Pay0002038.1 (mRNA) Melon (Payzawat) v1

Overview


Name	Pay0002038.1
Type	mRNA
Organism	Cucumis melo L. var. inodorus cv. Payzawat (Melon (Payzawat) v1)
Description	ULP_PROTEASE domain-containing protein
Location	chr05: 20086589 .. 20088196 (-)
Sequence length	408
RNA-Seq Expression	Pay0002038.1
Synteny	Pay0002038.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAATACTTCAAATATCGAACCCTAGATTTTGCACAAAAGGATACTGCACGACGGCGACGGAGCGACTTTGACCAAGCTGAAGAAGAACAACACTCGGCGACGGAGCGACATTCGACGGATGACGTTTGGAAGATGGAGCGACGCCGACGAGTTCACAACGACACACGCGAAGAAAGAGAAGAAAAAATTGGGGGAGGCGGCGAGAAGTTTGTAAATTTTGAGAATTTTTTTGGGAATTTTGATTATTAAATATTTATATTAAAATAATATTTTTTATTTAGAAATTACTTAGTAATTCTTGAAGTTTTTAAAACGTCGAGAAATTTGGAAATTAACTTCCTCCGCCTTTTTCTAAAAATTCTTGACGTTTTAAAACGTCGAGAATTTAATTGATATAACTTGACGTTTTTAAAACGTCAAGAATTTAATCAGTATTTCTTGACGTTTTTAAAACGTCAAGAATTTAATCGGTATTTCTTAACGTTTTTAAAACGTCAAGTATAGTTACATATTATTTGACATTTGAAAAACGTCAAGAATGTCGATTTTATAAAAATTCATGACGTTTTAAAAACGTCAAGAATTTAGAAGATAATCCTTGATAGTTTATAACCGTCAAGAAAAAATTCATATTTTTTGACGGTTTAAAACCGTCAAGAATTCTAAAAATTGCCTACACTCCGTCTTTTCATCAAAATTCTTGACGGTTTTCCTATTAAACCACCCCTTTCTTGACGTTTTTACCAAAAACCGTCAAGAAAAAAAAATACAACTGTCAAGAAAGCCTCTTTTTCTAGTATTGTTAGATGTCTTTTGAAGTTTAGTAGCTTAGCTAATAGACAAAAATAATTATAGTTTAGGAACATGTTTGAGTTTTAACCATATTAATATATTACCTAAACAAACTCGATTCAATTTTGAATTTCTTTTCCACCTATTTTTTCTGAAATCTTATCGTTTGAAAAGAGGATTTATTGTGCATTATCGTTAAAATTTAAGAAGTCAATTTCTAAAAACAGGTACAATATTGATGTTGGAAAAATGAAATATTACAAACTAATATTTATATATTTGTAGTTGATACCTTATGTGTTATGTTATTAAATGATGTGTTAGCTAATTATCACCTTGCTATATATTGTTGTTCTCTTGTTAATATTGTGCTGCTACATTGTACATTAGTTGAGGTTCATTGTGAAATTATTTTCTTCTTTGTCATTTTAGAAGACGTATGTCTGTCAACTTCTTTCTTATAACCAAATGCTTAATATACTATACTTTTGAGAAATGTAGGACCTTGACGATTTTTCAATCTCAGAAGAATTTGAATATTATGTCATGAGATACATGCGCGAAATTGTGAGTAAGGACACAAGCATTATTACTGATGCGGTATGTTTTTCTAATGTGGTATGTTTTTAAACTACTTACATTGTAACATTATAAATAGTATAATATGACTAATTTTATTTTTAACAAAATGTCTACTCGACTTTTTATGTTTTATAGATTGATACAAGAAACTCATACTCACAGCTTGAATTGGATGAAGTACAAGTGGAGTGGACTGAATTTTTAGCTCGTATATATGACAGACACACCTAG

mRNA sequence

ATGAAATACTTCAAATATCGAACCCTAGATTTTGCACAAAAGGATACTGCACGACGGCGACGGAGCGACTTTGACCAAGCTGAAGAAGAACAACACTCGGCGACGGAGCGACATTCGACGGATGACGTTTGGAAGATGGAGCGACGCCGACGAGTTCACAACGACACACGCGAAGAAAGAGAAGAAAAAATTGGGGGAGGCGGCGAGAAGTTTGACCTTGACGATTTTTCAATCTCAGAAGAATTTGAATATTATGTCATGAGATACATGCGCGAAATTGTGAGTAAGGACACAAGCATTATTACTGATGCGATTGATACAAGAAACTCATACTCACAGCTTGAATTGGATGAAGTACAAGTGGAGTGGACTGAATTTTTAGCTCGTATATATGACAGACACACCTAG

Coding sequence (CDS)

ATGAAATACTTCAAATATCGAACCCTAGATTTTGCACAAAAGGATACTGCACGACGGCGACGGAGCGACTTTGACCAAGCTGAAGAAGAACAACACTCGGCGACGGAGCGACATTCGACGGATGACGTTTGGAAGATGGAGCGACGCCGACGAGTTCACAACGACACACGCGAAGAAAGAGAAGAAAAAATTGGGGGAGGCGGCGAGAAGTTTGACCTTGACGATTTTTCAATCTCAGAAGAATTTGAATATTATGTCATGAGATACATGCGCGAAATTGTGAGTAAGGACACAAGCATTATTACTGATGCGATTGATACAAGAAACTCATACTCACAGCTTGAATTGGATGAAGTACAAGTGGAGTGGACTGAATTTTTAGCTCGTATATATGACAGACACACCTAG

Protein sequence

MKYFKYRTLDFAQKDTARRRRSDFDQAEEEQHSATERHSTDDVWKMERRRRVHNDTREEREEKIGGGGEKFDLDDFSISEEFEYYVMRYMREIVSKDTSIITDAIDTRNSYSQLELDEVQVEWTEFLARIYDRHT

Homology

[Close]

BLAST of Pay0002038.1 vs. ExPASy TrEMBL
Match: A0A5A7UBQ4 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold102G001310 PE=4 SV=1)

HSP 1 Score: 98.2 bits (243), Expect = 2.8e-17
Identity = 52/70 (74.29%), Postives = 56/70 (80.00%), Query Frame = 0


Query: 73  LDDFSISEEFE-------------YYVMRYMREIVSKDTSIITDAIDTRNSYSQLELDEV 130
           LDDFSISEEFE             YYVMRYMREI+SKDTSIITDAIDTRNSYSQLELDEV
Sbjct: 214 LDDFSISEEFEKDQKNNILESDKGYYVMRYMREILSKDTSIITDAIDTRNSYSQLELDEV 273

[Close]

BLAST of Pay0002038.1 vs. ExPASy TrEMBL
Match: A0A5A7TC55 (Putative serine/threonine-protein kinase nek2 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold540G00090 PE=3 SV=1)

HSP 1 Score: 95.9 bits (237), Expect = 1.4e-16
Identity = 52/78 (66.67%), Postives = 56/78 (71.79%), Query Frame = 0


Query: 70  KFDLDDFSISEEFE------------------YYVMRYMREIVSKDTSIITDAIDTRNSY 129
           K+ LDDF I EEFE                  YYVMRYMREI+SKDTSIITDAIDTRNSY
Sbjct: 489 KYGLDDFPILEEFEKDQKNNILESGKGTVECGYYVMRYMREILSKDTSIITDAIDTRNSY 548

[Close]

BLAST of Pay0002038.1 vs. ExPASy TrEMBL
Match: A0A5A7TM46 (Transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold246G00590 PE=4 SV=1)

HSP 1 Score: 95.9 bits (237), Expect = 1.4e-16
Identity = 52/75 (69.33%), Postives = 55/75 (73.33%), Query Frame = 0


Query: 73  LDDFSISEEFE------------------YYVMRYMREIVSKDTSIITDAIDTRNSYSQL 130
           LDDF ISEEFE                  YYVMRYMREI+SKDTSIITDAIDTRNSYSQL
Sbjct: 897 LDDFPISEEFEKDQKNNILESGKGTVECGYYVMRYMREILSKDTSIITDAIDTRNSYSQL 956

[Close]

BLAST of Pay0002038.1 vs. ExPASy TrEMBL
Match: A0A5A7VAL2 (Transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold548G002420 PE=4 SV=1)

HSP 1 Score: 92.4 bits (228), Expect = 1.5e-15
Identity = 50/75 (66.67%), Postives = 54/75 (72.00%), Query Frame = 0


Query: 73   LDDFSISEEFE------------------YYVMRYMREIVSKDTSIITDAIDTRNSYSQL 130
            LDDF ISEEFE                  YYVMRYM EI+SKDTSIITDAIDTRNSYSQL
Sbjct: 970  LDDFPISEEFEKDQQNNILESGKGTVECGYYVMRYMHEILSKDTSIITDAIDTRNSYSQL 1029

[Close]

BLAST of Pay0002038.1 vs. ExPASy TrEMBL
Match: A0A5A7U5Q6 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold1250G00120 PE=4 SV=1)

HSP 1 Score: 90.9 bits (224), Expect = 4.4e-15
Identity = 44/55 (80.00%), Postives = 48/55 (87.27%), Query Frame = 0


Query: 81  EFEYYVMRYMREIVSKDTSIITDAIDTRNSYSQLELDEVQVEWTEFLARIYDRHT 136
           E+ YYVMRYMREIVSKDTSIITDAIDTRNSYSQLELDEV+VEW  F +  Y R+T
Sbjct: 165 EYGYYVMRYMREIVSKDTSIITDAIDTRNSYSQLELDEVRVEWLNFYSGTYHRYT 219

[Close]

BLAST of Pay0002038.1 vs. NCBI nr
Match: KAA0053313.1 (uncharacterized protein E6C27_scaffold102G001310 [Cucumis melo var. makuwa])

HSP 1 Score: 98.2 bits (243), Expect = 5.7e-17
Identity = 52/70 (74.29%), Postives = 56/70 (80.00%), Query Frame = 0


Query: 73  LDDFSISEEFE-------------YYVMRYMREIVSKDTSIITDAIDTRNSYSQLELDEV 130
           LDDFSISEEFE             YYVMRYMREI+SKDTSIITDAIDTRNSYSQLELDEV
Sbjct: 214 LDDFSISEEFEKDQKNNILESDKGYYVMRYMREILSKDTSIITDAIDTRNSYSQLELDEV 273

[Close]

BLAST of Pay0002038.1 vs. NCBI nr
Match: KAA0042505.1 (transposase [Cucumis melo var. makuwa])

HSP 1 Score: 95.9 bits (237), Expect = 2.8e-16
Identity = 52/75 (69.33%), Postives = 55/75 (73.33%), Query Frame = 0


Query: 73  LDDFSISEEFE------------------YYVMRYMREIVSKDTSIITDAIDTRNSYSQL 130
           LDDF ISEEFE                  YYVMRYMREI+SKDTSIITDAIDTRNSYSQL
Sbjct: 897 LDDFPISEEFEKDQKNNILESGKGTVECGYYVMRYMREILSKDTSIITDAIDTRNSYSQL 956

[Close]

BLAST of Pay0002038.1 vs. NCBI nr
Match: KAA0040673.1 (putative serine/threonine-protein kinase nek2 [Cucumis melo var. makuwa])

HSP 1 Score: 95.9 bits (237), Expect = 2.8e-16
Identity = 52/78 (66.67%), Postives = 56/78 (71.79%), Query Frame = 0


Query: 70  KFDLDDFSISEEFE------------------YYVMRYMREIVSKDTSIITDAIDTRNSY 129
           K+ LDDF I EEFE                  YYVMRYMREI+SKDTSIITDAIDTRNSY
Sbjct: 489 KYGLDDFPILEEFEKDQKNNILESGKGTVECGYYVMRYMREILSKDTSIITDAIDTRNSY 548

[Close]

BLAST of Pay0002038.1 vs. NCBI nr
Match: KAA0064274.1 (transposase [Cucumis melo var. makuwa])

HSP 1 Score: 92.4 bits (228), Expect = 3.1e-15
Identity = 50/75 (66.67%), Postives = 54/75 (72.00%), Query Frame = 0


Query: 73   LDDFSISEEFE------------------YYVMRYMREIVSKDTSIITDAIDTRNSYSQL 130
            LDDF ISEEFE                  YYVMRYM EI+SKDTSIITDAIDTRNSYSQL
Sbjct: 970  LDDFPISEEFEKDQQNNILESGKGTVECGYYVMRYMHEILSKDTSIITDAIDTRNSYSQL 1029

[Close]

BLAST of Pay0002038.1 vs. NCBI nr
Match: KAA0051213.1 (uncharacterized protein E6C27_scaffold1250G00120 [Cucumis melo var. makuwa])

HSP 1 Score: 90.9 bits (224), Expect = 9.1e-15
Identity = 44/55 (80.00%), Postives = 48/55 (87.27%), Query Frame = 0


Query: 81  EFEYYVMRYMREIVSKDTSIITDAIDTRNSYSQLELDEVQVEWTEFLARIYDRHT 136
           E+ YYVMRYMREIVSKDTSIITDAIDTRNSYSQLELDEV+VEW  F +  Y R+T
Sbjct: 165 EYGYYVMRYMREIVSKDTSIITDAIDTRNSYSQLELDEVRVEWLNFYSGTYHRYT 219

The following BLAST results are available for this feature:

BLAST of Pay0002038.1 vs.


Match Name	E-value	Identity	Description

BLAST of Pay0002038.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7UBQ4	2.8e-17	74.29	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]
A0A5A7TC55	1.4e-16	66.67	Putative serine/threonine-protein kinase nek2 OS=Cucumis melo var. makuwa OX=119...	[more]
A0A5A7TM46	1.4e-16	69.33	Transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold246G00590 PE...	[more]
A0A5A7VAL2	1.5e-15	66.67	Transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold548G002420 P...	[more]
A0A5A7U5Q6	4.4e-15	80.00	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]

BLAST of Pay0002038.1 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0053313.1	5.7e-17	74.29	uncharacterized protein E6C27_scaffold102G001310 [Cucumis melo var. makuwa]	[more]
KAA0042505.1	2.8e-16	69.33	transposase [Cucumis melo var. makuwa]	[more]
KAA0040673.1	2.8e-16	66.67	putative serine/threonine-protein kinase nek2 [Cucumis melo var. makuwa]	[more]
KAA0064274.1	3.1e-15	66.67	transposase [Cucumis melo var. makuwa]	[more]
KAA0051213.1	9.1e-15	80.00	uncharacterized protein E6C27_scaffold1250G00120 [Cucumis melo var. makuwa]	[more]

BLAST of Pay0002038.1 vs. NCBI nr


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Melon (Payzawat) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 16..42

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Pay0002038	Pay0002038	gene

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Pay0002038.1-cds	Pay0002038.1-cds-chr05:20086589..20086684	CDS
Pay0002038.1-cds	Pay0002038.1-cds-chr05:20086802..20086900	CDS
Pay0002038.1-cds	Pay0002038.1-cds-chr05:20087984..20088196	CDS

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Pay0002038.1-exon	Pay0002038.1-exon-chr05:20086589..20086684	exon
Pay0002038.1-exon	Pay0002038.1-exon-chr05:20086802..20086900	exon
Pay0002038.1-exon	Pay0002038.1-exon-chr05:20087984..20088196	exon

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Pay0002038.1	Pay0002038.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006508	proteolysis
molecular_function	GO:0008234	cysteine-type peptidase activity