PI0026547.2 (mRNA) Melon (PI 482460) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.AAAGGTTAAAAGCGTAATTTCATAATAGAGAAAAAGACAAACATCTGAACTTGGGCTATTTTTCATTTGGAACCTCTGAAAAAAAATCCTCTACACAATTATTTCATCTAAAACGTATTAGTAAAAATCTCGATAATATAAAATGAAAGGGTTTTGATATTCGCTCGATTACTGTTGCCGATTTTTGAGGCAGTTGCCCTAACAGCTACCACTCGTTCAATCGGGTAAGAATTCTTATTTCTTCCCCAATTAATCGGTGGATTACATAATATTTCAATTGCTCGACCCACGCAAAAGCAACCAGCTGATTATAATTCTAACAGTTCCGATTCCATTTATCAGCTGGGTTCGCTGTTAAGGTAAGCTAACTGTAAAATTTGATTGAATATGCTTCAATTACTATGTATTCTTGCATGTTGAAAACAAATTTGTCATTAGGACCTCATGTTTTCTTATAATTACTCTCCTTTTAAATCTTACTTTGCTTGTTGATTATCATCTGTAATCACAGATTTTACTTTCGCTTGTTGCGACCCTGTTCCTTTTATTGTCATGCTGTATCTATTTCTTTTCTTTTTCCATCTTCATTAGTAACCTCACATTGATGTTGAATTGATTCGATTCATTTTTTTTTCCGAATAATCGTTGTTATGAAGTGAATTCGAGCAAGTTAGTCATAATCTTCGTAATTTTTTATTTATTTATTTTTACTTATCTATATAATTGCGAGTGTTCGACATCGGACTAATCTCACAAGACAATCCACTTTATCGTAAGCTATTTGGATGTCAATGAAACTTATTGGGTATTAAATTCTAGGTAGGTAGTCAATGAGTTGACTTTTTCCTTCTAGGTCCTATTTACCTCTAGGCTAATGATAGTTCATGATTTTCATATCGAGTTTACTGATACTTGGAATTGTTATCAACTGTGGGATCAATATTAGGAAAATAATGGTTAGGGCATTTTTATTTTTGTTAATTTATGGCAATAGTTGATGTCAATTAGAATCATTCTATAGTAGTTTGACAAACCAATCAGCTCTCTTAAGCCCAAGGCTATTAAGGAAAACAGGAAGTTTGTCCCTCGAGCCTGACACTGATCCTTACATCCTTGATGGCTACTTGTTAGCTCCTCAGTTGAATGAAATAAATCAAGAAATAGCTGCTGGTTTGAAGGCATCTTCTTTTAGTTCAATAATTTGCAAAATCGAGAGTGCATTGTTTTATATCATTTGACTGCTGAACTAAACCACTACTCACTCTCTTGTTCTCCTCAAGGATGATAAATCACAAAAAGGTCGATTGATTTGGCAAATAGAGTTTTTATTAGGAAGATTGACACTATTGACTAAATGAGACTGGCTTATTTGTTGTTAGGGCCTCGGTGGTGCATTTTATGTTAGTGTGTTTTGGAGGATTTAGATTGTGTTTTGTGGGATTTTTAGTAATCATATTCTTATTTGAGACAGTCTCTTAGGGACTTTTAGGGTCACTCTGGCTCATTAAAGTTCATGTTGCTTATTGGTGGAGTTGTACTCCAGCTATTGTTTTGGGACGACAAGGCCCTCGAGCATGGACCTTTGTTTTCAATTTAATATAATATTTTACCGGAGAGAAATAAAAGAGAGGTTGAGAGTCCTCGAGGGAGGTGTGTTGGCTAGGTTCAATTGGCTCTCTTTGGATACTCATAGGATTATGACCAAGCAGTTTTGTGATTTTTCTTTTTATTTTATTCTCAATGAAGGTTCTATCTTTTGTAGTCAGGTTTTTTTTTTTTTTTTTTTTTGGGTAGATGCTCCTTTCCTAAACAATATTTTCTTTATTTCAATCTTTTCTTTTTTTCCATGTTCTTCTCAATGAATGTCTGGTTTTTATGTCTTTTATTTTTCCGTTTTCTAAAAAAGACTTATCTTTTAACAGCTGGATTTGATATTTGATAGAAGTCCTGCTTGAATATGTGTTGTATTGGGAGGGAGATGTCATGCCAAGTGTGCTACTGCAACCTTACTCGATTATTGATTGATAGTTTGAGCCTTGATATTTATTTGTCCTGCGCTAACATGCATTATAACATGTGAATTGCCCAAAAACTCTCATCTTGATACTACAGTTCAGCACAACTTGTGGTTGGTCATGCATGCTCTATCTAATAGCCCTTTCTTTATTTTCTCTTCTTTTTCGTTAGACCTTTTCAGATAATGGAAGCATAGTTCGTATTGACAGTTTGTTGGACTAACTATGAATCAAGGTGTGGTATCAGCATCATATCCTCCATATATTACCATACCCCACTACCACCATAAAAACTTCAAGACATTCAAGTCCTCAAAGGTGCTCAATGCATTAACTCTCCGTTCGCGTTTTATTCATTCTAGACGTCCTCCAATTTGTTGCACACAGACAAATCCTTGGGAACCTGCACCGGTCACATTTGCTCCCAACAATGAAGAGGATGAGACCTTCTTGAAGAAAACCGACAATATTTTTGAAAGTCTAAATGCTGATAGAACAACTGAAGTTTCGGAAGTAGAGACTAAAGAACTTGTGGAGGCAAGTAATCAACCAGAGGTGGTGCATTTGCAGATTTTCAAATGGCCAATGTGGATTTTGGGGCCTTCTCTTCTCTTAACAACAGGGATGGCCCCAACATTGTGGCTTCCTATGTCATCTGTATTTCTCGGTCCCAATGTAGCCAGCCTCCTCTCTTTGATTGGACTTGACTGCATCTATAACCTTGGTGCTATGCTTTTTCTTCTCATGGCTGATGCTTGTGCACGGCCTAAACAACCAATAAAACCCATGAGCAGTGAGGCTCCTTTCAGTTACCAATTCTGGAACATGCTTGCTAATGTGTTTGGATTTCTGATCCCTTTAGTGATGTTTTATGGATCTGAAAGTGGGTTGGTTCAACCCCATCTGCCTTTCATCCCCTTAGCAGTTCTATTGGGTCCCTATATTCTGCTCCTTTTGGTACAGATTTTGACCGAAATGCTGATATGGCACTGGCGATCCCCTGTCTGGCTGGTTACTCCAATTGTATACGAGGGTTATCGAGTTTTGCAGCTGATGAGAGGGTTGAAACTTGGGGCTGAGCTCAGTGCACCGGCCTGGATGATGCACACAATGAGAGGATTGGTTTGCTGGTGGGTGCTCATACTTGGTATTCAACTCATGAGGGTAGCTTGGTTTGCTGGTATTGCTGCCTCCCTATCTCATAAGCAGGAAATTGTCGCTAATGGTTCGTGATACTGCCAATCATCACATAAAGGTGAGTTTAGGATGACTTTTGAAAAAAAAAAAAGAGTGTTCTTAAGCAAACACACTACTTCTAGACGAAGCACAACCAAGTGCTTTACTTAATACTACTAAAACCAAGTCTAGTGTTCTTAAAACTCCAAATGATTCCAAACCTATCCTTGATAAATAGGATATATTTCTATTTTGATATGAGATTTGTACAGAATTAAAGGTCCAAGGACGTGCCTCAAATAAGTTTAGAAATAGGCATAGTACTAGATGAAAACTAGGGGGACGTAGTTGTTGTATATGCTGCCTGTTCTTATTACTCACAGAATCAGTAGTTTATGTGTATAAAAGATTGTAATATATAAAAAGAATATGATATTTTGTTCTTTGTTAGTTTGATATAAATTACAGCATAATTTTTGTTCTAA AAAGGTTAAAAGCGTAATTTCATAATAGAGAAAAAGACAAACATCTGAACTTGGGCTATTTTTCATTTGGAACCTCTGAAAAAAAATCCTCTACACAATTATTTCATCTAAAACGTATTAGTAAAAATCTCGATAATATAAAATGAAAGGGTTTTGATATTCGCTCGATTACTGTTGCCGATTTTTGAGGCAGTTGCCCTAACAGCTACCACTCGTTCAATCGGGTAAGAATTCTTATTTCTTCCCCAATTAATCGGTGGATTACATAATATTTCAATTGCTCGACCCACGCAAAAGCAACCAGCTGATTATAATTCTAACAGTTCCGATTCCATTTATCAGCTGGGTTCGCTGTTAAGACCTTTTCAGATAATGGAAGCATAGTTCGTATTGACAGTTTGTTGGACTAACTATGAATCAAGGTGTGGTATCAGCATCATATCCTCCATATATTACCATACCCCACTACCACCATAAAAACTTCAAGACATTCAAGTCCTCAAAGGTGCTCAATGCATTAACTCTCCGTTCGCGTTTTATTCATTCTAGACGTCCTCCAATTTGTTGCACACAGACAAATCCTTGGGAACCTGCACCGGTCACATTTGCTCCCAACAATGAAGAGGATGAGACCTTCTTGAAGAAAACCGACAATATTTTTGAAAGTCTAAATGCTGATAGAACAACTGAAGTTTCGGAAGTAGAGACTAAAGAACTTGTGGAGGCAAGTAATCAACCAGAGGTGGTGCATTTGCAGATTTTCAAATGGCCAATGTGGATTTTGGGGCCTTCTCTTCTCTTAACAACAGGGATGGCCCCAACATTGTGGCTTCCTATGTCATCTGTATTTCTCGGTCCCAATGTAGCCAGCCTCCTCTCTTTGATTGGACTTGACTGCATCTATAACCTTGGTGCTATGCTTTTTCTTCTCATGGCTGATGCTTGTGCACGGCCTAAACAACCAATAAAACCCATGAGCAGTGAGGCTCCTTTCAGTTACCAATTCTGGAACATGCTTGCTAATGTGTTTGGATTTCTGATCCCTTTAGTGATGTTTTATGGATCTGAAAGTGGGTTGGTTCAACCCCATCTGCCTTTCATCCCCTTAGCAGTTCTATTGGGTCCCTATATTCTGCTCCTTTTGGTACAGATTTTGACCGAAATGCTGATATGGCACTGGCGATCCCCTGTCTGGCTGGTTACTCCAATTGTATACGAGGGTTATCGAGTTTTGCAGCTGATGAGAGGGTTGAAACTTGGGGCTGAGCTCAGTGCACCGGCCTGGATGATGCACACAATGAGAGGATTGGTTTGCTGGTGGGTGCTCATACTTGGTATTCAACTCATGAGGGTAGCTTGGTTTGCTGGTATTGCTGCCTCCCTATCTCATAAGCAGGAAATTGTCGCTAATGGTTCGTGATACTGCCAATCATCACATAAAGGTGAGTTTAGGATGACTTTTGAAAAAAAAAAAAGAGTGTTCTTAAGCAAACACACTACTTCTAGACGAAGCACAACCAAGTGCTTTACTTAATACTACTAAAACCAAGTCTAGTGTTCTTAAAACTCCAAATGATTCCAAACCTATCCTTGATAAATAGGATATATTTCTATTTTGATATGAGATTTGTACAGAATTAAAGGTCCAAGGACGTGCCTCAAATAAGTTTAGAAATAGGCATAGTACTAGATGAAAACTAGGGGGACGTAGTTGTTGTATATGCTGCCTGTTCTTATTACTCACAGAATCAGTAGTTTATGTGTATAAAAGATTGTAATATATAAAAAGAATATGATATTTTGTTCTTTGTTAGTTTGATATAAATTACAGCATAATTTTTGTTCTAA ATGAATCAAGGTGTGGTATCAGCATCATATCCTCCATATATTACCATACCCCACTACCACCATAAAAACTTCAAGACATTCAAGTCCTCAAAGGTGCTCAATGCATTAACTCTCCGTTCGCGTTTTATTCATTCTAGACGTCCTCCAATTTGTTGCACACAGACAAATCCTTGGGAACCTGCACCGGTCACATTTGCTCCCAACAATGAAGAGGATGAGACCTTCTTGAAGAAAACCGACAATATTTTTGAAAGTCTAAATGCTGATAGAACAACTGAAGTTTCGGAAGTAGAGACTAAAGAACTTGTGGAGGCAAGTAATCAACCAGAGGTGGTGCATTTGCAGATTTTCAAATGGCCAATGTGGATTTTGGGGCCTTCTCTTCTCTTAACAACAGGGATGGCCCCAACATTGTGGCTTCCTATGTCATCTGTATTTCTCGGTCCCAATGTAGCCAGCCTCCTCTCTTTGATTGGACTTGACTGCATCTATAACCTTGGTGCTATGCTTTTTCTTCTCATGGCTGATGCTTGTGCACGGCCTAAACAACCAATAAAACCCATGAGCAGTGAGGCTCCTTTCAGTTACCAATTCTGGAACATGCTTGCTAATGTGTTTGGATTTCTGATCCCTTTAGTGATGTTTTATGGATCTGAAAGTGGGTTGGTTCAACCCCATCTGCCTTTCATCCCCTTAGCAGTTCTATTGGGTCCCTATATTCTGCTCCTTTTGGTACAGATTTTGACCGAAATGCTGATATGGCACTGGCGATCCCCTGTCTGGCTGGTTACTCCAATTGTATACGAGGGTTATCGAGTTTTGCAGCTGATGAGAGGGTTGAAACTTGGGGCTGAGCTCAGTGCACCGGCCTGGATGATGCACACAATGAGAGGATTGGTTTGCTGGTGGGTGCTCATACTTGGTATTCAACTCATGAGGGTAGCTTGGTTTGCTGGTATTGCTGCCTCCCTATCTCATAAGCAGGAAATTGTCGCTAATGGTTCGTGA MNQGVVSASYPPYITIPHYHHKNFKTFKSSKVLNALTLRSRFIHSRRPPICCTQTNPWEPAPVTFAPNNEEDETFLKKTDNIFESLNADRTTEVSEVETKELVEASNQPEVVHLQIFKWPMWILGPSLLLTTGMAPTLWLPMSSVFLGPNVASLLSLIGLDCIYNLGAMLFLLMADACARPKQPIKPMSSEAPFSYQFWNMLANVFGFLIPLVMFYGSESGLVQPHLPFIPLAVLLGPYILLLLVQILTEMLIWHWRSPVWLVTPIVYEGYRVLQLMRGLKLGAELSAPAWMMHTMRGLVCWWVLILGIQLMRVAWFAGIAASLSHKQEIVANGS Homology
BLAST of PI0026547.2 vs. ExPASy TrEMBL
Match: A0A0A0KKZ1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G166420 PE=4 SV=1) HSP 1 Score: 651.4 bits (1679), Expect = 2.1e-183 Identity = 323/333 (97.00%), Postives = 328/333 (98.50%), Query Frame = 0
BLAST of PI0026547.2 vs. ExPASy TrEMBL
Match: A0A1S3ASL3 (uncharacterized protein LOC103482552 OS=Cucumis melo OX=3656 GN=LOC103482552 PE=4 SV=1) HSP 1 Score: 639.8 bits (1649), Expect = 6.3e-180 Identity = 318/335 (94.93%), Postives = 325/335 (97.01%), Query Frame = 0
BLAST of PI0026547.2 vs. ExPASy TrEMBL
Match: A0A6J1E860 (uncharacterized protein LOC111430277 OS=Cucurbita moschata OX=3662 GN=LOC111430277 PE=4 SV=1) HSP 1 Score: 570.9 bits (1470), Expect = 3.6e-159 Identity = 290/343 (84.55%), Postives = 303/343 (88.34%), Query Frame = 0
BLAST of PI0026547.2 vs. ExPASy TrEMBL
Match: A0A5A7TPX8 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold1167G00020 PE=4 SV=1) HSP 1 Score: 569.3 bits (1466), Expect = 1.1e-158 Identity = 282/293 (96.25%), Postives = 289/293 (98.63%), Query Frame = 0
BLAST of PI0026547.2 vs. ExPASy TrEMBL
Match: A0A6J1IA45 (uncharacterized protein LOC111471494 OS=Cucurbita maxima OX=3661 GN=LOC111471494 PE=4 SV=1) HSP 1 Score: 568.5 bits (1464), Expect = 1.8e-158 Identity = 291/351 (82.91%), Postives = 303/351 (86.32%), Query Frame = 0
BLAST of PI0026547.2 vs. NCBI nr
Match: XP_004152380.1 (uncharacterized protein LOC101219687 [Cucumis sativus] >XP_011654828.1 uncharacterized protein LOC101219687 [Cucumis sativus] >KGN50298.1 hypothetical protein Csa_000500 [Cucumis sativus]) HSP 1 Score: 651.4 bits (1679), Expect = 4.3e-183 Identity = 323/333 (97.00%), Postives = 328/333 (98.50%), Query Frame = 0
BLAST of PI0026547.2 vs. NCBI nr
Match: XP_008436987.1 (PREDICTED: uncharacterized protein LOC103482552 [Cucumis melo] >XP_008436989.1 PREDICTED: uncharacterized protein LOC103482552 [Cucumis melo]) HSP 1 Score: 639.8 bits (1649), Expect = 1.3e-179 Identity = 318/335 (94.93%), Postives = 325/335 (97.01%), Query Frame = 0
BLAST of PI0026547.2 vs. NCBI nr
Match: XP_038875766.1 (uncharacterized protein LOC120068138 [Benincasa hispida] >XP_038875767.1 uncharacterized protein LOC120068138 [Benincasa hispida] >XP_038875768.1 uncharacterized protein LOC120068138 [Benincasa hispida] >XP_038875769.1 uncharacterized protein LOC120068138 [Benincasa hispida]) HSP 1 Score: 610.1 bits (1572), Expect = 1.1e-170 Identity = 306/336 (91.07%), Postives = 318/336 (94.64%), Query Frame = 0
BLAST of PI0026547.2 vs. NCBI nr
Match: XP_022922235.1 (uncharacterized protein LOC111430277 [Cucurbita moschata]) HSP 1 Score: 570.9 bits (1470), Expect = 7.5e-159 Identity = 290/343 (84.55%), Postives = 303/343 (88.34%), Query Frame = 0
BLAST of PI0026547.2 vs. NCBI nr
Match: XP_023551281.1 (uncharacterized protein LOC111809147 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 569.7 bits (1467), Expect = 1.7e-158 Identity = 289/343 (84.26%), Postives = 303/343 (88.34%), Query Frame = 0
BLAST of PI0026547.2 vs. TAIR 10
Match: AT3G60590.3 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G48460.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). ) HSP 1 Score: 333.6 bits (854), Expect = 1.9e-91 Identity = 176/333 (52.85%), Postives = 229/333 (68.77%), Query Frame = 0
BLAST of PI0026547.2 vs. TAIR 10
Match: AT3G60590.2 (unknown protein; LOCATED IN: chloroplast, chloroplast inner membrane, chloroplast envelope; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G48460.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). ) HSP 1 Score: 333.6 bits (854), Expect = 1.9e-91 Identity = 176/333 (52.85%), Postives = 229/333 (68.77%), Query Frame = 0
BLAST of PI0026547.2 vs. TAIR 10
Match: AT3G60590.1 (unknown protein; LOCATED IN: chloroplast, chloroplast inner membrane, chloroplast envelope; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G48460.1); Has 81 Blast hits to 81 proteins in 19 species: Archae - 0; Bacteria - 10; Metazoa - 0; Fungi - 0; Plants - 70; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). ) HSP 1 Score: 309.3 bits (791), Expect = 3.8e-84 Identity = 145/219 (66.21%), Postives = 184/219 (84.02%), Query Frame = 0
BLAST of PI0026547.2 vs. TAIR 10
Match: AT3G60590.4 (unknown protein; LOCATED IN: chloroplast inner membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G48460.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). ) HSP 1 Score: 309.3 bits (791), Expect = 3.8e-84 Identity = 145/219 (66.21%), Postives = 184/219 (84.02%), Query Frame = 0
BLAST of PI0026547.2 vs. TAIR 10
Match: AT5G63040.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G48460.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). ) HSP 1 Score: 43.5 bits (101), Expect = 3.9e-04 Identity = 46/175 (26.29%), Postives = 83/175 (47.43%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
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