PI0022280.1 (mRNA) Melon (PI 482460) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGTTCGCGGACCTGAGCAAACAAGTGGCGGAGCTCCCTGCGAAGTTTAAGGCTTTAGAGCTAGAGAAAGACCTCGAGGTCATTGCTGAAGAACTCGAGGATGAGCTGGAGGCGATGAGCCCAATTGAGCAAGGGCCATCGCCTAAAAACCAAAGGGAGGTCGCCGAGCCATCAGAAGGGAAAAAGAAAATTGGGGACTCTGGACCTGAAGAGCACCCAACAGGCTGCGAAGCCAAAGCGAAAACACCCTCAATCAACTCACTCATAAAGGTTGAGAAAGGGTTGTTTCCATTTAATGGCCCCCTCCCAGGCTTCCTCTACGCGCCTATCCAGGCGTTTGGCTGGAAGAAATTTTTTAGGGGCACACCAAGTTAAGAATGGGTGTGGTGGAAAATATTTACGCCGCTAAGCTCAATGTTGAGGAGTTTAGCGTAGAAATCAGTGGAAGGACGGTGAGCTTCAACGAGGAGGCCATTAACGATCTATATGGTTTGCCCAACGACGTTGAGACGCCTGGGCATGAATACGTTATCAGTCGAACCAAAAAAATGGCCCGTGAAGCGTTAAAAGTCATCGCCTGACCGAGGGCCGCATGGGAAATTACGCCGACGGGGAAATATCAACTTTATCCACACCAGCTGACCACAGAGGCAAGTGTGTGGCTCTTCTTCATCAACTTAGAGTCAGCGATGCTGCTTTACTGCATAATGACGAAGAAGCGCATCAACCTCAGCGATCTAATAGCTACATCCATCATGTCTTGGATGCAAGCTCCTAAGGGCGCCATGCCCTTCCCATCCACAGTTGAAGCCCTCTGCGTGAAGGTTGTGCCTTTTCTATGCGCCATGAACACAATGCCAATTCCAGGCGGCCTATGCAATCAGATGTCTTTGAATTGTATGATCACCTTCCATGCCCACAAAGAAATGGAAAGGCGGTCAAAGACATTGGGTGACACAGCAAGTGAAGGCGCAACCCAAGCAGATCGCAAACGCAAAGCCCCAACCACCGTATCAACTCCTCAACCAAAAGTCAAAAAACCAAAAGTTGATGCGACGAGCCAACCCCAGCCACTTAAAATCATCCATCCATCTTCCCGCCTAGTCAAGAGAACTCCCTCTAAAATCCAAAGAGATTCCAGCCACTCTCAACCGCCTAGCCACTCTTTGCCTATTCCATCACGTCAACCTTCACCCATCATATCCCCCATCATTCACTACTCCCCCACATTTTATCACCCATCCACGCACCCAACCTATCTCCCCGCACTCGTACCCCTCCGCCCACAAAAACAACAACTTCCATCCTTCCTCCAAATAAACCTTCCCCTAGGCGAGCTGACACATTATCGCCTCTTATTCTATCACCCATATTAG ATGTTCGCGGACCTGAGCAAACAAGTGGCGGAGCTCCCTGCGAAGTTTAAGGCTTTAGAGCTAGAGAAAGACCTCGAGGTCATTGCTGAAGAACTCGAGGATGAGCTGGAGGCGATGAGCCCAATTGAGCAAGGGCCATCGCCTAAAAACCAAAGGGAGGTCGCCGAGCCATCAGAAGGGAAAAAGAAAATTGGGGACTCTGGACCTGAAGAGCACCCAACAGGCTGCGAAGCCAAAGCGAAAACACCCTCAATCAACTCACTCATAAAGGGGCACACCAAGTTAAGAATGGGTGTGGTGGAAAATATTTACGCCGCTAAGCTCAATGTTGAGGAGTTTAGCGTAGAAATCAGTGGAAGGACGGTGAGCTTCAACGAGGAGGCCATTAACGATCTATATGGTTTGCCCAACGACGTTGAGACGCCTGGGCATGAATACGTTATCAGTCGAACCAAAAAAATGGCCCGTGAAGCGTTAAAACTGACCACAGAGGCAAGTGTGTGGCTCTTCTTCATCAACTTAGAGTCAGCGATGCTGCTTTACTGCATAATGACGAAGAAGCGCATCAACCTCAGCGATCTAATAGCTACATCCATCATGTCTTGGATGCAAGCTCCTAAGGGCGCCATGCCCTTCCCATCCACAGTTGAAGCCCTCTGCGTGAAGGTTGTGCCTTTTCTATGCGCCATGAACACAATGCCAATTCCAGGCGGCCTATGCAATCAGATGTCTTTGAATTGTATGATCACCTTCCATGCCCACAAAGAAATGGAAAGGCGGTCAAAGACATTGGGTGACACAGCAAGTGAAGGCGCAACCCAAGCAGATCGCAAACGCAAAGCCCCAACCACCGTATCAACTCCTCAACCAAAAGTCAAAAAACCAAAAGTTGATGCGACGAGCCAACCCCAGCCACTTAAAATCATCCATCCATCTTCCCGCCTAGTCAAGAGAACTCCCTCTAAAATCCAAAGAGATTCCAGCCACTCTCAACCGCCTAGCCACTCTTTGCCTATTCCATCACGTCAACCTTCACCCATCATATCCCCCATCATTCACTACTCCCCCACATTTTATCACCCATCCACGCACCCAACCTATCTCCCCGCACTCGTACCCCTCCGCCCACAAAAACAACAACTTCCATCCTTCCTCCAAATAAACCTTCCCCTAGGCGAGCTGACACATTATCGCCTCTTATTCTATCACCCATATTAG ATGTTCGCGGACCTGAGCAAACAAGTGGCGGAGCTCCCTGCGAAGTTTAAGGCTTTAGAGCTAGAGAAAGACCTCGAGGTCATTGCTGAAGAACTCGAGGATGAGCTGGAGGCGATGAGCCCAATTGAGCAAGGGCCATCGCCTAAAAACCAAAGGGAGGTCGCCGAGCCATCAGAAGGGAAAAAGAAAATTGGGGACTCTGGACCTGAAGAGCACCCAACAGGCTGCGAAGCCAAAGCGAAAACACCCTCAATCAACTCACTCATAAAGGGGCACACCAAGTTAAGAATGGGTGTGGTGGAAAATATTTACGCCGCTAAGCTCAATGTTGAGGAGTTTAGCGTAGAAATCAGTGGAAGGACGGTGAGCTTCAACGAGGAGGCCATTAACGATCTATATGGTTTGCCCAACGACGTTGAGACGCCTGGGCATGAATACGTTATCAGTCGAACCAAAAAAATGGCCCGTGAAGCGTTAAAACTGACCACAGAGGCAAGTGTGTGGCTCTTCTTCATCAACTTAGAGTCAGCGATGCTGCTTTACTGCATAATGACGAAGAAGCGCATCAACCTCAGCGATCTAATAGCTACATCCATCATGTCTTGGATGCAAGCTCCTAAGGGCGCCATGCCCTTCCCATCCACAGTTGAAGCCCTCTGCGTGAAGGTTGTGCCTTTTCTATGCGCCATGAACACAATGCCAATTCCAGGCGGCCTATGCAATCAGATGTCTTTGAATTGTATGATCACCTTCCATGCCCACAAAGAAATGGAAAGGCGGTCAAAGACATTGGGTGACACAGCAAGTGAAGGCGCAACCCAAGCAGATCGCAAACGCAAAGCCCCAACCACCGTATCAACTCCTCAACCAAAAGTCAAAAAACCAAAAGTTGATGCGACGAGCCAACCCCAGCCACTTAAAATCATCCATCCATCTTCCCGCCTAGTCAAGAGAACTCCCTCTAAAATCCAAAGAGATTCCAGCCACTCTCAACCGCCTAGCCACTCTTTGCCTATTCCATCACGTCAACCTTCACCCATCATATCCCCCATCATTCACTACTCCCCCACATTTTATCACCCATCCACGCACCCAACCTATCTCCCCGCACTCGTACCCCTCCGCCCACAAAAACAACAACTTCCATCCTTCCTCCAAATAAACCTTCCCCTAGGCGAGCTGACACATTATCGCCTCTTATTCTATCACCCATATTAG MFADLSKQVAELPAKFKALELEKDLEVIAEELEDELEAMSPIEQGPSPKNQREVAEPSEGKKKIGDSGPEEHPTGCEAKAKTPSINSLIKGHTKLRMGVVENIYAAKLNVEEFSVEISGRTVSFNEEAINDLYGLPNDVETPGHEYVISRTKKMAREALKLTTEASVWLFFINLESAMLLYCIMTKKRINLSDLIATSIMSWMQAPKGAMPFPSTVEALCVKVVPFLCAMNTMPIPGGLCNQMSLNCMITFHAHKEMERRSKTLGDTASEGATQADRKRKAPTTVSTPQPKVKKPKVDATSQPQPLKIIHPSSRLVKRTPSKIQRDSSHSQPPSHSLPIPSRQPSPIISPIIHYSPTFYHPSTHPTYLPALVPLRPQKQQLPSFLQINLPLGELTHYRLLFYHPY Homology
BLAST of PI0022280.1 vs. ExPASy TrEMBL
Match: A0A5A7V6M5 (Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold683G00020 PE=4 SV=1) HSP 1 Score: 117.1 bits (292), Expect = 1.7e-22 Identity = 69/179 (38.55%), Postives = 92/179 (51.40%), Query Frame = 0
BLAST of PI0022280.1 vs. ExPASy TrEMBL
Match: A0A5D3C3P6 (Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold6952G00010 PE=4 SV=1) HSP 1 Score: 95.9 bits (237), Expect = 4.1e-16 Identity = 56/145 (38.62%), Postives = 76/145 (52.41%), Query Frame = 0
BLAST of PI0022280.1 vs. ExPASy TrEMBL
Match: A0A5A7SLS8 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold409G00080 PE=4 SV=1) HSP 1 Score: 94.7 bits (234), Expect = 9.2e-16 Identity = 67/172 (38.95%), Postives = 93/172 (54.07%), Query Frame = 0
BLAST of PI0022280.1 vs. ExPASy TrEMBL
Match: A0A5A7V6C0 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold381G00540 PE=4 SV=1) HSP 1 Score: 86.7 bits (213), Expect = 2.5e-13 Identity = 54/188 (28.72%), Postives = 92/188 (48.94%), Query Frame = 0
BLAST of PI0022280.1 vs. ExPASy TrEMBL
Match: A0A5A7UUR1 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold279G00010 PE=4 SV=1) HSP 1 Score: 86.3 bits (212), Expect = 3.3e-13 Identity = 67/187 (35.83%), Postives = 95/187 (50.80%), Query Frame = 0
BLAST of PI0022280.1 vs. NCBI nr
Match: KAA0062900.1 (gag/pol protein [Cucumis melo var. makuwa]) HSP 1 Score: 117.1 bits (292), Expect = 3.6e-22 Identity = 69/179 (38.55%), Postives = 92/179 (51.40%), Query Frame = 0
BLAST of PI0022280.1 vs. NCBI nr
Match: TYK05842.1 (gag/pol protein [Cucumis melo var. makuwa]) HSP 1 Score: 95.9 bits (237), Expect = 8.5e-16 Identity = 56/145 (38.62%), Postives = 76/145 (52.41%), Query Frame = 0
BLAST of PI0022280.1 vs. NCBI nr
Match: KAA0031700.1 (hypothetical protein E6C27_scaffold139G004840 [Cucumis melo var. makuwa] >TYK04412.1 hypothetical protein E5676_scaffold409G00080 [Cucumis melo var. makuwa]) HSP 1 Score: 94.7 bits (234), Expect = 1.9e-15 Identity = 67/172 (38.95%), Postives = 93/172 (54.07%), Query Frame = 0
BLAST of PI0022280.1 vs. NCBI nr
Match: KAA0063168.1 (hypothetical protein E6C27_scaffold381G00540 [Cucumis melo var. makuwa]) HSP 1 Score: 86.7 bits (213), Expect = 5.2e-13 Identity = 54/188 (28.72%), Postives = 92/188 (48.94%), Query Frame = 0
BLAST of PI0022280.1 vs. NCBI nr
Match: KAA0057279.1 (hypothetical protein E6C27_scaffold280G001200 [Cucumis melo var. makuwa] >TYK27636.1 hypothetical protein E5676_scaffold279G00010 [Cucumis melo var. makuwa]) HSP 1 Score: 86.3 bits (212), Expect = 6.7e-13 Identity = 67/187 (35.83%), Postives = 95/187 (50.80%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
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