PI0021351.1 (mRNA) Melon (PI 482460) v1

Overview


Name	PI0021351.1
Type	mRNA
Organism	Cucumis metuliferus (Melon (PI 482460) v1)
Description	Kinetochore protein SPC25
Location	chr02: 24489771 .. 24492530 (+)
Sequence length	1546
RNA-Seq Expression	PI0021351.1
Synteny	PI0021351.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CGTCCGTCGATATTCTCCAGAAAAATAATTTAATTTTGAAGCTTGAAGCAAATTTGGCGGGCGAACGAGTGTACAGCAACTCCTTTGCTCTGTGAGAGAATGGAGAACAAGGCGACTGATTCTGTTCATGCAAGGTTGGAAAAACTTCGAATCGTTCGTGAAAATGAAATTCCAGTTCAGCAGCAAAAGATGGAGTCCTTCGCGGATTCATTTTGCAAATCAGTGGAATCGATCAATGTAAGGTCCCGAGCAAATGCCCTAAGCCAAGGTGAGCTATGTATTTTCTTCAATTTACTTGGGAAAGAAATGGGTGTGAAACTTGTTACTGTGGCCACTTACGACACTGTAATCGGTATTAGAATTGTTTGTGAAGTGACCATTAGGGTTTTTGAAATGGGTAGCGATTAGGACTCAGAACGGATGTAATTCTTGGGAATTGAGTTGGAGTTGGTTCAGAAGTGGCAAAGTTTACTTCGAAATTTCTTGTTTCATTTTTTTTTGTTTATTTGTTTATATATATTTTTCGAATTCTCAGGGAAACTGGGGGAACTAAAAGCGAGACTGAGGGAGGCGGAAGATGAACTGGTTAAAGCTCTTGCAGGTATGAGCTATGATTATGCTACTTTCCTTCGACGCTGTATGAGTTAGAATATACTACTTCGTTGAAGAGTGAATCGACTTGAAGTGGCATTTAAGAGTTGGGTTATTTTTCCACTTAAATTGTTGAGGATCTTTTCCAACGGAAGTGTTTTGGATTTGGAGTGAGTGATCGGCGAAATGTTGGTGTTTGTGATGCTGGTATATTGTTTCTTACTTAAAATTAGCGCTTGTCGTAAGGGCTTATTTCCTTTATACTTGCATATTTTTGTAGTGAAGACTCGTAAAGAGGCCAAACGCCTCACAATCATCGACTCAATTGCAACTTCAAAATCCAGAATAGAAGAGCTCAGGAATACCTTACAAGACTGCAAAGCAAGGAGGGATGAATATGCTACAATTATTTCTCAGCAATCCTTAGGTAATGTCTGTAAATCTGATTTATTTTCTTTCAGACCCAATTTCCCTTTATGCGAACAGAAAACTGCACATGGACTGAAGGTAAAGTCATTGTTAACAAGTTGGATATGCATTGTTCAATCTTTATTTGCTACTTACTTCCAAGATCTTTTCCACAATTCTTTTGCAAACCTCAACTTTAGAAGTTCCATGGGATAACTGATTACTTCTCTCTCTGTCCAATGCTATCAAAAGCTTTATCTTCATCTGAACGCAAGGAAACCCAGGAGAGCGAATGCAGAAATGAAATACAAGAGGCAATTTCTTGGTACAAAAGGGTTCTTGATTTTCATATTGAAGGAGGATATGGTATGATAATTCAAGTTTTTTTTTTTTTTTTGAGAATCTCTACAGCTTTTGGGAAGCTTGAGATAAATTTGTTGACAACTTCTCTCGGCATTTCAGGGGTGAAATTCTCTTTCAAGAAAATTAATATAGACAATCCTGATGAAGAATATTCTTTCACAATTCGTCATGCAAATGATACTTATATGTGTAAGTTTTATCATATGTGCACTTAATATACGTTGATTTTTCTTGCTCATTATCTTCTGACAACCTGTAACTTTTTCCTTAACTTTTTAGTGTTAGATTGTAACCCATCCTTGCCAGATATTAAGGAGTTGATACATGAATTAAATAAAACAAATGGTTTATTCAAGCTCGTCAGGATCATGAGACAGAGATTCCAGGAGGCTGCAGCAGAAGGTGTGCCCTGAGTTTTTAACTTTTTGCTTGAAAGGTATTTTTCCACTAAATGGTTGTTATATTTTTGTTATTCAACAGGAGCTGGGGCTCCAGCATTGTCTCTGCATCAAGGTTCAACGATAATCTCTATGTCAGCTCCAGGCTTGTCATCATCAAGTGAGAGAAGTGAATCTTCAACTGAAGAAATTAACAAGGATGAAGTTGAGGAAACTAACAAACATTCTAAGAACATTTTACCCAGAAAGAAACCGGCTATCCACTCCAGTGGATCTGCGTTTTCTTTGCGTCGATCTCCTCGTTTTAAGGTATGTTCAATTTTAATGTTTGATATCTGCTGCTTTTGATTTAGGATTCTCAGGTATATGATACTAAGAGAATACTATAAGTCTATAACTTCTATGTATAACAGGTTGATCTTTTTCTAAAGCACATTTCAAATTGTTATGCAAGAGAGAATTACTAATAAAATGCACCTTGTATGGCAGGTCAGGAAATAAGGTTGGAGGCTGTTAATGGTTGAACAATTATTAGGTTAATGGGCTTAGCCTTTTGCTTCCATGACATGAATTGCTTTGCAATTAACGTTGATTATGCCAATATGGGGTCCTGATCTCAACATTTGCCAGAACTTCTCTGACTATTCTGAAGAGTCCATATCATAAAAGCGAAGTTGAAGAAGACTTTATCACATGACCTGTTGGATGTTCGTTGTATCTGATTTTTTTTTATGTGTATTATTTTACACGAAGTCGTGGTTTTCATGTAATGCATGGGGTGATTATTCCAAATGTACTGGATAACAGTACTTTGTATCAATTTGATCTATATGCTAGGTTTCACATCATCGGACTTAAATTAATGTTTGTGCAGTTTTAAATTAATTAATTGCAAAAGCTTGAAGGTGAAAGTTCACTTCTCTATGAAATTAAGTTAGTATATAACGATGTAATTTACATTCTTTAAATAGTAGGTTCTCTTTCATTGTTTCGTTTTCAA

mRNA sequence

CGTCCGTCGATATTCTCCAGAAAAATAATTTAATTTTGAAGCTTGAAGCAAATTTGGCGGGCGAACGAGTGTACAGCAACTCCTTTGCTCTGTGAGAGAATGGAGAACAAGGCGACTGATTCTGTTCATGCAAGGTTGGAAAAACTTCGAATCGTTCGTGAAAATGAAATTCCAGTTCAGCAGCAAAAGATGGAGTCCTTCGCGGATTCATTTTGCAAATCAGTGGAATCGATCAATGTAAGGTCCCGAGCAAATGCCCTAAGCCAAGGGAAACTGGGGGAACTAAAAGCGAGACTGAGGGAGGCGGAAGATGAACTGGTTAAAGCTCTTGCAGTGAAGACTCGTAAAGAGGCCAAACGCCTCACAATCATCGACTCAATTGCAACTTCAAAATCCAGAATAGAAGAGCTCAGGAATACCTTACAAGACTGCAAAGCAAGGAGGGATGAATATGCTACAATTATTTCTCAGCAATCCTTAGCTTTATCTTCATCTGAACGCAAGGAAACCCAGGAGAGCGAATGCAGAAATGAAATACAAGAGGCAATTTCTTGGTACAAAAGGGTTCTTGATTTTCATATTGAAGGAGGATATGGGGTGAAATTCTCTTTCAAGAAAATTAATATAGACAATCCTGATGAAGAATATTCTTTCACAATTCGTCATGCAAATGATACTTATATGTTGTTAGATTGTAACCCATCCTTGCCAGATATTAAGGAGTTGATACATGAATTAAATAAAACAAATGGTTTATTCAAGCTCGTCAGGATCATGAGACAGAGATTCCAGGAGGCTGCAGCAGAAGGAGCTGGGGCTCCAGCATTGTCTCTGCATCAAGGTTCAACGATAATCTCTATGTCAGCTCCAGGCTTGTCATCATCAAGTGAGAGAAGTGAATCTTCAACTGAAGAAATTAACAAGGATGAAGTTGAGGAAACTAACAAACATTCTAAGAACATTTTACCCAGAAAGAAACCGGCTATCCACTCCAGTGGATCTGCGTTTTCTTTGCGTCGATCTCCTCGTTTTAAGGTCAGGAAATAAGGTTGGAGGCTGTTAATGGTTGAACAATTATTAGGTTAATGGGCTTAGCCTTTTGCTTCCATGACATGAATTGCTTTGCAATTAACGTTGATTATGCCAATATGGGGTCCTGATCTCAACATTTGCCAGAACTTCTCTGACTATTCTGAAGAGTCCATATCATAAAAGCGAAGTTGAAGAAGACTTTATCACATGACCTGTTGGATGTTCGTTGTATCTGATTTTTTTTTATGTGTATTATTTTACACGAAGTCGTGGTTTTCATGTAATGCATGGGGTGATTATTCCAAATGTACTGGATAACAGTACTTTGTATCAATTTGATCTATATGCTAGGTTTCACATCATCGGACTTAAATTAATGTTTGTGCAGTTTTAAATTAATTAATTGCAAAAGCTTGAAGGTGAAAGTTCACTTCTCTATGAAATTAAGTTAGTATATAACGATGTAATTTACATTCTTTAAATAGTAGGTTCTCTTTCATTGTTTCGTTTTCAA

Coding sequence (CDS)

ATGGAGAACAAGGCGACTGATTCTGTTCATGCAAGGTTGGAAAAACTTCGAATCGTTCGTGAAAATGAAATTCCAGTTCAGCAGCAAAAGATGGAGTCCTTCGCGGATTCATTTTGCAAATCAGTGGAATCGATCAATGTAAGGTCCCGAGCAAATGCCCTAAGCCAAGGGAAACTGGGGGAACTAAAAGCGAGACTGAGGGAGGCGGAAGATGAACTGGTTAAAGCTCTTGCAGTGAAGACTCGTAAAGAGGCCAAACGCCTCACAATCATCGACTCAATTGCAACTTCAAAATCCAGAATAGAAGAGCTCAGGAATACCTTACAAGACTGCAAAGCAAGGAGGGATGAATATGCTACAATTATTTCTCAGCAATCCTTAGCTTTATCTTCATCTGAACGCAAGGAAACCCAGGAGAGCGAATGCAGAAATGAAATACAAGAGGCAATTTCTTGGTACAAAAGGGTTCTTGATTTTCATATTGAAGGAGGATATGGGGTGAAATTCTCTTTCAAGAAAATTAATATAGACAATCCTGATGAAGAATATTCTTTCACAATTCGTCATGCAAATGATACTTATATGTTGTTAGATTGTAACCCATCCTTGCCAGATATTAAGGAGTTGATACATGAATTAAATAAAACAAATGGTTTATTCAAGCTCGTCAGGATCATGAGACAGAGATTCCAGGAGGCTGCAGCAGAAGGAGCTGGGGCTCCAGCATTGTCTCTGCATCAAGGTTCAACGATAATCTCTATGTCAGCTCCAGGCTTGTCATCATCAAGTGAGAGAAGTGAATCTTCAACTGAAGAAATTAACAAGGATGAAGTTGAGGAAACTAACAAACATTCTAAGAACATTTTACCCAGAAAGAAACCGGCTATCCACTCCAGTGGATCTGCGTTTTCTTTGCGTCGATCTCCTCGTTTTAAGGTCAGGAAATAA

Protein sequence

MENKATDSVHARLEKLRIVRENEIPVQQQKMESFADSFCKSVESINVRSRANALSQGKLGELKARLREAEDELVKALAVKTRKEAKRLTIIDSIATSKSRIEELRNTLQDCKARRDEYATIISQQSLALSSSERKETQESECRNEIQEAISWYKRVLDFHIEGGYGVKFSFKKINIDNPDEEYSFTIRHANDTYMLLDCNPSLPDIKELIHELNKTNGLFKLVRIMRQRFQEAAAEGAGAPALSLHQGSTIISMSAPGLSSSSERSESSTEEINKDEVEETNKHSKNILPRKKPAIHSSGSAFSLRRSPRFKVRK

Homology

[Close]

BLAST of PI0021351.1 vs. ExPASy Swiss-Prot
Match: Q93VK9 (Kinetochore protein SPC25 homolog OS=Arabidopsis thaliana OX=3702 GN=SPC25 PE=1 SV=1)

HSP 1 Score: 200.3 bits (508), Expect = 3.3e-50
Identity = 132/310 (42.58%), Postives = 192/310 (61.94%), Query Frame = 0


Query: 7   DSVHARLEKLRIVRENEIPVQQQKMESF-ADSFCKSVESINVRSRANALSQGKLGELKAR 66
           D+    +  L ++ E +I  Q+ K++SF A  F +S+ S+  R++A A SQ +L  LKA 
Sbjct: 11  DTTKETMASLGLICEKDIHEQRLKIDSFIASPFRRSMNSLVERAQATAQSQVELMNLKAD 70

Query: 67  LREAEDELVKALAVKTRKEAKRLTIIDSIATSKSRIEELRNTLQDCKARRDEYATIISQQ 126
           LREAEDELVK LAVKTRKEA+++ I DSI+ ++SRIE LR  LQ  K+++D+   IISQQ
Sbjct: 71  LREAEDELVKVLAVKTRKEARQMGIRDSISATQSRIEVLRRNLQLQKSKKDDSVRIISQQ 130

Query: 127 SLALSSSERKETQESECRNEIQEAISWYKRVLDFHIEGGYGVKFSFKKINIDNPDEEYSF 186
             ALS S+    + +E + +I EAISWY   L FH+E G+GVKF+F  I+   P  E+SF
Sbjct: 131 LQALSKSKDNAGKVTEDKADIHEAISWYNHALGFHVEAGHGVKFTFTNIDAKRPTREFSF 190

Query: 187 TIRHANDTYMLLDCNPSLPDIKELIHELNKTNGLFKLVRIMRQRFQEAAAEGAGAPALSL 246
           T+ + ND Y LLD +  L  I E++ ELNKTN LF+ VR+MR++F ++        +  L
Sbjct: 191 TVHYGNDIYTLLDSDLQLDYINEMVQELNKTNDLFRFVRLMREQFLKSTLSELPTHSGQL 250

Query: 247 HQGSTIISMSAPGLSSSSERSESSTEEINKDEVEETNKHSKNILPRKKPAIHSSGSAFSL 306
            Q ++ IS SAP +S S++ + S+ E  NK    + N+  K      +  + +  S  + 
Sbjct: 251 QQETSAISASAPAISFSTDTNMSTPE--NKRSKVQVNRRQKR---GSESPLLAPVSTSAT 310

Query: 307 RRSPRFKVRK 316
           RRS RFK +K
Sbjct: 311 RRSSRFKGKK 315

[Close]

BLAST of PI0021351.1 vs. ExPASy TrEMBL
Match: A0A1S3CM71 (Kinetochore protein SPC25 OS=Cucumis melo OX=3656 GN=LOC103502389 PE=3 SV=1)

HSP 1 Score: 564.3 bits (1453), Expect = 3.2e-157
Identity = 303/315 (96.19%), Postives = 309/315 (98.10%), Query Frame = 0


Query: 1   MENKATDSVHARLEKLRIVRENEIPVQQQKMESFADSFCKSVESINVRSRANALSQGKLG 60
           ME KATDSV ARLEKLRIVRENEIPVQQQKMESFADSFCKSVESI+VRSRANALSQGKLG
Sbjct: 1   MEIKATDSVRARLEKLRIVRENEIPVQQQKMESFADSFCKSVESISVRSRANALSQGKLG 60

Query: 61  ELKARLREAEDELVKALAVKTRKEAKRLTIIDSIATSKSRIEELRNTLQDCKARRDEYAT 120
           ELKARLR AEDELVKALAVKTRKEAKRLTIIDSIATSKSRIEELRNTLQDCKARRDEYAT
Sbjct: 61  ELKARLRVAEDELVKALAVKTRKEAKRLTIIDSIATSKSRIEELRNTLQDCKARRDEYAT 120

Query: 121 IISQQSLALSSSERKETQESECRNEIQEAISWYKRVLDFHIEGGYGVKFSFKKINIDNPD 180
           IISQQSL LSSSERKETQESECRNEIQEAISWYKRVLDFHIEGGYGVKFSFKKINIDNPD
Sbjct: 121 IISQQSLVLSSSERKETQESECRNEIQEAISWYKRVLDFHIEGGYGVKFSFKKINIDNPD 180

Query: 181 EEYSFTIRHANDTYMLLDCNPSLPDIKELIHELNKTNGLFKLVRIMRQRFQEAAAEGAGA 240
           EEYSFTIRHANDTYMLLDCNPSLPDIKELIHELNKTNGLFKLVRIMR+RFQEAAAEG+GA
Sbjct: 181 EEYSFTIRHANDTYMLLDCNPSLPDIKELIHELNKTNGLFKLVRIMRRRFQEAAAEGSGA 240

Query: 241 PALSLHQGSTIISMSAPGLSSSSERSESSTEEINKDEVEETNKHSKNILPRKKPAIHSSG 300
           PALSLHQGS+IIS SAPGLSSS+ERS+SSTEEIN DEVEETNKHSKNILPRKKPAIHSSG
Sbjct: 241 PALSLHQGSSIISTSAPGLSSSTERSDSSTEEINMDEVEETNKHSKNILPRKKPAIHSSG 300

Query: 301 SAFSLRRSPRFKVRK 316
           SAFSLRRSPRFKVRK
Sbjct: 301 SAFSLRRSPRFKVRK 315

[Close]

BLAST of PI0021351.1 vs. ExPASy TrEMBL
Match: A0A0A0LU84 (Kinetochore protein SPC25 OS=Cucumis sativus OX=3659 GN=Csa_1G004230 PE=3 SV=1)

HSP 1 Score: 549.7 bits (1415), Expect = 8.1e-153
Identity = 297/315 (94.29%), Postives = 303/315 (96.19%), Query Frame = 0


Query: 1   MENKATDSVHARLEKLRIVRENEIPVQQQKMESFADSFCKSVESINVRSRANALSQGKLG 60
           MENKA DSV ARLEKLRI+RENEIPVQQQKMESFADSF KSVESI+VRSRANALSQGKLG
Sbjct: 1   MENKANDSVRARLEKLRILRENEIPVQQQKMESFADSFYKSVESISVRSRANALSQGKLG 60

Query: 61  ELKARLREAEDELVKALAVKTRKEAKRLTIIDSIATSKSRIEELRNTLQDCKARRDEYAT 120
           ELKARLRE EDELVKALAVKTRKEAKRLTIIDSIATSKSR EELRNTLQDCKARRDEYAT
Sbjct: 61  ELKARLRETEDELVKALAVKTRKEAKRLTIIDSIATSKSRTEELRNTLQDCKARRDEYAT 120

Query: 121 IISQQSLALSSSERKETQESECRNEIQEAISWYKRVLDFHIEGGYGVKFSFKKINIDNPD 180
           IISQQSL LSSSERKETQESECRNEIQEAISWYKRVLDFHIEGGYGVKFSFKKINIDNPD
Sbjct: 121 IISQQSLVLSSSERKETQESECRNEIQEAISWYKRVLDFHIEGGYGVKFSFKKINIDNPD 180

Query: 181 EEYSFTIRHANDTYMLLDCNPSLPDIKELIHELNKTNGLFKLVRIMRQRFQEAAAEGAGA 240
           EEYSFTIRHANDTYMLLDCNPSL DIKELIHELNKTNGLFKLVRIMR+RFQEAAAEGAGA
Sbjct: 181 EEYSFTIRHANDTYMLLDCNPSLSDIKELIHELNKTNGLFKLVRIMRRRFQEAAAEGAGA 240

Query: 241 PALSLHQGSTIISMSAPGLSSSSERSESSTEEINKDEVEETNKHSKNILPRKKPAIHSSG 300
           PALSLHQGS++IS SAP LSSS+E SESSTEEIN DEVEETNKHSKNILPRK PAIHSSG
Sbjct: 241 PALSLHQGSSVISTSAPVLSSSTEGSESSTEEINIDEVEETNKHSKNILPRKNPAIHSSG 300

Query: 301 SAFSLRRSPRFKVRK 316
           SAFSLRRSPRFKVRK
Sbjct: 301 SAFSLRRSPRFKVRK 315

[Close]

BLAST of PI0021351.1 vs. ExPASy TrEMBL
Match: A0A5D3BFE9 (Kinetochore protein SPC25 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold350G001250 PE=3 SV=1)

HSP 1 Score: 537.0 bits (1382), Expect = 5.4e-149
Identity = 301/364 (82.69%), Postives = 307/364 (84.34%), Query Frame = 0


Query: 1   MENKATDSVHARLEKLRIVRENEIPVQQQKMESFADSFCKSVESINVRSRANALSQG--- 60
           ME KATDSV ARLEKLRIVRENEIPVQQQKMESFADSFCKSVESI+VRSRANALSQG   
Sbjct: 1   MEIKATDSVRARLEKLRIVRENEIPVQQQKMESFADSFCKSVESISVRSRANALSQGELS 60

Query: 61  ------------------------------------------------KLGELKARLREA 120
                                                           KLGELKARLR A
Sbjct: 61  IFFILFGKEMGVKLVTVATYDTVIDIRMVCEVTIRVLKWVAIKTQNGWKLGELKARLRVA 120

Query: 121 EDELVKALAVKTRKEAKRLTIIDSIATSKSRIEELRNTLQDCKARRDEYATIISQQSLAL 180
           EDELVKALAVKTRKEAKRLTIIDSIATSKSRIEELRNTLQDCKARRDEYATIISQQSL L
Sbjct: 121 EDELVKALAVKTRKEAKRLTIIDSIATSKSRIEELRNTLQDCKARRDEYATIISQQSLVL 180

Query: 181 SSSERKETQESECRNEIQEAISWYKRVLDFHIEGGYGVKFSFKKINIDNPDEEYSFTIRH 240
           SSSERKETQESECRNEIQEAISWYKRVLDFHIEGGYGVKFSFKKINIDNPDEEYSFTIRH
Sbjct: 181 SSSERKETQESECRNEIQEAISWYKRVLDFHIEGGYGVKFSFKKINIDNPDEEYSFTIRH 240

Query: 241 ANDTYMLLDCNPSLPDIKELIHELNKTNGLFKLVRIMRQRFQEAAAEGAGAPALSLHQGS 300
           ANDTYMLLDCNPSLPDIKELIHELNKTNGLFKLVRIMR+RFQEAAAEG+GAPALSLHQGS
Sbjct: 241 ANDTYMLLDCNPSLPDIKELIHELNKTNGLFKLVRIMRRRFQEAAAEGSGAPALSLHQGS 300

Query: 301 TIISMSAPGLSSSSERSESSTEEINKDEVEETNKHSKNILPRKKPAIHSSGSAFSLRRSP 314
           +IIS SAPGLSSS+ERS+SSTEEIN DEVEETNKHSKNILPRKKPAIHSSGSAFSLRRSP
Sbjct: 301 SIISTSAPGLSSSTERSDSSTEEINMDEVEETNKHSKNILPRKKPAIHSSGSAFSLRRSP 360

[Close]

BLAST of PI0021351.1 vs. ExPASy TrEMBL
Match: A0A5A7UUK0 (Kinetochore protein SPC25 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold274G001230 PE=3 SV=1)

HSP 1 Score: 535.4 bits (1378), Expect = 1.6e-148
Identity = 300/364 (82.42%), Postives = 306/364 (84.07%), Query Frame = 0


Query: 1   MENKATDSVHARLEKLRIVRENEIPVQQQKMESFADSFCKSVESINVRSRANALSQG--- 60
           ME KATDSV ARLEKLRIVRENEIPVQQQKMESFADSFCKSVESI+VRSRANALSQG   
Sbjct: 1   MEIKATDSVRARLEKLRIVRENEIPVQQQKMESFADSFCKSVESISVRSRANALSQGELS 60

Query: 61  ------------------------------------------------KLGELKARLREA 120
                                                           KLGELKARLR A
Sbjct: 61  IFFILFGKEMGVKLVTVATYDTVIDIRMVCEVTIRVLKWVAIKTQNGWKLGELKARLRVA 120

Query: 121 EDELVKALAVKTRKEAKRLTIIDSIATSKSRIEELRNTLQDCKARRDEYATIISQQSLAL 180
           EDELVK LAVKTRKEAKRLTIIDSIATSKSRIEELRNTLQDCKARRDEYATIISQQSL L
Sbjct: 121 EDELVKTLAVKTRKEAKRLTIIDSIATSKSRIEELRNTLQDCKARRDEYATIISQQSLVL 180

Query: 181 SSSERKETQESECRNEIQEAISWYKRVLDFHIEGGYGVKFSFKKINIDNPDEEYSFTIRH 240
           SSSERKETQESECRNEIQEAISWYKRVLDFHIEGGYGVKFSFKKINIDNPDEEYSFTIRH
Sbjct: 181 SSSERKETQESECRNEIQEAISWYKRVLDFHIEGGYGVKFSFKKINIDNPDEEYSFTIRH 240

Query: 241 ANDTYMLLDCNPSLPDIKELIHELNKTNGLFKLVRIMRQRFQEAAAEGAGAPALSLHQGS 300
           ANDTYMLLDCNPSLPDIKELIHELNKTNGLFKLVRIMR+RFQEAAAEG+GAPALSLHQGS
Sbjct: 241 ANDTYMLLDCNPSLPDIKELIHELNKTNGLFKLVRIMRRRFQEAAAEGSGAPALSLHQGS 300

Query: 301 TIISMSAPGLSSSSERSESSTEEINKDEVEETNKHSKNILPRKKPAIHSSGSAFSLRRSP 314
           +IIS SAPGLSSS+ERS+SSTEEIN DEVEETNKHSKNILPRKKPAIHSSGSAFSLRRSP
Sbjct: 301 SIISTSAPGLSSSTERSDSSTEEINMDEVEETNKHSKNILPRKKPAIHSSGSAFSLRRSP 360

[Close]

BLAST of PI0021351.1 vs. ExPASy TrEMBL
Match: A0A6J1BYG5 (Kinetochore protein SPC25 OS=Momordica charantia OX=3673 GN=LOC111006883 PE=3 SV=1)

HSP 1 Score: 482.3 bits (1240), Expect = 1.6e-132
Identity = 262/316 (82.91%), Postives = 285/316 (90.19%), Query Frame = 0


Query: 1   MENKATDSVHARLEKLRIVRENEIPVQQQKMESFADSFCKSVESINVRSRANALSQGKLG 60
           MENK  DS+  ++E LR+VRE EIPVQQQKMESFADSF KS+ESI VRSR NALSQGKLG
Sbjct: 1   MENKVEDSIRVKMESLRMVREKEIPVQQQKMESFADSFRKSLESITVRSRENALSQGKLG 60

Query: 61  ELKARLREAEDELVKALAVKTRKEAKRLTIIDSIATSKSRIEELRNTLQDCKARRDEYAT 120
           ELKARLREAEDELVKALAVKTRKEAKRL I DS+A SKSRIEELRNTLQDCKA+RDEY+T
Sbjct: 61  ELKARLREAEDELVKALAVKTRKEAKRLAITDSLAASKSRIEELRNTLQDCKAKRDEYST 120

Query: 121 IISQQSLALSSSERKETQESECRNEIQEAISWYKRVLDFHIEGGYGVKFSFKKINIDNPD 180
           IISQQSLALSSSE KETQES+CR+EIQEAISWY RVLDFHIEGG GVKFSFKKINI+ PD
Sbjct: 121 IISQQSLALSSSEHKETQESDCRSEIQEAISWYNRVLDFHIEGGRGVKFSFKKININIPD 180

Query: 181 EEYSFTIRHANDTYMLLDCNPSLPDIKELIHELNKTNGLFKLVRIMRQRFQEAAAEGAGA 240
           +EYSFTIRHA+DTY LLDCNPSL DI++LIHELNKTNGLFK VR+MRQRFQE AAEG GA
Sbjct: 181 KEYSFTIRHASDTYTLLDCNPSLQDIQDLIHELNKTNGLFKFVRVMRQRFQEIAAEGVGA 240

Query: 241 PALSLHQGSTIISMSAPGLSSSSERSESSTEEI-NKDEVEETNKHSKNILPRKKPAIHSS 300
            ALSLHQ STIIS+SAPGLSSS++RSESST+EI N+  +EETNKHSK IL  KKPA+ S 
Sbjct: 241 QALSLHQDSTIISVSAPGLSSSTDRSESSTQEIDNQVRLEETNKHSKKILSGKKPAVLSP 300

Query: 301 GSAFSLRRSPRFKVRK 316
           GSAFSLRRSPRFKVRK
Sbjct: 301 GSAFSLRRSPRFKVRK 316

[Close]

BLAST of PI0021351.1 vs. NCBI nr
Match: XP_008464538.1 (PREDICTED: probable kinetochore protein SPC25 [Cucumis melo])

HSP 1 Score: 564.3 bits (1453), Expect = 6.6e-157
Identity = 303/315 (96.19%), Postives = 309/315 (98.10%), Query Frame = 0


Query: 1   MENKATDSVHARLEKLRIVRENEIPVQQQKMESFADSFCKSVESINVRSRANALSQGKLG 60
           ME KATDSV ARLEKLRIVRENEIPVQQQKMESFADSFCKSVESI+VRSRANALSQGKLG
Sbjct: 1   MEIKATDSVRARLEKLRIVRENEIPVQQQKMESFADSFCKSVESISVRSRANALSQGKLG 60

Query: 61  ELKARLREAEDELVKALAVKTRKEAKRLTIIDSIATSKSRIEELRNTLQDCKARRDEYAT 120
           ELKARLR AEDELVKALAVKTRKEAKRLTIIDSIATSKSRIEELRNTLQDCKARRDEYAT
Sbjct: 61  ELKARLRVAEDELVKALAVKTRKEAKRLTIIDSIATSKSRIEELRNTLQDCKARRDEYAT 120

Query: 121 IISQQSLALSSSERKETQESECRNEIQEAISWYKRVLDFHIEGGYGVKFSFKKINIDNPD 180
           IISQQSL LSSSERKETQESECRNEIQEAISWYKRVLDFHIEGGYGVKFSFKKINIDNPD
Sbjct: 121 IISQQSLVLSSSERKETQESECRNEIQEAISWYKRVLDFHIEGGYGVKFSFKKINIDNPD 180

Query: 181 EEYSFTIRHANDTYMLLDCNPSLPDIKELIHELNKTNGLFKLVRIMRQRFQEAAAEGAGA 240
           EEYSFTIRHANDTYMLLDCNPSLPDIKELIHELNKTNGLFKLVRIMR+RFQEAAAEG+GA
Sbjct: 181 EEYSFTIRHANDTYMLLDCNPSLPDIKELIHELNKTNGLFKLVRIMRRRFQEAAAEGSGA 240

Query: 241 PALSLHQGSTIISMSAPGLSSSSERSESSTEEINKDEVEETNKHSKNILPRKKPAIHSSG 300
           PALSLHQGS+IIS SAPGLSSS+ERS+SSTEEIN DEVEETNKHSKNILPRKKPAIHSSG
Sbjct: 241 PALSLHQGSSIISTSAPGLSSSTERSDSSTEEINMDEVEETNKHSKNILPRKKPAIHSSG 300

Query: 301 SAFSLRRSPRFKVRK 316
           SAFSLRRSPRFKVRK
Sbjct: 301 SAFSLRRSPRFKVRK 315

[Close]

BLAST of PI0021351.1 vs. NCBI nr
Match: XP_004138099.1 (kinetochore protein SPC25 homolog [Cucumis sativus] >KGN63556.1 hypothetical protein Csa_014306 [Cucumis sativus])

HSP 1 Score: 549.7 bits (1415), Expect = 1.7e-152
Identity = 297/315 (94.29%), Postives = 303/315 (96.19%), Query Frame = 0


Query: 1   MENKATDSVHARLEKLRIVRENEIPVQQQKMESFADSFCKSVESINVRSRANALSQGKLG 60
           MENKA DSV ARLEKLRI+RENEIPVQQQKMESFADSF KSVESI+VRSRANALSQGKLG
Sbjct: 1   MENKANDSVRARLEKLRILRENEIPVQQQKMESFADSFYKSVESISVRSRANALSQGKLG 60

Query: 61  ELKARLREAEDELVKALAVKTRKEAKRLTIIDSIATSKSRIEELRNTLQDCKARRDEYAT 120
           ELKARLRE EDELVKALAVKTRKEAKRLTIIDSIATSKSR EELRNTLQDCKARRDEYAT
Sbjct: 61  ELKARLRETEDELVKALAVKTRKEAKRLTIIDSIATSKSRTEELRNTLQDCKARRDEYAT 120

Query: 121 IISQQSLALSSSERKETQESECRNEIQEAISWYKRVLDFHIEGGYGVKFSFKKINIDNPD 180
           IISQQSL LSSSERKETQESECRNEIQEAISWYKRVLDFHIEGGYGVKFSFKKINIDNPD
Sbjct: 121 IISQQSLVLSSSERKETQESECRNEIQEAISWYKRVLDFHIEGGYGVKFSFKKINIDNPD 180

Query: 181 EEYSFTIRHANDTYMLLDCNPSLPDIKELIHELNKTNGLFKLVRIMRQRFQEAAAEGAGA 240
           EEYSFTIRHANDTYMLLDCNPSL DIKELIHELNKTNGLFKLVRIMR+RFQEAAAEGAGA
Sbjct: 181 EEYSFTIRHANDTYMLLDCNPSLSDIKELIHELNKTNGLFKLVRIMRRRFQEAAAEGAGA 240

Query: 241 PALSLHQGSTIISMSAPGLSSSSERSESSTEEINKDEVEETNKHSKNILPRKKPAIHSSG 300
           PALSLHQGS++IS SAP LSSS+E SESSTEEIN DEVEETNKHSKNILPRK PAIHSSG
Sbjct: 241 PALSLHQGSSVISTSAPVLSSSTEGSESSTEEINIDEVEETNKHSKNILPRKNPAIHSSG 300

Query: 301 SAFSLRRSPRFKVRK 316
           SAFSLRRSPRFKVRK
Sbjct: 301 SAFSLRRSPRFKVRK 315

[Close]

BLAST of PI0021351.1 vs. NCBI nr
Match: TYJ98520.1 (putative kinetochore protein SPC25 [Cucumis melo var. makuwa])

HSP 1 Score: 537.0 bits (1382), Expect = 1.1e-148
Identity = 301/364 (82.69%), Postives = 307/364 (84.34%), Query Frame = 0


Query: 1   MENKATDSVHARLEKLRIVRENEIPVQQQKMESFADSFCKSVESINVRSRANALSQG--- 60
           ME KATDSV ARLEKLRIVRENEIPVQQQKMESFADSFCKSVESI+VRSRANALSQG   
Sbjct: 1   MEIKATDSVRARLEKLRIVRENEIPVQQQKMESFADSFCKSVESISVRSRANALSQGELS 60

Query: 61  ------------------------------------------------KLGELKARLREA 120
                                                           KLGELKARLR A
Sbjct: 61  IFFILFGKEMGVKLVTVATYDTVIDIRMVCEVTIRVLKWVAIKTQNGWKLGELKARLRVA 120

Query: 121 EDELVKALAVKTRKEAKRLTIIDSIATSKSRIEELRNTLQDCKARRDEYATIISQQSLAL 180
           EDELVKALAVKTRKEAKRLTIIDSIATSKSRIEELRNTLQDCKARRDEYATIISQQSL L
Sbjct: 121 EDELVKALAVKTRKEAKRLTIIDSIATSKSRIEELRNTLQDCKARRDEYATIISQQSLVL 180

Query: 181 SSSERKETQESECRNEIQEAISWYKRVLDFHIEGGYGVKFSFKKINIDNPDEEYSFTIRH 240
           SSSERKETQESECRNEIQEAISWYKRVLDFHIEGGYGVKFSFKKINIDNPDEEYSFTIRH
Sbjct: 181 SSSERKETQESECRNEIQEAISWYKRVLDFHIEGGYGVKFSFKKINIDNPDEEYSFTIRH 240

Query: 241 ANDTYMLLDCNPSLPDIKELIHELNKTNGLFKLVRIMRQRFQEAAAEGAGAPALSLHQGS 300
           ANDTYMLLDCNPSLPDIKELIHELNKTNGLFKLVRIMR+RFQEAAAEG+GAPALSLHQGS
Sbjct: 241 ANDTYMLLDCNPSLPDIKELIHELNKTNGLFKLVRIMRRRFQEAAAEGSGAPALSLHQGS 300

Query: 301 TIISMSAPGLSSSSERSESSTEEINKDEVEETNKHSKNILPRKKPAIHSSGSAFSLRRSP 314
           +IIS SAPGLSSS+ERS+SSTEEIN DEVEETNKHSKNILPRKKPAIHSSGSAFSLRRSP
Sbjct: 301 SIISTSAPGLSSSTERSDSSTEEINMDEVEETNKHSKNILPRKKPAIHSSGSAFSLRRSP 360

[Close]

BLAST of PI0021351.1 vs. NCBI nr
Match: KAA0057836.1 (putative kinetochore protein SPC25 [Cucumis melo var. makuwa])

HSP 1 Score: 535.4 bits (1378), Expect = 3.3e-148
Identity = 300/364 (82.42%), Postives = 306/364 (84.07%), Query Frame = 0


Query: 1   MENKATDSVHARLEKLRIVRENEIPVQQQKMESFADSFCKSVESINVRSRANALSQG--- 60
           ME KATDSV ARLEKLRIVRENEIPVQQQKMESFADSFCKSVESI+VRSRANALSQG   
Sbjct: 1   MEIKATDSVRARLEKLRIVRENEIPVQQQKMESFADSFCKSVESISVRSRANALSQGELS 60

Query: 61  ------------------------------------------------KLGELKARLREA 120
                                                           KLGELKARLR A
Sbjct: 61  IFFILFGKEMGVKLVTVATYDTVIDIRMVCEVTIRVLKWVAIKTQNGWKLGELKARLRVA 120

Query: 121 EDELVKALAVKTRKEAKRLTIIDSIATSKSRIEELRNTLQDCKARRDEYATIISQQSLAL 180
           EDELVK LAVKTRKEAKRLTIIDSIATSKSRIEELRNTLQDCKARRDEYATIISQQSL L
Sbjct: 121 EDELVKTLAVKTRKEAKRLTIIDSIATSKSRIEELRNTLQDCKARRDEYATIISQQSLVL 180

Query: 181 SSSERKETQESECRNEIQEAISWYKRVLDFHIEGGYGVKFSFKKINIDNPDEEYSFTIRH 240
           SSSERKETQESECRNEIQEAISWYKRVLDFHIEGGYGVKFSFKKINIDNPDEEYSFTIRH
Sbjct: 181 SSSERKETQESECRNEIQEAISWYKRVLDFHIEGGYGVKFSFKKINIDNPDEEYSFTIRH 240

Query: 241 ANDTYMLLDCNPSLPDIKELIHELNKTNGLFKLVRIMRQRFQEAAAEGAGAPALSLHQGS 300
           ANDTYMLLDCNPSLPDIKELIHELNKTNGLFKLVRIMR+RFQEAAAEG+GAPALSLHQGS
Sbjct: 241 ANDTYMLLDCNPSLPDIKELIHELNKTNGLFKLVRIMRRRFQEAAAEGSGAPALSLHQGS 300

Query: 301 TIISMSAPGLSSSSERSESSTEEINKDEVEETNKHSKNILPRKKPAIHSSGSAFSLRRSP 314
           +IIS SAPGLSSS+ERS+SSTEEIN DEVEETNKHSKNILPRKKPAIHSSGSAFSLRRSP
Sbjct: 301 SIISTSAPGLSSSTERSDSSTEEINMDEVEETNKHSKNILPRKKPAIHSSGSAFSLRRSP 360

[Close]

BLAST of PI0021351.1 vs. NCBI nr
Match: XP_038880541.1 (kinetochore protein SPC25 homolog [Benincasa hispida])

HSP 1 Score: 520.0 bits (1338), Expect = 1.4e-143
Identity = 285/316 (90.19%), Postives = 297/316 (93.99%), Query Frame = 0


Query: 1   MENKATDSVHARLEKLRIVRENEIPVQQQKMESFADSFCKSVESINVRSRANALSQGKLG 60
           MENKA DSV ARLEKLRIVRE EIP QQQKMESF +SF KSVESINVRSRANALSQGKLG
Sbjct: 1   MENKAKDSVRARLEKLRIVREKEIPFQQQKMESFVNSFYKSVESINVRSRANALSQGKLG 60

Query: 61  ELKARLREAEDELVKALAVKTRKEAKRLTIIDSIATSKSRIEELRNTLQDCKARRDEYAT 120
           ELKARLREAEDELVKALAVKTRKEAKRLTIIDS+ATSKSRIEELRNTLQD KARRDEY+T
Sbjct: 61  ELKARLREAEDELVKALAVKTRKEAKRLTIIDSLATSKSRIEELRNTLQDSKARRDEYST 120

Query: 121 IISQQSLALSSSERKETQESECRNEIQEAISWYKRVLDFHIEGGYGVKFSFKKINIDNPD 180
           IIS+QSLALSSSERKE QESECR EIQEAISWYKRVLDFHIEGG+GVKFSFKKIN+ NPD
Sbjct: 121 IISRQSLALSSSERKEPQESECRKEIQEAISWYKRVLDFHIEGGHGVKFSFKKINVVNPD 180

Query: 181 EEYSFTIRHANDTYMLLDCNPSLPDIKELIHELNKTNGLFKLVRIMRQRFQEAAAEGAGA 240
           EEYSFTIRHANDTYMLLDCNPSLPDIKELIHELNKTNGLFKLVRIMR+RFQEAAA+G  A
Sbjct: 181 EEYSFTIRHANDTYMLLDCNPSLPDIKELIHELNKTNGLFKLVRIMRRRFQEAAAKGVEA 240

Query: 241 PALSLHQGSTIISMSAPGLSSSSERSESSTEEIN-KDEVEETNKHSKNILPRKKPAIHSS 300
            ALSLHQGS II MSAPGLSSS+ERSESS+EEIN KDE+EETNKH+K ILP KKPAI SS
Sbjct: 241 QALSLHQGSMIIPMSAPGLSSSTERSESSSEEINKKDELEETNKHTKKILPGKKPAIKSS 300

Query: 301 GSAFSLRRSPRFKVRK 316
           GSAFSLRRSPRFKVRK
Sbjct: 301 GSAFSLRRSPRFKVRK 316

[Close]

BLAST of PI0021351.1 vs. TAIR 10
Match: AT3G48210.1 (CONTAINS InterPro DOMAIN/s: Kinetochore-Ndc80 complex, subunit Spc25 (InterPro:IPR013255); Has 194 Blast hits to 194 proteins in 72 species: Archae - 0; Bacteria - 4; Metazoa - 72; Fungi - 39; Plants - 62; Viruses - 0; Other Eukaryotes - 17 (source: NCBI BLink). )

HSP 1 Score: 200.3 bits (508), Expect = 2.3e-51
Identity = 132/310 (42.58%), Postives = 192/310 (61.94%), Query Frame = 0


Query: 7   DSVHARLEKLRIVRENEIPVQQQKMESF-ADSFCKSVESINVRSRANALSQGKLGELKAR 66
           D+    +  L ++ E +I  Q+ K++SF A  F +S+ S+  R++A A SQ +L  LKA 
Sbjct: 11  DTTKETMASLGLICEKDIHEQRLKIDSFIASPFRRSMNSLVERAQATAQSQVELMNLKAD 70

Query: 67  LREAEDELVKALAVKTRKEAKRLTIIDSIATSKSRIEELRNTLQDCKARRDEYATIISQQ 126
           LREAEDELVK LAVKTRKEA+++ I DSI+ ++SRIE LR  LQ  K+++D+   IISQQ
Sbjct: 71  LREAEDELVKVLAVKTRKEARQMGIRDSISATQSRIEVLRRNLQLQKSKKDDSVRIISQQ 130

Query: 127 SLALSSSERKETQESECRNEIQEAISWYKRVLDFHIEGGYGVKFSFKKINIDNPDEEYSF 186
             ALS S+    + +E + +I EAISWY   L FH+E G+GVKF+F  I+   P  E+SF
Sbjct: 131 LQALSKSKDNAGKVTEDKADIHEAISWYNHALGFHVEAGHGVKFTFTNIDAKRPTREFSF 190

Query: 187 TIRHANDTYMLLDCNPSLPDIKELIHELNKTNGLFKLVRIMRQRFQEAAAEGAGAPALSL 246
           T+ + ND Y LLD +  L  I E++ ELNKTN LF+ VR+MR++F ++        +  L
Sbjct: 191 TVHYGNDIYTLLDSDLQLDYINEMVQELNKTNDLFRFVRLMREQFLKSTLSELPTHSGQL 250

Query: 247 HQGSTIISMSAPGLSSSSERSESSTEEINKDEVEETNKHSKNILPRKKPAIHSSGSAFSL 306
            Q ++ IS SAP +S S++ + S+ E  NK    + N+  K      +  + +  S  + 
Sbjct: 251 QQETSAISASAPAISFSTDTNMSTPE--NKRSKVQVNRRQKR---GSESPLLAPVSTSAT 310

Query: 307 RRSPRFKVRK 316
           RRS RFK +K
Sbjct: 311 RRSSRFKGKK 315

The following BLAST results are available for this feature:

BLAST of PI0021351.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q93VK9	3.3e-50	42.58	Kinetochore protein SPC25 homolog OS=Arabidopsis thaliana OX=3702 GN=SPC25 PE=1 ...	[more]

BLAST of PI0021351.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3CM71	3.2e-157	96.19	Kinetochore protein SPC25 OS=Cucumis melo OX=3656 GN=LOC103502389 PE=3 SV=1	[more]
A0A0A0LU84	8.1e-153	94.29	Kinetochore protein SPC25 OS=Cucumis sativus OX=3659 GN=Csa_1G004230 PE=3 SV=1	[more]
A0A5D3BFE9	5.4e-149	82.69	Kinetochore protein SPC25 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffo...	[more]
A0A5A7UUK0	1.6e-148	82.42	Kinetochore protein SPC25 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffo...	[more]
A0A6J1BYG5	1.6e-132	82.91	Kinetochore protein SPC25 OS=Momordica charantia OX=3673 GN=LOC111006883 PE=3 SV...	[more]

BLAST of PI0021351.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008464538.1	6.6e-157	96.19	PREDICTED: probable kinetochore protein SPC25 [Cucumis melo]	[more]
XP_004138099.1	1.7e-152	94.29	kinetochore protein SPC25 homolog [Cucumis sativus] >KGN63556.1 hypothetical pro...	[more]
TYJ98520.1	1.1e-148	82.69	putative kinetochore protein SPC25 [Cucumis melo var. makuwa]	[more]
KAA0057836.1	3.3e-148	82.42	putative kinetochore protein SPC25 [Cucumis melo var. makuwa]	[more]
XP_038880541.1	1.4e-143	90.19	kinetochore protein SPC25 homolog [Benincasa hispida]	[more]

BLAST of PI0021351.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G48210.1	2.3e-51	42.58	CONTAINS InterPro DOMAIN/s: Kinetochore-Ndc80 complex, subunit Spc25 (InterPro:I...	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 52..86
None	No IPR available	COILS	Coil	Coil	coord: 94..121
None	No IPR available	GENE3D	3.30.457.50	Chromosome segregation protein Spc25	coord: 138..237 e-value: 5.4E-25 score: 89.3
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 268..287
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 254..315
None	No IPR available	PANTHER	PTHR14281:SF3	SUBFAMILY NOT NAMED	coord: 1..313
IPR013255	Chromosome segregation protein Spc25, C-terminal	PFAM	PF08234	Spindle_Spc25	coord: 166..231 e-value: 1.4E-20 score: 73.3
IPR045143	Kinetochore protein Spc25	PANTHER	PTHR14281	KINETOCHORE PROTEIN SPC25-RELATED	coord: 1..313

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
PI0021351	PI0021351	gene

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
PI0021351.1-five_prime_utr	PI0021351.1-five_prime_utr-chr02:24489771..24489869	five_prime_UTR

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
PI0021351.1-exon	PI0021351.1-exon-chr02:24489771..24490038	exon
PI0021351.1-exon	PI0021351.1-exon-chr02:24490306..24490371	exon
PI0021351.1-exon	PI0021351.1-exon-chr02:24490642..24490788	exon
PI0021351.1-exon	PI0021351.1-exon-chr02:24491022..24491135	exon
PI0021351.1-exon	PI0021351.1-exon-chr02:24491232..24491321	exon
PI0021351.1-exon	PI0021351.1-exon-chr02:24491412..24491534	exon
PI0021351.1-exon	PI0021351.1-exon-chr02:24491613..24491839	exon
PI0021351.1-exon	PI0021351.1-exon-chr02:24492020..24492530	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
PI0021351.1-cds	PI0021351.1-cds-chr02:24489870..24490038	CDS
PI0021351.1-cds	PI0021351.1-cds-chr02:24490306..24490371	CDS
PI0021351.1-cds	PI0021351.1-cds-chr02:24490642..24490788	CDS
PI0021351.1-cds	PI0021351.1-cds-chr02:24491022..24491135	CDS
PI0021351.1-cds	PI0021351.1-cds-chr02:24491232..24491321	CDS
PI0021351.1-cds	PI0021351.1-cds-chr02:24491412..24491534	CDS
PI0021351.1-cds	PI0021351.1-cds-chr02:24491613..24491839	CDS
PI0021351.1-cds	PI0021351.1-cds-chr02:24492020..24492031	CDS

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
PI0021351.1-three_prime_utr	PI0021351.1-three_prime_utr-chr02:24492032..24492530	three_prime_UTR

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
PI0021351.1	PI0021351.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0007059	chromosome segregation
biological_process	GO:0007049	cell cycle
biological_process	GO:0051301	cell division
cellular_component	GO:0031262	Ndc80 complex
cellular_component	GO:0005634	nucleus