PI0028744.1 (mRNA) Melon (PI 482460) v1

Overview


Name	PI0028744.1
Type	mRNA
Organism	Cucumis metuliferus (Melon (PI 482460) v1)
Description	Unknown protein
Location	chr09: 16226525 .. 16227340 (-)
Sequence length	630
RNA-Seq Expression	PI0028744.1
Synteny	PI0028744.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGTAGAGAAACCCCTTACCTCGGATGTGCTAAGTTCAAGTGCACCATGCGGCAAGGAAGGATCTGAATCGCGAGGAAGGGTGAGCTCCAAACGCTTACTCCTCAACGAGACCAAGACTCTATGCGGCAAGACCAAACACAAGGCGAAAAGACTAAGACCCAAGATTCGGAGAAGAATCAAAACCAAACCGCAACGGATGAAGACTTACCTCGCAGTCCAAGGGAGCTCGTGGTAAGAAGAGGCGGGCAGAGGGCCTCAGAGCGCTGCAAGACTCCTCAGCTCGCGGACAAAGGCAACTTGGCGAAACACGAGGTTGCTCGCGGACCACGGCTGGCGGCAAGGAAAGTTCGCGAACGAACACCTTAGCTCGCGAACAAGGGGCTAACAAAGAAAAGGGTTAATTCGCGGGGTAACTAGGAAGAACAGAACAGAACGCGAAGTGAGGTTAGGCTTGATGAAGGAGGATTTTCGGAACACTTACCAGAGGAGAGGACCAAACGAGCACCGAGTTAGCAACAAGGAGGCCTCACACCGTACCACTTTACAAACGAACCAACCTAGGCCACACAAGCAAGCGGCAAGGGTTTCCGGCGATACGGGTAGGCAGAGAAAGACTTTCGGACGGCGAGGCAACGCGCGGCGAAAGGATTTCTGGAGAGAAACGGTGGCTGCTCGGGGACTACACGCGAAGAAGAAAGAGCAAAGTGAGGGTTTAAGGCTGGAGCAAGGCCAAAACACGGCTGAAAAAGGGTTTAAGGCCAAAATTACCAAAATAGCCTTACTAACCCCAAAAATGATAATTTCACAACCTTAA

mRNA sequence

ATGGTAGAGAAACCCCTTACCTCGGATGTGCTAAGTTCAAGTGCACCATGCGGCAAGGAAGGATCTGAATCGCGAGGAAGGGTGAGCTCCAAACGCTTACTCCTCAACGAGACCAAGACTCTATGCGGCAAGACCAAACACAAGGCGAAAAGACTAAGACCCAAGATTCGGAGAAGAATCAAAACCAAACCGCAACGGATGAAGACTTACCTCGCAGTCCAAGGGAGCTCGTGGAAGAACAGAACAGAACGCGAAGTGAGGTTAGGCTTGATGAAGGAGGATTTTCGGAACACTTACCAGAGGAGAGGACCAAACGAGCACCGAGTTAGCAACAAGGAGGCCTCACACCGTACCACTTTACAAACGAACCAACCTAGGCCACACAAGCAAGCGGCAAGGGTTTCCGGCGATACGGGTAGGCAGAGAAAGACTTTCGGACGGCGAGGCAACGCGCGGCGAAAGGATTTCTGGAGAGAAACGGTGGCTGCTCGGGGACTACACGCGAAGAAGAAAGAGCAAAGTGAGGGTTTAAGGCTGGAGCAAGGCCAAAACACGGCTGAAAAAGGGTTTAAGGCCAAAATTACCAAAATAGCCTTACTAACCCCAAAAATGATAATTTCACAACCTTAA

Coding sequence (CDS)

ATGGTAGAGAAACCCCTTACCTCGGATGTGCTAAGTTCAAGTGCACCATGCGGCAAGGAAGGATCTGAATCGCGAGGAAGGGTGAGCTCCAAACGCTTACTCCTCAACGAGACCAAGACTCTATGCGGCAAGACCAAACACAAGGCGAAAAGACTAAGACCCAAGATTCGGAGAAGAATCAAAACCAAACCGCAACGGATGAAGACTTACCTCGCAGTCCAAGGGAGCTCGTGGAAGAACAGAACAGAACGCGAAGTGAGGTTAGGCTTGATGAAGGAGGATTTTCGGAACACTTACCAGAGGAGAGGACCAAACGAGCACCGAGTTAGCAACAAGGAGGCCTCACACCGTACCACTTTACAAACGAACCAACCTAGGCCACACAAGCAAGCGGCAAGGGTTTCCGGCGATACGGGTAGGCAGAGAAAGACTTTCGGACGGCGAGGCAACGCGCGGCGAAAGGATTTCTGGAGAGAAACGGTGGCTGCTCGGGGACTACACGCGAAGAAGAAAGAGCAAAGTGAGGGTTTAAGGCTGGAGCAAGGCCAAAACACGGCTGAAAAAGGGTTTAAGGCCAAAATTACCAAAATAGCCTTACTAACCCCAAAAATGATAATTTCACAACCTTAA

Protein sequence

MVEKPLTSDVLSSSAPCGKEGSESRGRVSSKRLLLNETKTLCGKTKHKAKRLRPKIRRRIKTKPQRMKTYLAVQGSSWKNRTEREVRLGLMKEDFRNTYQRRGPNEHRVSNKEASHRTTLQTNQPRPHKQAARVSGDTGRQRKTFGRRGNARRKDFWRETVAARGLHAKKKEQSEGLRLEQGQNTAEKGFKAKITKIALLTPKMIISQP

Homology

The following BLAST results are available for this feature:

BLAST of PI0028744.1 vs.


Match Name	E-value	Identity	Description

BLAST of PI0028744.1 vs.


Match Name	E-value	Identity	Description

BLAST of PI0028744.1 vs.


Match Name	E-value	Identity	Description

BLAST of PI0028744.1 vs.


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 115..129
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 133..150
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..32
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 102..150

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
PI0028744	PI0028744	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
PI0028744.1-exon	PI0028744.1-exon-chr09:16226525..16226921	exon
PI0028744.1-exon	PI0028744.1-exon-chr09:16227108..16227340	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
PI0028744.1-cds	PI0028744.1-cds-chr09:16226525..16226921	CDS
PI0028744.1-cds	PI0028744.1-cds-chr09:16227108..16227340	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
PI0028744.1	PI0028744.1-protein	polypeptide