PI0021121.1 (mRNA) Melon (PI 482460) v1

Overview


Name	PI0021121.1
Type	mRNA
Organism	Cucumis metuliferus (Melon (PI 482460) v1)
Description	DNA polymerase epsilon subunit C
Location	chr11: 5859077 .. 5864712 (+)
Sequence length	895
RNA-Seq Expression	PI0021121.1
Synteny	PI0021121.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CGAACATTACCAATGGCATCATCCAAAAAATCAAGTACTGAAGCGAAGAGTAAAGAAGCGGGAACCTCAAAGCCAGCCCCCAAAGCCAAGAGCCACAACAATGCCAGAAATTCCGACAAGGACGATTCAAAGAAGAAGAAGAAGAAGAAGAAGATTAGCATTAGCACCAACAATGGCTCTGTCAAGGACAATGAGGCCTTAGCTGTTTCTGCTCCAGGAGGCTCAGCCTCTGAGGACGACGATGCCGCCGATGAAGACAAAGCCGAAACCACAAGTAGAAAACCTAAGACCTCCAAATTGAAGAAAGTTAAACGGAACCATGCCAAGAAAGAAGAAAATGGTTATGCCGAAGAAGAAGAAGAAGCTGAGGAGAAGATTTATAAATTTCCTATGCATCGGATCAAGAAAATCATGAGGGATGAAAATTCTGATTTGCGTATTAATCAGGAAGCTTTGTTTCTCGTCAACAAAGCTTCGGTAAGCCTTTAAACACCATCACAAACGCACGCACGCACGCACCCAAAATTGCTCAATTTTAGCTCTATTGAAGAATTAGGTATTTTTCTAATGAAATTGGGTTTTCTGTGTCTGTAAACTTCTTAATTGTTGCAGGAGATGTTTCTCGTACAATTTTGCAAAGATGCATATACATGCTGTGCTCAGGATCGCAAGAAGTCTCTTGCTTACAAGCATCTATGTAACGTTTCTATGCTCTATTTGGATGCTCCTGTCTATTTTCCTTTGTTGTTATATGCTCCATGTTCATTTGCATCTCTTGCATGGACTCATACGGTTTTGCCTTTGCCCTTCTTGTCAGTTTTCTATAATGAAAGTTAGACCTGTGAACATATTTAAAAAGGGGTAAAACTTGGACCTGAAAACAGTCGATTGGATTCCAGCTCCACTATCTTTCATGGTCATTATGATGGGGCTTTACCTTTTTATGACCTGTACTGTTAACATGATGGTCGTAGTTTAACACGGATTGTGACCTTAGGTATAGGTTACTCCAATTACTTGGTCAAGGGACTTGAATTATGTGAGCATTAATCTATCATACTACCGTGTTGTAGAGGATTGCCGACTTATATTATCGTTGCAAATTTCTACAGCGGCTGAATCCAGCCTTTCGATAAATCATATCATTAAGCCACATTATGTCTGGCTGGATGATTTACTTACTCTAAATATGTCTACCGATAGGCCCCCAATAAGTTCGCATGTATGAGGAGGAATAATTGGTGTAAACAAAGCTAGAATAATTAGTTTTGCTCAGTTAGCTAGTTAGTTAGTTACTATTAGTTTTGCTTAGTTAGCTAGTTAGTTAATCCTTAACTAACTTTGGAATTCCTCCTCTCTATAATAAAGTTCCATTCTCCCTCTTGAAAGGAGAATGACATTCATACAAAATTCCTTTTGATTGTTTACACCAAAATGTGTATCAAAGCACCCAAAAGATTTTGGGACTAAATGGCTGTTTGTAGACCGGTGGAGCAGAGGGACGACAGCCATGTTCAAGAGGTGGAGCCAATCCCCGTCCTCTCTCCAACATCTACCACAAGACGCTTGCTGTCTGTGGAAGCTTTGGTGGAGAGAATAGAAAGGGCACTCAACGAAGTATTGCAAAGGCTCGATGTGGCAGCGCCTCTACAAGAAAATCGTGTTGAACAACCAGCAGTGGTTCAACAATGGGGACAACGAGGTCTCCGAGGAGCTGGGTTTCAAGATTGGGATGAAATCATCAAGATGGAAGATATGGAGTTCAAGATCGAGGAGATTCAATCAAGATTTTCAAGAACCGCCTCCAAGATTCCAAGAATGCAATCAAGATTTCCAAGATTGGAGTTCTTCAAGTGATGATGTTCAAGAAGTTGCAAACGAAGCCAATGGGAGAAGAAATTTTGTTCATTATGGGGATAGAAGGGGAGATTCAACCGAGTTTAAAATGAAGATTGACTTACCAAGCTATGATGGCAAAAGGAATATTGAAGTTTTTCTGGATTGGCTGAGGAATACCGAATTTTTTTTAATTACATGAATACACCCGAGCGAAAGAAAGTTTATTTGGTGGCTTTAAAACTGAAAGGTGGAGCATCAGCTCGGTGGGAATAAGTAGAAGTGAACCGTAGAAAAAATGGCAAGAGACCCATCCTTGCTTGGGAGAAAATGAAGAAATTGATAAAAGCAAGGTTTCTTCCTCCTAACTATGAACAGACAATCTACAACCAATACCAAAGTTTTCGACAGGGAGGTCGGGCCATGGCAGATTACATTGAAGAATTTGACCGTTGGAAGCCCGAACAAATCTTTTGGAGAATGAACAAAGCCTAATTGCTCGCTTTGTTAGTGGACTGCGATTTACCATTAAGCACCAAGCTAGGAAAGAGAATAAGGTAGCTGATGCTTTGAGTAGAAAAAACACCTTATTAACTCTTCTCTCAGCTGAGGTTATTGCGTTCAACCATCTCCCAGAATTGTATGAAAATGATGAAGATTTTGGGAACATTTGGCGAAATTGTGTTAACCATCTCTATGAGGGAGATTTTCACATTGTTGAAGGTTTTCTCTTCAAGAGTGATCAACTATGTATTCCTCACACTTCTCTACGAGAAGCCCTAATCAAAGAAGCCCATGCTGGAGGTTTAGCTGGCCATTTTGGTCAAGATAAAACATTCAAGATTGTTCACTAATAACTTTGTGAAGAAATGTGCTATATGCCAAAGAGCCAAGGGAACTACAACTAATGCTGATCTATATTCCCCTTTACCGATTCCTTTGAACATTTGGGAAGATTTATCAGTCGATTTCGTTATTGGCCTATCCAAAACTCAAAGAGGATTTGATGCAGTTATGGTAGTCGTGGATAGATTCAGCAAAATGGCCCATTTCCTAGCTTGCAAGAAGACTAATGATGCTGTCTATGCGGCCACTCTATTCTTTAGAGAACTTGTGAGACTTTATGGAATACCGAAGACAATTGTATCAGATATGGATATTAAATTCCTTAGCCATCTTTGGAGAACTCTCTGGTTGAAATTTGATACTACACTTAAATTTAGTACTTCCTCACACCCTCAAACCGACAGCCAAACTGAAGTTACTAATAGATCCTTGGGAACTTAATCCAATGCTTGAGTGGATCACACCCAAAACAGTGGGACATGGCCCTTGCCCAAGCAAAATTTGCCTTCAATAACATGAAGAATAGAACTACAGGCAAATGCCCCGTCGATGTAATCTACATTAAGGCTCTTAGACTCACCTTTGACATGGCCAACTTACCTACAGGTATAGATGTACAAAATGAAGCAGAAGAAATGGCAGAGCGTGTACAAAAGCTCCATAAAGAAGTCTATGATCACTTGATGAACAATACAGCTTCTTATAAAGAAAGCAAAGACAAAAAGAGAAGAGAAGTTCAATTTGAAGAAGGTGACCTTGTTATGGCACACCTAAGTTAAAGAAGATTCCCAGCTGGGACCTATGGAAAACTAAAAGACAAGCAGATCGGCCCTTGTAAAGTCTTAGCAAAGTATGACCCTAATGCCTACAAAGTTGAACTACCAGAAGATCTACATATCAGCCCAGTTTTTAATGTAGCTGACTTGAAGAAATTCCATGCACCAGATGAATTTCAGCTTGCTAATCTGGCTCGAGGTCGAGCCTGATGTTAGGGGGGTGGATTATGGTGTAAACAAAGCTAGAATAATTAGTTTTTGCTCAGTTAGCTAGTTAGTTAGTTACTATTAGTTTTGCTTAGTTAGCTAGTTAGTTAGTTATTCCTTAACTAACTTTGTAATTCCTCTACTCTATAAATAAAGTTCCATTCTCCCTCTTGAAAGGAGAATGACATTCACACAAAATTCCTTTTCGTTGTTTACATCAATAATACATAAGCAGTGGTAGCAAAGTTGATAAATTTGATACTTGAGATGGGTATAAGTTGGTTGAGGAGGGGCACTGAAACTGTTGTCAGGAGTCTTTCTTTTGGACAACTTCAAGTTAGGTGGCAAGGGGACAGAAAGATAGAGAATTGGAGAAGTACGTATTTGGGAGTCGAAAATGGGAAATCAGTGTGAATCTATTGTGAAATTTCAATTTGGATCAGGAGAGAAAGCAAATCTCATGGATCTCTTTTAGGCCTCGAGTATTGAAGACATATGTGAGGAAGGGCATATTGGGCAAAGGGATGGAAAAACAAATACATTAATGAGGGAAGGTAGGATCCTGCATGTACTGATGTCAAAAGGCTGGTACATAGGGGAATAAGGCATTTGTGAAAAGGGCAGCTGATATTTTGATGGTGTTTATTCACTAGTGTGGAGGAGAAACAGCTCACTCCTGGAGGCCCTGAGTTTTCTTGATCCGTTTACGTTGTTTGGCTAAATTTGCTTATTCTCTTTGGATTACTAGAGAGAAGGAAAACTCGTGCATCTCTTCCTTTGTTTTCTTCTGTTAACCACTCATAGATGGCAAATTCAAATCTCTCTATCTGGCTAGGCAATTTTATCGAGATGATGCTGAAATTTTGATAAGTCTTCCATTTTACTTATTGTTTCATTTTATCTGCTATTACTATTAGTTTCAATTGTCAGAACTCAGAGGATACTTTTTTTTTTTATTGATTGACCACATTTTGATGGTGGGGAATGTGGGAGGTTGGAAAGGAAAAAAAAGGCCTTTTCTTCTACTCCGACCAGAGTAACCTATCTAGTTATGAAAATATGAATGTCGGATCTGATAGTTCTGGAACCACAGAGCTCTCTTCTATTAAAATTGGGAGAGGAAAAAGAAAACCCTGCTTCTTCAAGTTCAGAATAACTGAGAAACAAAATATGTATACATTGAAATGTTCATTATTAATCTCCATTTTTGAGTTTCTTGTTTGAGCATCATTGAATTTCTAGGCATGTACAGTTTCAAAATGTTCAACTGAAGTGTATCTAACAAAACTTGATAGTGAGGTTATATGCCAATTATTCCTCCCTTTGAGATCGGAGGTTTAATCTTCCATCCCCACCATTGTTGTACTAAATAAATGAATATACCATAATATTTCCTCCCATAGATCAATGTTTATCCTGCTTGAAATCAAAACTTTACAATTTGCTTCCTTGCAATTACCAAACCATTGCTTTAGATGTATTTTCTTGGAAGTAGTAGTAAGATTCTCCTTTGTTGTTGCAGCATCAGTAGTTTCAAAAAGGAAGAGATACGACTTTCTTTCAGGTATATACACTTGACTATACATAATGCTTAAATACTGCTATTATTAGAATGATGCTTCATCTCTAAACCGAAAGACGCCTTATAAAAACGTCACAAATGTTCTTTTTCATCTCCAGATTTTGTTCCAGAGAAGTTAAAATTCGAAGATGCGTTAAAGGAAAGAAGCATGGCAGAATTAGGAAAGGACTAGACTTCTCGATATTTTAATTTGAACACTTAATCTTGTTCCATGGATGTGTTATATATTTAGGTATCTTTCTTGTCATGTCAATGTGAATCCAAGGAAGTTAGATACACCATACAACATACATTTTTTTAAAATTACGTACCTGTAACATGTTTATTGACATCTTAAATCTAATCTAACGTCCATTCTAACATGATTATTCTAATATGCATTTATTGAA

mRNA sequence

CGAACATTACCAATGGCATCATCCAAAAAATCAAGTACTGAAGCGAAGAGTAAAGAAGCGGGAACCTCAAAGCCAGCCCCCAAAGCCAAGAGCCACAACAATGCCAGAAATTCCGACAAGGACGATTCAAAGAAGAAGAAGAAGAAGAAGAAGATTAGCATTAGCACCAACAATGGCTCTGTCAAGGACAATGAGGCCTTAGCTGTTTCTGCTCCAGGAGGCTCAGCCTCTGAGGACGACGATGCCGCCGATGAAGACAAAGCCGAAACCACAAGTAGAAAACCTAAGACCTCCAAATTGAAGAAAGTTAAACGGAACCATGCCAAGAAAGAAGAAAATGGTTATGCCGAAGAAGAAGAAGAAGCTGAGGAGAAGATTTATAAATTTCCTATGCATCGGATCAAGAAAATCATGAGGGATGAAAATTCTGATTTGCGTATTAATCAGGAAGCTTTGTTTCTCGTCAACAAAGCTTCGGAGATGTTTCTCGTACAATTTTGCAAAGATGCATATACATGCTGTGCTCAGGATCGCAAGAAGTCTCTTGCTTACAAGCATCTATCATCAGTAGTTTCAAAAAGGAAGAGATACGACTTTCTTTCAGATTTTGTTCCAGAGAAGTTAAAATTCGAAGATGCGTTAAAGGAAAGAAGCATGGCAGAATTAGGAAAGGACTAGACTTCTCGATATTTTAATTTGAACACTTAATCTTGTTCCATGGATGTGTTATATATTTAGGTATCTTTCTTGTCATGTCAATGTGAATCCAAGGAAGTTAGATACACCATACAACATACATTTTTTTAAAATTACGTACCTGTAACATGTTTATTGACATCTTAAATCTAATCTAACGTCCATTCTAACATGATTATTCTAATATGCATTTATTGAA

Coding sequence (CDS)

ATGGCATCATCCAAAAAATCAAGTACTGAAGCGAAGAGTAAAGAAGCGGGAACCTCAAAGCCAGCCCCCAAAGCCAAGAGCCACAACAATGCCAGAAATTCCGACAAGGACGATTCAAAGAAGAAGAAGAAGAAGAAGAAGATTAGCATTAGCACCAACAATGGCTCTGTCAAGGACAATGAGGCCTTAGCTGTTTCTGCTCCAGGAGGCTCAGCCTCTGAGGACGACGATGCCGCCGATGAAGACAAAGCCGAAACCACAAGTAGAAAACCTAAGACCTCCAAATTGAAGAAAGTTAAACGGAACCATGCCAAGAAAGAAGAAAATGGTTATGCCGAAGAAGAAGAAGAAGCTGAGGAGAAGATTTATAAATTTCCTATGCATCGGATCAAGAAAATCATGAGGGATGAAAATTCTGATTTGCGTATTAATCAGGAAGCTTTGTTTCTCGTCAACAAAGCTTCGGAGATGTTTCTCGTACAATTTTGCAAAGATGCATATACATGCTGTGCTCAGGATCGCAAGAAGTCTCTTGCTTACAAGCATCTATCATCAGTAGTTTCAAAAAGGAAGAGATACGACTTTCTTTCAGATTTTGTTCCAGAGAAGTTAAAATTCGAAGATGCGTTAAAGGAAAGAAGCATGGCAGAATTAGGAAAGGACTAG

Protein sequence

MASSKKSSTEAKSKEAGTSKPAPKAKSHNNARNSDKDDSKKKKKKKKISISTNNGSVKDNEALAVSAPGGSASEDDDAADEDKAETTSRKPKTSKLKKVKRNHAKKEENGYAEEEEEAEEKIYKFPMHRIKKIMRDENSDLRINQEALFLVNKASEMFLVQFCKDAYTCCAQDRKKSLAYKHLSSVVSKRKRYDFLSDFVPEKLKFEDALKERSMAELGKD

Homology

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BLAST of PI0021121.1 vs. ExPASy Swiss-Prot
Match: Q9NRG0 (Chromatin accessibility complex protein 1 OS=Homo sapiens OX=9606 GN=CHRAC1 PE=1 SV=1)

HSP 1 Score: 53.1 bits (126), Expect = 4.5e-06
Identity = 33/107 (30.84%), Postives = 57/107 (53.27%), Query Frame = 0


Query: 114 EEEEAEEKIYKFPMHRIKKIMRDENSDLRINQEALFLVNKASEMFLVQFCKDAYTCCAQD 173
           +++  E+++   P+ RI+ IM+       INQEAL L  KA+E+F+      +Y   +  
Sbjct: 8   KDKGGEQRLISLPLSRIRVIMKSSPEVSSINQEALVLTAKATELFVQCLATYSYRHGSGK 67

Query: 174 RKKSLAYKHLSSVVSKRKRYDFLSDFVPEKL---KFEDALKERSMAE 218
            KK L Y  L++   + + + FL+D +P+K+   K+   LKE    E
Sbjct: 68  EKKVLTYSDLANTAQQSETFQFLADILPKKILASKYLKMLKEEKREE 114

[Close]

BLAST of PI0021121.1 vs. ExPASy Swiss-Prot
Match: Q9V452 (Chromatin accessibility complex 16kD protein OS=Drosophila melanogaster OX=7227 GN=Chrac-16 PE=1 SV=1)

HSP 1 Score: 53.1 bits (126), Expect = 4.5e-06
Identity = 32/90 (35.56%), Postives = 51/90 (56.67%), Query Frame = 0


Query: 126 PMHRIKKIMRDENSDLRINQEALFLVNKASEMFLVQFCKDAYT-CCAQDRKKSLAYKHLS 185
           P+ R++ IM+       I  E LFL+ K +E+F+      AYT    Q   ++L Y+HLS
Sbjct: 21  PLSRVRTIMKSSMDTGLITNEVLFLMTKCTELFVRHLAGAAYTEEFGQRPGEALKYEHLS 80

Query: 186 SVVSKRKRYDFLSDFVPEKLK---FEDALK 212
            VV+K K  +FL   VP+K++   F++ L+
Sbjct: 81  QVVNKNKNLEFLLQIVPQKIRVHQFQEMLR 110

[Close]

BLAST of PI0021121.1 vs. ExPASy Swiss-Prot
Match: Q9JKP8 (Chromatin accessibility complex protein 1 OS=Mus musculus OX=10090 GN=Chrac1 PE=1 SV=1)

HSP 1 Score: 52.8 bits (125), Expect = 5.9e-06
Identity = 34/107 (31.78%), Postives = 57/107 (53.27%), Query Frame = 0


Query: 114 EEEEAEEKIYKFPMHRIKKIMRDENSDLRINQEALFLVNKASEMFLVQFCKDAYTCCAQD 173
           +E+  ++++   P+ RI+ IM+       INQEAL L  KA+E+F+      +Y   +  
Sbjct: 8   KEKCGDQRLVSLPLSRIRVIMKSSPEVSSINQEALVLTAKATELFVQYLATCSYRHGSGK 67

Query: 174 RKKSLAYKHLSSVVSKRKRYDFLSDFVPEKL---KFEDALKERSMAE 218
            KK+L Y  L+S     +   FL+D +P+K+   K+   LKE+   E
Sbjct: 68  AKKALTYSDLASTAEDSETLQFLADILPKKILASKYLKMLKEKREEE 114

[Close]

BLAST of PI0021121.1 vs. ExPASy Swiss-Prot
Match: Q8LCG7 (Nuclear transcription factor Y subunit C-2 OS=Arabidopsis thaliana OX=3702 GN=NFYC2 PE=1 SV=2)

HSP 1 Score: 49.3 bits (116), Expect = 6.5e-05
Identity = 31/107 (28.97%), Postives = 56/107 (52.34%), Query Frame = 0


Query: 109 NGYAEEEEEAEEKIYKFPMHRIKKIMRDENSDLRINQEALFLVNKASEMFLVQFCKDAYT 168
           N   E E   + K +  P+ RIKKIM+ +     I+ EA  +  KA EMF+++    A+ 
Sbjct: 61  NQMQEIEHTTDFKNHTLPLARIKKIMKADEDVRMISAEAPVIFAKACEMFILELTLRAWI 120

Query: 169 CCAQDRKKSLAYKHLSSVVSKRKRYDFLSDFVPEKLKFEDALKERSM 216
              ++++++L    +++ +S+   +DFL D +P      D LKE  +
Sbjct: 121 HTEENKRRTLQKNDIAAAISRTDVFDFLVDIIP-----RDELKEEGL 162

[Close]

BLAST of PI0021121.1 vs. ExPASy Swiss-Prot
Match: P79007 (Transcriptional activator hap5 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=hap5 PE=2 SV=1)

HSP 1 Score: 48.5 bits (114), Expect = 1.1e-04
Identity = 28/89 (31.46%), Postives = 51/89 (57.30%), Query Frame = 0


Query: 114 EEEEAEEKIYKFPMHRIKKIMR--DENSDLRINQEALFLVNKASEMFLVQFCKDAYTCCA 173
           E ++   K    P+ RIKK+M+  D+  +  I+ EA FL  K SE+F+ +    A+    
Sbjct: 98  EHDDQAVKTLHLPLARIKKVMKTDDDVKNKMISAEAPFLFAKGSEIFIAELTMRAWLHAK 157

Query: 174 QDRKKSLAYKHLSSVVSKRKRYDFLSDFV 201
           ++++++L    +++ VSK + YDFL D +
Sbjct: 158 KNQRRTLQRSDIANAVSKSEMYDFLIDII 186

[Close]

BLAST of PI0021121.1 vs. ExPASy TrEMBL
Match: A0A1S3CKU7 (DNA polymerase epsilon subunit C OS=Cucumis melo OX=3656 GN=LOC103501940 PE=4 SV=1)

HSP 1 Score: 369.4 bits (947), Expect = 1.1e-98
Identity = 209/222 (94.14%), Postives = 213/222 (95.95%), Query Frame = 0


Query: 1   MASSKKSSTEAKSKEAGTSKPAPKAKSHNNARNSDKDDSKKKKKKKKISISTNNGSVKDN 60
           MASSKKSSTEAK KEAGTSKPAPKAK+HNNARNSDK+ SKKKKKKKKISISTNNGSVKDN
Sbjct: 1   MASSKKSSTEAKGKEAGTSKPAPKAKTHNNARNSDKEISKKKKKKKKISISTNNGSVKDN 60

Query: 61  EALAVSAPGGSASEDDDAADEDKAETTSRKPKTSKLKKVKRNHAKKEENGYA-EEEEEAE 120
           E LAVS PGGSASEDDDAADEDKAETTSRK KTSK KKVKRNHAK+E+NGYA EEEEEAE
Sbjct: 61  EVLAVSPPGGSASEDDDAADEDKAETTSRKHKTSKSKKVKRNHAKEEDNGYAEEEEEEAE 120

Query: 121 EKIYKFPMHRIKKIMRDENSDLRINQEALFLVNKASEMFLVQFCKDAYTCCAQDRKKSLA 180
           EKIYKFPMHRIKKIMRDENSDLRINQEALFLVNKASEMFLVQFCKDAY CCAQDRKKSLA
Sbjct: 121 EKIYKFPMHRIKKIMRDENSDLRINQEALFLVNKASEMFLVQFCKDAYACCAQDRKKSLA 180

Query: 181 YKHLSSVVSKRKRYDFLSDFVPEKLKFEDALKERSMAELGKD 222
           YKHLSSVVSKRKRYDFLSDFVPEKLKFEDALKERSMAE GKD
Sbjct: 181 YKHLSSVVSKRKRYDFLSDFVPEKLKFEDALKERSMAESGKD 222

[Close]

BLAST of PI0021121.1 vs. ExPASy TrEMBL
Match: A0A0A0KCQ2 (CBFD_NFYB_HMF domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G294440 PE=4 SV=1)

HSP 1 Score: 352.4 bits (903), Expect = 1.3e-93
Identity = 204/223 (91.48%), Postives = 208/223 (93.27%), Query Frame = 0


Query: 1   MASSKKSSTEAKSKEAGTSKPAPKAKSHNNARNSDKDDSKKKKKKKK--ISISTNNGSVK 60
           MASSKKSSTEAKSKE GTSKP+PKAK+HNNARNSDKD SKKKKKKKK  ISISTNNGSVK
Sbjct: 1   MASSKKSSTEAKSKEVGTSKPSPKAKTHNNARNSDKDISKKKKKKKKISISISTNNGSVK 60

Query: 61  DNEALAVSAPGGSASEDDDAADEDKAETTSRKPKTSKLKKVKRNHAKKEENGYAEEEEEA 120
           DN ALAVSAPG SASED DAADEDKAETTSRK  TSK KKVKRNHAK+E+N YA  EEEA
Sbjct: 61  DNHALAVSAPGASASEDADAADEDKAETTSRKSNTSKSKKVKRNHAKEEDNRYA-AEEEA 120

Query: 121 EEKIYKFPMHRIKKIMRDENSDLRINQEALFLVNKASEMFLVQFCKDAYTCCAQDRKKSL 180
           EEKIYKFPMHRIKKIMRDENSDLRINQEALFLVNKASEMFLVQFCKDAY CCAQDRKKSL
Sbjct: 121 EEKIYKFPMHRIKKIMRDENSDLRINQEALFLVNKASEMFLVQFCKDAYACCAQDRKKSL 180

Query: 181 AYKHLSSVVSKRKRYDFLSDFVPEKLKFEDALKERSMAELGKD 222
           AYKHLSSVVSKRKRYDFLSDFVPEKLKFEDALKERSMAE GKD
Sbjct: 181 AYKHLSSVVSKRKRYDFLSDFVPEKLKFEDALKERSMAESGKD 222

[Close]

BLAST of PI0021121.1 vs. ExPASy TrEMBL
Match: A0A5A7T1L3 (DNA polymerase epsilon subunit C OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold84G00250 PE=4 SV=1)

HSP 1 Score: 302.4 bits (773), Expect = 1.6e-78
Identity = 173/187 (92.51%), Postives = 178/187 (95.19%), Query Frame = 0


Query: 1   MASSKKSSTEAKSKEAGTSKPAPKAKSHNNARNSDKDDSKKKKKKKKISISTNNGSVKDN 60
           MASSKKSSTEAK KEAGTSKPAPKAK+HNNARNSDK+ SKKKKKKKKISISTNNGSVKDN
Sbjct: 1   MASSKKSSTEAKGKEAGTSKPAPKAKTHNNARNSDKEISKKKKKKKKISISTNNGSVKDN 60

Query: 61  EALAVSAPGGSASEDDDAADEDKAETTSRKPKTSKLKKVKRNHAKKEENGYA-EEEEEAE 120
           E LAVS PGGSASEDDDAADEDKAETTSRK KTSK KKVKRNHAK+E+NGYA EEEEEAE
Sbjct: 61  EVLAVSPPGGSASEDDDAADEDKAETTSRKHKTSKSKKVKRNHAKEEDNGYAEEEEEEAE 120

Query: 121 EKIYKFPMHRIKKIMRDENSDLRINQEALFLVNKASEMFLVQFCKDAYTCCAQDRKKSLA 180
           EKIYKFPMHRIKKIMRDENSDLRINQEALFLVNKASEMFLVQFCKDAY CCAQDRKKSLA
Sbjct: 121 EKIYKFPMHRIKKIMRDENSDLRINQEALFLVNKASEMFLVQFCKDAYACCAQDRKKSLA 180

Query: 181 YKHLSSV 187
           YKHL +V
Sbjct: 181 YKHLCNV 187

[Close]

BLAST of PI0021121.1 vs. ExPASy TrEMBL
Match: A0A6J1JF10 (DNA polymerase epsilon subunit C-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111483919 PE=4 SV=1)

HSP 1 Score: 297.4 bits (760), Expect = 5.1e-77
Identity = 179/236 (75.85%), Postives = 190/236 (80.51%), Query Frame = 0


Query: 1   MASSKKSSTEAKSKEAGTSKPAPKAKSH-------NNARNSDKDDSKKKKKKKKISISTN 60
           MASSKKSS+EAKSKEAGTSKPAPK K+H       NNAR  DK  SKKKK     +  T+
Sbjct: 1   MASSKKSSSEAKSKEAGTSKPAPKNKTHNNNNNNNNNARKVDKVYSKKKKVSSNNNKHTS 60

Query: 61  NGSVKDNEALAVSAPGGSASEDDDAADEDKAETTSRKPKTSKLKKVKRNHAKKEENGYAE 120
           NGSVK+NE L +SAPG         A+ED+ ETTS+ P TSK KKVKRNH KKEENGYAE
Sbjct: 61  NGSVKENEVLPISAPGD--------AEEDRVETTSKSPNTSKSKKVKRNHGKKEENGYAE 120

Query: 121 E--------EEEAEEKIYKFPMHRIKKIMRDENSDLRINQEALFLVNKASEMFLVQFCKD 180
           E        EEEAEEKIYKFPM+RIKKIMRDENSDLRINQEALFLVNKA+EMFLVQFCKD
Sbjct: 121 EEEEEEEEAEEEAEEKIYKFPMNRIKKIMRDENSDLRINQEALFLVNKATEMFLVQFCKD 180

Query: 181 AYTCCAQDRKKSLAYKHLSSVVSKRKRYDFLSDFVPEKLKFEDALKERSMAELGKD 222
           AY CCAQDRKKSLAYKHLSSVV KRKRYDFLSDFVPEKLKFEDALKERSMAE GKD
Sbjct: 181 AYACCAQDRKKSLAYKHLSSVVCKRKRYDFLSDFVPEKLKFEDALKERSMAESGKD 228

[Close]

BLAST of PI0021121.1 vs. ExPASy TrEMBL
Match: A0A6J1FVY8 (DNA polymerase epsilon subunit C-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111448974 PE=4 SV=1)

HSP 1 Score: 291.2 bits (744), Expect = 3.6e-75
Identity = 176/226 (77.88%), Postives = 188/226 (83.19%), Query Frame = 0


Query: 1   MASSKKSSTEAKSKEAGTSKPAPKAKSH-NNARNSDKDDSKKKKKKKKISISTNNGSVKD 60
           MASSKKSS+EAKSKEAGTSKPAP  K+H NNAR  DK  SKKKK     +  T+NGSVK+
Sbjct: 1   MASSKKSSSEAKSKEAGTSKPAPNNKTHNNNARTIDKVYSKKKKVSNS-NKHTSNGSVKE 60

Query: 61  NEALAVSAPGGSASEDDDAADEDKAETTSRKPKTSKLKKVKRNHAKKEENGYAEE----E 120
           NE L +SAPG         A+ED+AETTS+ P TSK KKVKRN  KKE+NGY EE    E
Sbjct: 61  NEVLPISAPGD--------AEEDRAETTSKSPNTSKSKKVKRNRGKKEQNGYVEEEEEAE 120

Query: 121 EEAEEKIYKFPMHRIKKIMRDENSDLRINQEALFLVNKASEMFLVQFCKDAYTCCAQDRK 180
           EEAEEKIYKFPM+RIKKIMRDENSDLRINQEALFLVNKA+EMFLVQFCKDAY CCAQDRK
Sbjct: 121 EEAEEKIYKFPMNRIKKIMRDENSDLRINQEALFLVNKATEMFLVQFCKDAYACCAQDRK 180

Query: 181 KSLAYKHLSSVVSKRKRYDFLSDFVPEKLKFEDALKERSMAELGKD 222
           KSLAYKHLSSVV KRKRYDFLSDFVPEKLKFEDALKERSMAE GKD
Sbjct: 181 KSLAYKHLSSVVCKRKRYDFLSDFVPEKLKFEDALKERSMAESGKD 217

[Close]

BLAST of PI0021121.1 vs. NCBI nr
Match: XP_008463933.1 (PREDICTED: DNA polymerase epsilon subunit C [Cucumis melo])

HSP 1 Score: 369.4 bits (947), Expect = 2.2e-98
Identity = 209/222 (94.14%), Postives = 213/222 (95.95%), Query Frame = 0


Query: 1   MASSKKSSTEAKSKEAGTSKPAPKAKSHNNARNSDKDDSKKKKKKKKISISTNNGSVKDN 60
           MASSKKSSTEAK KEAGTSKPAPKAK+HNNARNSDK+ SKKKKKKKKISISTNNGSVKDN
Sbjct: 1   MASSKKSSTEAKGKEAGTSKPAPKAKTHNNARNSDKEISKKKKKKKKISISTNNGSVKDN 60

Query: 61  EALAVSAPGGSASEDDDAADEDKAETTSRKPKTSKLKKVKRNHAKKEENGYA-EEEEEAE 120
           E LAVS PGGSASEDDDAADEDKAETTSRK KTSK KKVKRNHAK+E+NGYA EEEEEAE
Sbjct: 61  EVLAVSPPGGSASEDDDAADEDKAETTSRKHKTSKSKKVKRNHAKEEDNGYAEEEEEEAE 120

Query: 121 EKIYKFPMHRIKKIMRDENSDLRINQEALFLVNKASEMFLVQFCKDAYTCCAQDRKKSLA 180
           EKIYKFPMHRIKKIMRDENSDLRINQEALFLVNKASEMFLVQFCKDAY CCAQDRKKSLA
Sbjct: 121 EKIYKFPMHRIKKIMRDENSDLRINQEALFLVNKASEMFLVQFCKDAYACCAQDRKKSLA 180

Query: 181 YKHLSSVVSKRKRYDFLSDFVPEKLKFEDALKERSMAELGKD 222
           YKHLSSVVSKRKRYDFLSDFVPEKLKFEDALKERSMAE GKD
Sbjct: 181 YKHLSSVVSKRKRYDFLSDFVPEKLKFEDALKERSMAESGKD 222

[Close]

BLAST of PI0021121.1 vs. NCBI nr
Match: XP_004149539.2 (chromatin accessibility complex protein 1 isoform X1 [Cucumis sativus])

HSP 1 Score: 352.4 bits (903), Expect = 2.8e-93
Identity = 204/223 (91.48%), Postives = 208/223 (93.27%), Query Frame = 0


Query: 1   MASSKKSSTEAKSKEAGTSKPAPKAKSHNNARNSDKDDSKKKKKKKK--ISISTNNGSVK 60
           MASSKKSSTEAKSKE GTSKP+PKAK+HNNARNSDKD SKKKKKKKK  ISISTNNGSVK
Sbjct: 1   MASSKKSSTEAKSKEVGTSKPSPKAKTHNNARNSDKDISKKKKKKKKISISISTNNGSVK 60

Query: 61  DNEALAVSAPGGSASEDDDAADEDKAETTSRKPKTSKLKKVKRNHAKKEENGYAEEEEEA 120
           DN ALAVSAPG SASED DAADEDKAETTSRK  TSK KKVKRNHAK+E+N YA  EEEA
Sbjct: 61  DNHALAVSAPGASASEDADAADEDKAETTSRKSNTSKSKKVKRNHAKEEDNRYA-AEEEA 120

Query: 121 EEKIYKFPMHRIKKIMRDENSDLRINQEALFLVNKASEMFLVQFCKDAYTCCAQDRKKSL 180
           EEKIYKFPMHRIKKIMRDENSDLRINQEALFLVNKASEMFLVQFCKDAY CCAQDRKKSL
Sbjct: 121 EEKIYKFPMHRIKKIMRDENSDLRINQEALFLVNKASEMFLVQFCKDAYACCAQDRKKSL 180

Query: 181 AYKHLSSVVSKRKRYDFLSDFVPEKLKFEDALKERSMAELGKD 222
           AYKHLSSVVSKRKRYDFLSDFVPEKLKFEDALKERSMAE GKD
Sbjct: 181 AYKHLSSVVSKRKRYDFLSDFVPEKLKFEDALKERSMAESGKD 222

[Close]

BLAST of PI0021121.1 vs. NCBI nr
Match: XP_038902902.1 (DNA polymerase epsilon subunit C [Benincasa hispida])

HSP 1 Score: 334.7 bits (857), Expect = 5.9e-88
Identity = 192/222 (86.49%), Postives = 201/222 (90.54%), Query Frame = 0


Query: 1   MASSKKSSTEAKSKEAGTSKPAPKAKSHNNARNSDKDDSKKKKKKKKISISTNNGSVKDN 60
           MASSKKSSTEAKSKEAGTSKP PK K+HNNAR SDKDDS KKKKKKK  IST NGSVKDN
Sbjct: 44  MASSKKSSTEAKSKEAGTSKPTPKTKTHNNARKSDKDDSNKKKKKKK-KISTINGSVKDN 103

Query: 61  EALAVSAPGGSASEDDDAADEDKAETTSRKPKTSKLKKVKRNHAKKEENGY-AEEEEEAE 120
           EALA S PG +++ ++  ADED+AETTS KP TSK KKV+RNH KKEENGY AEEEEEAE
Sbjct: 104 EALATSPPGSASASEEVDADEDRAETTSGKPNTSKSKKVQRNHVKKEENGYAAEEEEEAE 163

Query: 121 EKIYKFPMHRIKKIMRDENSDLRINQEALFLVNKASEMFLVQFCKDAYTCCAQDRKKSLA 180
           EKIYKFPMHRIKKIMRDENSDLRINQEALFLVNKASEMFLVQFCKDAY CCAQDRKKSLA
Sbjct: 164 EKIYKFPMHRIKKIMRDENSDLRINQEALFLVNKASEMFLVQFCKDAYACCAQDRKKSLA 223

Query: 181 YKHLSSVVSKRKRYDFLSDFVPEKLKFEDALKERSMAELGKD 222
           YKHLSSVV KRKRYDFLSDFVPEKLKFEDALKER+MAE GKD
Sbjct: 224 YKHLSSVVCKRKRYDFLSDFVPEKLKFEDALKERNMAESGKD 264

[Close]

BLAST of PI0021121.1 vs. NCBI nr
Match: KAA0035335.1 (DNA polymerase epsilon subunit C [Cucumis melo var. makuwa] >TYK14302.1 DNA polymerase epsilon subunit C [Cucumis melo var. makuwa])

HSP 1 Score: 302.4 bits (773), Expect = 3.3e-78
Identity = 173/187 (92.51%), Postives = 178/187 (95.19%), Query Frame = 0


Query: 1   MASSKKSSTEAKSKEAGTSKPAPKAKSHNNARNSDKDDSKKKKKKKKISISTNNGSVKDN 60
           MASSKKSSTEAK KEAGTSKPAPKAK+HNNARNSDK+ SKKKKKKKKISISTNNGSVKDN
Sbjct: 1   MASSKKSSTEAKGKEAGTSKPAPKAKTHNNARNSDKEISKKKKKKKKISISTNNGSVKDN 60

Query: 61  EALAVSAPGGSASEDDDAADEDKAETTSRKPKTSKLKKVKRNHAKKEENGYA-EEEEEAE 120
           E LAVS PGGSASEDDDAADEDKAETTSRK KTSK KKVKRNHAK+E+NGYA EEEEEAE
Sbjct: 61  EVLAVSPPGGSASEDDDAADEDKAETTSRKHKTSKSKKVKRNHAKEEDNGYAEEEEEEAE 120

Query: 121 EKIYKFPMHRIKKIMRDENSDLRINQEALFLVNKASEMFLVQFCKDAYTCCAQDRKKSLA 180
           EKIYKFPMHRIKKIMRDENSDLRINQEALFLVNKASEMFLVQFCKDAY CCAQDRKKSLA
Sbjct: 121 EKIYKFPMHRIKKIMRDENSDLRINQEALFLVNKASEMFLVQFCKDAYACCAQDRKKSLA 180

Query: 181 YKHLSSV 187
           YKHL +V
Sbjct: 181 YKHLCNV 187

[Close]

BLAST of PI0021121.1 vs. NCBI nr
Match: XP_022986059.1 (DNA polymerase epsilon subunit C-like isoform X1 [Cucurbita maxima])

HSP 1 Score: 297.4 bits (760), Expect = 1.1e-76
Identity = 179/236 (75.85%), Postives = 190/236 (80.51%), Query Frame = 0


Query: 1   MASSKKSSTEAKSKEAGTSKPAPKAKSH-------NNARNSDKDDSKKKKKKKKISISTN 60
           MASSKKSS+EAKSKEAGTSKPAPK K+H       NNAR  DK  SKKKK     +  T+
Sbjct: 1   MASSKKSSSEAKSKEAGTSKPAPKNKTHNNNNNNNNNARKVDKVYSKKKKVSSNNNKHTS 60

Query: 61  NGSVKDNEALAVSAPGGSASEDDDAADEDKAETTSRKPKTSKLKKVKRNHAKKEENGYAE 120
           NGSVK+NE L +SAPG         A+ED+ ETTS+ P TSK KKVKRNH KKEENGYAE
Sbjct: 61  NGSVKENEVLPISAPGD--------AEEDRVETTSKSPNTSKSKKVKRNHGKKEENGYAE 120

Query: 121 E--------EEEAEEKIYKFPMHRIKKIMRDENSDLRINQEALFLVNKASEMFLVQFCKD 180
           E        EEEAEEKIYKFPM+RIKKIMRDENSDLRINQEALFLVNKA+EMFLVQFCKD
Sbjct: 121 EEEEEEEEAEEEAEEKIYKFPMNRIKKIMRDENSDLRINQEALFLVNKATEMFLVQFCKD 180

Query: 181 AYTCCAQDRKKSLAYKHLSSVVSKRKRYDFLSDFVPEKLKFEDALKERSMAELGKD 222
           AY CCAQDRKKSLAYKHLSSVV KRKRYDFLSDFVPEKLKFEDALKERSMAE GKD
Sbjct: 181 AYACCAQDRKKSLAYKHLSSVVCKRKRYDFLSDFVPEKLKFEDALKERSMAESGKD 228

[Close]

BLAST of PI0021121.1 vs. TAIR 10
Match: AT1G07980.1 (nuclear factor Y, subunit C10 )

HSP 1 Score: 90.9 bits (224), Expect = 1.4e-18
Identity = 80/215 (37.21%), Postives = 120/215 (55.81%), Query Frame = 0


Query: 7   SSTEAKSKEAGTSKPAPKAKSHNNARNSDKDDSKKKKKKKKISISTNNGSVKDNEALAVS 66
           SS + K K+A +     KA    + R+     S+ KK   K++I      + +   ++ S
Sbjct: 3   SSKKPKEKKARSDVVVNKA----SGRSKRSSGSRTKKTSNKVNIVKKKPEIYE---ISES 62

Query: 67  APGGSASEDDDAADEDKAETTSRKPKTSKLKKVKRNHAKKEENGYAEEEEEAEEKIYKFP 126
           +   S  E     +  K+     K    K   +    +K  E    E++  AE+   KFP
Sbjct: 63  SSSDSVEEAIRGDEAKKSNGVVSKRGNGKSVGIPTKTSKNRE----EDDGGAEDAKIKFP 122

Query: 127 MHRIKKIMRDENSDLRINQEALFLVNKASEMFLVQFCKDAYTCCAQDRKKSLAYKHLSSV 186
           M+RI++IMR +NS  +I Q+A+FLVNKA+EMF+ +F ++AY    +D+KK + YKHLSSV
Sbjct: 123 MNRIRRIMRSDNSAPQIMQDAVFLVNKATEMFIERFSEEAYDSSVKDKKKFIHYKHLSSV 182

Query: 187 VSKRKRYDFLSDFVPEKLKFEDALK--ERSMAELG 220
           VS  +RY+FL+D VPEKLK E AL+  ER M + G
Sbjct: 183 VSNDQRYEFLADSVPEKLKAEAALEEWERGMTDAG 206

[Close]

BLAST of PI0021121.1 vs. TAIR 10
Match: AT1G56170.1 (nuclear factor Y, subunit C2 )

HSP 1 Score: 49.3 bits (116), Expect = 4.6e-06
Identity = 31/107 (28.97%), Postives = 56/107 (52.34%), Query Frame = 0


Query: 109 NGYAEEEEEAEEKIYKFPMHRIKKIMRDENSDLRINQEALFLVNKASEMFLVQFCKDAYT 168
           N   E E   + K +  P+ RIKKIM+ +     I+ EA  +  KA EMF+++    A+ 
Sbjct: 61  NQMQEIEHTTDFKNHTLPLARIKKIMKADEDVRMISAEAPVIFAKACEMFILELTLRAWI 120

Query: 169 CCAQDRKKSLAYKHLSSVVSKRKRYDFLSDFVPEKLKFEDALKERSM 216
              ++++++L    +++ +S+   +DFL D +P      D LKE  +
Sbjct: 121 HTEENKRRTLQKNDIAAAISRTDVFDFLVDIIP-----RDELKEEGL 162

[Close]

BLAST of PI0021121.1 vs. TAIR 10
Match: AT1G56170.2 (nuclear factor Y, subunit C2 )

HSP 1 Score: 49.3 bits (116), Expect = 4.6e-06
Identity = 31/107 (28.97%), Postives = 56/107 (52.34%), Query Frame = 0


Query: 109 NGYAEEEEEAEEKIYKFPMHRIKKIMRDENSDLRINQEALFLVNKASEMFLVQFCKDAYT 168
           N   E E   + K +  P+ RIKKIM+ +     I+ EA  +  KA EMF+++    A+ 
Sbjct: 61  NQMQEIEHTTDFKNHTLPLARIKKIMKADEDVRMISAEAPVIFAKACEMFILELTLRAWI 120

Query: 169 CCAQDRKKSLAYKHLSSVVSKRKRYDFLSDFVPEKLKFEDALKERSM 216
              ++++++L    +++ +S+   +DFL D +P      D LKE  +
Sbjct: 121 HTEENKRRTLQKNDIAAAISRTDVFDFLVDIIP-----RDELKEEGL 162

[Close]

BLAST of PI0021121.1 vs. TAIR 10
Match: AT1G08970.4 (nuclear factor Y, subunit C9 )

HSP 1 Score: 48.5 bits (114), Expect = 7.9e-06
Identity = 27/96 (28.12%), Postives = 55/96 (57.29%), Query Frame = 0


Query: 108 ENGYAEEEEEAEEKIYKFPMHRIKKIMRDENSDLRINQEALFLVNKASEMFLVQFCKDAY 167
           EN + E E+  + K +  P+ RIKKIM+ +     I+ EA  +  +A EMF+++    ++
Sbjct: 64  ENQFKEIEKTTDFKNHSLPLARIKKIMKADEDVRMISAEAPVVFARACEMFILELTLRSW 123

Query: 168 TCCAQDRKKSLAYKHLSSVVSKRKRYDFLSDFVPEK 204
               ++++++L    +++ V++   +DFL D VP +
Sbjct: 124 NHTEENKRRTLQKNDIAAAVTRTDIFDFLVDIVPRE 159

[Close]

BLAST of PI0021121.1 vs. TAIR 10
Match: AT1G08970.1 (nuclear factor Y, subunit C9 )

HSP 1 Score: 48.5 bits (114), Expect = 7.9e-06
Identity = 27/96 (28.12%), Postives = 55/96 (57.29%), Query Frame = 0


Query: 108 ENGYAEEEEEAEEKIYKFPMHRIKKIMRDENSDLRINQEALFLVNKASEMFLVQFCKDAY 167
           EN + E E+  + K +  P+ RIKKIM+ +     I+ EA  +  +A EMF+++    ++
Sbjct: 64  ENQFKEIEKTTDFKNHSLPLARIKKIMKADEDVRMISAEAPVVFARACEMFILELTLRSW 123

Query: 168 TCCAQDRKKSLAYKHLSSVVSKRKRYDFLSDFVPEK 204
               ++++++L    +++ V++   +DFL D VP +
Sbjct: 124 NHTEENKRRTLQKNDIAAAVTRTDIFDFLVDIVPRE 159

The following BLAST results are available for this feature:

BLAST of PI0021121.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9NRG0	4.5e-06	30.84	Chromatin accessibility complex protein 1 OS=Homo sapiens OX=9606 GN=CHRAC1 PE=1...	[more]
Q9V452	4.5e-06	35.56	Chromatin accessibility complex 16kD protein OS=Drosophila melanogaster OX=7227 ...	[more]
Q9JKP8	5.9e-06	31.78	Chromatin accessibility complex protein 1 OS=Mus musculus OX=10090 GN=Chrac1 PE=...	[more]
Q8LCG7	6.5e-05	28.97	Nuclear transcription factor Y subunit C-2 OS=Arabidopsis thaliana OX=3702 GN=NF...	[more]
P79007	1.1e-04	31.46	Transcriptional activator hap5 OS=Schizosaccharomyces pombe (strain 972 / ATCC 2...	[more]

BLAST of PI0021121.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3CKU7	1.1e-98	94.14	DNA polymerase epsilon subunit C OS=Cucumis melo OX=3656 GN=LOC103501940 PE=4 SV...	[more]
A0A0A0KCQ2	1.3e-93	91.48	CBFD_NFYB_HMF domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G2944...	[more]
A0A5A7T1L3	1.6e-78	92.51	DNA polymerase epsilon subunit C OS=Cucumis melo var. makuwa OX=1194695 GN=E5676...	[more]
A0A6J1JF10	5.1e-77	75.85	DNA polymerase epsilon subunit C-like isoform X1 OS=Cucurbita maxima OX=3661 GN=...	[more]
A0A6J1FVY8	3.6e-75	77.88	DNA polymerase epsilon subunit C-like isoform X1 OS=Cucurbita moschata OX=3662 G...	[more]

BLAST of PI0021121.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008463933.1	2.2e-98	94.14	PREDICTED: DNA polymerase epsilon subunit C [Cucumis melo]	[more]
XP_004149539.2	2.8e-93	91.48	chromatin accessibility complex protein 1 isoform X1 [Cucumis sativus]	[more]
XP_038902902.1	5.9e-88	86.49	DNA polymerase epsilon subunit C [Benincasa hispida]	[more]
KAA0035335.1	3.3e-78	92.51	DNA polymerase epsilon subunit C [Cucumis melo var. makuwa] >TYK14302.1 DNA poly...	[more]
XP_022986059.1	1.1e-76	75.85	DNA polymerase epsilon subunit C-like isoform X1 [Cucurbita maxima]	[more]

BLAST of PI0021121.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G07980.1	1.4e-18	37.21	nuclear factor Y, subunit C10	[more]
AT1G56170.1	4.6e-06	28.97	nuclear factor Y, subunit C2	[more]
AT1G56170.2	4.6e-06	28.97	nuclear factor Y, subunit C2	[more]
AT1G08970.4	7.9e-06	28.13	nuclear factor Y, subunit C9	[more]
AT1G08970.1	7.9e-06	28.13	nuclear factor Y, subunit C9	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 101..121
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 103..118
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..118
None	No IPR available	PANTHER	PTHR10252:SF93	HISTONE-LIKE TRANSCRIPTION FACTOR AND ARCHAEAL HISTONE FAMILY PROTEIN, EXPRESSED	coord: 11..215
None	No IPR available	PANTHER	PTHR10252	HISTONE-LIKE TRANSCRIPTION FACTOR CCAAT-RELATED	coord: 11..215
IPR003958	Transcription factor CBF/NF-Y/archaeal histone domain	PFAM	PF00808	CBFD_NFYB_HMF	coord: 124..187 e-value: 2.0E-16 score: 60.0
IPR009072	Histone-fold	GENE3D	1.10.20.10	Histone, subunit A	coord: 80..202 e-value: 1.1E-24 score: 88.9
IPR009072	Histone-fold	SUPERFAMILY	47113	Histone-fold	coord: 124..201

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
PI0021121	PI0021121	gene

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
PI0021121.1-five_prime_utr	PI0021121.1-five_prime_utr-chr11:5859077..5859088	five_prime_UTR

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
PI0021121.1-exon	PI0021121.1-exon-chr11:5859077..5859553	exon
PI0021121.1-exon	PI0021121.1-exon-chr11:5859689..5859773	exon
PI0021121.1-exon	PI0021121.1-exon-chr11:5864264..5864305	exon
PI0021121.1-exon	PI0021121.1-exon-chr11:5864422..5864712	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
PI0021121.1-cds	PI0021121.1-cds-chr11:5859089..5859553	CDS
PI0021121.1-cds	PI0021121.1-cds-chr11:5859689..5859773	CDS
PI0021121.1-cds	PI0021121.1-cds-chr11:5864264..5864305	CDS
PI0021121.1-cds	PI0021121.1-cds-chr11:5864422..5864495	CDS

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
PI0021121.1-three_prime_utr	PI0021121.1-three_prime_utr-chr11:5864496..5864712	three_prime_UTR

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
PI0021121.1	PI0021121.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0046982	protein heterodimerization activity