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Sequences
The following sequences are available for this feature:
Gene sequence (with intron) Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. ATGAAGAGTTATTGTTACCTACTTGAGGAGGTTAACATATATGAGGAAGAGAAAATTACCATGAATCGATTCTACAATGGACTTAATGAGAAAATTATCGATATGCTTGTCGACCGAGAAGAAAATCGACCTTGTGAGGACGTGGAAGAAATGGTGCACATTGCCATCAAGATAGAAAGGCTACTCTAA mRNA sequence ATGAAGAGTTATTGTTACCTACTTGAGGAGGTTAACATATATGAGGAAGAGAAAATTACCATGAATCGATTCTACAATGGACTTAATGAGAAAATTATCGATATGCTTGTCGACCGAGAAGAAAATCGACCTTGTGAGGACGTGGAAGAAATGGTGCACATTGCCATCAAGATAGAAAGGCTACTCTAA Coding sequence (CDS) ATGAAGAGTTATTGTTACCTACTTGAGGAGGTTAACATATATGAGGAAGAGAAAATTACCATGAATCGATTCTACAATGGACTTAATGAGAAAATTATCGATATGCTTGTCGACCGAGAAGAAAATCGACCTTGTGAGGACGTGGAAGAAATGGTGCACATTGCCATCAAGATAGAAAGGCTACTCTAA Protein sequence MKSYCYLLEEVNIYEEEKITMNRFYNGLNEKIIDMLVDREENRPCEDVEEMVHIAIKIERLL
Homology
BLAST of PI0027792.1 vs. ExPASy TrEMBL
Match: A0A5A7UE26 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold60G001990 PE=4 SV=1) HSP 1 Score: 67.4 bits (163), Expect = 2.4e-08 Identity = 29/51 (56.86%), Postives = 44/51 (86.27%), Query Frame = 0
Query: 7 LLEEVNIYEEEKITMNRFYNGLNEKIIDMLVDREENRPCEDVEEMVHIAIK 58
LLE++ IYE++++ +NRFYNGLN++ +MLVD EE R CE++E+MVH+AI+
Sbjct: 15 LLEKMTIYEDKEVVINRFYNGLNKESFEMLVDHEEIRCCENLEDMVHVAIR 65
BLAST of PI0027792.1 vs. NCBI nr
Match: KAA0051791.1 (hypothetical protein E6C27_scaffold60G001990 [Cucumis melo var. makuwa]) HSP 1 Score: 67.4 bits (163), Expect = 5.0e-08 Identity = 29/51 (56.86%), Postives = 44/51 (86.27%), Query Frame = 0
Query: 7 LLEEVNIYEEEKITMNRFYNGLNEKIIDMLVDREENRPCEDVEEMVHIAIK 58
LLE++ IYE++++ +NRFYNGLN++ +MLVD EE R CE++E+MVH+AI+
Sbjct: 15 LLEKMTIYEDKEVVINRFYNGLNKESFEMLVDHEEIRCCENLEDMVHVAIR 65
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
|---|
| Match Name | E-value | Identity | Description | |
|---|
| A0A5A7UE26 | 2.4e-08 | 56.86 | Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| KAA0051791.1 | 5.0e-08 | 56.86 | hypothetical protein E6C27_scaffold60G001990 [Cucumis melo var. makuwa] | [more] |
| Match Name | E-value | Identity | Description | |
|---|
Relationships
This mRNA is a part of the following gene feature(s):
| Feature Name | Unique Name | Type |
|---|
| PI0027792 | PI0027792 | gene |
The following exon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Type |
|---|
| PI0027792.1-exon | PI0027792.1-exon-chr08:7909288..7909476 | exon |
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Type |
|---|
| PI0027792.1-cds | PI0027792.1-cds-chr08:7909288..7909476 | CDS |
The following polypeptide feature(s) derives from this mRNA:
| Feature Name | Unique Name | Type |
|---|
| PI0027792.1 | PI0027792.1-protein | polypeptide |
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