PI0026943.1 (mRNA) Melon (PI 482460) v1

Overview


Name	PI0026943.1
Type	mRNA
Organism	Cucumis metuliferus (Melon (PI 482460) v1)
Description	C2H2-type domain-containing protein
Location	chr04: 18783867 .. 18784403 (+)
Sequence length	537
RNA-Seq Expression	PI0026943.1
Synteny	PI0026943.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAATATGAAGAAAGCCTTGCAAAAGTAGTTGAAATTGAAACCAACAGCAACAACAATATTGTTGAAAAAGTACTTGAAATGGAAGAAACCCCATCAAGAGTTTTCCCCTGTTTGTTCTGTTCAAGAAAGTTTCAAAGCTCCCAAGCTTTAGGAGGCCATCAAAATGCTCATAAGAAAGAGAGGACTGCCGCGAGGAAAGCCAAGCGAATCTGCGATTACTCAGTGTCGCCACCATCGCCGTTCCCGTCACCGACATCGTTGGTTTTTGCAGCTAGCCAGCAGCAACATCATCCAGGGCTATTGCCACATCCTGTTTATATTGCTACTCATGGAGCTAATCTTCATTGTTTCCCTAATAACCAACAATTGTTATATGAAAACATGGTTTTTTGTGGTGGGGTTTGTTCAAGCAATAGATATCATCAAGATGAAGAAAATTTGTTCAATTGGGAGAGAAACATAAAGAAAGATCTTAGTAGGATAAATCATGATAAGGAAAAAGAGCAAAAACTTGATCTTTCTCTCCATTTATAG

mRNA sequence

ATGGAATATGAAGAAAGCCTTGCAAAAGTAGTTGAAATTGAAACCAACAGCAACAACAATATTGTTGAAAAAGTACTTGAAATGGAAGAAACCCCATCAAGAGTTTTCCCCTGTTTGTTCTGTTCAAGAAAGTTTCAAAGCTCCCAAGCTTTAGGAGGCCATCAAAATGCTCATAAGAAAGAGAGGACTGCCGCGAGGAAAGCCAAGCGAATCTGCGATTACTCAGTGTCGCCACCATCGCCGTTCCCGTCACCGACATCGTTGGTTTTTGCAGCTAGCCAGCAGCAACATCATCCAGGGCTATTGCCACATCCTGTTTATATTGCTACTCATGGAGCTAATCTTCATTGTTTCCCTAATAACCAACAATTGTTATATGAAAACATGGTTTTTTGTGGTGGGGTTTGTTCAAGCAATAGATATCATCAAGATGAAGAAAATTTGTTCAATTGGGAGAGAAACATAAAGAAAGATCTTAGTAGGATAAATCATGATAAGGAAAAAGAGCAAAAACTTGATCTTTCTCTCCATTTATAG

Coding sequence (CDS)

ATGGAATATGAAGAAAGCCTTGCAAAAGTAGTTGAAATTGAAACCAACAGCAACAACAATATTGTTGAAAAAGTACTTGAAATGGAAGAAACCCCATCAAGAGTTTTCCCCTGTTTGTTCTGTTCAAGAAAGTTTCAAAGCTCCCAAGCTTTAGGAGGCCATCAAAATGCTCATAAGAAAGAGAGGACTGCCGCGAGGAAAGCCAAGCGAATCTGCGATTACTCAGTGTCGCCACCATCGCCGTTCCCGTCACCGACATCGTTGGTTTTTGCAGCTAGCCAGCAGCAACATCATCCAGGGCTATTGCCACATCCTGTTTATATTGCTACTCATGGAGCTAATCTTCATTGTTTCCCTAATAACCAACAATTGTTATATGAAAACATGGTTTTTTGTGGTGGGGTTTGTTCAAGCAATAGATATCATCAAGATGAAGAAAATTTGTTCAATTGGGAGAGAAACATAAAGAAAGATCTTAGTAGGATAAATCATGATAAGGAAAAAGAGCAAAAACTTGATCTTTCTCTCCATTTATAG

Protein sequence

MEYEESLAKVVEIETNSNNNIVEKVLEMEETPSRVFPCLFCSRKFQSSQALGGHQNAHKKERTAARKAKRICDYSVSPPSPFPSPTSLVFAASQQQHHPGLLPHPVYIATHGANLHCFPNNQQLLYENMVFCGGVCSSNRYHQDEENLFNWERNIKKDLSRINHDKEKEQKLDLSLHL

Homology

[Close]

BLAST of PI0026943.1 vs. ExPASy Swiss-Prot
Match: Q9FKA9 (Protein LATE FLOWERING OS=Arabidopsis thaliana OX=3702 GN=LATE PE=2 SV=1)

HSP 1 Score: 93.2 bits (230), Expect = 3.2e-18
Identity = 70/183 (38.25%), Postives = 93/183 (50.82%), Query Frame = 0


Query: 11  VEIETNSNNNIVEKVLEMEETPS--RVFPCLFCSRKFQSSQALGGHQNAHKKERTAARKA 70
           VE+E        ++  + +E  S  R+FPCLFCSRKF SSQALGGHQNAHKKERTAAR+A
Sbjct: 8   VEVEGEEEIKPSKEANKTDENTSSLRIFPCLFCSRKFHSSQALGGHQNAHKKERTAARRA 67

Query: 71  KRICDYSVSPPSPFPSPTSLVFAASQQQHHPGLLPHPVYIATHGANLHCFPNNQQLLYEN 130
           KR  D+  +       P   VF +S  QHH  +L +P       A++ CFP       ++
Sbjct: 68  KRAYDFVNNNDFLHTLP---VFLSSPSQHHLTILGYPA-----SASVACFPTVHP---DH 127

Query: 131 MVF-------------CGGVCSSNRYHQDEENLFNWERNIKKDLSRINHDKEKEQKLDLS 179
            +F              G  C      Q   ++ +   N+      +N DK K+Q LDLS
Sbjct: 128 PIFKSSGSHVVLATSHQGRDCKGGYCCQQRVDILDHHYNV------VNSDKGKDQCLDLS 173

[Close]

BLAST of PI0026943.1 vs. ExPASy Swiss-Prot
Match: Q39263 (Zinc finger protein 4 OS=Arabidopsis thaliana OX=3702 GN=ZFP4 PE=2 SV=2)

HSP 1 Score: 62.4 bits (150), Expect = 6.0e-09
Identity = 31/71 (43.66%), Postives = 45/71 (63.38%), Query Frame = 0


Query: 1   MEYEESLAKVVEIETNSNNNIVEKVLEMEETPSRVFPCLFCSRKFQSSQALGGHQNAHKK 60
           ++ E S   +    T+ ++N  ++  +      RVF C +C RKF SSQALGGHQNAHK+
Sbjct: 50  LDLESSSLTLPLSSTSESSNPEQQQQQQPSVSKRVFSCNYCQRKFYSSQALGGHQNAHKR 109

Query: 61  ERTAARKAKRI 72
           ERT A++A R+
Sbjct: 110 ERTLAKRAMRM 120

[Close]

BLAST of PI0026943.1 vs. ExPASy Swiss-Prot
Match: Q39261 (Zinc finger protein 2 OS=Arabidopsis thaliana OX=3702 GN=ZFP2 PE=1 SV=1)

HSP 1 Score: 60.1 bits (144), Expect = 3.0e-08
Identity = 31/54 (57.41%), Postives = 37/54 (68.52%), Query Frame = 0


Query: 34  RVFPCLFCSRKFQSSQALGGHQNAHKKERTAARKAKRICDYSVSPPSPFPSPTS 88
           RVF C +C RKF SSQALGGHQNAHK ERT A+K++ +   S +  S  P P S
Sbjct: 50  RVFSCNYCQRKFYSSQALGGHQNAHKLERTLAKKSRELFRSSNTVDSDQPYPFS 103

[Close]

BLAST of PI0026943.1 vs. ExPASy Swiss-Prot
Match: Q39266 (Zinc finger protein 7 OS=Arabidopsis thaliana OX=3702 GN=ZFP7 PE=1 SV=1)

HSP 1 Score: 60.1 bits (144), Expect = 3.0e-08
Identity = 39/94 (41.49%), Postives = 52/94 (55.32%), Query Frame = 0


Query: 11  VEIETNSNNNIVEKVLEMEETPSRVFPCLFCSRKFQSSQALGGHQNAHKKERTAARKAKR 70
           ++++ N   N   K  + E  P RVF C +C RKF SSQALGGHQNAHK+ERT A++A  
Sbjct: 35  LDLKLNDTFNDDTKSTKCEANP-RVFSCNYCRRKFYSSQALGGHQNAHKRERTMAKRAMH 94

Query: 71  ICDYSVSPPSPFPSPTSLVFAASQQQHHPGLLPH 105
           +         P+   +S    +   Q H GLL H
Sbjct: 95  MGRMFGHHHRPYTYTSS----SLGMQAHSGLLHH 123

[Close]

BLAST of PI0026943.1 vs. ExPASy Swiss-Prot
Match: Q9FFX4 (Zinc finger protein KNUCKLES OS=Arabidopsis thaliana OX=3702 GN=KNU PE=1 SV=1)

HSP 1 Score: 59.7 bits (143), Expect = 3.9e-08
Identity = 25/34 (73.53%), Postives = 30/34 (88.24%), Query Frame = 0


Query: 34 RVFPCLFCSRKFQSSQALGGHQNAHKKERTAARK 68
          R+FPC +C RKF +SQALGGHQNAHK+ER AAR+
Sbjct: 36 RLFPCQYCPRKFYTSQALGGHQNAHKRERAAARR 69

[Close]

BLAST of PI0026943.1 vs. ExPASy TrEMBL
Match: A0A1S3BIU8 (protein LATE FLOWERING-like OS=Cucumis melo OX=3656 GN=LOC103490048 PE=4 SV=1)

HSP 1 Score: 342.8 bits (878), Expect = 8.5e-91
Identity = 171/179 (95.53%), Postives = 174/179 (97.21%), Query Frame = 0


Query: 1   MEYEESLAKVVEIETNSNNNIVEKVLEMEETPSRVFPCLFCSRKFQSSQALGGHQNAHKK 60
           MEYEESL+KVVEIETN NN+IVEKVLEMEETPSRVFPCLFCSRKFQSSQALGGHQNAHKK
Sbjct: 1   MEYEESLSKVVEIETN-NNDIVEKVLEMEETPSRVFPCLFCSRKFQSSQALGGHQNAHKK 60

Query: 61  ERTAARKAKRICDYSVSPPSPFPSPTSLVFAASQQQHHP-GLLPHPVYIATHGANLHCFP 120
           ERTAARKAKRICDYSVSPPSPF +PTSLVFAASQQQHHP GLLPHPVYIATHGANLHCFP
Sbjct: 61  ERTAARKAKRICDYSVSPPSPFSAPTSLVFAASQQQHHPAGLLPHPVYIATHGANLHCFP 120

Query: 121 NNQQLLYENMVFCGGVCSSNRYHQDEENLFNWERNIKKDLSRINHDKEKEQKLDLSLHL 179
           NNQQLLYENMVFCGGVCSSNRYHQDEENL NWERNIK DLSRINHDKEKEQKLDLSLHL
Sbjct: 121 NNQQLLYENMVFCGGVCSSNRYHQDEENLLNWERNIKNDLSRINHDKEKEQKLDLSLHL 178

[Close]

BLAST of PI0026943.1 vs. ExPASy TrEMBL
Match: A0A0A0LE19 (C2H2-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G624040 PE=4 SV=1)

HSP 1 Score: 310.1 bits (793), Expect = 6.1e-81
Identity = 147/151 (97.35%), Postives = 148/151 (98.01%), Query Frame = 0


Query: 28  MEETPSRVFPCLFCSRKFQSSQALGGHQNAHKKERTAARKAKRICDYSVSPPSPFPSPTS 87
           MEE PSRVFPCLFCSRKFQSSQALGGHQNAHKKERTAARKAKRICDYSVSPPSPFP+PTS
Sbjct: 1   MEEAPSRVFPCLFCSRKFQSSQALGGHQNAHKKERTAARKAKRICDYSVSPPSPFPAPTS 60

Query: 88  LVFAASQQQHHPGLLPHPVYIATHGANLHCFPNNQQLLYENMVFCGGVCSSNRYHQDEEN 147
           LVFAASQQQHHPGLLPHPVYIATHGANLHCFPNNQQLLYENMVFCGGVC SNRYHQDEEN
Sbjct: 61  LVFAASQQQHHPGLLPHPVYIATHGANLHCFPNNQQLLYENMVFCGGVCPSNRYHQDEEN 120

Query: 148 LFNWERNIKKDLSRINHDKEKEQKLDLSLHL 179
           L NWERNIKKDLSRINHDKEKEQKLDLSLHL
Sbjct: 121 LLNWERNIKKDLSRINHDKEKEQKLDLSLHL 151

[Close]

BLAST of PI0026943.1 vs. ExPASy TrEMBL
Match: A0A5A7VIQ7 (Protein LATE FLOWERING-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold21G002620 PE=4 SV=1)

HSP 1 Score: 304.3 bits (778), Expect = 3.4e-79
Identity = 147/152 (96.71%), Postives = 148/152 (97.37%), Query Frame = 0


Query: 28  MEETPSRVFPCLFCSRKFQSSQALGGHQNAHKKERTAARKAKRICDYSVSPPSPFPSPTS 87
           MEETPSRVFPCLFCSRKFQSSQALGGHQNAHKKERTAARKAKRICDYSVSPPSPF +PTS
Sbjct: 1   MEETPSRVFPCLFCSRKFQSSQALGGHQNAHKKERTAARKAKRICDYSVSPPSPFSAPTS 60

Query: 88  LVFAASQQQHHP-GLLPHPVYIATHGANLHCFPNNQQLLYENMVFCGGVCSSNRYHQDEE 147
           LVFAASQQQHHP GLLPHPVYIATHGANLHCFPNNQQLLYENMVFCGGVCSSNRYHQDEE
Sbjct: 61  LVFAASQQQHHPAGLLPHPVYIATHGANLHCFPNNQQLLYENMVFCGGVCSSNRYHQDEE 120

Query: 148 NLFNWERNIKKDLSRINHDKEKEQKLDLSLHL 179
           NL NWERNIK DLSRINHDKEKEQKLDLSLHL
Sbjct: 121 NLLNWERNIKNDLSRINHDKEKEQKLDLSLHL 152

[Close]

BLAST of PI0026943.1 vs. ExPASy TrEMBL
Match: A0A6J1ETH7 (protein LATE FLOWERING OS=Cucurbita moschata OX=3662 GN=LOC111437406 PE=4 SV=1)

HSP 1 Score: 213.0 bits (541), Expect = 1.0e-51
Identity = 116/189 (61.38%), Postives = 133/189 (70.37%), Query Frame = 0


Query: 1   MEYEESLAKVVEIETNSNNNIVEKVLEMEETPSRVFPCLFCSRKFQSSQALGGHQNAHKK 60
           ME EE   +V E  +          +EMEETPSR+FPCLFCSRKFQ+SQALGGHQNAHKK
Sbjct: 1   MEDEEQPLQVAESSS----------VEMEETPSRIFPCLFCSRKFQTSQALGGHQNAHKK 60

Query: 61  ERTAARKAKRICDYSVSPPSPFPSPTSLVFAASQQQHHPGLLPHPVYIATHGANLHCFPN 120
           ERTA RKAKR+ DYS S  S   S    VFA +QQ HHP +LPHPVYIA HGANLHCFPN
Sbjct: 61  ERTAVRKAKRLSDYSSSSSSSLSSRPLSVFAGNQQLHHPAILPHPVYIAAHGANLHCFPN 120

Query: 121 NQQLLY---------ENMVFCGGVCSSNRYH--QDEENLFNWERNIKKDLSRINHDKEKE 179
           NQQ+ Y         E+MV+ GGVCS NRY   +DE+++ NW+R+IKK       DKEKE
Sbjct: 121 NQQVFYDGLGVVPKFEDMVYYGGVCSYNRYQCGEDEDHVLNWQRSIKK-------DKEKE 172

[Close]

BLAST of PI0026943.1 vs. ExPASy TrEMBL
Match: A0A6J1HVN7 (protein LATE FLOWERING-like OS=Cucurbita maxima OX=3661 GN=LOC111467088 PE=4 SV=1)

HSP 1 Score: 209.1 bits (531), Expect = 1.5e-50
Identity = 111/160 (69.38%), Postives = 125/160 (78.12%), Query Frame = 0


Query: 28  MEETPSRVFPCLFCSRKFQSSQALGGHQNAHKKERTAARKAKRICDYSVS-PPSPFPSPT 87
           MEE PSR+FPCLFCSRKFQSSQALGGHQNAHKKERTAARKAKRI DY+ S  PSP  S +
Sbjct: 14  MEEIPSRIFPCLFCSRKFQSSQALGGHQNAHKKERTAARKAKRISDYAASESPSPSSSSS 73

Query: 88  SLVFAASQQQ-HHPGLLPHPVYIATHGANLHCFPNNQQLLYENMVFCGGVCSSNRYH--- 147
           S VFAA+  Q HHPGL PHP+YIA + ANLHCFPNN  L YE+M + GGVCSSNRYH   
Sbjct: 74  SSVFAATHHQTHHPGLYPHPMYIA-NAANLHCFPNNPPLFYEHMGYYGGVCSSNRYHHHH 133

Query: 148 ----QDEENLFNWERNIKKDLSRINHDKEKEQKLDLSLHL 179
               +DE+N+ NW+RNIK       +DK+KEQKLDLSLHL
Sbjct: 134 QYGVEDEQNVLNWQRNIK-------NDKKKEQKLDLSLHL 165

[Close]

BLAST of PI0026943.1 vs. NCBI nr
Match: XP_031739318.1 (protein LATE FLOWERING [Cucumis sativus])

HSP 1 Score: 347.4 bits (890), Expect = 7.1e-92
Identity = 170/178 (95.51%), Postives = 174/178 (97.75%), Query Frame = 0


Query: 1   MEYEESLAKVVEIETNSNNNIVEKVLEMEETPSRVFPCLFCSRKFQSSQALGGHQNAHKK 60
           MEYEESL+KVVEIETN +NNIVEKV+EMEE PSRVFPCLFCSRKFQSSQALGGHQNAHKK
Sbjct: 1   MEYEESLSKVVEIETN-DNNIVEKVVEMEEAPSRVFPCLFCSRKFQSSQALGGHQNAHKK 60

Query: 61  ERTAARKAKRICDYSVSPPSPFPSPTSLVFAASQQQHHPGLLPHPVYIATHGANLHCFPN 120
           ERTAARKAKRICDYSVSPPSPFP+PTSLVFAASQQQHHPGLLPHPVYIATHGANLHCFPN
Sbjct: 61  ERTAARKAKRICDYSVSPPSPFPAPTSLVFAASQQQHHPGLLPHPVYIATHGANLHCFPN 120

Query: 121 NQQLLYENMVFCGGVCSSNRYHQDEENLFNWERNIKKDLSRINHDKEKEQKLDLSLHL 179
           NQQLLYENMVFCGGVC SNRYHQDEENL NWERNIKKDLSRINHDKEKEQKLDLSLHL
Sbjct: 121 NQQLLYENMVFCGGVCPSNRYHQDEENLLNWERNIKKDLSRINHDKEKEQKLDLSLHL 177

[Close]

BLAST of PI0026943.1 vs. NCBI nr
Match: XP_008447640.1 (PREDICTED: protein LATE FLOWERING-like [Cucumis melo])

HSP 1 Score: 342.8 bits (878), Expect = 1.8e-90
Identity = 171/179 (95.53%), Postives = 174/179 (97.21%), Query Frame = 0


Query: 1   MEYEESLAKVVEIETNSNNNIVEKVLEMEETPSRVFPCLFCSRKFQSSQALGGHQNAHKK 60
           MEYEESL+KVVEIETN NN+IVEKVLEMEETPSRVFPCLFCSRKFQSSQALGGHQNAHKK
Sbjct: 1   MEYEESLSKVVEIETN-NNDIVEKVLEMEETPSRVFPCLFCSRKFQSSQALGGHQNAHKK 60

Query: 61  ERTAARKAKRICDYSVSPPSPFPSPTSLVFAASQQQHHP-GLLPHPVYIATHGANLHCFP 120
           ERTAARKAKRICDYSVSPPSPF +PTSLVFAASQQQHHP GLLPHPVYIATHGANLHCFP
Sbjct: 61  ERTAARKAKRICDYSVSPPSPFSAPTSLVFAASQQQHHPAGLLPHPVYIATHGANLHCFP 120

Query: 121 NNQQLLYENMVFCGGVCSSNRYHQDEENLFNWERNIKKDLSRINHDKEKEQKLDLSLHL 179
           NNQQLLYENMVFCGGVCSSNRYHQDEENL NWERNIK DLSRINHDKEKEQKLDLSLHL
Sbjct: 121 NNQQLLYENMVFCGGVCSSNRYHQDEENLLNWERNIKNDLSRINHDKEKEQKLDLSLHL 178

[Close]

BLAST of PI0026943.1 vs. NCBI nr
Match: KAA0066236.1 (protein LATE FLOWERING-like [Cucumis melo var. makuwa])

HSP 1 Score: 304.3 bits (778), Expect = 6.9e-79
Identity = 147/152 (96.71%), Postives = 148/152 (97.37%), Query Frame = 0


Query: 28  MEETPSRVFPCLFCSRKFQSSQALGGHQNAHKKERTAARKAKRICDYSVSPPSPFPSPTS 87
           MEETPSRVFPCLFCSRKFQSSQALGGHQNAHKKERTAARKAKRICDYSVSPPSPF +PTS
Sbjct: 1   MEETPSRVFPCLFCSRKFQSSQALGGHQNAHKKERTAARKAKRICDYSVSPPSPFSAPTS 60

Query: 88  LVFAASQQQHHP-GLLPHPVYIATHGANLHCFPNNQQLLYENMVFCGGVCSSNRYHQDEE 147
           LVFAASQQQHHP GLLPHPVYIATHGANLHCFPNNQQLLYENMVFCGGVCSSNRYHQDEE
Sbjct: 61  LVFAASQQQHHPAGLLPHPVYIATHGANLHCFPNNQQLLYENMVFCGGVCSSNRYHQDEE 120

Query: 148 NLFNWERNIKKDLSRINHDKEKEQKLDLSLHL 179
           NL NWERNIK DLSRINHDKEKEQKLDLSLHL
Sbjct: 121 NLLNWERNIKNDLSRINHDKEKEQKLDLSLHL 152

[Close]

BLAST of PI0026943.1 vs. NCBI nr
Match: XP_038888938.1 (protein LATE FLOWERING [Benincasa hispida])

HSP 1 Score: 297.0 bits (759), Expect = 1.1e-76
Identity = 152/184 (82.61%), Postives = 160/184 (86.96%), Query Frame = 0


Query: 1   MEYEESLAKVVEIETNSNNNIVEKVLEMEETPSRVFPCLFCSRKFQSSQALGGHQNAHKK 60
           MEYEE L++V E    +NNNIV    EMEETP+RVFPCLFCSRKFQSSQALGGHQNAHKK
Sbjct: 1   MEYEEKLSQVAE----TNNNIV----EMEETPTRVFPCLFCSRKFQSSQALGGHQNAHKK 60

Query: 61  ERTAARKAKRICDYSV---SPPSPFPSPTSLVFAASQQQHHPGLLPHPVYIATHGANLHC 120
           ERTAARKAKRI DYS    SPPSPFP+P SLVF AS QQHHPGLLP PVYIATHG NLHC
Sbjct: 61  ERTAARKAKRISDYSTNFSSPPSPFPAPPSLVFPASHQQHHPGLLPQPVYIATHGTNLHC 120

Query: 121 FPNNQQLLYENMVFCGGVCSSNRYHQ---DEENLFNWERNIKKDLSRINHDKEKEQKLDL 179
           FPNNQQLLYENMV+CGGVC+SNRYHQ   DEENL NWER+IKKDLSRINHDKEKEQKLDL
Sbjct: 121 FPNNQQLLYENMVYCGGVCTSNRYHQCGADEENLLNWERSIKKDLSRINHDKEKEQKLDL 176

[Close]

BLAST of PI0026943.1 vs. NCBI nr
Match: KAE8650843.1 (hypothetical protein Csa_017433, partial [Cucumis sativus])

HSP 1 Score: 240.4 bits (612), Expect = 1.2e-59
Identity = 118/124 (95.16%), Postives = 122/124 (98.39%), Query Frame = 0


Query: 1   MEYEESLAKVVEIETNSNNNIVEKVLEMEETPSRVFPCLFCSRKFQSSQALGGHQNAHKK 60
           MEYEESL+KVVEIETN +NNIVEKV+EMEE PSRVFPCLFCSRKFQSSQALGGHQNAHKK
Sbjct: 1   MEYEESLSKVVEIETN-DNNIVEKVVEMEEAPSRVFPCLFCSRKFQSSQALGGHQNAHKK 60

Query: 61  ERTAARKAKRICDYSVSPPSPFPSPTSLVFAASQQQHHPGLLPHPVYIATHGANLHCFPN 120
           ERTAARKAKRICDYSVSPPSPFP+PTSLVFAASQQQHHPGLLPHPVYIATHGANLHCFPN
Sbjct: 61  ERTAARKAKRICDYSVSPPSPFPAPTSLVFAASQQQHHPGLLPHPVYIATHGANLHCFPN 120

Query: 121 NQQL 125
           NQQL
Sbjct: 121 NQQL 123

[Close]

BLAST of PI0026943.1 vs. TAIR 10
Match: AT5G48890.1 (C2H2-like zinc finger protein )

HSP 1 Score: 93.2 bits (230), Expect = 2.3e-19
Identity = 70/183 (38.25%), Postives = 93/183 (50.82%), Query Frame = 0


Query: 11  VEIETNSNNNIVEKVLEMEETPS--RVFPCLFCSRKFQSSQALGGHQNAHKKERTAARKA 70
           VE+E        ++  + +E  S  R+FPCLFCSRKF SSQALGGHQNAHKKERTAAR+A
Sbjct: 8   VEVEGEEEIKPSKEANKTDENTSSLRIFPCLFCSRKFHSSQALGGHQNAHKKERTAARRA 67

Query: 71  KRICDYSVSPPSPFPSPTSLVFAASQQQHHPGLLPHPVYIATHGANLHCFPNNQQLLYEN 130
           KR  D+  +       P   VF +S  QHH  +L +P       A++ CFP       ++
Sbjct: 68  KRAYDFVNNNDFLHTLP---VFLSSPSQHHLTILGYPA-----SASVACFPTVHP---DH 127

Query: 131 MVF-------------CGGVCSSNRYHQDEENLFNWERNIKKDLSRINHDKEKEQKLDLS 179
            +F              G  C      Q   ++ +   N+      +N DK K+Q LDLS
Sbjct: 128 PIFKSSGSHVVLATSHQGRDCKGGYCCQQRVDILDHHYNV------VNSDKGKDQCLDLS 173

[Close]

BLAST of PI0026943.1 vs. TAIR 10
Match: AT5G01860.1 (C2H2 and C2HC zinc fingers superfamily protein )

HSP 1 Score: 63.9 bits (154), Expect = 1.5e-10
Identity = 36/78 (46.15%), Postives = 53/78 (67.95%), Query Frame = 0


Query: 30  ETPSRVFPCLFCSRKFQSSQALGGHQNAHKKERTAARKAKRI-CDY-SVSPPSPFPSPTS 89
           E  +RVF C FC ++F +SQALGGHQNAHK+ER+ A++ K I  +Y  +S  S +P P+ 
Sbjct: 61  EAKARVFACTFCKKEFSTSQALGGHQNAHKQERSLAKRRKEIEINYPELSIYSQYP-PSG 120

Query: 90  LVFAASQQQHHPGLLPHP 106
           L F++S  Q+  G+  +P
Sbjct: 121 LSFSSSSSQYDLGVRYNP 137

[Close]

BLAST of PI0026943.1 vs. TAIR 10
Match: AT1G66140.1 (zinc finger protein 4 )

HSP 1 Score: 62.4 bits (150), Expect = 4.3e-10
Identity = 31/71 (43.66%), Postives = 45/71 (63.38%), Query Frame = 0


Query: 1   MEYEESLAKVVEIETNSNNNIVEKVLEMEETPSRVFPCLFCSRKFQSSQALGGHQNAHKK 60
           ++ E S   +    T+ ++N  ++  +      RVF C +C RKF SSQALGGHQNAHK+
Sbjct: 50  LDLESSSLTLPLSSTSESSNPEQQQQQQPSVSKRVFSCNYCQRKFYSSQALGGHQNAHKR 109

Query: 61  ERTAARKAKRI 72
           ERT A++A R+
Sbjct: 110 ERTLAKRAMRM 120

[Close]

BLAST of PI0026943.1 vs. TAIR 10
Match: AT1G24625.1 (zinc finger protein 7 )

HSP 1 Score: 60.1 bits (144), Expect = 2.1e-09
Identity = 39/94 (41.49%), Postives = 52/94 (55.32%), Query Frame = 0


Query: 11  VEIETNSNNNIVEKVLEMEETPSRVFPCLFCSRKFQSSQALGGHQNAHKKERTAARKAKR 70
           ++++ N   N   K  + E  P RVF C +C RKF SSQALGGHQNAHK+ERT A++A  
Sbjct: 35  LDLKLNDTFNDDTKSTKCEANP-RVFSCNYCRRKFYSSQALGGHQNAHKRERTMAKRAMH 94

Query: 71  ICDYSVSPPSPFPSPTSLVFAASQQQHHPGLLPH 105
           +         P+   +S    +   Q H GLL H
Sbjct: 95  MGRMFGHHHRPYTYTSS----SLGMQAHSGLLHH 123

[Close]

BLAST of PI0026943.1 vs. TAIR 10
Match: AT5G57520.1 (zinc finger protein 2 )

HSP 1 Score: 60.1 bits (144), Expect = 2.1e-09
Identity = 31/54 (57.41%), Postives = 37/54 (68.52%), Query Frame = 0


Query: 34  RVFPCLFCSRKFQSSQALGGHQNAHKKERTAARKAKRICDYSVSPPSPFPSPTS 88
           RVF C +C RKF SSQALGGHQNAHK ERT A+K++ +   S +  S  P P S
Sbjct: 50  RVFSCNYCQRKFYSSQALGGHQNAHKLERTLAKKSRELFRSSNTVDSDQPYPFS 103

The following BLAST results are available for this feature:

BLAST of PI0026943.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FKA9	3.2e-18	38.25	Protein LATE FLOWERING OS=Arabidopsis thaliana OX=3702 GN=LATE PE=2 SV=1	[more]
Q39263	6.0e-09	43.66	Zinc finger protein 4 OS=Arabidopsis thaliana OX=3702 GN=ZFP4 PE=2 SV=2	[more]
Q39261	3.0e-08	57.41	Zinc finger protein 2 OS=Arabidopsis thaliana OX=3702 GN=ZFP2 PE=1 SV=1	[more]
Q39266	3.0e-08	41.49	Zinc finger protein 7 OS=Arabidopsis thaliana OX=3702 GN=ZFP7 PE=1 SV=1	[more]
Q9FFX4	3.9e-08	73.53	Zinc finger protein KNUCKLES OS=Arabidopsis thaliana OX=3702 GN=KNU PE=1 SV=1	[more]

BLAST of PI0026943.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3BIU8	8.5e-91	95.53	protein LATE FLOWERING-like OS=Cucumis melo OX=3656 GN=LOC103490048 PE=4 SV=1	[more]
A0A0A0LE19	6.1e-81	97.35	C2H2-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G624040 P...	[more]
A0A5A7VIQ7	3.4e-79	96.71	Protein LATE FLOWERING-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaf...	[more]
A0A6J1ETH7	1.0e-51	61.38	protein LATE FLOWERING OS=Cucurbita moschata OX=3662 GN=LOC111437406 PE=4 SV=1	[more]
A0A6J1HVN7	1.5e-50	69.38	protein LATE FLOWERING-like OS=Cucurbita maxima OX=3661 GN=LOC111467088 PE=4 SV=...	[more]

BLAST of PI0026943.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_031739318.1	7.1e-92	95.51	protein LATE FLOWERING [Cucumis sativus]	[more]
XP_008447640.1	1.8e-90	95.53	PREDICTED: protein LATE FLOWERING-like [Cucumis melo]	[more]
KAA0066236.1	6.9e-79	96.71	protein LATE FLOWERING-like [Cucumis melo var. makuwa]	[more]
XP_038888938.1	1.1e-76	82.61	protein LATE FLOWERING [Benincasa hispida]	[more]
KAE8650843.1	1.2e-59	95.16	hypothetical protein Csa_017433, partial [Cucumis sativus]	[more]

BLAST of PI0026943.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G48890.1	2.3e-19	38.25	C2H2-like zinc finger protein	[more]
AT5G01860.1	1.5e-10	46.15	C2H2 and C2HC zinc fingers superfamily protein	[more]
AT1G66140.1	4.3e-10	43.66	zinc finger protein 4	[more]
AT1G24625.1	2.1e-09	41.49	zinc finger protein 7	[more]
AT5G57520.1	2.1e-09	57.41	zinc finger protein 2	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	3.30.160.60	Classic Zinc Finger	coord: 14..77 e-value: 7.6E-7 score: 30.9
None	No IPR available	PANTHER	PTHR45730:SF80	PROTEIN LATE FLOWERING	coord: 29..178
None	No IPR available	PANTHER	PTHR45730	ZINC FINGER PROTEIN JAGGED	coord: 29..178
IPR013087	Zinc finger C2H2-type	PROSITE	PS00028	ZINC_FINGER_C2H2_1	coord: 38..58
IPR013087	Zinc finger C2H2-type	PROSITE	PS50157	ZINC_FINGER_C2H2_2	coord: 36..63 score: 10.969637
IPR036236	Zinc finger C2H2 superfamily	SUPERFAMILY	57667	beta-beta-alpha zinc fingers	coord: 32..63

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
PI0026943	PI0026943	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
PI0026943.1-exon	PI0026943.1-exon-chr04:18783867..18784403	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
PI0026943.1-cds	PI0026943.1-cds-chr04:18783867..18784403	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
PI0026943.1	PI0026943.1-protein	polypeptide