query: 85  ERDCRICHLSLDASNHESGIPFELGCSCKDDLAAAHKHCAEAWFKIKGDITCEICGSIAH 144
           E+DCRICHL L++S HE G P  LGCSCKDDL   HK CA+ WFKIKG+ TCEIC SIA 
Sbjct: 75  EKDCRICHLGLESSRHECGDPMVLGCSCKDDLGYVHKQCADTWFKIKGNKTCEICRSIAQ 134

Query: 145 NVTGTYEADST--EQRNEPNEATTATATAAIVMPPHSTEARNFWQGHRFLNFLLACMVFA 204
           N    ++ D+   +   E N           ++    ++ R   +G+RFLNFLL CMV A
Sbjct: 135 NF---FKVDNEIGQTTVETNVDDVEAGNTPTMVATSDSDDRRLCRGNRFLNFLLTCMVCA 194

Query: 205 FVISWLFHFKIPS 216
           FVISW FHF +PS
Sbjct: 195 FVISWFFHFNLPS 204

[Close]

BLAST of Pay0004812.1 vs. TAIR 10
Match: AT2G37950.1 (RING/FYVE/PHD zinc finger superfamily protein )

HSP 1 Score: 132.5 bits (332), Expect = 4.1e-31
Identity = 69/133 (51.88%), Postives = 81/133 (60.90%), Query Frame = 0


Query: 85  ERDCRICHLSLDASNHESGIPFELGCSCKDDLAAAHKHCAEAWFKIKGDITCEICGSIAH 144
           E+DCRICHL ++ S    G   ELGCSCKDDLA AH+ CAE WFKIKGD TCEIC S+A 
Sbjct: 81  EKDCRICHLGVETS---GGGAIELGCSCKDDLAVAHRQCAETWFKIKGDKTCEICQSVAR 140

Query: 145 NVTGTYE--ADSTEQRNEPNEATTATATAAIVMPPHSTEARNFWQGHRFLNFLLACMVFA 204
           NV G  E    + E+R   N   TA           +T   N WQ  R +N +LACMVF 
Sbjct: 141 NVGGANEMVGSTMEERELRNGEETAAGEGG-----GATVVENRWQPQRVVNLVLACMVFG 200

Query: 205 FVISWLFHFKIPS 216
           F ISW+FHF + S
Sbjct: 201 FFISWIFHFHVSS 205

[Close]

BLAST of Pay0004812.1 vs. TAIR 10
Match: AT5G59000.1 (RING/FYVE/PHD zinc finger superfamily protein )

HSP 1 Score: 126.7 bits (317), Expect = 2.2e-29
Identity = 70/159 (44.03%), Postives = 84/159 (52.83%), Query Frame = 0


Query: 86  RDCRICHLSLDASNHES-------------------------------GIPFELGCSCKD 145
           RDCRICHL L+ +                                   G+P +LGCSCK 
Sbjct: 79  RDCRICHLPLETNKEAEDEDEEEEDDSDDDEDEEDEEEEEEEEEEEYYGLPLQLGCSCKG 138

Query: 146 DLAAAHKHCAEAWFKIKGDITCEICGSIAHNVTGTYEADSTEQRNEPNEATTATATAAIV 205
           DL  AH  CAE WFKIKG++TCEICG++A NV G       EQ N  + A+T +  AA  
Sbjct: 139 DLGVAHSKCAETWFKIKGNMTCEICGAMALNVAG-------EQSNPESTASTHSQAAA-G 198

Query: 206 MPPHSTEARNFWQGHRFLNFLLACMVFAFVISWLFHFKI 214
                TE R  W G   +NFLLA MVFAFV+SWLFHFK+
Sbjct: 199 QSLTQTEPRGIWHGRPVMNFLLAAMVFAFVVSWLFHFKV 229

[Close]

BLAST of Pay0004812.1 vs. TAIR 10
Match: AT2G34200.1 (RING/FYVE/PHD zinc finger superfamily protein )

HSP 1 Score: 82.4 bits (202), Expect = 4.8e-16
Identity = 57/157 (36.31%), Postives = 79/157 (50.32%), Query Frame = 0


Query: 13  EVEQHQQHPRTDS---DEVRRCSVHSRADILEEEGVAVAVAAAAEKRRGSSVSECSVEMD 72
           +V++ QQ    DS    +V  CS +  A ++ EE VA  V A +     S +S+   +  
Sbjct: 31  DVKKPQQGKENDSRMAKDVVSCSSNISAHVVHEE-VADNVTAVSCNEAESDISKAKAKEF 90

Query: 73  LECGLAEIKVHLAKIERDCRICHLSLDASNHESGIP-------FELGCSCKDDLAAAHKH 132
               L+ +       ER CRICH   D S   SG          E+GC CK++L  AH H
Sbjct: 91  HTIDLSGVG------ERICRICHFGSDQSPEASGDDKSVSPELIEIGCKCKNELGLAHFH 150

Query: 133 CAEAWFKIKGDITCEICGSIAHNVTGTYEADSTEQRN 160
           CAEAWFK++G+  CEICG  A NVT     D + +R+
Sbjct: 151 CAEAWFKLRGNSVCEICGCTAKNVTVRLMEDWSGERD 180

The following BLAST results are available for this feature:

BLAST of Pay0004812.1 vs.


Match Name	E-value	Identity	Description

BLAST of Pay0004812.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3B429	7.6e-118	99.53	uncharacterized protein LOC103485546 OS=Cucumis melo OX=3656 GN=LOC103485546 PE=...	[more]
A0A0A0K8G0	1.3e-114	96.28	RING-CH-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G00942...	[more]
A0A5A7TJA4	7.6e-102	91.30	E3 ubiquitin-protein ligase MARCH8 OS=Cucumis melo var. makuwa OX=1194695 GN=E56...	[more]
A0A6J1FEB0	1.0e-90	78.57	uncharacterized protein LOC111444740 OS=Cucurbita moschata OX=3662 GN=LOC1114447...	[more]
A0A6J1JQX9	3.9e-90	77.68	uncharacterized protein LOC111487535 OS=Cucurbita maxima OX=3661 GN=LOC111487535...	[more]

BLAST of Pay0004812.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008441426.1	1.6e-117	99.53	PREDICTED: uncharacterized protein LOC103485546 [Cucumis melo]	[more]
XP_004138437.1	2.8e-114	96.28	uncharacterized protein LOC101207404 [Cucumis sativus] >KGN45763.1 hypothetical ...	[more]
KAA0041505.1	1.6e-101	91.30	E3 ubiquitin-protein ligase MARCH8 [Cucumis melo var. makuwa] >TYK24378.1 E3 ubi...	[more]
XP_038884403.1	2.4e-94	82.10	uncharacterized protein LOC120075258 [Benincasa hispida]	[more]
KAG6602635.1	9.5e-91	77.23	hypothetical protein SDJN03_07868, partial [Cucurbita argyrosperma subsp. sorori...	[more]

BLAST of Pay0004812.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G05830.1	5.1e-58	66.05	RING/FYVE/PHD zinc finger superfamily protein	[more]
AT5G01070.2	5.7e-33	51.13	RING/FYVE/PHD zinc finger superfamily protein	[more]
AT2G37950.1	4.1e-31	51.88	RING/FYVE/PHD zinc finger superfamily protein	[more]
AT5G59000.1	2.2e-29	44.03	RING/FYVE/PHD zinc finger superfamily protein	[more]
AT2G34200.1	4.8e-16	36.31	RING/FYVE/PHD zinc finger superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Payzawat) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR011016	Zinc finger, RING-CH-type	SMART	SM00744	ringv_2	coord: 87..140 e-value: 2.1E-17 score: 73.8
IPR011016	Zinc finger, RING-CH-type	PFAM	PF12906	RINGv	coord: 88..139 e-value: 3.9E-9 score: 36.5
IPR011016	Zinc finger, RING-CH-type	PROSITE	PS51292	ZF_RING_CH	coord: 80..146 score: 17.014112
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	3.30.40.10	Zinc/RING finger domain, C3HC4 (zinc finger)	coord: 76..149 e-value: 1.1E-13 score: 52.5
None	No IPR available	PANTHER	PTHR46214	ZINC FINGER, RING-CH-TYPE	coord: 3..215
None	No IPR available	PANTHER	PTHR46214:SF30	RING/FYVE/PHD ZINC FINGER SUPERFAMILY PROTEIN	coord: 3..215
None	No IPR available	SUPERFAMILY	57850	RING/U-box	coord: 85..142

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Pay0004812	Pay0004812	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Pay0004812.1-exon	Pay0004812.1-exon-chr03:3023217..3023850	exon
Pay0004812.1-exon	Pay0004812.1-exon-chr03:3025709..3026558	exon

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Pay0004812.1-three_prime_utr	Pay0004812.1-three_prime_utr-chr03:3023217..3023603	three_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Pay0004812.1-cds	Pay0004812.1-cds-chr03:3023604..3023850	CDS
Pay0004812.1-cds	Pay0004812.1-cds-chr03:3025709..3026109	CDS

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Pay0004812.1-five_prime_utr	Pay0004812.1-five_prime_utr-chr03:3026110..3026558	five_prime_UTR

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Pay0004812.1	Pay0004812.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0008270	zinc ion binding