PI0025379.1 (mRNA) Melon (PI 482460) v1

Overview


Name	PI0025379.1
Type	mRNA
Organism	Cucumis metuliferus (Melon (PI 482460) v1)
Description	Unknown protein
Location	chr09: 11988841 .. 11990069 (-)
Sequence length	444
RNA-Seq Expression	PI0025379.1
Synteny	PI0025379.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGACAATCTGTTTATAATCAACCATAAACAAAGTCCCTCTCTTGTTCTTGAGAGGGTGGGGCCTCTTGTAACGCCGCGAAATTTGGGAAGTTTTGGAGGTAATTTGAGTTTTTGGGAGTTAATAATATAAATATATAATAATAATAATAATAATAGTTTTATTATTATTATTAATATTATTAATATTATTATTATTATTATTTCTTTTTTTTAAAAAAAAAGAGAAATCAGAAAAAAAAGGGAGAAGGTCGAAACCCCCCTCCTTTTTCTTCTTGAGCCCACCGAAACCCCCCCCATCTTTTTCTTTCTTTCTTCCTTCCAGCCCAGCCGTCCGCCCAGCTCCCCACGCCGCCTGTCCTCCGCGCTGCCTAGCTCCCTCGCGTCGCCTGCCGTCCGCGCCGCCAGCTCCGCCCAGTCGTCCGAGCCGCCCAGTCCGCGCAAAGGGTTCCTTTTCGCGCCGCCAGCAACAGTTCCGCGCCGTTCGTCCCGCCGCCGGCCAGATCTGTGCCGCCCTCACCCTTCCAGCTGCATTCTCAACATTTTTAGTGAGTTTTGCGCCGGTTTTTTTTCTCGATTTAGAACCCCCTTTGTAGATTTTGGTTTAGATTAAAGCTAAGAAGTAATTTATGATTTTTTTGGATTGAAGTTTGTGTGGTTTTGTTGAAGGTGTCGTTGTTTTTCTCGCCTCGCGCTCGTTTTGGTTCATTTGGATTTGGGCATTTTGGAGCCCAAATTCCATTTTGATTTTTGGGTAAGTGTTATTGAAGTTTATGTGATTTTTGTTGGGTTGAGTTGAGAAATTGATTGGATGTTGGTTACTTTTTTGCTTAGGATTCTTCTTGGCTCGTTGGTACCTTTCGGTTAGCTCGGTGAAGGTAAGTGCCTTTTCTACCGGACTAGCGAACTATTGATGCTTTGCTTAATTGATTTGAGGATTGGTTGCATTGAGGATTTTGGAACGTTGTTGACTAATTTGATTGTCTGGAATGTTGGTATATTTCTCTGATGAATGGATGTTCTGTTATTAGTTTAATTTGAGCCTTAGAATAACCAAAGTTTAACTGTACGAAGCTTTATTATTGAGATTTGATGTTCTGGACTATGTAGACTGGTATGTTCCTTATAGACTGGTTTTCTACCGGATTGACTGTTATGTCTTTAAAAACTTTGATTTTTTTTTTAACTTTGTATTAGTTAAATGATCGTTTTGTATTTCGTTGTTTTTAA

mRNA sequence

ATGGACAATCTGTTTATAATCAACCATAAACAAAGTCCCTCTCTTGTTCTTGAGAGGGTGGGGCCTCTTGTAACGCCGCGAAATTTGGGAAGTTTTGGAGCCGTCCGCCCAGCTCCCCACGCCGCCTGTCCTCCGCGCTGCCTAGCTCCCTCGCGTCGCCTGCCGTCCGCGCCGCCAGCTCCGCCCAGTCGTCCGAGCCGCCCAGTCCGCGCAAAGGGTTCCTTTTCGCGCCGCCAGCAACAGTTCCGCGCCGTTCGTCCCGCCGCCGGCCAGATCTGTGCCGCCCTCACCCTTCCAGCTGCATTCTCAACATTTTTAGTGAGTTTTGCGCCGGTGTCGTTGTTTTTCTCGCCTCGCGCTCGTTTTGGATTCTTCTTGGCTCGTTGGTACCTTTCGGTTAGCTCGGTGAAGTTAAATGATCGTTTTGTATTTCGTTGTTTTTAA

Coding sequence (CDS)

ATGGACAATCTGTTTATAATCAACCATAAACAAAGTCCCTCTCTTGTTCTTGAGAGGGTGGGGCCTCTTGTAACGCCGCGAAATTTGGGAAGTTTTGGAGCCGTCCGCCCAGCTCCCCACGCCGCCTGTCCTCCGCGCTGCCTAGCTCCCTCGCGTCGCCTGCCGTCCGCGCCGCCAGCTCCGCCCAGTCGTCCGAGCCGCCCAGTCCGCGCAAAGGGTTCCTTTTCGCGCCGCCAGCAACAGTTCCGCGCCGTTCGTCCCGCCGCCGGCCAGATCTGTGCCGCCCTCACCCTTCCAGCTGCATTCTCAACATTTTTAGTGAGTTTTGCGCCGGTGTCGTTGTTTTTCTCGCCTCGCGCTCGTTTTGGATTCTTCTTGGCTCGTTGGTACCTTTCGGTTAGCTCGGTGAAGTTAAATGATCGTTTTGTATTTCGTTGTTTTTAA

Protein sequence

MDNLFIINHKQSPSLVLERVGPLVTPRNLGSFGAVRPAPHAACPPRCLAPSRRLPSAPPAPPSRPSRPVRAKGSFSRRQQQFRAVRPAAGQICAALTLPAAFSTFLVSFAPVSLFFSPRARFGFFLARWYLSVSSVKLNDRFVFRCF

Homology

The following BLAST results are available for this feature:

BLAST of PI0025379.1 vs.


Match Name	E-value	Identity	Description

BLAST of PI0025379.1 vs.


Match Name	E-value	Identity	Description

BLAST of PI0025379.1 vs.


Match Name	E-value	Identity	Description

BLAST of PI0025379.1 vs.


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 49..75
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 51..66

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
PI0025379	PI0025379	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
PI0025379.1-exon	PI0025379.1-exon-chr09:11988841..11988873	exon
PI0025379.1-exon	PI0025379.1-exon-chr09:11989193..11989236	exon
PI0025379.1-exon	PI0025379.1-exon-chr09:11989368..11989401	exon
PI0025379.1-exon	PI0025379.1-exon-chr09:11989508..11989740	exon
PI0025379.1-exon	PI0025379.1-exon-chr09:11989970..11990069	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
PI0025379.1-cds	PI0025379.1-cds-chr09:11988841..11988873	CDS
PI0025379.1-cds	PI0025379.1-cds-chr09:11989193..11989236	CDS
PI0025379.1-cds	PI0025379.1-cds-chr09:11989368..11989401	CDS
PI0025379.1-cds	PI0025379.1-cds-chr09:11989508..11989740	CDS
PI0025379.1-cds	PI0025379.1-cds-chr09:11989970..11990069	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
PI0025379.1	PI0025379.1-protein	polypeptide