PI0021148.1 (mRNA) Melon (PI 482460) v1

Overview


Name	PI0021148.1
Type	mRNA
Organism	Cucumis metuliferus (Melon (PI 482460) v1)
Description	Reverse transcriptase domain-containing protein
Location	chr05: 6742048 .. 6742710 (-)
Sequence length	663
RNA-Seq Expression	PI0021148.1
Synteny	PI0021148.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTTCTGTATCGGTTTTATTAGGTCCTGGAGTCTTCGTGCTATTCTGAGGCATCGTGATATCTTTAGAGAGCATGTCCGTATGGAGGTTGGTGATGGTAGGTGTTGTCGTGTGTGGCTTGACCCTTGGCTGCACGGAGGCGCGATCATTTGGCAGATGGGCGAGCGGGTGGTGTATGATGCTGCGAGCAGTAGGGAGGCTAGGCTTTCTGAGTTCATTGGCTTGGATGGCGAGTGGAGGTGGCCGAGGGTTTCTTGGGAGTTACTTGAGTTGTGGGAGAGGGTTCAGGGCGTTCGTCCTTGTTTGAGTATTGGGGATAGCTGGGTGTGCGTTCCGGGTCGTCAGGGTGAGTTCTCAATTTCGAGTGCGTGGGAGGCTATTCGTCCTAGGAGTGATAAGGTTTGTTGGGTTGGTTTGCTGTGGGGTGGGGGGAATATTCCTAGACATTCTTTCTGTGCTTGGTTGGTTATTAGGGATAGGTTGGGCACTCGGGATAGGTTGAGTAGGTGGGATAGTTTGATTCCTCGATCGTTTCTTCTTTGCCAAGGGGGTGTTGAGTCTCGGGATCATCTATTTTTTTCTTGTCCCTTTGGGTATGATATCTGGACTCGTATTATTCGGGATATGGCGTCCTCTCATAGGGTTGGGGGGTGGGAGGTTTAG

mRNA sequence

ATGTTCTGTATCGGTTTTATTAGGTCCTGGAGTCTTCGTGCTATTCTGAGGCATCGTGATATCTTTAGAGAGCATGTCCGTATGGAGGTTGGTGATGGTAGGTGTTGTCGTGTGTGGCTTGACCCTTGGCTGCACGGAGGCGCGATCATTTGGCAGATGGGCGAGCGGGTGGTGTATGATGCTGCGAGCAGTAGGGAGGCTAGGCTTTCTGAGTTCATTGGCTTGGATGGCGAGTGGAGGTGGCCGAGGGTTTCTTGGGAGTTACTTGAGTTGTGGGAGAGGGTTCAGGGCGTTCGTCCTTGTTTGAGTATTGGGGATAGCTGGGTGTGCGTTCCGGGTCGTCAGGGTGAGTTCTCAATTTCGAGTGCGTGGGAGGCTATTCGTCCTAGGAGTGATAAGGTTTGTTGGGTTGGTTTGCTGTGGGGTGGGGGGAATATTCCTAGACATTCTTTCTGTGCTTGGTTGGTTATTAGGGATAGGTTGGGCACTCGGGATAGGTTGAGTAGGTGGGATAGTTTGATTCCTCGATCGTTTCTTCTTTGCCAAGGGGGTGTTGAGTCTCGGGATCATCTATTTTTTTCTTGTCCCTTTGGGTATGATATCTGGACTCGTATTATTCGGGATATGGCGTCCTCTCATAGGGTTGGGGGGTGGGAGGTTTAG

Coding sequence (CDS)

ATGTTCTGTATCGGTTTTATTAGGTCCTGGAGTCTTCGTGCTATTCTGAGGCATCGTGATATCTTTAGAGAGCATGTCCGTATGGAGGTTGGTGATGGTAGGTGTTGTCGTGTGTGGCTTGACCCTTGGCTGCACGGAGGCGCGATCATTTGGCAGATGGGCGAGCGGGTGGTGTATGATGCTGCGAGCAGTAGGGAGGCTAGGCTTTCTGAGTTCATTGGCTTGGATGGCGAGTGGAGGTGGCCGAGGGTTTCTTGGGAGTTACTTGAGTTGTGGGAGAGGGTTCAGGGCGTTCGTCCTTGTTTGAGTATTGGGGATAGCTGGGTGTGCGTTCCGGGTCGTCAGGGTGAGTTCTCAATTTCGAGTGCGTGGGAGGCTATTCGTCCTAGGAGTGATAAGGTTTGTTGGGTTGGTTTGCTGTGGGGTGGGGGGAATATTCCTAGACATTCTTTCTGTGCTTGGTTGGTTATTAGGGATAGGTTGGGCACTCGGGATAGGTTGAGTAGGTGGGATAGTTTGATTCCTCGATCGTTTCTTCTTTGCCAAGGGGGTGTTGAGTCTCGGGATCATCTATTTTTTTCTTGTCCCTTTGGGTATGATATCTGGACTCGTATTATTCGGGATATGGCGTCCTCTCATAGGGTTGGGGGGTGGGAGGTTTAG

Protein sequence

MFCIGFIRSWSLRAILRHRDIFREHVRMEVGDGRCCRVWLDPWLHGGAIIWQMGERVVYDAASSREARLSEFIGLDGEWRWPRVSWELLELWERVQGVRPCLSIGDSWVCVPGRQGEFSISSAWEAIRPRSDKVCWVGLLWGGGNIPRHSFCAWLVIRDRLGTRDRLSRWDSLIPRSFLLCQGGVESRDHLFFSCPFGYDIWTRIIRDMASSHRVGGWEV

Homology

[Close]

BLAST of PI0021148.1 vs. ExPASy TrEMBL
Match: A0A5A7TKU4 (Non-LTR retroelement reverse transcriptase-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold477G00080 PE=4 SV=1)

HSP 1 Score: 351.3 bits (900), Expect = 3.0e-93
Identity = 153/216 (70.83%), Postives = 179/216 (82.87%), Query Frame = 0


Query: 5    GFIRSWSLRAILRHRDIFREHVRMEVGDGRCCRVWLDPWLHGGAIIWQMGERVVYDAASS 64
            G  RSW LRAILR RD  + HV +EVGDG  CRVWLDPWL G  I+ Q+GERV+YDAAS 
Sbjct: 891  GVCRSWCLRAILRKRDSLKYHVWIEVGDGSSCRVWLDPWLQGVPILEQVGERVLYDAASR 950

Query: 65   REARLSEFIGLDGEWRWPRVSWELLELWERVQGVRPCLSIGDSWVCVPGRQGEFSISSAW 124
            REARLSEFIG DGEW+WPRVS EL++LW+RVQ VRPCLS+ D WV VPG QG FSI+SA 
Sbjct: 951  REARLSEFIGPDGEWQWPRVSIELIDLWDRVQAVRPCLSVRDRWVWVPGHQGGFSIASAL 1010

Query: 125  EAIRPRSDKVCWVGLLWGGGNIPRHSFCAWLVIRDRLGTRDRLSRWDSLIPRSFLLCQGG 184
            + IRPR  +V WVGLLWGGGN+P+HSFCAWL I+++LGTRDRL RWDS +P SF+LCQGG
Sbjct: 1011 DTIRPRGGRVRWVGLLWGGGNVPKHSFCAWLTIKNKLGTRDRLHRWDSSVPMSFILCQGG 1070

Query: 185  VESRDHLFFSCPFGYDIWTRIIRDMASSHRVGGWEV 221
            VESRDHLFFSCPFG D+W+R+++ MASSHR+  W V
Sbjct: 1071 VESRDHLFFSCPFGRDVWSRVLQVMASSHRIRYWGV 1106

[Close]

BLAST of PI0021148.1 vs. ExPASy TrEMBL
Match: A0A5A7TZS0 (Reverse transcriptase domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold19358G00020 PE=4 SV=1)

HSP 1 Score: 291.6 bits (745), Expect = 2.8e-75
Identity = 135/213 (63.38%), Postives = 154/213 (72.30%), Query Frame = 0


Query: 8    RSWSLRAILRHRDIFREHVRMEVGDGRCCRVWLDPWLHGGAIIWQMGERVVYDAASSREA 67
            RSW LRAILR R+  + HV                           GERV+YDAAS REA
Sbjct: 870  RSWCLRAILRKREKMKHHV---------------------------GERVLYDAASRREA 929

Query: 68   RLSEFIGLDGEWRWPRVSWELLELWERVQGVRPCLSIGDSWVCVPGRQGEFSISSAWEAI 127
            +LS+FI  +GEW WPRVS EL++LWERVQ V PCLS+ DSWV VPGRQG FSI+SAWEAI
Sbjct: 930  KLSDFIDPNGEWLWPRVSLELIDLWERVQEVSPCLSVSDSWVWVPGRQGGFSIASAWEAI 989

Query: 128  RPRSDKVCWVGLLWGGGNIPRHSFCAWLVIRDRLGTRDRLSRWDSLIPRSFLLCQGGVES 187
             PR  +V W GLLWGGGNIP+HSFCAWL I+DRL TRDRL RWDS IP S +LCQGGVES
Sbjct: 990  CPRGGRVLWDGLLWGGGNIPKHSFCAWLAIKDRLDTRDRLHRWDSSIPLSCILCQGGVES 1049

Query: 188  RDHLFFSCPFGYDIWTRIIRDMASSHRVGGWEV 221
            RDHLFFSCPFG D+W+R+ + M SSHR+G W V
Sbjct: 1050 RDHLFFSCPFGGDVWSRVFQIMESSHRIGHWGV 1055

[Close]

BLAST of PI0021148.1 vs. ExPASy TrEMBL
Match: A0A5A7UP65 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold43054G00070 PE=4 SV=1)

HSP 1 Score: 286.6 bits (732), Expect = 8.9e-74
Identity = 130/213 (61.03%), Postives = 152/213 (71.36%), Query Frame = 0


Query: 8   RSWSLRAILRHRDIFREHVRMEVGDGRCCRVWLDPWLHGGAIIWQMGERVVYDAASSREA 67
           RSW LRAILR ++  ++HVRM+VG+G  CRVWLDPWL  GAI+ Q+GERV+YDAAS REA
Sbjct: 770 RSWCLRAILRKQEKLKQHVRMKVGNGNRCRVWLDPWLQRGAILEQVGERVLYDAASRREA 829

Query: 68  RLSEFIGLDGEWRWPRVSWELLELWERVQGVRPCLSIGDSWVCVPGRQGEFSISSAWEAI 127
            LS FIG DGEW WPR                                G FSI+SAWEAI
Sbjct: 830 SLSNFIGPDGEWLWPR--------------------------------GGFSIASAWEAI 889

Query: 128 RPRSDKVCWVGLLWGGGNIPRHSFCAWLVIRDRLGTRDRLSRWDSLIPRSFLLCQGGVES 187
           RPR  +V W GLLWGGGNIP+HSFCAWL I+DRLGTRDR  RWDS +P S +LC+GG+ES
Sbjct: 890 RPRGGRVLWDGLLWGGGNIPKHSFCAWLAIKDRLGTRDRFHRWDSSVPLSCILCEGGMES 949

Query: 188 RDHLFFSCPFGYDIWTRIIRDMASSHRVGGWEV 221
           RDHLFFSCPFG D+W+R++R MASSHR+G W V
Sbjct: 950 RDHLFFSCPFGGDVWSRVLRIMASSHRIGHWGV 950

[Close]

BLAST of PI0021148.1 vs. ExPASy TrEMBL
Match: A0A5D3D7P6 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold416G00080 PE=4 SV=1)

HSP 1 Score: 285.0 bits (728), Expect = 2.6e-73
Identity = 129/213 (60.56%), Postives = 152/213 (71.36%), Query Frame = 0


Query: 8   RSWSLRAILRHRDIFREHVRMEVGDGRCCRVWLDPWLHGGAIIWQMGERVVYDAASSREA 67
           RSW LRAILR ++  ++HVRM+VG+G  CRVWLDPWL  GAI+ ++GERV+YDAAS REA
Sbjct: 751 RSWCLRAILRKQEKLKQHVRMKVGNGNRCRVWLDPWLQRGAILERVGERVLYDAASRREA 810

Query: 68  RLSEFIGLDGEWRWPRVSWELLELWERVQGVRPCLSIGDSWVCVPGRQGEFSISSAWEAI 127
            LS FIG DGEW WPR                                G FSI+SAWEAI
Sbjct: 811 SLSNFIGPDGEWLWPR--------------------------------GGFSIASAWEAI 870

Query: 128 RPRSDKVCWVGLLWGGGNIPRHSFCAWLVIRDRLGTRDRLSRWDSLIPRSFLLCQGGVES 187
           RPR  +V W GLLWGGGNIP+HSFCAWL I+DRLGTRDR  RWDS +P S +LC+GG+ES
Sbjct: 871 RPRGGRVLWDGLLWGGGNIPKHSFCAWLAIKDRLGTRDRFHRWDSSVPLSCILCEGGMES 930

Query: 188 RDHLFFSCPFGYDIWTRIIRDMASSHRVGGWEV 221
           RDHLFFSCPFG D+W+R++R MASSHR+G W V
Sbjct: 931 RDHLFFSCPFGGDVWSRVLRIMASSHRIGHWGV 931

[Close]

BLAST of PI0021148.1 vs. ExPASy TrEMBL
Match: A0A1S3BSI8 (uncharacterized protein LOC103493225 OS=Cucumis melo OX=3656 GN=LOC103493225 PE=4 SV=1)

HSP 1 Score: 285.0 bits (728), Expect = 2.6e-73
Identity = 129/213 (60.56%), Postives = 152/213 (71.36%), Query Frame = 0


Query: 8   RSWSLRAILRHRDIFREHVRMEVGDGRCCRVWLDPWLHGGAIIWQMGERVVYDAASSREA 67
           RSW LRAILR ++  ++HVRM+VG+G  CRVWLDPWL  GAI+ ++GERV+YDAAS REA
Sbjct: 703 RSWCLRAILRKQEKLKQHVRMKVGNGNRCRVWLDPWLQRGAILERVGERVLYDAASRREA 762

Query: 68  RLSEFIGLDGEWRWPRVSWELLELWERVQGVRPCLSIGDSWVCVPGRQGEFSISSAWEAI 127
            LS FIG DGEW WPR                                G FSI+SAWEAI
Sbjct: 763 SLSNFIGPDGEWLWPR--------------------------------GGFSIASAWEAI 822

Query: 128 RPRSDKVCWVGLLWGGGNIPRHSFCAWLVIRDRLGTRDRLSRWDSLIPRSFLLCQGGVES 187
           RPR  +V W GLLWGGGNIP+HSFCAWL I+DRLGTRDR  RWDS +P S +LC+GG+ES
Sbjct: 823 RPRGGRVLWDGLLWGGGNIPKHSFCAWLAIKDRLGTRDRFHRWDSSVPLSCILCEGGMES 882

Query: 188 RDHLFFSCPFGYDIWTRIIRDMASSHRVGGWEV 221
           RDHLFFSCPFG D+W+R++R MASSHR+G W V
Sbjct: 883 RDHLFFSCPFGGDVWSRVLRIMASSHRIGHWGV 883

[Close]

BLAST of PI0021148.1 vs. NCBI nr
Match: KAA0042317.1 (non-LTR retroelement reverse transcriptase-like protein [Cucumis melo var. makuwa] >TYK15441.1 non-LTR retroelement reverse transcriptase-like protein [Cucumis melo var. makuwa])

HSP 1 Score: 351.3 bits (900), Expect = 6.1e-93
Identity = 153/216 (70.83%), Postives = 179/216 (82.87%), Query Frame = 0


Query: 5    GFIRSWSLRAILRHRDIFREHVRMEVGDGRCCRVWLDPWLHGGAIIWQMGERVVYDAASS 64
            G  RSW LRAILR RD  + HV +EVGDG  CRVWLDPWL G  I+ Q+GERV+YDAAS 
Sbjct: 891  GVCRSWCLRAILRKRDSLKYHVWIEVGDGSSCRVWLDPWLQGVPILEQVGERVLYDAASR 950

Query: 65   REARLSEFIGLDGEWRWPRVSWELLELWERVQGVRPCLSIGDSWVCVPGRQGEFSISSAW 124
            REARLSEFIG DGEW+WPRVS EL++LW+RVQ VRPCLS+ D WV VPG QG FSI+SA 
Sbjct: 951  REARLSEFIGPDGEWQWPRVSIELIDLWDRVQAVRPCLSVRDRWVWVPGHQGGFSIASAL 1010

Query: 125  EAIRPRSDKVCWVGLLWGGGNIPRHSFCAWLVIRDRLGTRDRLSRWDSLIPRSFLLCQGG 184
            + IRPR  +V WVGLLWGGGN+P+HSFCAWL I+++LGTRDRL RWDS +P SF+LCQGG
Sbjct: 1011 DTIRPRGGRVRWVGLLWGGGNVPKHSFCAWLTIKNKLGTRDRLHRWDSSVPMSFILCQGG 1070

Query: 185  VESRDHLFFSCPFGYDIWTRIIRDMASSHRVGGWEV 221
            VESRDHLFFSCPFG D+W+R+++ MASSHR+  W V
Sbjct: 1071 VESRDHLFFSCPFGRDVWSRVLQVMASSHRIRYWGV 1106

[Close]

BLAST of PI0021148.1 vs. NCBI nr
Match: XP_031737556.1 (uncharacterized protein LOC116402448 [Cucumis sativus])

HSP 1 Score: 311.2 bits (796), Expect = 7.0e-81
Identity = 138/217 (63.59%), Postives = 166/217 (76.50%), Query Frame = 0


Query: 4   IGFIRSWSLRAILRHRDIFREHVRMEVGDGRCCRVWLDPWLHGGAIIWQMGERVVYDAAS 63
           +G  RSW  RAILR RDI + HV+MEVG+G+ CRVWLDP + GG II Q GERV+YDA S
Sbjct: 29  VGVGRSWCFRAILRKRDILKAHVKMEVGNGKKCRVWLDPRIQGGPIIQQFGERVIYDADS 88

Query: 64  SREARLSEFIGLDGEWRWPRVSWELLELWERVQGVRPCLSIGDSWVCVPGRQGEFSISSA 123
            R+ARL +F+G DG+WRW  VS +L+++W+R+QGVRP  S+ D WV VPG    FSI SA
Sbjct: 89  RRDARLVDFMGRDGDWRWSLVSLDLMDIWDRIQGVRPSPSVEDMWVRVPGSHESFSIVSA 148

Query: 124 WEAIRPRSDKVCWVGLLWGGGNIPRHSFCAWLVIRDRLGTRDRLSRWDSLIPRSFLLCQG 183
            EAIRP S +V W GLLWGGGNIP+HSF  WL I+DRLGTRDRLSRWDS IP S +LC  
Sbjct: 149 CEAIRPHSSRVGWSGLLWGGGNIPKHSFYTWLAIKDRLGTRDRLSRWDSSIPLSCILCGR 208

Query: 184 GVESRDHLFFSCPFGYDIWTRIIRDMASSHRVGGWEV 221
             ESRDHLFF CPFG++IW+RI+  M+SSHR+  W V
Sbjct: 209 NYESRDHLFFPCPFGWEIWSRILLFMSSSHRIRYWGV 245

[Close]

BLAST of PI0021148.1 vs. NCBI nr
Match: KAA0046851.1 (uncharacterized protein E6C27_scaffold19358G00020 [Cucumis melo var. makuwa])

HSP 1 Score: 291.6 bits (745), Expect = 5.7e-75
Identity = 135/213 (63.38%), Postives = 154/213 (72.30%), Query Frame = 0


Query: 8    RSWSLRAILRHRDIFREHVRMEVGDGRCCRVWLDPWLHGGAIIWQMGERVVYDAASSREA 67
            RSW LRAILR R+  + HV                           GERV+YDAAS REA
Sbjct: 870  RSWCLRAILRKREKMKHHV---------------------------GERVLYDAASRREA 929

Query: 68   RLSEFIGLDGEWRWPRVSWELLELWERVQGVRPCLSIGDSWVCVPGRQGEFSISSAWEAI 127
            +LS+FI  +GEW WPRVS EL++LWERVQ V PCLS+ DSWV VPGRQG FSI+SAWEAI
Sbjct: 930  KLSDFIDPNGEWLWPRVSLELIDLWERVQEVSPCLSVSDSWVWVPGRQGGFSIASAWEAI 989

Query: 128  RPRSDKVCWVGLLWGGGNIPRHSFCAWLVIRDRLGTRDRLSRWDSLIPRSFLLCQGGVES 187
             PR  +V W GLLWGGGNIP+HSFCAWL I+DRL TRDRL RWDS IP S +LCQGGVES
Sbjct: 990  CPRGGRVLWDGLLWGGGNIPKHSFCAWLAIKDRLDTRDRLHRWDSSIPLSCILCQGGVES 1049

Query: 188  RDHLFFSCPFGYDIWTRIIRDMASSHRVGGWEV 221
            RDHLFFSCPFG D+W+R+ + M SSHR+G W V
Sbjct: 1050 RDHLFFSCPFGGDVWSRVFQIMESSHRIGHWGV 1055

[Close]

BLAST of PI0021148.1 vs. NCBI nr
Match: KAA0057642.1 (reverse transcriptase [Cucumis melo var. makuwa])

HSP 1 Score: 286.6 bits (732), Expect = 1.8e-73
Identity = 130/213 (61.03%), Postives = 152/213 (71.36%), Query Frame = 0


Query: 8   RSWSLRAILRHRDIFREHVRMEVGDGRCCRVWLDPWLHGGAIIWQMGERVVYDAASSREA 67
           RSW LRAILR ++  ++HVRM+VG+G  CRVWLDPWL  GAI+ Q+GERV+YDAAS REA
Sbjct: 770 RSWCLRAILRKQEKLKQHVRMKVGNGNRCRVWLDPWLQRGAILEQVGERVLYDAASRREA 829

Query: 68  RLSEFIGLDGEWRWPRVSWELLELWERVQGVRPCLSIGDSWVCVPGRQGEFSISSAWEAI 127
            LS FIG DGEW WPR                                G FSI+SAWEAI
Sbjct: 830 SLSNFIGPDGEWLWPR--------------------------------GGFSIASAWEAI 889

Query: 128 RPRSDKVCWVGLLWGGGNIPRHSFCAWLVIRDRLGTRDRLSRWDSLIPRSFLLCQGGVES 187
           RPR  +V W GLLWGGGNIP+HSFCAWL I+DRLGTRDR  RWDS +P S +LC+GG+ES
Sbjct: 890 RPRGGRVLWDGLLWGGGNIPKHSFCAWLAIKDRLGTRDRFHRWDSSVPLSCILCEGGMES 949

Query: 188 RDHLFFSCPFGYDIWTRIIRDMASSHRVGGWEV 221
           RDHLFFSCPFG D+W+R++R MASSHR+G W V
Sbjct: 950 RDHLFFSCPFGGDVWSRVLRIMASSHRIGHWGV 950

[Close]

BLAST of PI0021148.1 vs. NCBI nr
Match: XP_008452126.1 (PREDICTED: uncharacterized protein LOC103493225 [Cucumis melo])

HSP 1 Score: 285.0 bits (728), Expect = 5.4e-73
Identity = 129/213 (60.56%), Postives = 152/213 (71.36%), Query Frame = 0


Query: 8   RSWSLRAILRHRDIFREHVRMEVGDGRCCRVWLDPWLHGGAIIWQMGERVVYDAASSREA 67
           RSW LRAILR ++  ++HVRM+VG+G  CRVWLDPWL  GAI+ ++GERV+YDAAS REA
Sbjct: 703 RSWCLRAILRKQEKLKQHVRMKVGNGNRCRVWLDPWLQRGAILERVGERVLYDAASRREA 762

Query: 68  RLSEFIGLDGEWRWPRVSWELLELWERVQGVRPCLSIGDSWVCVPGRQGEFSISSAWEAI 127
            LS FIG DGEW WPR                                G FSI+SAWEAI
Sbjct: 763 SLSNFIGPDGEWLWPR--------------------------------GGFSIASAWEAI 822

Query: 128 RPRSDKVCWVGLLWGGGNIPRHSFCAWLVIRDRLGTRDRLSRWDSLIPRSFLLCQGGVES 187
           RPR  +V W GLLWGGGNIP+HSFCAWL I+DRLGTRDR  RWDS +P S +LC+GG+ES
Sbjct: 823 RPRGGRVLWDGLLWGGGNIPKHSFCAWLAIKDRLGTRDRFHRWDSSVPLSCILCEGGMES 882

Query: 188 RDHLFFSCPFGYDIWTRIIRDMASSHRVGGWEV 221
           RDHLFFSCPFG D+W+R++R MASSHR+G W V
Sbjct: 883 RDHLFFSCPFGGDVWSRVLRIMASSHRIGHWGV 883

[Close]

BLAST of PI0021148.1 vs. TAIR 10
Match: AT1G60720.1 (RNA-directed DNA polymerase (reverse transcriptase)-related family protein )

HSP 1 Score: 110.5 bits (275), Expect = 1.7e-24
Identity = 68/199 (34.17%), Postives = 97/199 (48.74%), Query Frame = 0


Query: 19  RDIFREHVRMEVGDGRCCRVWLDPWLHGGAIIWQMGERVVYDAASSR---EARLSEFIGL 78
           R +  + V+  +G+GR    W D W   G +I  MG+   Y + S R    AR+ E +G+
Sbjct: 6   RPLAEQFVKCNLGNGRIAHFWHDSWTSLGPLIKVMGD---YGSRSLRIPLNARVVEALGV 65

Query: 79  DGEWRWPRVSWELLELWERVQGVRPCLS---------IGDSWVCVPGR---QGEFSISSA 138
           +G W+ P      L      Q +   +S         I DS+  V G    QG FS +  
Sbjct: 66  NG-WKLP------LSRSAPAQAIHDHISTITTPSPATIEDSFDWVVGGVVCQG-FSSART 125

Query: 139 WEAIRPRSDKVCWVGLLWGGGNIPRHSFCAWLVIRDRLGTRDRLSRWDSLIPRSFLLCQG 198
           W+AIRPR+ ++ W   +W  G +P+H+F  W+   DRL TR RL+ W  +      LC  
Sbjct: 126 WDAIRPRAPELDWAKAVWFKGAVPKHAFNMWISQLDRLPTRQRLASWGHIQSFDCCLCTI 185

Query: 199 GVESRDHLFFSCPFGYDIW 203
             ESRDHL FSC F   +W
Sbjct: 186 ETESRDHLLFSCEFAAQVW 193

[Close]

BLAST of PI0021148.1 vs. TAIR 10
Match: AT5G16486.1 (RNA-directed DNA polymerase (reverse transcriptase)-related family protein )

HSP 1 Score: 110.2 bits (274), Expect = 2.2e-24
Identity = 65/204 (31.86%), Postives = 97/204 (47.55%), Query Frame = 0


Query: 9   SWSLRAILRHRDIFREHVRMEVGDGRCCRVWLDPWLHGGAIIWQMGERVVYDAASSREAR 68
           SW  ++I + R + RE V  +VG G  C  W + W + G +I   G+     +   R A 
Sbjct: 8   SWIWKSICKLRPMAREFVVCKVGSGITCNFWSENWTNLGPLIHLTGDLGPRVSGLPRNAS 67

Query: 69  LSEFIGLDGEWRWPRVSWELLELWERVQGVRPCLSIGDSWV---------CVPGRQGEFS 128
           +++ +  DG W W   S     + + ++   P  S+ +  V          V G +    
Sbjct: 68  VADAL-RDGVW-WINGSRSRNPIIQLLKNCLPLSSVVNLQVDAEDDLFMWKVGGSEASVG 127

Query: 129 ISSA--WEAIRPRSDKVCWVGLLWGGGNIPRHSFCAWLVIRDRLGTRDRLSRWDSLIPRS 188
            SSA  W  + P  +KV W   +W  G IP+H+F +W+ IR RL TRD+L  W   +P  
Sbjct: 128 FSSAATWIHLNPVGEKVDWHKAIWFKGRIPKHAFISWVNIRHRLPTRDKLLSWGLHVPSL 187

Query: 189 FLLCQGGVESRDHLFFSCPFGYDI 202
            LLC    E+R HLFF C F  +I
Sbjct: 188 CLLCNAFDETRQHLFFDCVFAGEI 209

[Close]

BLAST of PI0021148.1 vs. TAIR 10
Match: AT4G04650.1 (RNA-directed DNA polymerase (reverse transcriptase)-related family protein )

HSP 1 Score: 102.4 bits (254), Expect = 4.6e-22
Identity = 62/193 (32.12%), Postives = 87/193 (45.08%), Query Frame = 0


Query: 19  RDIFREHVRMEVGDGRCCRVWLDPWLHGG---AIIWQMGERVV---YDAASSREARLSEF 78
           R + R  +  EVG G   + W D W+  G    +I  +G R V    DA      R + +
Sbjct: 5   RVVARPFIVCEVGSGVTAKFWHDNWIGLGPLIEVIGPLGPRTVGLPIDAVVRDALRGTSW 64

Query: 79  IGLDGEWRWPRVSWELLELWERVQGVRPCLSIGDSWVC---VPGRQGEFSISSAWEAIRP 138
                  R P +  +L  L    QG+  C    DS++    +      FS    W A+ P
Sbjct: 65  WIASSRSRNP-IIVQLKNLLPEAQGLLDC-QHDDSFLWKTDLHAPSNRFSAPRTWSALHP 124

Query: 139 RSDKVCWVGLLWGGGNIPRHSFCAWLVIRDRLGTRDRLSRWDSLIPRSFLLCQGGVESRD 198
           +S  V W   +W   ++P+H+F  W+V  +RL TRDRL  W   IP   LLC    +SR 
Sbjct: 125 QSHTVPWHKAVWFKNHVPKHAFICWVVAWNRLHTRDRLQNWGLSIPAECLLCNAHDDSRA 184

Query: 199 HLFFSCPFGYDIW 203
           HLFF C F   +W
Sbjct: 185 HLFFECQFSGVVW 195

[Close]

BLAST of PI0021148.1 vs. TAIR 10
Match: AT5G18880.1 (RNA-directed DNA polymerase (reverse transcriptase)-related family protein )

HSP 1 Score: 102.4 bits (254), Expect = 4.6e-22
Identity = 59/185 (31.89%), Postives = 82/185 (44.32%), Query Frame = 0


Query: 24  EHVRMEVGDGRCCRVWLDPWLHGGAIIWQMGERVVYDAASSREARLSEFIGLDGEWRWPR 83
           E +R ++G+G     W D W   G ++  +G          ++AR+ E    +G+W  P 
Sbjct: 10  EFMRCDMGNGESASFWYDAWTDFGQLLTFLGAAGPRQLRIRQDARVVE-ASRNGDWFLPA 69

Query: 84  VSWELLELWERVQGVRPC--LSIGDS---WVCVPGRQ-GEFSISSAWEAIRPRSDKVCWV 143
              +  +L+     + P    S G     W    G     FS    WE IR  S  V W 
Sbjct: 70  ARSDNSQLFLAALTMAPVPHESRGQDSFLWRNAAGSYLPSFSSRDTWEQIRVHSPTVPWA 129

Query: 144 GLLWGGGNIPRHSFCAWLVIRDRLGTRDRLSRWDSLIPRSFLLCQGGVESRDHLFFSCPF 203
            ++W    IPR S   W+   +RL TRDRL  W   IP S++LC  G E+  HLFF C F
Sbjct: 130 KVVWFKEYIPRFSLITWMSFLERLPTRDRLRGWGMNIPSSWVLCSNGDETHAHLFFECSF 189

[Close]

BLAST of PI0021148.1 vs. TAIR 10
Match: AT3G24255.1 (RNA-directed DNA polymerase (reverse transcriptase)-related family protein )

HSP 1 Score: 98.6 bits (244), Expect = 6.6e-21
Identity = 60/198 (30.30%), Postives = 96/198 (48.48%), Query Frame = 0


Query: 9   SWSLRAILRHRDIFREHVRMEVGDGRCCRVWLDPWLHGGAIIWQMGERVVYDAASSREAR 68
           SW  + IL+HR +    V+ ++ +G     W D W   G +I   G R   D   +  A 
Sbjct: 154 SWMWKKILKHRALASGFVKHDIHNGSNTSFWFDNWSKIGRLIDVTGHRGCIDMGITLHAS 213

Query: 69  LSEFIGLDGEWRWPRVSWELLELWERVQGVR-PCLSIGDSWVCVPGR----QGEFSISSA 128
           ++E + ++   R  R    LL + + +  VR   L+ G+  V   G     +  F+    
Sbjct: 214 VAEAV-VNHRPRRHRHD-TLLRIEDVIAEVRHQGLTSGEDTVRWKGNGDIFKPCFNTKET 273

Query: 129 WEAIRPRSDKVCWVGLLWGGGNIPRHSFCAWLVIRDRLGTRDRLSRWDSLIPRSFLLCQG 188
           W A R    KV W   +W     P++S  AW+ I++RL T DR+  W++    S +LC  
Sbjct: 274 WAATREPKLKVNWYKGVWFSHATPKYSVLAWIAIKNRLTTGDRMLSWNAGADSSCVLCHH 333

Query: 189 GVESRDHLFFSCPFGYDI 202
            VE+RDHLFF+CP+  ++
Sbjct: 334 LVETRDHLFFTCPYSAEV 349

The following BLAST results are available for this feature:

BLAST of PI0021148.1 vs.


Match Name	E-value	Identity	Description

BLAST of PI0021148.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7TKU4	3.0e-93	70.83	Non-LTR retroelement reverse transcriptase-like protein OS=Cucumis melo var. mak...	[more]
A0A5A7TZS0	2.8e-75	63.38	Reverse transcriptase domain-containing protein OS=Cucumis melo var. makuwa OX=1...	[more]
A0A5A7UP65	8.9e-74	61.03	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold43...	[more]
A0A5D3D7P6	2.6e-73	60.56	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold41...	[more]
A0A1S3BSI8	2.6e-73	60.56	uncharacterized protein LOC103493225 OS=Cucumis melo OX=3656 GN=LOC103493225 PE=...	[more]

BLAST of PI0021148.1 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0042317.1	6.1e-93	70.83	non-LTR retroelement reverse transcriptase-like protein [Cucumis melo var. makuw...	[more]
XP_031737556.1	7.0e-81	63.59	uncharacterized protein LOC116402448 [Cucumis sativus]	[more]
KAA0046851.1	5.7e-75	63.38	uncharacterized protein E6C27_scaffold19358G00020 [Cucumis melo var. makuwa]	[more]
KAA0057642.1	1.8e-73	61.03	reverse transcriptase [Cucumis melo var. makuwa]	[more]
XP_008452126.1	5.4e-73	60.56	PREDICTED: uncharacterized protein LOC103493225 [Cucumis melo]	[more]

BLAST of PI0021148.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G60720.1	1.7e-24	34.17	RNA-directed DNA polymerase (reverse transcriptase)-related family protein	[more]
AT5G16486.1	2.2e-24	31.86	RNA-directed DNA polymerase (reverse transcriptase)-related family protein	[more]
AT4G04650.1	4.6e-22	32.12	RNA-directed DNA polymerase (reverse transcriptase)-related family protein	[more]
AT5G18880.1	4.6e-22	31.89	RNA-directed DNA polymerase (reverse transcriptase)-related family protein	[more]
AT3G24255.1	6.6e-21	30.30	RNA-directed DNA polymerase (reverse transcriptase)-related family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR026960	Reverse transcriptase zinc-binding domain	PFAM	PF13966	zf-RVT	coord: 118..202 e-value: 9.0E-20 score: 71.2

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
PI0021148	PI0021148	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
PI0021148.1-exon	PI0021148.1-exon-chr05:6742048..6742710	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
PI0021148.1-cds	PI0021148.1-cds-chr05:6742048..6742710	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
PI0021148.1	PI0021148.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006278	RNA-dependent DNA biosynthetic process
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0003964	RNA-directed DNA polymerase activity