PI0020611.1 (mRNA) Melon (PI 482460) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CAACACTAGAAAGTGAGGAAACCCATCGCGAAATATTGCCTTGGAGAAGACGAAAACCCCTAAATCCTCCATTAATACGACCTCAATCCTCTCCCTTTTACTCATCGGAGATCCTTATTTTGCCCCTTCATTCCCTTTCTTCTTCACCCAATATGTTTAGGAATCAGTACGATACCGATGTCACCACATGGAGTCCCGCCGGTAGGTTGTTTCAGGTTGAGTACGCCATGGAGGCCGTCAAGCAAGGCTCCGCCGCCATTGGCCTCCGATCCAACACCCATGTGGTTCTAGCCTGCGTTAATAAGGCTAACTCTGAACTATCCTCTCACCAGAAGAAGATCTTCAAAGTCGACGATCACATCGGCGTCGCCATTTCCGGCCTTACTGCTGATGGACGCGTTCTTTCTCGTTATATGAGATCTGAATGTATCAATTACAGCTACACCTATGAATCTCCGCTTCCTGTTGGTCGTCTCGTAGTTCAACTCGCTGATAAGGCTCAGGTTTGTGTACGGAAGCCCTCGTTCTGTTTACCATTTGCTCCTCCCTTTTGATTTCTTATGCATTTCTTGAATTTTAGATGTCTCTGCTGTGGCTTCACATTTGTTTGGATTTATTTTGTTAGTGATGGGTTTGGTTCTGAATTTACCAATTATTTTAGCTGGATAGTTAAAGGTGGAACTTTTCAGATTATTATGCTCCCTACTAAGCTGAGGATTATAATGTCAAATTTATCTTTAGTCCGAAACCGAGGTTAAGTAAAATTTTAGAGATGGGGGAATATCGCCCTCTGTACCCTCTAATTTTCAGCATTTTGAGTTTTTAAAGGCAGCTTCCGTTTGCCTATCTTATGTTGTTTGTCTTTGTTCCACTGATTCTTAACTGCTGCCCAGTAGTAGAAGCAGATTAGGACTTTCAGCTCTCCAAATTGTTTGATTATTCTAATTGTTGAATTGGTTTGAATCCACCTAGCTTTGCTGGTAATTTGTTCTTTCTAAATTATTGTATTTTGTTGTTCAATAGTTTAGGTTTTTAGTAAAAGCCAGGAAGTTGAGTAATTATTCAGGGTCATAATGTATGTATCACTTTTTATGACACCATTTGATGTATTAGAGATTAAAAAATGTTTTTGGTGGTCATGGGGTGGGATAGCTCGCTATAATTTCTTCGGTATAGAAAGGTCTTTATGGAGTCACGAATGTTGAATTTTGTTATGTGTACATATATGTCATGTCATCGAAGGACTGAGTTGTGAACAAGAAATGTTTGCACTATCTTCGATCAATAACCTAAGGAGCTTTTTCTTTCATTGTATCTTATGGAAGTTCAGTTTCTTACCAAGAAAAGAGAGAGAGAGAGAGAGAGCCGAGGAATATTGTATTCCAAAAATTGCGTTGAATTTGTATTAGCTTTTGATGGGGTAGTGAGAGATAGGATGAGGATGTGGTATTCTCAACCTTGAATATTAACAAAAAGAAAGATACGTTCTTGAATTTCGTTTCATTGTGGTTGTTCTGTGTTGGTGTTGGTTTTGGTTTAAATGGATCCTTTATAGGTGTTAGATTCTTCTATCAAGTTCTTTGGTTTTCCTAATCATTTTGATTTCTCAATTCATTTTTACTGCCCAACCCCTAGCTTTCCTTTCAATTTAGGGAATAAAACGTTGGTGTATGTAATGCAATACTCGCACTGCAGAGAAAATGAAGAAACAATTGTTAACCTGGTTTATTGCGTTTATCCCTTTTTTTTGTTTTTATGAGGTGTATTGACCACGAAAATGAAGACAAAACAACCTAGAGTCCAGGGGTAGAGGAAATGCCATCCACAGCTAACTAATACATGAAGGGACAAACTAGGATCTAAAATACTGCATGGTTATGTTATAGAACAACTTTTTGTGCATGGATTTACTAACAAGAGACTGTATGAAGAACAAAATCACTGAAGTTATGCAAGGATTTCTCTGTAGTAAAAGATTGTTTTGTTTCTAACCAAATCAGCCACAAAAAGCTCCAATGGCCAACTTCCAAAGGGCTCTATCTTTTCCATTCAGCCACCAGCCTGAACAAGCTTCGAGGATCCTATTTTCATGCATTTGAGAAAGCAATCCGTAAATTGCATTTATCCCCTCTTTAACTCCCTACTTTTTTTCTGATGTGACTTAGGATATCAACCGATATGGGTAAAAGGGAAGTGGCCTGCCATTTTGGTGTAGGTGTACCCTTTTGTTTCTGTGCAATTGATTTGGCCACTGGTTTTGATAATGGCGAATTCTTTCCCCCAACAGTAATTTTAAGTGTTCAGGTTATACCTTATGGCTCTGCAACAGATGTAGTTGTTAATTGTCATTTATGTTTTGCTGATCCCTTCTCTTTCCATGAATTGTTAGGAACCAAGGTAGCATGGGACGCCTTTGTCCCACAATGGTTAATGGTTAGAATGGGATGACCAATATAGTACTTGAGTGGATTGGTCCTCCACCTCAATAATTGGTTTTTTGGATGTGTTCTCCAAGGTGGTTAAGTACCTAACAGAATCATCTAGTTGTCTGTCCCTAAGCTGTAGGTAGGATTCAGCCCAACCTTAGAAGCCATCCCAGTATAGTGAGTTTCCTATCATTTTCGTTATTTAAGTTTATCCATCTTTTCTAAGATGAGCAAGAGCTCTTAGACACAAATAATGCCTTAACAGGAATAAAACTGGATACTTTATTGAGGGCATATCCTCTTTGAACTGTTCTATCATATGTGTCCTTCTAGGACCCTAAGCATGGTCATTTTTATAGGGAAAACCACTTCTCATATTCATAACCTTTTGTTTCTCTCTAATTATCTTGGCCACATGTCACAGGTCTGCACTCAGCGCTCGTGGAAACGTCCATATGGTGTTGGTCTGCTGGTAGGTGGTCTGGACGAGTCTGGTGCTCATCTTTACTACAACTGCCCGAGTGGCAATTACTTTGAGTATCAAGCTTTTGCCATAGGGTCCCGTTCACAGGCTGCAAAGACATACTTGGAAAGAAGGTTTGAGAACTTCAAGGACTCTTCTAGAGATGAGTTGATCAAAGATGCACTGATCGCTACCAGAGAAACCTTGCAAGGAGAAAAACTGACTTCCTCCATATGCACAATTGCCATTTTAGGACTTGGAGAACCTTTTCATATATTGGATAGGGAAACTGTGCAGAAGTTGATTGATGAGTTTGAGATTGTTAAGGAGGACGACGTTCCTGCTGTGGATCAGGATATCGCCCCAGAGCAGGGCGATTCTGCTGCCCCTGAACCAGCTGCTGGGACAGACCAAGGAAGTGCCTCGGATCAAGGTGTTGCGCCAATGGATATCTAAGGGTACACCGTGCTAGAGGTCGCCTCCCCCTTCCCCACTTCCTGGGTGTTGCTGTTAGGTTTGCTTCTTTAGTGCAGACATTTTGATACTTCTTCTCTATTGTGGCCTCAGATTTCAATTTTACATTTATGAAGGTTGTATCAGACTGTTGAAAATGTGTTATGATGATAACTGATTGTGTTTTTCCATTATATTATATGGGAGAAGAACAGTAAGCTGATCCACAACGGCCCTTGGACATATGGAATCATATCACGTTAGTTTTGATTAAATTTGAGCTACAAATTATATTGCATTTGGTATTAAGGCCAAAATCTGCAAGATGAA CAACACTAGAAAGTGAGGAAACCCATCGCGAAATATTGCCTTGGAGAAGACGAAAACCCCTAAATCCTCCATTAATACGACCTCAATCCTCTCCCTTTTACTCATCGGAGATCCTTATTTTGCCCCTTCATTCCCTTTCTTCTTCACCCAATATGTTTAGGAATCAGTACGATACCGATGTCACCACATGGAGTCCCGCCGGTAGGTTGTTTCAGGTTGAGTACGCCATGGAGGCCGTCAAGCAAGGCTCCGCCGCCATTGGCCTCCGATCCAACACCCATGTGGTTCTAGCCTGCGTTAATAAGGCTAACTCTGAACTATCCTCTCACCAGAAGAAGATCTTCAAAGTCGACGATCACATCGGCGTCGCCATTTCCGGCCTTACTGCTGATGGACGCGTTCTTTCTCGTTATATGAGATCTGAATGTATCAATTACAGCTACACCTATGAATCTCCGCTTCCTGTTGGTCGTCTCGTAGTTCAACTCGCTGATAAGGCTCAGGTCTGCACTCAGCGCTCGTGGAAACGTCCATATGGTGTTGGTCTGCTGGTAGGTGGTCTGGACGAGTCTGGTGCTCATCTTTACTACAACTGCCCGAGTGGCAATTACTTTGAGTATCAAGCTTTTGCCATAGGGTCCCGTTCACAGGCTGCAAAGACATACTTGGAAAGAAGGTTTGAGAACTTCAAGGACTCTTCTAGAGATGAGTTGATCAAAGATGCACTGATCGCTACCAGAGAAACCTTGCAAGGAGAAAAACTGACTTCCTCCATATGCACAATTGCCATTTTAGGACTTGGAGAACCTTTTCATATATTGGATAGGGAAACTGTGCAGAAGTTGATTGATGAGTTTGAGATTGTTAAGGAGGACGACGTTCCTGCTGTGGATCAGGATATCGCCCCAGAGCAGGGCGATTCTGCTGCCCCTGAACCAGCTGCTGGGACAGACCAAGGAAGTGCCTCGGATCAAGGTGTTGCGCCAATGGATATCTAAGGGTACACCGTGCTAGAGGTCGCCTCCCCCTTCCCCACTTCCTGGGTGTTGCTGTTAGGTTTGCTTCTTTAGTGCAGACATTTTGATACTTCTTCTCTATTGTGGCCTCAGATTTCAATTTTACATTTATGAAGGTTGTATCAGACTGTTGAAAATGTGTTATGATGATAACTGATTGTGTTTTTCCATTATATTATATGGGAGAAGAACAGTAAGCTGATCCACAACGGCCCTTGGACATATGGAATCATATCACGTTAGTTTTGATTAAATTTGAGCTACAAATTATATTGCATTTGGTATTAAGGCCAAAATCTGCAAGATGAA ATGTTTAGGAATCAGTACGATACCGATGTCACCACATGGAGTCCCGCCGGTAGGTTGTTTCAGGTTGAGTACGCCATGGAGGCCGTCAAGCAAGGCTCCGCCGCCATTGGCCTCCGATCCAACACCCATGTGGTTCTAGCCTGCGTTAATAAGGCTAACTCTGAACTATCCTCTCACCAGAAGAAGATCTTCAAAGTCGACGATCACATCGGCGTCGCCATTTCCGGCCTTACTGCTGATGGACGCGTTCTTTCTCGTTATATGAGATCTGAATGTATCAATTACAGCTACACCTATGAATCTCCGCTTCCTGTTGGTCGTCTCGTAGTTCAACTCGCTGATAAGGCTCAGGTCTGCACTCAGCGCTCGTGGAAACGTCCATATGGTGTTGGTCTGCTGGTAGGTGGTCTGGACGAGTCTGGTGCTCATCTTTACTACAACTGCCCGAGTGGCAATTACTTTGAGTATCAAGCTTTTGCCATAGGGTCCCGTTCACAGGCTGCAAAGACATACTTGGAAAGAAGGTTTGAGAACTTCAAGGACTCTTCTAGAGATGAGTTGATCAAAGATGCACTGATCGCTACCAGAGAAACCTTGCAAGGAGAAAAACTGACTTCCTCCATATGCACAATTGCCATTTTAGGACTTGGAGAACCTTTTCATATATTGGATAGGGAAACTGTGCAGAAGTTGATTGATGAGTTTGAGATTGTTAAGGAGGACGACGTTCCTGCTGTGGATCAGGATATCGCCCCAGAGCAGGGCGATTCTGCTGCCCCTGAACCAGCTGCTGGGACAGACCAAGGAAGTGCCTCGGATCAAGGTGTTGCGCCAATGGATATCTAA MFRNQYDTDVTTWSPAGRLFQVEYAMEAVKQGSAAIGLRSNTHVVLACVNKANSELSSHQKKIFKVDDHIGVAISGLTADGRVLSRYMRSECINYSYTYESPLPVGRLVVQLADKAQVCTQRSWKRPYGVGLLVGGLDESGAHLYYNCPSGNYFEYQAFAIGSRSQAAKTYLERRFENFKDSSRDELIKDALIATRETLQGEKLTSSICTIAILGLGEPFHILDRETVQKLIDEFEIVKEDDVPAVDQDIAPEQGDSAAPEPAAGTDQGSASDQGVAPMDI Homology
BLAST of PI0020611.1 vs. ExPASy Swiss-Prot
Match: O23712 (Proteasome subunit alpha type-1-B OS=Arabidopsis thaliana OX=3702 GN=PAF2 PE=1 SV=2) HSP 1 Score: 442.2 bits (1136), Expect = 4.4e-123 Identity = 220/281 (78.29%), Postives = 250/281 (88.97%), Query Frame = 0
BLAST of PI0020611.1 vs. ExPASy Swiss-Prot
Match: P34066 (Proteasome subunit alpha type-1-A OS=Arabidopsis thaliana OX=3702 GN=PAF1 PE=1 SV=3) HSP 1 Score: 436.8 bits (1122), Expect = 1.9e-121 Identity = 221/281 (78.65%), Postives = 243/281 (86.48%), Query Frame = 0
BLAST of PI0020611.1 vs. ExPASy Swiss-Prot
Match: P52428 (Proteasome subunit alpha type-1 OS=Oryza sativa subsp. japonica OX=39947 GN=PAF1 PE=2 SV=1) HSP 1 Score: 378.6 bits (971), Expect = 6.0e-104 Identity = 194/286 (67.83%), Postives = 226/286 (79.02%), Query Frame = 0
BLAST of PI0020611.1 vs. ExPASy Swiss-Prot
Match: Q27562 (Proteasome subunit alpha type-1 OS=Dictyostelium discoideum OX=44689 GN=psmA1 PE=3 SV=1) HSP 1 Score: 274.2 bits (700), Expect = 1.6e-72 Identity = 131/238 (55.04%), Postives = 179/238 (75.21%), Query Frame = 0
BLAST of PI0020611.1 vs. ExPASy Swiss-Prot
Match: Q9R1P4 (Proteasome subunit alpha type-1 OS=Mus musculus OX=10090 GN=Psma1 PE=1 SV=1) HSP 1 Score: 261.5 bits (667), Expect = 1.1e-68 Identity = 133/269 (49.44%), Postives = 177/269 (65.80%), Query Frame = 0
BLAST of PI0020611.1 vs. ExPASy TrEMBL
Match: A0A0A0LLH5 (Proteasome subunit alpha type OS=Cucumis sativus OX=3659 GN=Csa_2G361820 PE=3 SV=1) HSP 1 Score: 554.3 bits (1427), Expect = 2.9e-154 Identity = 279/281 (99.29%), Postives = 280/281 (99.64%), Query Frame = 0
BLAST of PI0020611.1 vs. ExPASy TrEMBL
Match: A0A5A7VC66 (Proteasome subunit alpha type OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold82G005560 PE=3 SV=1) HSP 1 Score: 552.7 bits (1423), Expect = 8.5e-154 Identity = 278/281 (98.93%), Postives = 279/281 (99.29%), Query Frame = 0
BLAST of PI0020611.1 vs. ExPASy TrEMBL
Match: A0A1S3BBW8 (Proteasome subunit alpha type OS=Cucumis melo OX=3656 GN=LOC103487987 PE=3 SV=1) HSP 1 Score: 552.7 bits (1423), Expect = 8.5e-154 Identity = 278/281 (98.93%), Postives = 279/281 (99.29%), Query Frame = 0
BLAST of PI0020611.1 vs. ExPASy TrEMBL
Match: A0A6J1HD20 (Proteasome subunit alpha type OS=Cucurbita moschata OX=3662 GN=LOC111462503 PE=3 SV=1) HSP 1 Score: 542.0 bits (1395), Expect = 1.5e-150 Identity = 273/282 (96.81%), Postives = 278/282 (98.58%), Query Frame = 0
BLAST of PI0020611.1 vs. ExPASy TrEMBL
Match: A0A6J1KBQ0 (Proteasome subunit alpha type OS=Cucurbita maxima OX=3661 GN=LOC111491854 PE=3 SV=1) HSP 1 Score: 541.6 bits (1394), Expect = 2.0e-150 Identity = 269/281 (95.73%), Postives = 277/281 (98.58%), Query Frame = 0
BLAST of PI0020611.1 vs. NCBI nr
Match: XP_004152689.1 (proteasome subunit alpha type-1-B [Cucumis sativus] >KGN62618.1 hypothetical protein Csa_022520 [Cucumis sativus]) HSP 1 Score: 554.3 bits (1427), Expect = 6.1e-154 Identity = 279/281 (99.29%), Postives = 280/281 (99.64%), Query Frame = 0
BLAST of PI0020611.1 vs. NCBI nr
Match: XP_008444739.1 (PREDICTED: proteasome subunit alpha type-1-B-like [Cucumis melo] >KAA0065218.1 proteasome subunit alpha type-1-B-like [Cucumis melo var. makuwa]) HSP 1 Score: 552.7 bits (1423), Expect = 1.8e-153 Identity = 278/281 (98.93%), Postives = 279/281 (99.29%), Query Frame = 0
BLAST of PI0020611.1 vs. NCBI nr
Match: XP_023546840.1 (proteasome subunit alpha type-1-B-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 545.0 bits (1403), Expect = 3.7e-151 Identity = 272/281 (96.80%), Postives = 278/281 (98.93%), Query Frame = 0
BLAST of PI0020611.1 vs. NCBI nr
Match: XP_038886220.1 (proteasome subunit alpha type-1-B-like [Benincasa hispida]) HSP 1 Score: 544.3 bits (1401), Expect = 6.3e-151 Identity = 273/281 (97.15%), Postives = 276/281 (98.22%), Query Frame = 0
BLAST of PI0020611.1 vs. NCBI nr
Match: XP_022961863.1 (proteasome subunit alpha type-1-B-like [Cucurbita moschata]) HSP 1 Score: 542.0 bits (1395), Expect = 3.1e-150 Identity = 273/282 (96.81%), Postives = 278/282 (98.58%), Query Frame = 0
BLAST of PI0020611.1 vs. TAIR 10
Match: AT1G47250.1 (20S proteasome alpha subunit F2 ) HSP 1 Score: 442.2 bits (1136), Expect = 3.1e-124 Identity = 220/281 (78.29%), Postives = 250/281 (88.97%), Query Frame = 0
BLAST of PI0020611.1 vs. TAIR 10
Match: AT5G42790.1 (proteasome alpha subunit F1 ) HSP 1 Score: 436.8 bits (1122), Expect = 1.3e-122 Identity = 221/281 (78.65%), Postives = 243/281 (86.48%), Query Frame = 0
BLAST of PI0020611.1 vs. TAIR 10
Match: AT1G53850.1 (20S proteasome alpha subunit E1 ) HSP 1 Score: 152.9 bits (385), Expect = 3.8e-37 Identity = 93/235 (39.57%), Postives = 135/235 (57.45%), Query Frame = 0
BLAST of PI0020611.1 vs. TAIR 10
Match: AT1G53850.2 (20S proteasome alpha subunit E1 ) HSP 1 Score: 152.9 bits (385), Expect = 3.8e-37 Identity = 93/235 (39.57%), Postives = 135/235 (57.45%), Query Frame = 0
BLAST of PI0020611.1 vs. TAIR 10
Match: AT3G14290.1 (20S proteasome alpha subunit E2 ) HSP 1 Score: 151.8 bits (382), Expect = 8.5e-37 Identity = 92/235 (39.15%), Postives = 135/235 (57.45%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
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