Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGACTTAACTCAACCCGATAACGATGATAAGGAGAACGAGGAAGAAGCTCCTCATTTGACAAAGACCATAGGATCAAAGATGGTAAATGATACAGATAATTTCGCCAAGTCAAGTATCGAGAGAGAGATTAGGGAAACATCACCTTCTCTTGACCCACTTCACCACAATAACGTGGATTGTGAGGAAGCTGCTACTCCACTTCCATCTTCTCATGTCAATGAGATTATTCATCATCAGTCTAGAAGACCACAAACTAAGCCATTAGACTCAGCTGCTGCTCGTACTAGATCAGCGGTTCGTAAATTACCCGTTGAAGAGGTTCAATCTCAGTCGGAGGAAAATGTGGTGGAAGTTGATACCCAAAAAGTGGACCCTAAAAAGACAAAATGTCGGACGAAGATGCAAACAATAGCGGTGGAGCCAGAAATGAAACTAAGTATAAGGTACAACGAATATGGACAACCTATTGGAGAAACATCAGTTGGGTTGTCCTCATTTTTGGGTTCACTTGTCAGAGAAGTGGTGTCAGTGAATGTTGAAACTTGGAAGAAACTTTCAACGAGACAAAAAGAAATATTGTGA
mRNA sequence
ATGGACTTAACTCAACCCGATAACGATGATAAGGAGAACGAGGAAGAAGCTCCTCATTTGACAAAGACCATAGGATCAAAGATGGTAAATGATACAGATAATTTCGCCAAGTCAAGTATCGAGAGAGAGATTAGGGAAACATCACCTTCTCTTGACCCACTTCACCACAATAACGTGGATTGTGAGGAAGCTGCTACTCCACTTCCATCTTCTCATGTCAATGAGATTATTCATCATCAGTCTAGAAGACCACAAACTAAGCCATTAGACTCAGCTGCTGCTCGTACTAGATCAGCGGTTCGTAAATTACCCGTTGAAGAGGTTCAATCTCAGTCGGAGGAAAATGTGGTGGAAGTTGATACCCAAAAAGTGGACCCTAAAAAGACAAAATGTCGGACGAAGATGCAAACAATAGCGGTGGAGCCAGAAATGAAACTAAGTATAAGGTACAACGAATATGGACAACCTATTGGAGAAACATCAGTTGGGTTGTCCTCATTTTTGGGTTCACTTGTCAGAGAAGTGGTGTCAGTGAATGTTGAAACTTGGAAGAAACTTTCAACGAGACAAAAAGAAATATTGTGA
Coding sequence (CDS)
ATGGACTTAACTCAACCCGATAACGATGATAAGGAGAACGAGGAAGAAGCTCCTCATTTGACAAAGACCATAGGATCAAAGATGGTAAATGATACAGATAATTTCGCCAAGTCAAGTATCGAGAGAGAGATTAGGGAAACATCACCTTCTCTTGACCCACTTCACCACAATAACGTGGATTGTGAGGAAGCTGCTACTCCACTTCCATCTTCTCATGTCAATGAGATTATTCATCATCAGTCTAGAAGACCACAAACTAAGCCATTAGACTCAGCTGCTGCTCGTACTAGATCAGCGGTTCGTAAATTACCCGTTGAAGAGGTTCAATCTCAGTCGGAGGAAAATGTGGTGGAAGTTGATACCCAAAAAGTGGACCCTAAAAAGACAAAATGTCGGACGAAGATGCAAACAATAGCGGTGGAGCCAGAAATGAAACTAAGTATAAGGTACAACGAATATGGACAACCTATTGGAGAAACATCAGTTGGGTTGTCCTCATTTTTGGGTTCACTTGTCAGAGAAGTGGTGTCAGTGAATGTTGAAACTTGGAAGAAACTTTCAACGAGACAAAAAGAAATATTGTGA
Protein sequence
MDLTQPDNDDKENEEEAPHLTKTIGSKMVNDTDNFAKSSIEREIRETSPSLDPLHHNNVDCEEAATPLPSSHVNEIIHHQSRRPQTKPLDSAAARTRSAVRKLPVEEVQSQSEENVVEVDTQKVDPKKTKCRTKMQTIAVEPEMKLSIRYNEYGQPIGETSVGLSSFLGSLVREVVSVNVETWKKLSTRQKEIL
Homology
BLAST of PI0023461.1 vs. ExPASy TrEMBL
Match:
A0A5A7UBP2 (Plant transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold2606G00210 PE=4 SV=1)
HSP 1 Score: 222.6 bits (566), Expect = 1.4e-54
Identity = 133/198 (67.17%), Postives = 143/198 (72.22%), Query Frame = 0
Query: 1 MDLTQPDNDDKENEEEAPHLTKTIGSKMVNDTDNFAKSSIEREIRETSPSLDPLHHNNVD 60
MDLTQP DD+ENE EA HL E+EIRETSP DPL
Sbjct: 1 MDLTQPSTDDEENEGEALHLR-------------------EKEIRETSPLPDPLP----- 60
Query: 61 CEEAATPLPSSHVNEIIHHQSRRPQTKPLDSAAARTRSAVRKLPVEEVQSQSEEN----V 120
EEA TPLPSSHVN IH QSRRP +PLDS A RTRSAVRKLPVEEV+SQ EEN
Sbjct: 61 -EEATTPLPSSHVNATIHPQSRRPPNRPLDSPAGRTRSAVRKLPVEEVESQLEENENVDC 120
Query: 121 VEVDTQKVDPKKTKCRTKMQTIAVEPEMKLSIRYNEYGQPIGETSVGLSSFLGSLVREVV 180
EV T++ PKKT+ RTKMQTIA+EPEMKL IRYN YGQPIGETSVGLSSFLG+LVREVV
Sbjct: 121 EEVHTKEPSPKKTRGRTKMQTIAMEPEMKLDIRYNGYGQPIGETSVGLSSFLGTLVREVV 173
Query: 181 SVNVETWKKLSTRQKEIL 195
VNVETWKK+STRQKEIL
Sbjct: 181 PVNVETWKKISTRQKEIL 173
BLAST of PI0023461.1 vs. ExPASy TrEMBL
Match:
A0A5A7SRN7 (Plant transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold219G00120 PE=4 SV=1)
HSP 1 Score: 222.6 bits (566), Expect = 1.4e-54
Identity = 133/198 (67.17%), Postives = 143/198 (72.22%), Query Frame = 0
Query: 1 MDLTQPDNDDKENEEEAPHLTKTIGSKMVNDTDNFAKSSIEREIRETSPSLDPLHHNNVD 60
MDLTQP DD+ENE EA HL E+EIRETSP DPL
Sbjct: 1 MDLTQPSTDDEENEGEALHLR-------------------EKEIRETSPLPDPLP----- 60
Query: 61 CEEAATPLPSSHVNEIIHHQSRRPQTKPLDSAAARTRSAVRKLPVEEVQSQSEEN----V 120
EEA TPLPSSHVN IH QSRRP +PLDS A RTRSAVRKLPVEEV+SQ EEN
Sbjct: 61 -EEATTPLPSSHVNATIHPQSRRPPNRPLDSPAGRTRSAVRKLPVEEVESQLEENENVDC 120
Query: 121 VEVDTQKVDPKKTKCRTKMQTIAVEPEMKLSIRYNEYGQPIGETSVGLSSFLGSLVREVV 180
EV T++ PKKT+ RTKMQTIA+EPEMKL IRYN YGQPIGETSVGLSSFLG+LVREVV
Sbjct: 121 EEVHTKEPSPKKTRGRTKMQTIAMEPEMKLDIRYNGYGQPIGETSVGLSSFLGTLVREVV 173
Query: 181 SVNVETWKKLSTRQKEIL 195
VNVETWKK+STRQKEIL
Sbjct: 181 PVNVETWKKISTRQKEIL 173
BLAST of PI0023461.1 vs. ExPASy TrEMBL
Match:
A0A5A7TIU1 (Plant transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold128G002550 PE=4 SV=1)
HSP 1 Score: 218.0 bits (554), Expect = 3.4e-53
Identity = 130/198 (65.66%), Postives = 142/198 (71.72%), Query Frame = 0
Query: 1 MDLTQPDNDDKENEEEAPHLTKTIGSKMVNDTDNFAKSSIEREIRETSPSLDPLHHNNVD 60
MDLTQP DD+ENE EA HL E+EIRETSP DPL
Sbjct: 1 MDLTQPSTDDEENEGEALHLR-------------------EKEIRETSPLPDPLP----- 60
Query: 61 CEEAATPLPSSHVNEIIHHQSRRPQTKPLDSAAARTRSAVRKLPVEEVQSQSEEN----V 120
EEA TPLPSSHVN IH QS+RP +PLDS A TRSAVRKLPVEEV+SQ EEN
Sbjct: 61 -EEATTPLPSSHVNATIHPQSKRPPNRPLDSPAGCTRSAVRKLPVEEVESQLEENENVDC 120
Query: 121 VEVDTQKVDPKKTKCRTKMQTIAVEPEMKLSIRYNEYGQPIGETSVGLSSFLGSLVREVV 180
EV T++ PKKT+ RTKMQTIA+EPEMKL IRYN YGQPIGETSVGLSSFLG+LVREVV
Sbjct: 121 EEVHTKEPSPKKTRGRTKMQTIAMEPEMKLDIRYNGYGQPIGETSVGLSSFLGTLVREVV 173
Query: 181 SVNVETWKKLSTRQKEIL 195
VN+ETWKK+STRQKEIL
Sbjct: 181 PVNIETWKKISTRQKEIL 173
BLAST of PI0023461.1 vs. ExPASy TrEMBL
Match:
A0A5A7TLJ2 (Plant transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold44G003690 PE=4 SV=1)
HSP 1 Score: 217.6 bits (553), Expect = 4.5e-53
Identity = 130/198 (65.66%), Postives = 141/198 (71.21%), Query Frame = 0
Query: 1 MDLTQPDNDDKENEEEAPHLTKTIGSKMVNDTDNFAKSSIEREIRETSPSLDPLHHNNVD 60
MDLTQP DD+ENE EA HL E+EIRETSP DPL
Sbjct: 1 MDLTQPSTDDEENEGEALHLR-------------------EKEIRETSPLPDPLP----- 60
Query: 61 CEEAATPLPSSHVNEIIHHQSRRPQTKPLDSAAARTRSAVRKLPVEEVQSQSEEN----V 120
EEA TPLPSSHVN IH QSR+P +PLDS A RTR VRKLPVEEV+SQ EEN
Sbjct: 61 -EEATTPLPSSHVNATIHPQSRKPPNRPLDSPAGRTRLVVRKLPVEEVESQLEENENVDC 120
Query: 121 VEVDTQKVDPKKTKCRTKMQTIAVEPEMKLSIRYNEYGQPIGETSVGLSSFLGSLVREVV 180
EV T++ PKKT+ RTKMQTIA+EPEMKL IRYN YGQPIGETSVGLSSFLG+LVREVV
Sbjct: 121 EEVHTKEPSPKKTRGRTKMQTIAMEPEMKLDIRYNGYGQPIGETSVGLSSFLGTLVREVV 173
Query: 181 SVNVETWKKLSTRQKEIL 195
VNVETWKK+STRQKEIL
Sbjct: 181 PVNVETWKKISTRQKEIL 173
BLAST of PI0023461.1 vs. ExPASy TrEMBL
Match:
A0A5A7UNU1 (Transposase_23 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold226G00350 PE=4 SV=1)
HSP 1 Score: 215.3 bits (547), Expect = 2.2e-52
Identity = 130/198 (65.66%), Postives = 140/198 (70.71%), Query Frame = 0
Query: 1 MDLTQPDNDDKENEEEAPHLTKTIGSKMVNDTDNFAKSSIEREIRETSPSLDPLHHNNVD 60
MDLTQP DD+ENE EA HL E+EIRETSP DPL
Sbjct: 1 MDLTQPSTDDEENEGEALHLR-------------------EKEIRETSPLPDPL------ 60
Query: 61 CEEAATPLPSSHVNEIIHHQSRRPQTKPLDSAAARTRSAVRKLPVEEVQSQSEEN----V 120
EEA TPLPSSHVN IH QSRRP +PLDS A RTRSAVRKL VEEV+SQ EEN
Sbjct: 61 LEEATTPLPSSHVNATIHPQSRRPPNRPLDSPAGRTRSAVRKLLVEEVESQLEENENVDC 120
Query: 121 VEVDTQKVDPKKTKCRTKMQTIAVEPEMKLSIRYNEYGQPIGETSVGLSSFLGSLVREVV 180
EV T++ PKKT+ RTKMQTIA+EPEMKL IRYN YGQPIGETSVGLSSFLG+L REVV
Sbjct: 121 EEVHTKEPSPKKTRGRTKMQTIAMEPEMKLDIRYNGYGQPIGETSVGLSSFLGTLFREVV 173
Query: 181 SVNVETWKKLSTRQKEIL 195
VNV TWKK+STRQKEIL
Sbjct: 181 PVNVATWKKISTRQKEIL 173
BLAST of PI0023461.1 vs. NCBI nr
Match:
KAA0032201.1 (Plant transposase [Cucumis melo var. makuwa])
HSP 1 Score: 222.6 bits (566), Expect = 2.9e-54
Identity = 133/198 (67.17%), Postives = 143/198 (72.22%), Query Frame = 0
Query: 1 MDLTQPDNDDKENEEEAPHLTKTIGSKMVNDTDNFAKSSIEREIRETSPSLDPLHHNNVD 60
MDLTQP DD+ENE EA HL E+EIRETSP DPL
Sbjct: 1 MDLTQPSTDDEENEGEALHLR-------------------EKEIRETSPLPDPLP----- 60
Query: 61 CEEAATPLPSSHVNEIIHHQSRRPQTKPLDSAAARTRSAVRKLPVEEVQSQSEEN----V 120
EEA TPLPSSHVN IH QSRRP +PLDS A RTRSAVRKLPVEEV+SQ EEN
Sbjct: 61 -EEATTPLPSSHVNATIHPQSRRPPNRPLDSPAGRTRSAVRKLPVEEVESQLEENENVDC 120
Query: 121 VEVDTQKVDPKKTKCRTKMQTIAVEPEMKLSIRYNEYGQPIGETSVGLSSFLGSLVREVV 180
EV T++ PKKT+ RTKMQTIA+EPEMKL IRYN YGQPIGETSVGLSSFLG+LVREVV
Sbjct: 121 EEVHTKEPSPKKTRGRTKMQTIAMEPEMKLDIRYNGYGQPIGETSVGLSSFLGTLVREVV 173
Query: 181 SVNVETWKKLSTRQKEIL 195
VNVETWKK+STRQKEIL
Sbjct: 181 PVNVETWKKISTRQKEIL 173
BLAST of PI0023461.1 vs. NCBI nr
Match:
KAA0051001.1 (Plant transposase [Cucumis melo var. makuwa])
HSP 1 Score: 222.6 bits (566), Expect = 2.9e-54
Identity = 133/198 (67.17%), Postives = 143/198 (72.22%), Query Frame = 0
Query: 1 MDLTQPDNDDKENEEEAPHLTKTIGSKMVNDTDNFAKSSIEREIRETSPSLDPLHHNNVD 60
MDLTQP DD+ENE EA HL E+EIRETSP DPL
Sbjct: 1 MDLTQPSTDDEENEGEALHLR-------------------EKEIRETSPLPDPLP----- 60
Query: 61 CEEAATPLPSSHVNEIIHHQSRRPQTKPLDSAAARTRSAVRKLPVEEVQSQSEEN----V 120
EEA TPLPSSHVN IH QSRRP +PLDS A RTRSAVRKLPVEEV+SQ EEN
Sbjct: 61 -EEATTPLPSSHVNATIHPQSRRPPNRPLDSPAGRTRSAVRKLPVEEVESQLEENENVDC 120
Query: 121 VEVDTQKVDPKKTKCRTKMQTIAVEPEMKLSIRYNEYGQPIGETSVGLSSFLGSLVREVV 180
EV T++ PKKT+ RTKMQTIA+EPEMKL IRYN YGQPIGETSVGLSSFLG+LVREVV
Sbjct: 121 EEVHTKEPSPKKTRGRTKMQTIAMEPEMKLDIRYNGYGQPIGETSVGLSSFLGTLVREVV 173
Query: 181 SVNVETWKKLSTRQKEIL 195
VNVETWKK+STRQKEIL
Sbjct: 181 PVNVETWKKISTRQKEIL 173
BLAST of PI0023461.1 vs. NCBI nr
Match:
KAA0041269.1 (Plant transposase [Cucumis melo var. makuwa])
HSP 1 Score: 218.0 bits (554), Expect = 7.1e-53
Identity = 130/198 (65.66%), Postives = 142/198 (71.72%), Query Frame = 0
Query: 1 MDLTQPDNDDKENEEEAPHLTKTIGSKMVNDTDNFAKSSIEREIRETSPSLDPLHHNNVD 60
MDLTQP DD+ENE EA HL E+EIRETSP DPL
Sbjct: 1 MDLTQPSTDDEENEGEALHLR-------------------EKEIRETSPLPDPLP----- 60
Query: 61 CEEAATPLPSSHVNEIIHHQSRRPQTKPLDSAAARTRSAVRKLPVEEVQSQSEEN----V 120
EEA TPLPSSHVN IH QS+RP +PLDS A TRSAVRKLPVEEV+SQ EEN
Sbjct: 61 -EEATTPLPSSHVNATIHPQSKRPPNRPLDSPAGCTRSAVRKLPVEEVESQLEENENVDC 120
Query: 121 VEVDTQKVDPKKTKCRTKMQTIAVEPEMKLSIRYNEYGQPIGETSVGLSSFLGSLVREVV 180
EV T++ PKKT+ RTKMQTIA+EPEMKL IRYN YGQPIGETSVGLSSFLG+LVREVV
Sbjct: 121 EEVHTKEPSPKKTRGRTKMQTIAMEPEMKLDIRYNGYGQPIGETSVGLSSFLGTLVREVV 173
Query: 181 SVNVETWKKLSTRQKEIL 195
VN+ETWKK+STRQKEIL
Sbjct: 181 PVNIETWKKISTRQKEIL 173
BLAST of PI0023461.1 vs. NCBI nr
Match:
KAA0042856.1 (Plant transposase [Cucumis melo var. makuwa])
HSP 1 Score: 217.6 bits (553), Expect = 9.3e-53
Identity = 130/198 (65.66%), Postives = 141/198 (71.21%), Query Frame = 0
Query: 1 MDLTQPDNDDKENEEEAPHLTKTIGSKMVNDTDNFAKSSIEREIRETSPSLDPLHHNNVD 60
MDLTQP DD+ENE EA HL E+EIRETSP DPL
Sbjct: 1 MDLTQPSTDDEENEGEALHLR-------------------EKEIRETSPLPDPLP----- 60
Query: 61 CEEAATPLPSSHVNEIIHHQSRRPQTKPLDSAAARTRSAVRKLPVEEVQSQSEEN----V 120
EEA TPLPSSHVN IH QSR+P +PLDS A RTR VRKLPVEEV+SQ EEN
Sbjct: 61 -EEATTPLPSSHVNATIHPQSRKPPNRPLDSPAGRTRLVVRKLPVEEVESQLEENENVDC 120
Query: 121 VEVDTQKVDPKKTKCRTKMQTIAVEPEMKLSIRYNEYGQPIGETSVGLSSFLGSLVREVV 180
EV T++ PKKT+ RTKMQTIA+EPEMKL IRYN YGQPIGETSVGLSSFLG+LVREVV
Sbjct: 121 EEVHTKEPSPKKTRGRTKMQTIAMEPEMKLDIRYNGYGQPIGETSVGLSSFLGTLVREVV 173
Query: 181 SVNVETWKKLSTRQKEIL 195
VNVETWKK+STRQKEIL
Sbjct: 181 PVNVETWKKISTRQKEIL 173
BLAST of PI0023461.1 vs. NCBI nr
Match:
KAA0056267.1 (uncharacterized protein E6C27_scaffold226G00350 [Cucumis melo var. makuwa])
HSP 1 Score: 215.3 bits (547), Expect = 4.6e-52
Identity = 130/198 (65.66%), Postives = 140/198 (70.71%), Query Frame = 0
Query: 1 MDLTQPDNDDKENEEEAPHLTKTIGSKMVNDTDNFAKSSIEREIRETSPSLDPLHHNNVD 60
MDLTQP DD+ENE EA HL E+EIRETSP DPL
Sbjct: 1 MDLTQPSTDDEENEGEALHLR-------------------EKEIRETSPLPDPL------ 60
Query: 61 CEEAATPLPSSHVNEIIHHQSRRPQTKPLDSAAARTRSAVRKLPVEEVQSQSEEN----V 120
EEA TPLPSSHVN IH QSRRP +PLDS A RTRSAVRKL VEEV+SQ EEN
Sbjct: 61 LEEATTPLPSSHVNATIHPQSRRPPNRPLDSPAGRTRSAVRKLLVEEVESQLEENENVDC 120
Query: 121 VEVDTQKVDPKKTKCRTKMQTIAVEPEMKLSIRYNEYGQPIGETSVGLSSFLGSLVREVV 180
EV T++ PKKT+ RTKMQTIA+EPEMKL IRYN YGQPIGETSVGLSSFLG+L REVV
Sbjct: 121 EEVHTKEPSPKKTRGRTKMQTIAMEPEMKLDIRYNGYGQPIGETSVGLSSFLGTLFREVV 173
Query: 181 SVNVETWKKLSTRQKEIL 195
VNV TWKK+STRQKEIL
Sbjct: 181 PVNVATWKKISTRQKEIL 173
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A5A7UBP2 | 1.4e-54 | 67.17 | Plant transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold2606G0... | [more] |
A0A5A7SRN7 | 1.4e-54 | 67.17 | Plant transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold219G00... | [more] |
A0A5A7TIU1 | 3.4e-53 | 65.66 | Plant transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold128G00... | [more] |
A0A5A7TLJ2 | 4.5e-53 | 65.66 | Plant transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold44G003... | [more] |
A0A5A7UNU1 | 2.2e-52 | 65.66 | Transposase_23 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 ... | [more] |
Match Name | E-value | Identity | Description | |