PI0020468.1 (mRNA) Melon (PI 482460) v1

Overview


Name	PI0020468.1
Type	mRNA
Organism	Cucumis metuliferus (Melon (PI 482460) v1)
Description	DNA repair protein RadA
Location	chr04: 12988663 .. 12997493 (+)
Sequence length	2220
RNA-Seq Expression	PI0020468.1
Synteny	PI0020468.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CGGACCGCGTGTCTGCTGCAATGAAAATTGGCGGGTGATTATAGCTTAAATCCTTCAGCGTCTTAGTAAAACCCTCAAACTCTCTTTGATGCAGCTCTTAGACATGAAATCCCTCAGAACAGTTTTCTATTCTCGAAAGCACTTTCTCATTTCCTCAACTTTCTCTTCTTATACAACATCCCCATCTCCTCCCGGTCTTGCTTCACCCCTAACTCTTCCCTCTTTCACTACGCCCGCCGTTTCAACACCGCTCAGCTTTCGACCGAGGCCCCGAACGGCGACCCCCTCGCCCGTTCCGGTCCACAAAATGAAAACGGCCTCAATGCTTGGACTATTTACGGCTCCGTTTCGAGTAAGCTTGTTAATCAAAGGGTCGGAAGCAGTAGCGATGGAAAGGAGCACGAACCGAGCATTGGAGTTCAGAATGGAGATGGGGCAGAGGATTTCTCGAATGAGAAGACTTCGGAGAGTGTGAGGAAAGTGGATTTAGAAGATAGGTCGATTTGCAGGCCGTATTTGGGGAAGGTTGTGGGATCGAAGAAGAAGGGTAAAGTTTCTTGGGTTTGTTCGAACTGTGGGTATAGTGACGGGCAGTGGTGGGGAACTTGTCGGTCCTGTCAAATGGTTGGGACAATGAAGCAGTTTTCAGAAGTGAATGATAGTGGAGGAGGGAGTCGAGGGTTTGAAGTTTCAGAAAATGCGGTTCGAACATGGCTTCCAAAGCAGACCACTAACGTGAGTCCTCTGCGGTTAACAGATGTGAACCGGGGGATCAATAATCAGGATTGGAGACTTCCCTTGTAAGTTATATTTTGCAACTTTATGTTCTTCTTTTATCTCTCTTTCGTACGAAAAATGCTTATCAAACTCATTAAAGTAGTTCCAATTAGAGTGAGTCTAAACGCAACGTTCTTTCAATCCATTATTGCTTTTCAACCTCGCGCTTGATGGAGCTCGGGGTAGTGTACTGAACTCTATGGATTATAATTTATAACATTATATGAACATATTGGATATCCGACGGTTTGGGAGGAAATTTTTTTTTTTTTATCCATCTTAGATGGATGTTGATAGTTGGGAAAGTTTATATCTTTTAACCTTGCTTGATGTTTAGGCCTGGTTCCTTCGGAAATGAAGTGGCAAGGGTGCTTGGTGGTGGGCTGGTACCAGGTTAATTCAAACTTCAAGTTTTTTTTTACGTAGCATTGTGATTGTGCTTAATAACTGCCATCTAGTTATTCTTTATTTTACTTGCTTCTATGTACTATTGTCTGATTCCTGTAAGGTGAGGCTGTGATTTCTGTTTTCCATCTGTCTGATGCTCTTGTACCCTAAGTAATCATTAATCAACCGAGGTTAAAACATGTTTTATTTTTGTAAAACTTGTACTTCCTCTCAAGACAGGTAATGGATCTTTATCAAGTTAATTTTTCATCTTGCATAACGATAATTTATCTCATAGTAGGATATGCTAAACTAAACTATATAGTGAACACTAGCCTTTGATTATCATGTATAGTATCTATTGAGACAGTTCTGCTTATATTCATATGAAGTAAATCTCACCTTTATCTATATCATAATTATTTATATAATTCTTCATAATTTTGAGGGTCATAAGGTAAAATGTTACCATTTGTGATTTTGGTTTTTTAATATATCATCCTCAAGATTTCCTTTGAAAAGTTTGTTTCTTTTATGTGTATTAATATCTGCATCTTCCTGGGTTTGAAGGTTGTCTTGTTTTGATCGGTGGTGATCCTGGTGTTGGCAAGAGTACATTGTTGTTGCAGGTATGAAGACATATAGACCCCATTTGATTTGGTAGTTATTTGAAGTTATATTTTATTACTATCTTATTATTTCCAATTTTCTTGGTCATGGTGTCAAATCACACATTTGATTCGAAGATTGCTGCAATTTTAGCTGAAGGGTGTGGCGAAGATAAATCAACATCAATTGTTTATGTCTCTGGGGAAGAGGTAACCTCCTAACAGTCTAAGATGGTTAATTTTCATTGTTCTTTTTTAAAAATTCTCTGAACGATGTCTAGGACTCTTGGCGAGTTCCCTCTAAATTCATGTACCGTTGTCCTTTCGCAGAGTTTGGAGCAAATTGGTAATAGAGCAGACCGATTGAATATTAGAACCGAGAATCTTTTCTTGTACTCAAGTACTAATGTTGAGGTGTGTCATGTACATTTTCTTGCTAGTTTTGTTCTGTTGTTGACTTCTTTCACTCCTGCCAATCTGTTTTTTTTTTTGTTCACTTAGATTATAGTTATGATTCACTGGTCTAGAACTCTAGGTGATAGGTTGATCTACATTGAAGATTTAGTGTATTTGATAAATCATAAAGGATAGGTAGTCTTATCAAAAGTTATGTGCTAATCGATGGAAGATGTGAAATTAATTAATTGTTTAATTATTTCAGGATATATTTGAGAAGATTCAGCCTCTATCTCCTAGAGCCTTGATCATTGATTCTATTCAAACAGTTTATTTGCAAGAAGTATCTGGAAGTGCTGGAGGGCTTTCACAGGTTAGAAACATTATTCTACCTAACAGGTGAATTTTTTTTTATGCTTGTCCACTGCTTCACCATAATCATACAGTGAATTTAGAACTACATGATTCTCTCAAGGCCGAGATCTTAAGAACTCCAATCTTGTCAGGTGAAGGAATGCACCTCAGCCTTTCTCCGTTTTGCAAAGAGAACCGGCATCCCCATTCTATTGGTAAGTAAACCCACACCAATTCCTGTGTATTCTGTTGTTGGATGGAATCAACCGTACAAACTAGACTTGTAGTGTAGTGCTTTTTCTTTTTTTGATATCTGTGAGTGTCCGGGCCAGTTTACACGCACCTCGACTAATCTCACGGGACAACCCGCCTGAATCTACAACATTTGGTAGGTGGCCACCATGGATTGAACCCATGACCTCTTAATTAGTTATTGAGACTATGTCTCTTTTTTTACCACTAGGCCAACCCATGATGGTTGACTTGTAGTGTAGTGCTTGATACAATAAGTCCACTATTGCTTTCTCCAGTACAAATTCCTTTCTTAGCTTTTCAATCCTGAACCTCCAAAATGTTACAAACTATAGCTTTTCTTAAACCGGTAGTTATTGTGAATAAAGTGTCACTTTGCTTTTTGAAAGACTAACCTGTCACCTATTAAACATTCCTTTCAAGTTCTTTCATATGAAGGAAGAATTACAACAGATAATCTATCTCCAAGTTGGGTTGCGAAGAAACTCTAGGTCACCTTTTCATCTCTTTTTTTTTTGTTTTTTTCTTTTTCTTCCCTTTCATTCAATGGCTTTCTGATCCTGACGTTCCCATTTTAACTCTTTTGGCTGGCTTACGGTGCTTATATCATTATTCTCCTCTTCTCCATAGTAGAATTTTTTTCTTGGATTAGAGGGATTGTATTTTTTTGTGGGTTCCTTTTTCCTTTGTGGCCTGTCTTGGTGCAAATTGTTCACTTTAAAGTTCAAACGTTCTTATGACTATTAGGTTTTCTTCTCCTTCTTCTGGTTTATTTTTTTGTTTTTACTGTAGCTTCTTTACCCTGGCTGAAGTTTCCCACCATTTTATATTTCATTTTTCAATGAACGTTTTCTTATAAATTAAAATATTTCTTTTAGTCACTCATCAATTTATCCTTCCTTTCGATGGTGGTAGACATTATGACATGTATGCTTTTTGCTCAAATGCTGTTTTACTAGTTATGGATTTCTCAATTCTCTGATTTTTCCATAAAAAATCGGTGGCTTGGGACCTTCCTATCAAGATGGAAGGTCAGTTTTACTTACTGTCCTTTTGATGAAAGTAATACTCTACCTACTGTTGTACTAGTTTAGAGTGCATATTAGTGTAGCTACCACCTCAATACTCTACCTTTGTTTTTTATTTCCGCATCTGTATCATTTATCCTCTTCCAAAATTGCACTATTTCGGATCTTTTGGTGGGATCTGATAATCCCGTGTCTTTTTCTTTTGGGTTCCGTTGTAATTTGGCCAATAGGGAGACGATGGAAGTGACCTCTCTTCTTTCCTTGCTTGAGGGGTGCTCTTTTAGGGAGGGGAGAAGGGATGTTCTTGTTTGGAACCCTAATCCTAGTCGTGGATACACTTGTAAGTCTTTGTTTAGTCTGTTGTTGGATCCCACTCCCCCTAAGGAGTCAGTTTTTGATGTGGTCTAGAGGACTTAGGTTCCTAAGAAAGTTAGGTTCTTTATTTGGCAGGTCTTGCTTAGTTGGGTTAATACTGTTGATAGGCTTGTTAGGAGGAGAACTTCGCTTGCCAAGCATTTTTGTTGCATGCTTTGTTGGAAGGTGGAGGAAGATCTTGATCATCTCTTTTGGGATTGCCAGTTTGCGTGGGCTATGTGGAGGACTTTCCTTCGAGAGTTCAATGTTAACTTTTCTGGTTTACGAAGTGTCAGAGCAACGATCAAGGAGTTCCTCCTCCATCCGCCCTTCAAAGAAAGGGGTTTTTTTATCACTTGTCTGGGTGTGCGCTGTTATTTGGGACATTTGGGGTGAGAGTAATAATCGGGTTTTTCGGGGTAGGGAGAGGAGGCATAGTGAAATTTGATCTTTGGTTAGATTTCATGTGCCCCTTTGGGCTTCGATTTCGAAGAATTTCTGTAACTACTCTACAGACAACATTTTACTTAGTTGGTCCCCCTTGTATTCTTTCATTCTTTCTCAATGAAATGTATTGTTTTCATAAAAAAATGAGTGATTTTGAAATGGCTAAAATCACTTATCATGTTTAAAATCACTCGGAAATACTTCTTTAATCACTCAAATCAATTCAATGTTGAATTTTACATTCTTAAACACAGTTTCTATATTGATATGGATTTTTGAATAATCAAAAGCCTTTTTTTGAGTGATTTTGGCCATTTAAAAATTGCTCCCAAAGTTCATTTCTCTCTAAAGAATCTCGTATATACACATTTAGGTTATTGTATTTCTACATGTATTTTGGAAGTAATCTTTTTTTTTATACATGTGGACCTATGTATGCATAGGTATGTGTTTGGAAGTAATATACACATCCTCATGTGTTGAAATATTTCAGATTGGACATGTGACCAAATCAGGAGAAATTTCTGGACCTCGACTTCTGGAGCACATTGTGGATGTTGTACTGTATATGGAAGTGGGTACATGTACATCCCTTACATTTACTTCTATTTTCCTTTCTTTTTAGCCGTGCATTTCAGACATATTATCATCAGCTTTGTCAGAACTTATTAGCTATTGTGGGATGAGATCAGATGACTGATAATTACTGACTCGTGCCTTTGGGCCTTGATTTTCAATAATCTACCATTGTACACCAATCTTTTCTAGTTAATCTCTTTCCATATATATCTTCTTCCAGTACTTCAATAAGTAATTTATTTTTAGGCACACTTTCTCATCTCTCACTAATTTCGTCTTTCCATGCATGTATATTTTCTTTCTAATCTGTATCCTTTTATGTAGTGCATTTGTTAAGTTTATAAATATTAATGCCACTTTACTGTTTCCGTCTAGAAATATATACCTGTAACTAGATCAACAACCCCTTTGAAATATTGGAATCAAGTAGTTAGCTATTTATTTTTAAAAAAGGAGTAAAGTATTTAATTGCTAATTTCACAGTTTTGATATAAGCACTTCCAGTTCCTGACCTTTAATTTGATTTAATGTGTTCATATGACTACAGCCTACAGTACTTGGGTAGTGTAAATAATTTCACATGTTCTTGAGTTGGTCCTATTATACTATTTACTTTTATAAAGTATTTAAAAATGATTTGTGTGAAAGGAAAAAAGAATGAAATGATGTGTGGAATAGGGGGAGAAATGCTCGTTGCATCGGCTACTACGACCAGTGAAGAACCGATTTGGATCAACAGATGAGCTTGGAGTATTTGAAATGTTGCCATCAGGACTGGAAGTGGTGTCGAATCCGAGTGAGATGTTTAGAAGGGATGACTATGCAAATACAAACTCGGAGTATTTGGCAGGACTTGCTGTTGCAGTGATCATGGATGGAAATCAAACCTTCCTGCTTGAAATTCAGGTACTTTGCTCCAACCCCTCTCTTAAAAAAAGACCACATTCGAATGTTTTCTTACTAAAAGTATTTATCAAGTTATAATTACTTGTTTAAAAAGAAAAGTTACCATTACATATCGGTCTCTAGGCTAAAAAAAGATGTTTATAGGTCCCTAAATTTCAAAATTTTTTTTTGATAGATCTTGAACCTTGAACATTTAATTTTGTGTCTATGAAATTTTGTTATATTTCATATATTTTTAAATTTACGATCCCGATAGGCACAAAATTCAAGTGGCCTATTCAATAAATTGAAACTTGAAGTTTAGAGGCCTTAAAGAATCTATCAAATACAAAGTTAAAGGTCATAAAACTTGTAGTTTAGCCACAATATTTTAGTTTTATAAGCACGTTATTTTATTATATCTTTTACTTCTCATTTTTTGAAAAAAAAACCTCATATTTATTATTTAATTATATTAGAACAACTTTTGAACATTGTGAAATCCTCTCCATCTCAAAAATTTATTGGATTATCCCAGACTATCCTCATGGTTAGAAATTTTGTTTTTTTTTTTTCCAGAAAGGTTAATTCTCTTTTATTTGTTTGAGAATTTATGCGATTGTGCTTTCTGTGTTGTGAAAATTTTGAATTACAAACTTCTCCAAATAAATATTTTCATCTTTGGATGGCTTAATCTGCCTTATAAATTTTCTTATTGTTTAGTCTTATTTGATAATATTCTCGTTTTTATTAATTAACCTTATAAGAGCTACTTATTTCTTGTTAAAAATTTGGATGGCTAACATTTATAATAACTTTTGTTAATTAAAAAGAAAAAAAAAAAAAAAAAAAGAGAACTGTTAGCATATTTTTAAGGTGGAAAATAAGTAGTAGTAACCCTTTGATTGATCGACTTCAGATCAACAATATCATTCTTGTTGCTAATAACTCAATCATTCTCATTTTGATCATTTGTTACCTGAATTTTCTAGGCATTGTGTTTGTCCAAATCCTCTCTTGATAGACACGTTAATGGGATTCAACCCAGCAGGGCTGATATGATCATATCGGTATGTTGTTAAGTGAATTATTTCTGGTAAACTCTGACATCTTGAGTGACAACTTTTTGTTCTTTCTCAAGGCATTCGACAAACTTTCTCAGACTAATTGTTGTTTATCCTAGTCTATAATTTCCTCAGGGACATGCAGTTGAGAAATACGGCCTTCATTTGCTGAGGCATAACTTTTATGCATCCAGATAACAATGACGTTTACTCGAATAAAAAAATGATAGATCTCATTTTGATGAACAATTTACGAGTACCAATATCAATTTTATTGAACTTGAACTTTAGGGCTTCTGAAATTTAGCTGTCTGTCACTTTTGTTGCTTGTTTGATTATTTCATGCTTAATTTCTTATCCTTCCTCCTTTATCATTCCTGGTTTAATATGAATGTTTGTTTCTACTTTTCATTATTTTGAACTTTCTTCATGTGCCAACTTGAGCATTGCTTGGTGGTTGCAATGCTATATACTAGGGAAAAAGAGAGAAGAAAGAAATCTTTATTATTTATGATGTTAATTGTGAAATTAGTGAACTATTTATTGATTAGTTTTTAAGTTCATCTTATGAATGGTAGGTTAATTGTGAAATCTTTACCATTTATGATGTTAATTGTGAAATTAGTGAACTATTTATTGATTAGTTTTAAAGTTCATCTTATGAATGGTAGGTTCTCATGAAGCAAGTTGGGTTGAAGCTACAAGAATGTGTGAGTTGACAGCATCTAAAAATTTTATTACTCTGCTTTAGTGGAGTTGATGTTAATCTTCCCTGATTGATTAGTCAAAGTCGATGGATCTGCTCAATTATTGTCCTATAATAAACAGCAGTTATATTTCTTTCATACCTTCTAATAGTCTGTATATGTCTTGCTTTATGCTTTATTTGTTTTGTACTTTGAAATTACAGAAAATATTTATAAATGTTGTGAGCGGGGCATCATTGACAGAGACTGCAGGAGATCTTGCAACTGCAATGGCAATTTGCAGCAGGCATGTGATTTCAACTAATTGCACTTAACTGATAATCATGCCTTTTACAAGTAACCTTTTGGTTTCTCTCCCTCTCTCTAACGTTTAATTTATTTGTTGTCACTTCAGCTTTTTGGAGTTTCCCATTCCAAATGACATTGCATTCATTGGTGAAATTGGCCTCGGCGGCGAGCTTCGCATGGTAAGCATTCTATTTCAGCGCTATTACAAAAGTTTTGGCATGCCTTGTACAGATCATCTAGTTTTTAGTCTACCATAAGGGCCATTTTCAAATTTGTTTAATAAAATATCAAAACTTCATTAACGTTCAGGTGGGTAGGATGGACAGGAGGATTAATACTGTGGCCAAATTGGGTTTCAAAAGATGTATAGTACCCAAGTCAGCTGAAAATTGTTTAGGAGTGGTAAGGTTGGGCGAGATGAAGCTCATAGGTTGCAGAATTTTGAAAGATGTTATCAACAACGTGTTCATGGCAAACAATGATGAAGTTATGAATCATTAATCTTTTGCTGGGTAGTTTTAAATTTTGTTCATTTGTGGTATAAAGATACAACTTCCAAAATGAAGTGGATGTACATAAAATCTACCCTTTCGAGTCATTCAAACAAGAAAAGTTGATTAGGCAAGGCAAGTTATTTACTTGATGAAAATTTATGACAGTTTTTATATTGGCATGAATTAATCGCATCAATAGTAATTTCACCCC

mRNA sequence

CGGACCGCGTGTCTGCTGCAATGAAAATTGGCGGGTGATTATAGCTTAAATCCTTCAGCGTCTTAGTAAAACCCTCAAACTCTCTTTGATGCAGCTCTTAGACATGAAATCCCTCAGAACAGTTTTCTATTCTCGAAAGCACTTTCTCATTTCCTCAACTTTCTCTTCTTATACAACATCCCCATCTCCTCCCGGTCTTGCTTCACCCCTAACTCTTCCCTCTTTCACTACGCCCGCCGTTTCAACACCGCTCAGCTTTCGACCGAGGCCCCGAACGGCGACCCCCTCGCCCGTTCCGGTCCACAAAATGAAAACGGCCTCAATGCTTGGACTATTTACGGCTCCGTTTCGAGTAAGCTTGTTAATCAAAGGGTCGGAAGCAGTAGCGATGGAAAGGAGCACGAACCGAGCATTGGAGTTCAGAATGGAGATGGGGCAGAGGATTTCTCGAATGAGAAGACTTCGGAGAGTGTGAGGAAAGTGGATTTAGAAGATAGGTCGATTTGCAGGCCGTATTTGGGGAAGGTTGTGGGATCGAAGAAGAAGGGTAAAGTTTCTTGGGTTTGTTCGAACTGTGGGTATAGTGACGGGCAGTGGTGGGGAACTTGTCGGTCCTGTCAAATGGTTGGGACAATGAAGCAGTTTTCAGAAGTGAATGATAGTGGAGGAGGGAGTCGAGGGTTTGAAGTTTCAGAAAATGCGGTTCGAACATGGCTTCCAAAGCAGACCACTAACGTGAGTCCTCTGCGGTTAACAGATGTGAACCGGGGGATCAATAATCAGGATTGGAGACTTCCCTTGCCTGGTTCCTTCGGAAATGAAGTGGCAAGGGTGCTTGGTGGTGGGCTGGTACCAGGTTGTCTTGTTTTGATCGGTGGTGATCCTGGTGTTGGCAAGAGTACATTGTTGTTGCAGATTGCTGCAATTTTAGCTGAAGGGTGTGGCGAAGATAAATCAACATCAATTGTTTATGTCTCTGGGGAAGAGAGTTTGGAGCAAATTGGTAATAGAGCAGACCGATTGAATATTAGAACCGAGAATCTTTTCTTGTACTCAAGTACTAATGTTGAGGATATATTTGAGAAGATTCAGCCTCTATCTCCTAGAGCCTTGATCATTGATTCTATTCAAACAGTTTATTTGCAAGAAGTATCTGGAAGTGCTGGAGGGCTTTCACAGGTGAAGGAATGCACCTCAGCCTTTCTCCGTTTTGCAAAGAGAACCGGCATCCCCATTCTATTGATTGGACATGTGACCAAATCAGGAGAAATTTCTGGACCTCGACTTCTGGAGCACATTGTGGATGTTGTACTGTATATGGAAGGGGAGAAATGCTCGTTGCATCGGCTACTACGACCAGTGAAGAACCGATTTGGATCAACAGATGAGCTTGGAGTATTTGAAATGTTGCCATCAGGACTGGAAGTGGTGTCGAATCCGAGTGAGATGTTTAGAAGGGATGACTATGCAAATACAAACTCGGAGTATTTGGCAGGACTTGCTGTTGCAGTGATCATGGATGGAAATCAAACCTTCCTGCTTGAAATTCAGGCATTGTGTTTGTCCAAATCCTCTCTTGATAGACACGTTAATGGGATTCAACCCAGCAGGGCTGATATGATCATATCGGTTCTCATGAAGCAAGTTGGGTTGAAGCTACAAGAATGTAAAATATTTATAAATGTTGTGAGCGGGGCATCATTGACAGAGACTGCAGGAGATCTTGCAACTGCAATGGCAATTTGCAGCAGCTTTTTGGAGTTTCCCATTCCAAATGACATTGCATTCATTGGTGAAATTGGCCTCGGCGGCGAGCTTCGCATGGTGGGTAGGATGGACAGGAGGATTAATACTGTGGCCAAATTGGGTTTCAAAAGATGTATAGTACCCAAGTCAGCTGAAAATTGTTTAGGAGTGGTAAGGTTGGGCGAGATGAAGCTCATAGGTTGCAGAATTTTGAAAGATGTTATCAACAACGTGTTCATGGCAAACAATGATGAAGTTATGAATCATTAATCTTTTGCTGGGTAGTTTTAAATTTTGTTCATTTGTGGTATAAAGATACAACTTCCAAAATGAAGTGGATGTACATAAAATCTACCCTTTCGAGTCATTCAAACAAGAAAAGTTGATTAGGCAAGGCAAGTTATTTACTTGATGAAAATTTATGACAGTTTTTATATTGGCATGAATTAATCGCATCAATAGTAATTTCACCCC

Coding sequence (CDS)

ATGGTTGGGACAATGAAGCAGTTTTCAGAAGTGAATGATAGTGGAGGAGGGAGTCGAGGGTTTGAAGTTTCAGAAAATGCGGTTCGAACATGGCTTCCAAAGCAGACCACTAACGTGAGTCCTCTGCGGTTAACAGATGTGAACCGGGGGATCAATAATCAGGATTGGAGACTTCCCTTGCCTGGTTCCTTCGGAAATGAAGTGGCAAGGGTGCTTGGTGGTGGGCTGGTACCAGGTTGTCTTGTTTTGATCGGTGGTGATCCTGGTGTTGGCAAGAGTACATTGTTGTTGCAGATTGCTGCAATTTTAGCTGAAGGGTGTGGCGAAGATAAATCAACATCAATTGTTTATGTCTCTGGGGAAGAGAGTTTGGAGCAAATTGGTAATAGAGCAGACCGATTGAATATTAGAACCGAGAATCTTTTCTTGTACTCAAGTACTAATGTTGAGGATATATTTGAGAAGATTCAGCCTCTATCTCCTAGAGCCTTGATCATTGATTCTATTCAAACAGTTTATTTGCAAGAAGTATCTGGAAGTGCTGGAGGGCTTTCACAGGTGAAGGAATGCACCTCAGCCTTTCTCCGTTTTGCAAAGAGAACCGGCATCCCCATTCTATTGATTGGACATGTGACCAAATCAGGAGAAATTTCTGGACCTCGACTTCTGGAGCACATTGTGGATGTTGTACTGTATATGGAAGGGGAGAAATGCTCGTTGCATCGGCTACTACGACCAGTGAAGAACCGATTTGGATCAACAGATGAGCTTGGAGTATTTGAAATGTTGCCATCAGGACTGGAAGTGGTGTCGAATCCGAGTGAGATGTTTAGAAGGGATGACTATGCAAATACAAACTCGGAGTATTTGGCAGGACTTGCTGTTGCAGTGATCATGGATGGAAATCAAACCTTCCTGCTTGAAATTCAGGCATTGTGTTTGTCCAAATCCTCTCTTGATAGACACGTTAATGGGATTCAACCCAGCAGGGCTGATATGATCATATCGGTTCTCATGAAGCAAGTTGGGTTGAAGCTACAAGAATGTAAAATATTTATAAATGTTGTGAGCGGGGCATCATTGACAGAGACTGCAGGAGATCTTGCAACTGCAATGGCAATTTGCAGCAGCTTTTTGGAGTTTCCCATTCCAAATGACATTGCATTCATTGGTGAAATTGGCCTCGGCGGCGAGCTTCGCATGGTGGGTAGGATGGACAGGAGGATTAATACTGTGGCCAAATTGGGTTTCAAAAGATGTATAGTACCCAAGTCAGCTGAAAATTGTTTAGGAGTGGTAAGGTTGGGCGAGATGAAGCTCATAGGTTGCAGAATTTTGAAAGATGTTATCAACAACGTGTTCATGGCAAACAATGATGAAGTTATGAATCATTAA

Protein sequence

MVGTMKQFSEVNDSGGGSRGFEVSENAVRTWLPKQTTNVSPLRLTDVNRGINNQDWRLPLPGSFGNEVARVLGGGLVPGCLVLIGGDPGVGKSTLLLQIAAILAEGCGEDKSTSIVYVSGEESLEQIGNRADRLNIRTENLFLYSSTNVEDIFEKIQPLSPRALIIDSIQTVYLQEVSGSAGGLSQVKECTSAFLRFAKRTGIPILLIGHVTKSGEISGPRLLEHIVDVVLYMEGEKCSLHRLLRPVKNRFGSTDELGVFEMLPSGLEVVSNPSEMFRRDDYANTNSEYLAGLAVAVIMDGNQTFLLEIQALCLSKSSLDRHVNGIQPSRADMIISVLMKQVGLKLQECKIFINVVSGASLTETAGDLATAMAICSSFLEFPIPNDIAFIGEIGLGGELRMVGRMDRRINTVAKLGFKRCIVPKSAENCLGVVRLGEMKLIGCRILKDVINNVFMANNDEVMNH

Homology

[Close]

BLAST of PI0020468.1 vs. ExPASy Swiss-Prot
Match: Q9KGG1 (DNA repair protein RadA OS=Bacillus halodurans (strain ATCC BAA-125 / DSM 18197 / FERM 7344 / JCM 9153 / C-125) OX=272558 GN=radA PE=3 SV=1)

HSP 1 Score: 335.5 bits (859), Expect = 9.6e-91
Identity = 192/433 (44.34%), Postives = 282/433 (65.13%), Query Frame = 0


Query: 22  EVSENAVRTWLPKQTTNVSPLRLTDVNRGINNQDWRLPLPGSFGNEVARVLGGGLVPGCL 81
           EV   + R+++        P  +T V R    Q+ R+    +   E+ RVLGGG+VPG L
Sbjct: 39  EVKAKSSRSYVTSGAGIAKPQPITKVER---EQEPRI---DTSMKELNRVLGGGIVPGSL 98

Query: 82  VLIGGDPGVGKSTLLLQIAAILAEGCGEDKSTSIVYVSGEESLEQIGNRADRLNIRTENL 141
           VL+GGDPG+GKSTLLLQ++A LA     D    ++Y+SGEES++Q   R+DRL + +++L
Sbjct: 99  VLVGGDPGIGKSTLLLQLSARLA-----DLKQRVLYISGEESVKQTKIRSDRLGVLSDHL 158

Query: 142 FLYSSTNVEDIFEKIQPLSPRALIIDSIQTVYLQEVSGSAGGLSQVKECTSAFLRFAKRT 201
           ++ + T++E I + I  + P  +IIDSIQTVY  E++ + G ++QV+ECT++F+R AK T
Sbjct: 159 YVLAETDMEKIEQAIGEVDPTLVIIDSIQTVYQDEITSAPGSVAQVRECTASFMRIAKTT 218

Query: 202 GIPILLIGHVTKSGEISGPRLLEHIVDVVLYMEGEKCSLHRLLRPVKNRFGSTDELGVFE 261
           G+ I ++GHVTK G I+GP+LLEH+VD VLY EGE+   +R+LR VKNRFGST+E+G+FE
Sbjct: 219 GVAIFIVGHVTKQGAIAGPKLLEHMVDSVLYFEGERHHTYRILRAVKNRFGSTNEMGIFE 278

Query: 262 MLPSGLEVVSNPSEMFRRDDYANTNSEYLAGLAVAVIMDGNQTFLLEIQALCLSKSSLD- 321
           M  SGLE V+NPSE+F  D      S  +AG  V   M+G +  L+E+QAL +S +S   
Sbjct: 279 MKESGLEEVANPSEIFLED-----RSSGVAGSTVVASMEGTRPVLVELQAL-ISPTSFGN 338

Query: 322 --RHVNGIQPSRADMIISVLMKQVGLKLQECKIFINVVSGASLTETAGDLATAMAICSSF 381
             R   G+  +R  ++++VL K+VG+ LQ    ++NV  G  L E A DL  A++I SSF
Sbjct: 339 PRRMATGVDHNRISLLMAVLEKRVGMLLQNQDAYVNVAGGVRLDEPAIDLGIAVSIASSF 398

Query: 382 L-EFPIPNDIAFIGEIGLGGELRMVGRMDRRINTVAKLGFKRCIVPKSAENCLGVVRLGE 441
             +   P+++  IGEIGL GE+R V R+D+R+N  AKLGFKR I+P   +N  G      
Sbjct: 399 RNQHTNPHEVV-IGEIGLTGEVRRVSRIDQRVNEAAKLGFKRVIIPD--KNLGGWTIPST 451

Query: 442 MKLIGCRILKDVI 451
           +++IG   ++D +
Sbjct: 459 IEVIGVSTVQDAL 451

[Close]

BLAST of PI0020468.1 vs. ExPASy Swiss-Prot
Match: Q92F42 (DNA repair protein RadA OS=Listeria innocua serovar 6a (strain ATCC BAA-680 / CLIP 11262) OX=272626 GN=radA PE=3 SV=1)

HSP 1 Score: 325.9 bits (834), Expect = 7.6e-88
Identity = 174/386 (45.08%), Postives = 254/386 (65.80%), Query Frame = 0


Query: 67  EVARVLGGGLVPGCLVLIGGDPGVGKSTLLLQIAAILAEGCGEDKSTSIVYVSGEESLEQ 126
           E+ RVLGGG+VPG +VL+GGDPG+GKSTLLLQ++A L        +  ++Y+SGEES++Q
Sbjct: 78  ELNRVLGGGVVPGSMVLVGGDPGIGKSTLLLQVSAQLTL-----TNKKVLYISGEESIKQ 137

Query: 127 IGNRADRLNIRTENLFLYSSTNVEDIFEKIQPLSPRALIIDSIQTVYLQEVSGSAGGLSQ 186
              RA+RL +  +NL++Y+ TN+E + E I  + P  ++IDSIQTVY  +V+ +AG +SQ
Sbjct: 138 TKLRAERLQVSGDNLYVYAETNLEAVQETIDFVKPDFVVIDSIQTVYHPDVTSAAGSVSQ 197

Query: 187 VKECTSAFLRFAKRTGIPILLIGHVTKSGEISGPRLLEHIVDVVLYMEGEKCSLHRLLRP 246
           V+ECT+A +R AK   I I ++GHVTK G I+GPRLLEH+VD VLY EGE+   +R+LR 
Sbjct: 198 VRECTAALMRIAKMQNIAIFIVGHVTKEGAIAGPRLLEHMVDTVLYFEGERHHAYRILRA 257

Query: 247 VKNRFGSTDELGVFEMLPSGLEVVSNPSEMFRRDDYANTNSEYLAGLAVAVIMDGNQTFL 306
           VKNRFGST+E+G+FEM   GL  V+NPSE+F  +       E  +G  V   M+G +  L
Sbjct: 258 VKNRFGSTNEMGIFEMRDIGLVEVANPSEVFLEE-----RLEGASGSTVVASMEGTRPVL 317

Query: 307 LEIQALCLSK--SSLDRHVNGIQPSRADMIISVLMKQVGLKLQECKIFINVVSGASLTET 366
           +EIQAL       +  R   GI  ++  +I++VL K+VGL LQ    ++    G  L E 
Sbjct: 318 VEIQALVSPTMFGNAKRMATGIDYNKVSLIMAVLEKRVGLMLQNQDAYLKAAGGVKLDEP 377

Query: 367 AGDLATAMAICSSFLEFPIPNDIAFIGEIGLGGELRMVGRMDRRINTVAKLGFKRCIVPK 426
           A DLA A+++ SS+ + P  +   FIGE+GL GE+R V R+++R+   AKLGFKR  +PK
Sbjct: 378 AVDLAVAVSVASSYRDKPTRSTDCFIGELGLTGEIRRVARIEQRVQEAAKLGFKRIFIPK 437

Query: 427 SAENCLGVVRLGEMKLIGCRILKDVI 451
           + E    V +  +++++G   + + +
Sbjct: 438 NNEGTWKVPK--DVQVVGVETIGEAL 451

[Close]

BLAST of PI0020468.1 vs. ExPASy Swiss-Prot
Match: P37572 (DNA repair protein RadA OS=Bacillus subtilis (strain 168) OX=224308 GN=radA PE=1 SV=1)

HSP 1 Score: 324.7 bits (831), Expect = 1.7e-87
Identity = 181/379 (47.76%), Postives = 250/379 (65.96%), Query Frame = 0


Query: 67  EVARVLGGGLVPGCLVLIGGDPGVGKSTLLLQIAAILAEGCGEDKSTSIVYVSGEESLEQ 126
           E  RVLGGG+V G LVLIGGDPG+GKSTLLLQ++A L+       S S++Y+SGEES++Q
Sbjct: 79  EFNRVLGGGVVKGSLVLIGGDPGIGKSTLLLQVSAQLS-----GSSNSVLYISGEESVKQ 138

Query: 127 IGNRADRLNIRTENLFLYSSTNVEDIFEKIQPLSPRALIIDSIQTVYLQEVSGSAGGLSQ 186
              RADRL I   +L + S T++E I   IQ ++P  +++DSIQTVY  +++ + G +SQ
Sbjct: 139 TKLRADRLGINNPSLHVLSETDMEYISSAIQEMNPSFVVVDSIQTVYQSDITSAPGSVSQ 198

Query: 187 VKECTSAFLRFAKRTGIPILLIGHVTKSGEISGPRLLEHIVDVVLYMEGEKCSLHRLLRP 246
           V+ECT+  ++ AK  GIPI ++GHVTK G I+GPRLLEH+VD VLY EGE+    R+LR 
Sbjct: 199 VRECTAELMKIAKTKGIPIFIVGHVTKEGSIAGPRLLEHMVDTVLYFEGERHHTFRILRA 258

Query: 247 VKNRFGSTDELGVFEMLPSGLEVVSNPSEMFRRDDYANTNSEYLAGLAVAVIMDGNQTFL 306
           VKNRFGST+E+G+FEM   GL  V NPSE+F  +  A +     AG ++   M+G +  L
Sbjct: 259 VKNRFGSTNEMGIFEMREEGLTEVLNPSEIFLEERSAGS-----AGSSITASMEGTRPIL 318

Query: 307 LEIQALCLSKSSLD---RHVNGIQPSRADMIISVLMKQVGLKLQECKIFINVVSGASLTE 366
           +EIQAL +S +S     R   GI  +R  ++++VL K+VGL LQ    ++ V  G  L E
Sbjct: 319 VEIQAL-ISPTSFGNPRRMATGIDHNRVSLLMAVLEKRVGLLLQNQDAYLKVAGGVKLDE 378

Query: 367 TAGDLATAMAICSSFLEFPIPNDIAFIGEIGLGGELRMVGRMDRRINTVAKLGFKRCIVP 426
            A DLA  ++I SSF + P      FIGE+GL GE+R V R+++R+   AKLGFKR I+P
Sbjct: 379 PAIDLAIVISIASSFRDTPPNPADCFIGEVGLTGEVRRVSRIEQRVKEAAKLGFKRMIIP 438

Query: 427 KSAENCLGVVRLGEMKLIG 443
             A N  G  +   +++IG
Sbjct: 439 --AANLDGWTKPKGIEVIG 444

[Close]

BLAST of PI0020468.1 vs. ExPASy Swiss-Prot
Match: Q48761 (DNA repair protein RadA OS=Listeria monocytogenes serovar 1/2a (strain ATCC BAA-679 / EGD-e) OX=169963 GN=radA PE=3 SV=2)

HSP 1 Score: 324.3 bits (830), Expect = 2.2e-87
Identity = 171/363 (47.11%), Postives = 242/363 (66.67%), Query Frame = 0


Query: 67  EVARVLGGGLVPGCLVLIGGDPGVGKSTLLLQIAAILAEGCGEDKSTSIVYVSGEESLEQ 126
           E+ RVLGGG+VPG +VL+GGDPG+GKSTLLLQ++A L        +  ++Y+SGEES++Q
Sbjct: 78  ELNRVLGGGVVPGSMVLVGGDPGIGKSTLLLQVSAQLTL-----TNKKVLYISGEESIKQ 137

Query: 127 IGNRADRLNIRTENLFLYSSTNVEDIFEKIQPLSPRALIIDSIQTVYLQEVSGSAGGLSQ 186
              RA+RL +  +NL++Y+ TN+E + E I  + P  ++IDSIQTVY  +V+ +AG +SQ
Sbjct: 138 TKLRAERLQVSGDNLYVYAETNLEAVQETIDFVKPDFVVIDSIQTVYHSDVTSAAGSVSQ 197

Query: 187 VKECTSAFLRFAKRTGIPILLIGHVTKSGEISGPRLLEHIVDVVLYMEGEKCSLHRLLRP 246
           V+ECT+  +R AK   I I ++GHVTK G I+GPRLLEH+VD VLY EGE+   +R+LR 
Sbjct: 198 VRECTATLMRIAKMQNIAIFIVGHVTKEGAIAGPRLLEHMVDTVLYFEGERHHAYRILRA 257

Query: 247 VKNRFGSTDELGVFEMLPSGLEVVSNPSEMFRRDDYANTNSEYLAGLAVAVIMDGNQTFL 306
           VKNRFGST+E+G+FEM   GL  V+NPSE+F  +       E  +G  V   M+G +  L
Sbjct: 258 VKNRFGSTNEMGIFEMRDVGLVEVANPSEVFLEE-----RLEGASGSTVVASMEGTRPVL 317

Query: 307 LEIQALCLSK--SSLDRHVNGIQPSRADMIISVLMKQVGLKLQECKIFINVVSGASLTET 366
           +EIQAL       +  R   GI  ++  +I++VL K+VGL LQ    ++    G  L E 
Sbjct: 318 VEIQALVSPTMFGNAKRMATGIDYNKVSLIMAVLEKRVGLMLQNQDAYLKAAGGVKLDEP 377

Query: 367 AGDLATAMAICSSFLEFPIPNDIAFIGEIGLGGELRMVGRMDRRINTVAKLGFKRCIVPK 426
           A DLA A+++ SS+ + P  +   FIGE+GL GE+R V R+++R+   AKLGFKR  +PK
Sbjct: 378 AVDLAVAVSVASSYRDKPTRSTDCFIGELGLTGEIRRVARIEQRVQEAAKLGFKRIFIPK 430

Query: 427 SAE 428
           + E
Sbjct: 438 NNE 430

[Close]

BLAST of PI0020468.1 vs. ExPASy Swiss-Prot
Match: Q8DRP0 (DNA repair protein RadA OS=Streptococcus pneumoniae (strain ATCC BAA-255 / R6) OX=171101 GN=radA PE=1 SV=1)

HSP 1 Score: 313.9 bits (803), Expect = 3.0e-84
Identity = 172/390 (44.10%), Postives = 248/390 (63.59%), Query Frame = 0


Query: 67  EVARVLGGGLVPGCLVLIGGDPGVGKSTLLLQIAAILAEGCGEDKSTSIVYVSGEESLEQ 126
           E  RVLGGG+VPG LVLIGGDPG+GKSTLLLQ++  L++        +++YVSGEES +Q
Sbjct: 43  EFNRVLGGGVVPGSLVLIGGDPGIGKSTLLLQVSTQLSQ------VGTVLYVSGEESAQQ 102

Query: 127 IGNRADRLNIRTENLFLYSSTNVEDIFEKIQPLSPRALIIDSIQTVYLQEVSGSAGGLSQ 186
           I  RA+RL       +LY+ TN++ +  +++ + P  LIIDSIQT+   E+SG  G +SQ
Sbjct: 103 IKLRAERLGDIDSEFYLYAETNMQSVRAEVERIQPDFLIIDSIQTIMSPEISGVQGSVSQ 162

Query: 187 VKECTSAFLRFAKRTGIPILLIGHVTKSGEISGPRLLEHIVDVVLYMEGEKCSLHRLLRP 246
           V+E T+  ++ AK   I I ++GHVTK G ++GPR+LEH+VD VLY EGE+    R+LR 
Sbjct: 163 VREVTAELMQLAKTNNIAIFIVGHVTKEGTLAGPRMLEHMVDTVLYFEGERHHTFRILRA 222

Query: 247 VKNRFGSTDELGVFEMLPSGLEVVSNPSEMFRRDDYANTNSEYLAGLAVAVIMDGNQTFL 306
           VKNRFGST+E+G+FEM   GL  V NPS++F  +       +   G ++ V M+G +  L
Sbjct: 223 VKNRFGSTNEIGIFEMQSGGLVEVLNPSQVFLEE-----RLDGATGSSIVVTMEGTRPIL 282

Query: 307 LEIQALCLSK--SSLDRHVNGIQPSRADMIISVLMKQVGLKLQECKIFINVVSGASLTET 366
            E+QAL       +  R   G+  +RA +I++VL K+ GL LQ    ++    G  L E 
Sbjct: 283 AEVQALVTPTMFGNAKRTTTGLDFNRASLIMAVLEKRAGLLLQNQDAYLKSAGGVKLDEP 342

Query: 367 AGDLATAMAICSSFLEFPIPNDIAFIGEIGLGGELRMVGRMDRRINTVAKLGFKRCIVPK 426
           A DLA A+AI SS+ + P      F+GE+GL GE+R V R+++RIN  AKLGF +  VPK
Sbjct: 343 AIDLAVAVAIASSYKDKPTNPQECFVGELGLTGEIRRVNRIEQRINEAAKLGFTKIYVPK 402

Query: 427 SAENCLGVVRLGEMKLIGCRILKDVINNVF 455
           +  +  G+    E+++IG   +++V+  VF
Sbjct: 403 N--SLTGITLPKEIQVIGVTTIQEVLKKVF 419

[Close]

BLAST of PI0020468.1 vs. ExPASy TrEMBL
Match: A0A6J1ITP4 (uncharacterized protein LOC111479856 OS=Cucurbita maxima OX=3661 GN=LOC111479856 PE=4 SV=1)

HSP 1 Score: 782.3 bits (2019), Expect = 1.1e-222
Identity = 393/458 (85.81%), Postives = 424/458 (92.58%), Query Frame = 0


Query: 1   MVGTMKQFSEVNDSGGGSRGFEVSENAVRTWLPKQTTNVSPLRLTDVNRGINNQDWRLPL 60
           MVGTMKQF+E +D+GGGSRGFEVSEN VR WLPKQ T+V PLRLTDVNRGIN  DWRLPL
Sbjct: 190 MVGTMKQFTEGDDTGGGSRGFEVSENVVRAWLPKQATDVHPLRLTDVNRGINTLDWRLPL 249

Query: 61  PGSFGNEVARVLGGGLVPGCLVLIGGDPGVGKSTLLLQIAAILAEGCGEDKSTSIVYVSG 120
           PG FGNEVARVLGGGLVPG LVL+GGDPGVGKSTLLLQIAAILAE CGE   TS++YVSG
Sbjct: 250 PGPFGNEVARVLGGGLVPGSLVLVGGDPGVGKSTLLLQIAAILAEACGEGDLTSVIYVSG 309

Query: 121 EESLEQIGNRADRLNIRTENLFLYSSTNVEDIFEKIQPLSPRALIIDSIQTVYLQEVSGS 180
           EES++QIGNRADRLNI TENLFLYSST+VEDIFEKIQPLSPRALIIDSIQTVYLQ V+GS
Sbjct: 310 EESVDQIGNRADRLNIETENLFLYSSTDVEDIFEKIQPLSPRALIIDSIQTVYLQGVAGS 369

Query: 181 AGGLSQVKECTSAFLRFAKRTGIPILLIGHVTKSGEISGPRLLEHIVDVVLYMEGEKCSL 240
           AGG+ QVKECTSA LRFAKRTGIPILLIGHV KSGE++GPR+LEHIVDVVLYMEGEKCS 
Sbjct: 370 AGGIGQVKECTSALLRFAKRTGIPILLIGHVNKSGEVAGPRVLEHIVDVVLYMEGEKCSS 429

Query: 241 HRLLRPVKNRFGSTDELGVFEMLPSGLEVVSNPSEMFRRDDYANTNSEYLAGLAVAVIMD 300
           HRLLRPVKNRFGSTDELGVFEMLPSGLEVVSNPSEMFRRD+ AN+NSEYLAGLAVAVIMD
Sbjct: 430 HRLLRPVKNRFGSTDELGVFEMLPSGLEVVSNPSEMFRRDNNANSNSEYLAGLAVAVIMD 489

Query: 301 GNQTFLLEIQALCLSKSSLDRHVNGIQPSRADMIISVLMKQVGLKLQECKIFINVVSGAS 360
           G +TFLLEIQALCLS+SS+ RHVNGIQ S+ADMIISVLMKQ GLKLQ+  IF+NVVSG +
Sbjct: 490 GTRTFLLEIQALCLSRSSVSRHVNGIQQSKADMIISVLMKQAGLKLQDSVIFLNVVSGVT 549

Query: 361 LTETAGDLATAMAICSSFLEFPIPNDIAFIGEIGLGGELRMVGRMDRRINTVAKLGFKRC 420
           LTETAGDLA AMAICSSFLEFPIPNDIAFIGEIGLGGELRMV RM++RINTV+KLGFKRC
Sbjct: 550 LTETAGDLAIAMAICSSFLEFPIPNDIAFIGEIGLGGELRMVSRMEKRINTVSKLGFKRC 609

Query: 421 IVPKSAENCLGVVRLGEMKLIGCRILKDVINNVFMANN 459
           +VPKSAE CLGVV LGE +LIGCR LKDVIN+VFMA +
Sbjct: 610 VVPKSAEKCLGVVELGETRLIGCRNLKDVINDVFMARD 647

[Close]

BLAST of PI0020468.1 vs. ExPASy TrEMBL
Match: A0A6J1DHZ5 (uncharacterized protein LOC111021088 OS=Momordica charantia OX=3673 GN=LOC111021088 PE=4 SV=1)

HSP 1 Score: 778.5 bits (2009), Expect = 1.6e-221
Identity = 394/464 (84.91%), Postives = 422/464 (90.95%), Query Frame = 0


Query: 1   MVGTMKQFSEVNDSGGGSRGFEVSENAVRTWLPKQTTNVSPLRLTDVNRGINNQDWRLPL 60
           MVGTMKQFSE  DSGGGSRGFEVSEN VR WLPKQ T+V P RLTDVNRGIN  DWRLPL
Sbjct: 173 MVGTMKQFSEGEDSGGGSRGFEVSENVVRAWLPKQATDVHPQRLTDVNRGINTLDWRLPL 232

Query: 61  PGSFGNEVARVLGGGLVPGCLVLIGGDPGVGKSTLLLQIAAILAEGCGEDKSTSIVYVSG 120
           PG FG+EVARVLGGGLVPG LVL+GGDPGVGKSTLLLQIAAI+AEG GE  S S+VYVSG
Sbjct: 233 PGPFGDEVARVLGGGLVPGSLVLVGGDPGVGKSTLLLQIAAIIAEGRGEGGSASVVYVSG 292

Query: 121 EESLEQIGNRADRLNIRTENLFLYSSTNVEDIFEKIQPLSPRALIIDSIQTVYLQEVSGS 180
           EES+EQIGNRADRL I  ENLFLYSST+VEDIFEKIQPLSPRALIIDSIQTVYLQ V+GS
Sbjct: 293 EESVEQIGNRADRLKIEAENLFLYSSTDVEDIFEKIQPLSPRALIIDSIQTVYLQGVAGS 352

Query: 181 AGGLSQVKECTSAFLRFAKRTGIPILLIGHVTKSGEISGPRLLEHIVDVVLYMEGEKCSL 240
           AGG+ QVKECTSA LRFAKRTGIPILLIGHV KSGE++GPR+LEHIVDVVLYMEGEKCS 
Sbjct: 353 AGGIGQVKECTSALLRFAKRTGIPILLIGHVNKSGEVAGPRVLEHIVDVVLYMEGEKCSA 412

Query: 241 HRLLRPVKNRFGSTDELGVFEMLPSGLEVVSNPSEMFRRDDYANTNSEYLAGLAVAVIMD 300
           HRLLRPVKNRFGSTDELGVFEMLPSGLEVVSNPSEMFRRD  A++NSEYLAGLAVAVIMD
Sbjct: 413 HRLLRPVKNRFGSTDELGVFEMLPSGLEVVSNPSEMFRRDHNADSNSEYLAGLAVAVIMD 472

Query: 301 GNQTFLLEIQALCLSKSSLDRHVNGIQPSRADMIISVLMKQVGLKLQECKIFINVVSGAS 360
           G +TFLLEIQALCLS+SS+ RHVNGIQ S+ADMIISVLMKQ GLKLQE  IF+NVVSG +
Sbjct: 473 GTRTFLLEIQALCLSRSSVTRHVNGIQQSKADMIISVLMKQAGLKLQESVIFLNVVSGVT 532

Query: 361 LTETAGDLATAMAICSSFLEFPIPNDIAFIGEIGLGGELRMVGRMDRRINTVAKLGFKRC 420
           LTETAGDLA AMAICSSFLEFPIPNDIAFIGEIGLGGELR V RM++RINTV KLGFKRC
Sbjct: 533 LTETAGDLAIAMAICSSFLEFPIPNDIAFIGEIGLGGELRTVSRMEKRINTVVKLGFKRC 592

Query: 421 IVPKSAENCLGVVRLGEMKLIGCRILKDVINNVFMANNDEVMNH 465
           +VPKSAENCLGVV LG+MKLIGCR LKDV+NNVFMA ++ +  H
Sbjct: 593 VVPKSAENCLGVVELGDMKLIGCRNLKDVMNNVFMARDEAMHRH 636

[Close]

BLAST of PI0020468.1 vs. ExPASy TrEMBL
Match: A0A6J1GX44 (uncharacterized protein LOC111457955 OS=Cucurbita moschata OX=3662 GN=LOC111457955 PE=4 SV=1)

HSP 1 Score: 772.7 bits (1994), Expect = 8.7e-220
Identity = 391/458 (85.37%), Postives = 419/458 (91.48%), Query Frame = 0


Query: 1   MVGTMKQFSEVNDSGGGSRGFEVSENAVRTWLPKQTTNVSPLRLTDVNRGINNQDWRLPL 60
           MVGTMKQFSE +D+GGGSRGFEVSE  VR WLPKQ T+V PLRLTDVNRGIN  DWRLPL
Sbjct: 189 MVGTMKQFSEGDDTGGGSRGFEVSEKMVRAWLPKQATDVHPLRLTDVNRGINTLDWRLPL 248

Query: 61  PGSFGNEVARVLGGGLVPGCLVLIGGDPGVGKSTLLLQIAAILAEGCGEDKSTSIVYVSG 120
           PG FGNEVARVLGGGLVPG LVL+GGDPGVGKSTLLLQIAAILAEG  E   TS++YVSG
Sbjct: 249 PGPFGNEVARVLGGGLVPGSLVLVGGDPGVGKSTLLLQIAAILAEGRDEGDLTSVIYVSG 308

Query: 121 EESLEQIGNRADRLNIRTENLFLYSSTNVEDIFEKIQPLSPRALIIDSIQTVYLQEVSGS 180
           EES+EQIGNRADRLNI TENLFLYSST+VEDIFEKIQPLSPRALI+DSIQTVYLQ V+GS
Sbjct: 309 EESVEQIGNRADRLNIETENLFLYSSTDVEDIFEKIQPLSPRALIVDSIQTVYLQGVAGS 368

Query: 181 AGGLSQVKECTSAFLRFAKRTGIPILLIGHVTKSGEISGPRLLEHIVDVVLYMEGEKCSL 240
           AGG+ QVKECTSA LRFAKRTGIPI LIGHV KSGE++GPR+LEHIVDVVLYMEGEKCS 
Sbjct: 369 AGGIGQVKECTSALLRFAKRTGIPIFLIGHVNKSGEVAGPRVLEHIVDVVLYMEGEKCSS 428

Query: 241 HRLLRPVKNRFGSTDELGVFEMLPSGLEVVSNPSEMFRRDDYANTNSEYLAGLAVAVIMD 300
           HRLLRPVKNRFGSTDELGVFEMLPSGLEVVSNPSEMFRRD  AN +SEYLAGLAVAVIMD
Sbjct: 429 HRLLRPVKNRFGSTDELGVFEMLPSGLEVVSNPSEMFRRDHNANLSSEYLAGLAVAVIMD 488

Query: 301 GNQTFLLEIQALCLSKSSLDRHVNGIQPSRADMIISVLMKQVGLKLQECKIFINVVSGAS 360
           G +TFLLEIQALCLS+SS+ RHVNGIQ S+ADMIISVLMKQ GLKLQ+  IF+NVVSG +
Sbjct: 489 GTRTFLLEIQALCLSRSSVSRHVNGIQQSKADMIISVLMKQAGLKLQDSVIFLNVVSGVT 548

Query: 361 LTETAGDLATAMAICSSFLEFPIPNDIAFIGEIGLGGELRMVGRMDRRINTVAKLGFKRC 420
           LTETAGDLA AMAICSSFLEFPIPNDIAFIGEIGLGGELRMV RM++RINTVAKLGFKRC
Sbjct: 549 LTETAGDLAIAMAICSSFLEFPIPNDIAFIGEIGLGGELRMVSRMEKRINTVAKLGFKRC 608

Query: 421 IVPKSAENCLGVVRLGEMKLIGCRILKDVINNVFMANN 459
           +VPKSAE CLGVV  GEM+LIGCR LKDVIN+VFMA +
Sbjct: 609 VVPKSAEKCLGVVESGEMRLIGCRNLKDVINDVFMARD 646

[Close]

BLAST of PI0020468.1 vs. ExPASy TrEMBL
Match: A0A5D3C9C8 (DNA repair protein RadA isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold323G00200 PE=4 SV=1)

HSP 1 Score: 751.1 bits (1938), Expect = 2.7e-213
Identity = 387/458 (84.50%), Postives = 409/458 (89.30%), Query Frame = 0


Query: 2   VGTMKQFSEVNDSGGGSRGFEVSENAVRTWLPKQTTNVSPLRLTDVNRGINNQDWRLPLP 61
           VGTMKQFS  NDS GGS          RTWLPKQ TNV+P+RLTDVNRGIN QDWRLPLP
Sbjct: 180 VGTMKQFSVGNDSEGGS----------RTWLPKQVTNVNPMRLTDVNRGINAQDWRLPLP 239

Query: 62  GSFGNEVARVLGGGLVPGCLVLIGGDPGVGKSTLLLQIAAILAEGCGEDKSTSIVYVSGE 121
           G FGNEVARVLGGGLVPG LVLIGGDPGVGKSTLLLQIAAILAEGCGE  S S+VYVSGE
Sbjct: 240 GPFGNEVARVLGGGLVPGSLVLIGGDPGVGKSTLLLQIAAILAEGCGEGGSKSVVYVSGE 299

Query: 122 ESLEQIGNRADRLNIRTENLFLYSSTNVEDIFEKIQPLSPRALIIDSIQTVYLQEVSGSA 181
           ES+EQIGNRADRL I+TENLFLYSST+VEDIFEKIQPLSPRALIIDSIQTVYLQEV+GSA
Sbjct: 300 ESVEQIGNRADRLKIQTENLFLYSSTDVEDIFEKIQPLSPRALIIDSIQTVYLQEVAGSA 359

Query: 182 GGLSQVKECTSAFLRFAKRTGIPILLIGHVTKSGEISGPRLLEHIVDVVLYMEGEKCSLH 241
           GG++QVKECTSAFLR+AK TGIPI LIGHV KSGE++GPRLLEHIVDVVLY+EGEKCSLH
Sbjct: 360 GGITQVKECTSAFLRYAKTTGIPIFLIGHVNKSGEVAGPRLLEHIVDVVLYVEGEKCSLH 419

Query: 242 RLLRPVKNRFGSTDELGVFEMLPSGLEVVSNPSEMFRRDDYANTNSEYLAGLAVAVIMDG 301
           RLLRPVKNRFGSTDELGVFEMLPSGLEVVSNPSEMFRRD   N NSE+L GLAVAV+MDG
Sbjct: 420 RLLRPVKNRFGSTDELGVFEMLPSGLEVVSNPSEMFRRDHNGNLNSEHLTGLAVAVVMDG 479

Query: 302 NQTFLLEIQALCLSKSSLDRHVNGIQPSRADMIISVLMKQVGLKLQECKIFINVVSGASL 361
            QTFLLEIQALC S SS   HVNGIQ  RADMIISVLMKQ GLKLQ   IFINVVSG +L
Sbjct: 480 TQTFLLEIQALCSSSSSFVTHVNGIQNRRADMIISVLMKQAGLKLQTNAIFINVVSGVTL 539

Query: 362 TETAGDLATAMAICSSFLEFPIPNDIAFIGEIGLGGELRMVGRMDRRINTVAKLGFKRCI 421
           TETAGDLA AMAICSSFLEF IPNDIAFIGEIGLGGELRMVGRM++RINTVAKLGFKRC+
Sbjct: 540 TETAGDLAIAMAICSSFLEFNIPNDIAFIGEIGLGGELRMVGRMEKRINTVAKLGFKRCV 599

Query: 422 VPKSAENCLGVVRLGEMKLIGCRILKDVINNVFMANND 460
           VPKSAENCLGVV LG+MKLIGC  LKDVINNVFM  ++
Sbjct: 600 VPKSAENCLGVVGLGKMKLIGCTNLKDVINNVFMVRDE 627

[Close]

BLAST of PI0020468.1 vs. ExPASy TrEMBL
Match: A0A1S3BHR0 (DNA repair protein RadA isoform X1 OS=Cucumis melo OX=3656 GN=LOC103489983 PE=4 SV=1)

HSP 1 Score: 751.1 bits (1938), Expect = 2.7e-213
Identity = 387/458 (84.50%), Postives = 409/458 (89.30%), Query Frame = 0


Query: 2   VGTMKQFSEVNDSGGGSRGFEVSENAVRTWLPKQTTNVSPLRLTDVNRGINNQDWRLPLP 61
           VGTMKQFS  NDS GGS          RTWLPKQ TNV+P+RLTDVNRGIN QDWRLPLP
Sbjct: 180 VGTMKQFSVGNDSEGGS----------RTWLPKQVTNVNPMRLTDVNRGINAQDWRLPLP 239

Query: 62  GSFGNEVARVLGGGLVPGCLVLIGGDPGVGKSTLLLQIAAILAEGCGEDKSTSIVYVSGE 121
           G FGNEVARVLGGGLVPG LVLIGGDPGVGKSTLLLQIAAILAEGCGE  S S+VYVSGE
Sbjct: 240 GPFGNEVARVLGGGLVPGSLVLIGGDPGVGKSTLLLQIAAILAEGCGEGGSKSVVYVSGE 299

Query: 122 ESLEQIGNRADRLNIRTENLFLYSSTNVEDIFEKIQPLSPRALIIDSIQTVYLQEVSGSA 181
           ES+EQIGNRADRL I+TENLFLYSST+VEDIFEKIQPLSPRALIIDSIQTVYLQEV+GSA
Sbjct: 300 ESVEQIGNRADRLKIQTENLFLYSSTDVEDIFEKIQPLSPRALIIDSIQTVYLQEVAGSA 359

Query: 182 GGLSQVKECTSAFLRFAKRTGIPILLIGHVTKSGEISGPRLLEHIVDVVLYMEGEKCSLH 241
           GG++QVKECTSAFLR+AK TGIPI LIGHV KSGE++GPRLLEHIVDVVLY+EGEKCSLH
Sbjct: 360 GGITQVKECTSAFLRYAKTTGIPIFLIGHVNKSGEVAGPRLLEHIVDVVLYVEGEKCSLH 419

Query: 242 RLLRPVKNRFGSTDELGVFEMLPSGLEVVSNPSEMFRRDDYANTNSEYLAGLAVAVIMDG 301
           RLLRPVKNRFGSTDELGVFEMLPSGLEVVSNPSEMFRRD   N NSE+L GLAVAV+MDG
Sbjct: 420 RLLRPVKNRFGSTDELGVFEMLPSGLEVVSNPSEMFRRDHNGNLNSEHLTGLAVAVVMDG 479

Query: 302 NQTFLLEIQALCLSKSSLDRHVNGIQPSRADMIISVLMKQVGLKLQECKIFINVVSGASL 361
            QTFLLEIQALC S SS   HVNGIQ  RADMIISVLMKQ GLKLQ   IFINVVSG +L
Sbjct: 480 TQTFLLEIQALCSSSSSFVTHVNGIQNRRADMIISVLMKQAGLKLQTNAIFINVVSGVTL 539

Query: 362 TETAGDLATAMAICSSFLEFPIPNDIAFIGEIGLGGELRMVGRMDRRINTVAKLGFKRCI 421
           TETAGDLA AMAICSSFLEF IPNDIAFIGEIGLGGELRMVGRM++RINTVAKLGFKRC+
Sbjct: 540 TETAGDLAIAMAICSSFLEFNIPNDIAFIGEIGLGGELRMVGRMEKRINTVAKLGFKRCV 599

Query: 422 VPKSAENCLGVVRLGEMKLIGCRILKDVINNVFMANND 460
           VPKSAENCLGVV LG+MKLIGC  LKDVINNVFM  ++
Sbjct: 600 VPKSAENCLGVVGLGKMKLIGCTNLKDVINNVFMVRDE 627

[Close]

BLAST of PI0020468.1 vs. NCBI nr
Match: XP_022980476.1 (uncharacterized protein LOC111479856 [Cucurbita maxima])

HSP 1 Score: 782.3 bits (2019), Expect = 2.3e-222
Identity = 393/458 (85.81%), Postives = 424/458 (92.58%), Query Frame = 0


Query: 1   MVGTMKQFSEVNDSGGGSRGFEVSENAVRTWLPKQTTNVSPLRLTDVNRGINNQDWRLPL 60
           MVGTMKQF+E +D+GGGSRGFEVSEN VR WLPKQ T+V PLRLTDVNRGIN  DWRLPL
Sbjct: 190 MVGTMKQFTEGDDTGGGSRGFEVSENVVRAWLPKQATDVHPLRLTDVNRGINTLDWRLPL 249

Query: 61  PGSFGNEVARVLGGGLVPGCLVLIGGDPGVGKSTLLLQIAAILAEGCGEDKSTSIVYVSG 120
           PG FGNEVARVLGGGLVPG LVL+GGDPGVGKSTLLLQIAAILAE CGE   TS++YVSG
Sbjct: 250 PGPFGNEVARVLGGGLVPGSLVLVGGDPGVGKSTLLLQIAAILAEACGEGDLTSVIYVSG 309

Query: 121 EESLEQIGNRADRLNIRTENLFLYSSTNVEDIFEKIQPLSPRALIIDSIQTVYLQEVSGS 180
           EES++QIGNRADRLNI TENLFLYSST+VEDIFEKIQPLSPRALIIDSIQTVYLQ V+GS
Sbjct: 310 EESVDQIGNRADRLNIETENLFLYSSTDVEDIFEKIQPLSPRALIIDSIQTVYLQGVAGS 369

Query: 181 AGGLSQVKECTSAFLRFAKRTGIPILLIGHVTKSGEISGPRLLEHIVDVVLYMEGEKCSL 240
           AGG+ QVKECTSA LRFAKRTGIPILLIGHV KSGE++GPR+LEHIVDVVLYMEGEKCS 
Sbjct: 370 AGGIGQVKECTSALLRFAKRTGIPILLIGHVNKSGEVAGPRVLEHIVDVVLYMEGEKCSS 429

Query: 241 HRLLRPVKNRFGSTDELGVFEMLPSGLEVVSNPSEMFRRDDYANTNSEYLAGLAVAVIMD 300
           HRLLRPVKNRFGSTDELGVFEMLPSGLEVVSNPSEMFRRD+ AN+NSEYLAGLAVAVIMD
Sbjct: 430 HRLLRPVKNRFGSTDELGVFEMLPSGLEVVSNPSEMFRRDNNANSNSEYLAGLAVAVIMD 489

Query: 301 GNQTFLLEIQALCLSKSSLDRHVNGIQPSRADMIISVLMKQVGLKLQECKIFINVVSGAS 360
           G +TFLLEIQALCLS+SS+ RHVNGIQ S+ADMIISVLMKQ GLKLQ+  IF+NVVSG +
Sbjct: 490 GTRTFLLEIQALCLSRSSVSRHVNGIQQSKADMIISVLMKQAGLKLQDSVIFLNVVSGVT 549

Query: 361 LTETAGDLATAMAICSSFLEFPIPNDIAFIGEIGLGGELRMVGRMDRRINTVAKLGFKRC 420
           LTETAGDLA AMAICSSFLEFPIPNDIAFIGEIGLGGELRMV RM++RINTV+KLGFKRC
Sbjct: 550 LTETAGDLAIAMAICSSFLEFPIPNDIAFIGEIGLGGELRMVSRMEKRINTVSKLGFKRC 609

Query: 421 IVPKSAENCLGVVRLGEMKLIGCRILKDVINNVFMANN 459
           +VPKSAE CLGVV LGE +LIGCR LKDVIN+VFMA +
Sbjct: 610 VVPKSAEKCLGVVELGETRLIGCRNLKDVINDVFMARD 647

[Close]

BLAST of PI0020468.1 vs. NCBI nr
Match: XP_023527681.1 (uncharacterized protein LOC111790828 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 778.5 bits (2009), Expect = 3.3e-221
Identity = 394/458 (86.03%), Postives = 421/458 (91.92%), Query Frame = 0


Query: 1   MVGTMKQFSEVNDSGGGSRGFEVSENAVRTWLPKQTTNVSPLRLTDVNRGINNQDWRLPL 60
           MVGTMKQFSE +D+GGGSRGFEVSEN VR WLPKQ T+V PLRLTDVNRGIN  DWRLPL
Sbjct: 181 MVGTMKQFSEGDDTGGGSRGFEVSENVVRAWLPKQATDVHPLRLTDVNRGINTLDWRLPL 240

Query: 61  PGSFGNEVARVLGGGLVPGCLVLIGGDPGVGKSTLLLQIAAILAEGCGEDKSTSIVYVSG 120
           PG FGNEVARVLGGGLVPG LVL+GGDPGVGKSTLLLQIAAILAEG GE   TS++YVSG
Sbjct: 241 PGPFGNEVARVLGGGLVPGSLVLVGGDPGVGKSTLLLQIAAILAEGRGESDLTSVIYVSG 300

Query: 121 EESLEQIGNRADRLNIRTENLFLYSSTNVEDIFEKIQPLSPRALIIDSIQTVYLQEVSGS 180
           EES+EQIGNRADRLNI TENLFLYSST+VEDIFEKIQPLSPRALIIDSIQTVYLQ V+GS
Sbjct: 301 EESVEQIGNRADRLNIETENLFLYSSTDVEDIFEKIQPLSPRALIIDSIQTVYLQGVAGS 360

Query: 181 AGGLSQVKECTSAFLRFAKRTGIPILLIGHVTKSGEISGPRLLEHIVDVVLYMEGEKCSL 240
           AGG+ QVKECTSA LRFAKRT IPILLIGHV KSGE++GPR+LEHIVDVVLYMEGEKCS 
Sbjct: 361 AGGIGQVKECTSALLRFAKRTSIPILLIGHVNKSGEVAGPRVLEHIVDVVLYMEGEKCSS 420

Query: 241 HRLLRPVKNRFGSTDELGVFEMLPSGLEVVSNPSEMFRRDDYANTNSEYLAGLAVAVIMD 300
           HRLLRPVKNRFGSTDELGVFEMLPSGLEVVSNPSEMFRRD  AN+NSEYLAGLAVAVIMD
Sbjct: 421 HRLLRPVKNRFGSTDELGVFEMLPSGLEVVSNPSEMFRRDHNANSNSEYLAGLAVAVIMD 480

Query: 301 GNQTFLLEIQALCLSKSSLDRHVNGIQPSRADMIISVLMKQVGLKLQECKIFINVVSGAS 360
           G +TFLLEIQALCLS+SS+ RHVNGIQ S+ADMIISVLMKQ GLKLQ+  IF+NVVSG +
Sbjct: 481 GTRTFLLEIQALCLSRSSVSRHVNGIQQSKADMIISVLMKQAGLKLQDSVIFLNVVSGVT 540

Query: 361 LTETAGDLATAMAICSSFLEFPIPNDIAFIGEIGLGGELRMVGRMDRRINTVAKLGFKRC 420
           LTETAGDLA AMAICSSFLEFPIPNDIAFIGEIGLGGELRMV RM++RINTVAKLGFKRC
Sbjct: 541 LTETAGDLAIAMAICSSFLEFPIPNDIAFIGEIGLGGELRMVSRMEKRINTVAKLGFKRC 600

Query: 421 IVPKSAENCLGVVRLGEMKLIGCRILKDVINNVFMANN 459
           +VPKSAE CLGVV LGE +LIGC  LKDVIN+VFMA +
Sbjct: 601 VVPKSAEKCLGVVELGETRLIGCSNLKDVINDVFMARD 638

[Close]

BLAST of PI0020468.1 vs. NCBI nr
Match: XP_022153628.1 (uncharacterized protein LOC111021088 [Momordica charantia])

HSP 1 Score: 778.5 bits (2009), Expect = 3.3e-221
Identity = 394/464 (84.91%), Postives = 422/464 (90.95%), Query Frame = 0


Query: 1   MVGTMKQFSEVNDSGGGSRGFEVSENAVRTWLPKQTTNVSPLRLTDVNRGINNQDWRLPL 60
           MVGTMKQFSE  DSGGGSRGFEVSEN VR WLPKQ T+V P RLTDVNRGIN  DWRLPL
Sbjct: 173 MVGTMKQFSEGEDSGGGSRGFEVSENVVRAWLPKQATDVHPQRLTDVNRGINTLDWRLPL 232

Query: 61  PGSFGNEVARVLGGGLVPGCLVLIGGDPGVGKSTLLLQIAAILAEGCGEDKSTSIVYVSG 120
           PG FG+EVARVLGGGLVPG LVL+GGDPGVGKSTLLLQIAAI+AEG GE  S S+VYVSG
Sbjct: 233 PGPFGDEVARVLGGGLVPGSLVLVGGDPGVGKSTLLLQIAAIIAEGRGEGGSASVVYVSG 292

Query: 121 EESLEQIGNRADRLNIRTENLFLYSSTNVEDIFEKIQPLSPRALIIDSIQTVYLQEVSGS 180
           EES+EQIGNRADRL I  ENLFLYSST+VEDIFEKIQPLSPRALIIDSIQTVYLQ V+GS
Sbjct: 293 EESVEQIGNRADRLKIEAENLFLYSSTDVEDIFEKIQPLSPRALIIDSIQTVYLQGVAGS 352

Query: 181 AGGLSQVKECTSAFLRFAKRTGIPILLIGHVTKSGEISGPRLLEHIVDVVLYMEGEKCSL 240
           AGG+ QVKECTSA LRFAKRTGIPILLIGHV KSGE++GPR+LEHIVDVVLYMEGEKCS 
Sbjct: 353 AGGIGQVKECTSALLRFAKRTGIPILLIGHVNKSGEVAGPRVLEHIVDVVLYMEGEKCSA 412

Query: 241 HRLLRPVKNRFGSTDELGVFEMLPSGLEVVSNPSEMFRRDDYANTNSEYLAGLAVAVIMD 300
           HRLLRPVKNRFGSTDELGVFEMLPSGLEVVSNPSEMFRRD  A++NSEYLAGLAVAVIMD
Sbjct: 413 HRLLRPVKNRFGSTDELGVFEMLPSGLEVVSNPSEMFRRDHNADSNSEYLAGLAVAVIMD 472

Query: 301 GNQTFLLEIQALCLSKSSLDRHVNGIQPSRADMIISVLMKQVGLKLQECKIFINVVSGAS 360
           G +TFLLEIQALCLS+SS+ RHVNGIQ S+ADMIISVLMKQ GLKLQE  IF+NVVSG +
Sbjct: 473 GTRTFLLEIQALCLSRSSVTRHVNGIQQSKADMIISVLMKQAGLKLQESVIFLNVVSGVT 532

Query: 361 LTETAGDLATAMAICSSFLEFPIPNDIAFIGEIGLGGELRMVGRMDRRINTVAKLGFKRC 420
           LTETAGDLA AMAICSSFLEFPIPNDIAFIGEIGLGGELR V RM++RINTV KLGFKRC
Sbjct: 533 LTETAGDLAIAMAICSSFLEFPIPNDIAFIGEIGLGGELRTVSRMEKRINTVVKLGFKRC 592

Query: 421 IVPKSAENCLGVVRLGEMKLIGCRILKDVINNVFMANNDEVMNH 465
           +VPKSAENCLGVV LG+MKLIGCR LKDV+NNVFMA ++ +  H
Sbjct: 593 VVPKSAENCLGVVELGDMKLIGCRNLKDVMNNVFMARDEAMHRH 636

[Close]

BLAST of PI0020468.1 vs. NCBI nr
Match: KAG6581870.1 (hypothetical protein SDJN03_21872, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 775.8 bits (2002), Expect = 2.1e-220
Identity = 393/458 (85.81%), Postives = 420/458 (91.70%), Query Frame = 0


Query: 1   MVGTMKQFSEVNDSGGGSRGFEVSENAVRTWLPKQTTNVSPLRLTDVNRGINNQDWRLPL 60
           MVGTMKQFSE +D+GGGSRGFEVSE  VR WLPKQ T+V PLRLTDVNRGIN  DWRLPL
Sbjct: 168 MVGTMKQFSEGDDTGGGSRGFEVSEKMVRAWLPKQATDVHPLRLTDVNRGINTLDWRLPL 227

Query: 61  PGSFGNEVARVLGGGLVPGCLVLIGGDPGVGKSTLLLQIAAILAEGCGEDKSTSIVYVSG 120
           PG FGNEVARVLGGGLVPG LVL+GGDPGVGKSTLLLQIAAILAEG GE   TS++YVSG
Sbjct: 228 PGPFGNEVARVLGGGLVPGSLVLVGGDPGVGKSTLLLQIAAILAEGRGEGDLTSVIYVSG 287

Query: 121 EESLEQIGNRADRLNIRTENLFLYSSTNVEDIFEKIQPLSPRALIIDSIQTVYLQEVSGS 180
           EES+EQIGNRADRLNI TENLFLYSST+VEDIFEKIQPLSPRALIIDSIQTVYLQ V+GS
Sbjct: 288 EESVEQIGNRADRLNIETENLFLYSSTDVEDIFEKIQPLSPRALIIDSIQTVYLQGVAGS 347

Query: 181 AGGLSQVKECTSAFLRFAKRTGIPILLIGHVTKSGEISGPRLLEHIVDVVLYMEGEKCSL 240
           AGG+ QVKECTSA LRFAKRTGIPI LIGHV KSGE++GPR+LEHIVDVVLYMEGEKCS 
Sbjct: 348 AGGIGQVKECTSALLRFAKRTGIPIFLIGHVNKSGEVAGPRVLEHIVDVVLYMEGEKCSS 407

Query: 241 HRLLRPVKNRFGSTDELGVFEMLPSGLEVVSNPSEMFRRDDYANTNSEYLAGLAVAVIMD 300
           HRLLRPVKNRFGSTDELGVFEMLPSGLEVVSNPSEMFRRD  AN +SEYLAGLAVAVIMD
Sbjct: 408 HRLLRPVKNRFGSTDELGVFEMLPSGLEVVSNPSEMFRRDHNANLSSEYLAGLAVAVIMD 467

Query: 301 GNQTFLLEIQALCLSKSSLDRHVNGIQPSRADMIISVLMKQVGLKLQECKIFINVVSGAS 360
           G +TFLLEIQALCLS+SS+ RHVNGIQ S+ADMIISVLMKQ GLKLQ+  IF+NVVSG +
Sbjct: 468 GTRTFLLEIQALCLSRSSVSRHVNGIQQSKADMIISVLMKQAGLKLQDSVIFLNVVSGVT 527

Query: 361 LTETAGDLATAMAICSSFLEFPIPNDIAFIGEIGLGGELRMVGRMDRRINTVAKLGFKRC 420
           LTETAGDLA AMAICSSFLEFPIPNDIAFIGEIGLGGELRMV RM++RINTVAKLGFKRC
Sbjct: 528 LTETAGDLAIAMAICSSFLEFPIPNDIAFIGEIGLGGELRMVSRMEKRINTVAKLGFKRC 587

Query: 421 IVPKSAENCLGVVRLGEMKLIGCRILKDVINNVFMANN 459
           +VPKSAE CLGVV  GEM+LIGCR LKDVIN+VFMA +
Sbjct: 588 VVPKSAEKCLGVVESGEMRLIGCRNLKDVINDVFMARD 625

[Close]

BLAST of PI0020468.1 vs. NCBI nr
Match: XP_038906306.1 (DNA repair protein RadA [Benincasa hispida])

HSP 1 Score: 774.6 bits (1999), Expect = 4.7e-220
Identity = 390/459 (84.97%), Postives = 423/459 (92.16%), Query Frame = 0


Query: 1   MVGTMKQFSEVNDSGGGSRGFEVSENAVRTWLPKQTTNVSPLRLTDVNRGINNQDWRLPL 60
           MVGTMKQFSE +DSGGGSRGFEVSEN VR WLPKQ T+ +PLRLTDVNRGIN +DWRLPL
Sbjct: 190 MVGTMKQFSEGDDSGGGSRGFEVSENVVRAWLPKQATDGNPLRLTDVNRGINTRDWRLPL 249

Query: 61  PGSFGNEVARVLGGGLVPGCLVLIGGDPGVGKSTLLLQIAAILAEGCGEDKSTSIVYVSG 120
           PG FG+EVARVLGGGLVPG LVLIGGDPGVGKSTLLLQIAA+LAEGCG+ + TS+VYVSG
Sbjct: 250 PGPFGSEVARVLGGGLVPGSLVLIGGDPGVGKSTLLLQIAALLAEGCGQGELTSVVYVSG 309

Query: 121 EESLEQIGNRADRLNIRTENLFLYSSTNVEDIFEKIQPLSPRALIIDSIQTVYLQEVSGS 180
           EES+EQIGNRADRLNI TENL+LYSST+VEDIFEKIQP+SPRALIIDSIQTVYLQ V+GS
Sbjct: 310 EESVEQIGNRADRLNIETENLYLYSSTDVEDIFEKIQPISPRALIIDSIQTVYLQGVAGS 369

Query: 181 AGGLSQVKECTSAFLRFAKRTGIPILLIGHVTKSGEISGPRLLEHIVDVVLYMEGEKCSL 240
           AGG+ QVKECTSA LRFAKRTGIPILLIGHV KSGE++GPR+LEHIVDVVLYMEG+KC  
Sbjct: 370 AGGIGQVKECTSALLRFAKRTGIPILLIGHVNKSGEVAGPRVLEHIVDVVLYMEGDKCLS 429

Query: 241 HRLLRPVKNRFGSTDELGVFEMLPSGLEVVSNPSEMFRRDDYANTNSEYLAGLAVAVIMD 300
           HRLLRPVKNRFGSTDELGVFEMLPSGLEVVSNPSEMFRRD  AN+NSEYLAGLAVAVIMD
Sbjct: 430 HRLLRPVKNRFGSTDELGVFEMLPSGLEVVSNPSEMFRRDHNANSNSEYLAGLAVAVIMD 489

Query: 301 GNQTFLLEIQALCLSKSSLDRHVNGIQPSRADMIISVLMKQVGLKLQECKIFINVVSGAS 360
           G +TFLLEIQALCLS+SS+ R VNGI  S+AD+IISVLMKQ GLKLQE  IF+NVVSG +
Sbjct: 490 GTRTFLLEIQALCLSRSSVTRQVNGIHQSKADLIISVLMKQAGLKLQESGIFLNVVSGLT 549

Query: 361 LTETAGDLATAMAICSSFLEFPIPNDIAFIGEIGLGGELRMVGRMDRRINTVAKLGFKRC 420
           LTETAGDLA AMAICSSFLEFPIPNDI FIGEIGLGGELRMV RM++RINTVAKLGFKRC
Sbjct: 550 LTETAGDLAIAMAICSSFLEFPIPNDIVFIGEIGLGGELRMVSRMEKRINTVAKLGFKRC 609

Query: 421 IVPKSAENCLGVVRLGEMKLIGCRILKDVINNVFMANND 460
           +VPKSAENCLG+V LGEMKLI CR LKDVINNVF+A  +
Sbjct: 610 VVPKSAENCLGLVELGEMKLICCRHLKDVINNVFIAGGE 648

[Close]

BLAST of PI0020468.1 vs. TAIR 10
Match: AT5G50340.1 (ATP-dependent peptidases;nucleotide binding;serine-type endopeptidases;DNA helicases;ATP binding;damaged DNA binding;nucleoside-triphosphatases )

HSP 1 Score: 585.1 bits (1507), Expect = 4.9e-167
Identity = 296/458 (64.63%), Postives = 372/458 (81.22%), Query Frame = 0


Query: 2   VGTMKQFSEVNDS-----GGGSRGFEVSENAVRTWLPKQTTNVSPLRLTDVNRGINNQDW 61
           VGTMK+FSE ++S     GG   G   +E    +WLP+Q T V P RLTDV  GI  Q W
Sbjct: 131 VGTMKRFSEGSESSASGGGGNGTGLGFTEGKGLSWLPEQAT-VQPHRLTDVIHGITQQQW 190

Query: 62  RLPLPGSFGNEVARVLGGGLVPGCLVLIGGDPGVGKSTLLLQIAAILAEGCGEDKSTSIV 121
           R+ LPG FGNEVARVLGGGL PG L+LIGGDPG+GKSTLLLQIA+I+AEG    +   ++
Sbjct: 191 RISLPGLFGNEVARVLGGGLAPGSLILIGGDPGIGKSTLLLQIASIIAEGSELAEPAPVL 250

Query: 122 YVSGEESLEQIGNRADRLNIRTENLFLYSSTNVEDIFEKIQPLSPRALIIDSIQTVYLQE 181
           Y+SGEES+EQIG+RADR+ I+TE L+L+SS++++DI  K   LSPRALIIDSIQTVYL++
Sbjct: 251 YISGEESVEQIGSRADRMRIQTEELYLFSSSDLQDILNKAHRLSPRALIIDSIQTVYLKD 310

Query: 182 VSGSAGGLSQVKECTSAFLRFAKRTGIPILLIGHVTKSGEISGPRLLEHIVDVVLYMEGE 241
           V+GSAGGL+QVKECTS  LRFAK++ IP+ L+GHVTK+G+I+GPR+LEHIVDVVLY+EGE
Sbjct: 311 VTGSAGGLTQVKECTSTLLRFAKKSNIPVFLVGHVTKAGDIAGPRVLEHIVDVVLYLEGE 370

Query: 242 KCSLHRLLRPVKNRFGSTDELGVFEMLPSGLEVVSNPSEMFRRDDYANTNSEYLAGLAVA 301
           + S +RLLR VKNRFGSTDELGVFEM  SGLEVVSNPS ++      N +S+ LAGLAVA
Sbjct: 371 ESSTYRLLRSVKNRFGSTDELGVFEMANSGLEVVSNPSGIYLSQQ--NPDSDVLAGLAVA 430

Query: 302 VIMDGNQTFLLEIQALCLSKSSLDRHVNGIQPSRADMIISVLMKQVGLKLQECKIFINVV 361
           V+MDG+++FL+E+QALC   S++ RHVNG+Q SRADMII+VLMKQ GL++QE  IF+NV 
Sbjct: 431 VVMDGSRSFLIEVQALCSPGSTVSRHVNGVQASRADMIIAVLMKQAGLRIQENGIFLNVA 490

Query: 362 SGASLTETAGDLATAMAICSSFLEFPIPNDIAFIGEIGLGGELRMVGRMDRRINTVAKLG 421
           +G +L+ETAGDLA A AICSSFLEFPIP+ +AFIGEIGLGGE+R V RM++R++TVAKLG
Sbjct: 491 NGMALSETAGDLAIAAAICSSFLEFPIPHGVAFIGEIGLGGEVRTVPRMEKRVSTVAKLG 550

Query: 422 FKRCIVPKSAENCLGVVRLGEMKLIGCRILKDVINNVF 455
           F +C+VPKS E  L  + L E+++IGC+ LK++IN VF
Sbjct: 551 FNKCVVPKSVEESLKALSLKEIEIIGCKNLKELINAVF 585

The following BLAST results are available for this feature:

BLAST of PI0020468.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9KGG1	9.6e-91	44.34	DNA repair protein RadA OS=Bacillus halodurans (strain ATCC BAA-125 / DSM 18197 ...	[more]
Q92F42	7.6e-88	45.08	DNA repair protein RadA OS=Listeria innocua serovar 6a (strain ATCC BAA-680 / CL...	[more]
P37572	1.7e-87	47.76	DNA repair protein RadA OS=Bacillus subtilis (strain 168) OX=224308 GN=radA PE=1...	[more]
Q48761	2.2e-87	47.11	DNA repair protein RadA OS=Listeria monocytogenes serovar 1/2a (strain ATCC BAA-...	[more]
Q8DRP0	3.0e-84	44.10	DNA repair protein RadA OS=Streptococcus pneumoniae (strain ATCC BAA-255 / R6) O...	[more]

BLAST of PI0020468.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1ITP4	1.1e-222	85.81	uncharacterized protein LOC111479856 OS=Cucurbita maxima OX=3661 GN=LOC111479856...	[more]
A0A6J1DHZ5	1.6e-221	84.91	uncharacterized protein LOC111021088 OS=Momordica charantia OX=3673 GN=LOC111021...	[more]
A0A6J1GX44	8.7e-220	85.37	uncharacterized protein LOC111457955 OS=Cucurbita moschata OX=3662 GN=LOC1114579...	[more]
A0A5D3C9C8	2.7e-213	84.50	DNA repair protein RadA isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E56...	[more]
A0A1S3BHR0	2.7e-213	84.50	DNA repair protein RadA isoform X1 OS=Cucumis melo OX=3656 GN=LOC103489983 PE=4 ...	[more]

BLAST of PI0020468.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022980476.1	2.3e-222	85.81	uncharacterized protein LOC111479856 [Cucurbita maxima]	[more]
XP_023527681.1	3.3e-221	86.03	uncharacterized protein LOC111790828 [Cucurbita pepo subsp. pepo]	[more]
XP_022153628.1	3.3e-221	84.91	uncharacterized protein LOC111021088 [Momordica charantia]	[more]
KAG6581870.1	2.1e-220	85.81	hypothetical protein SDJN03_21872, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_038906306.1	4.7e-220	84.97	DNA repair protein RadA [Benincasa hispida]	[more]

BLAST of PI0020468.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G50340.1	4.9e-167	64.63	ATP-dependent peptidases;nucleotide binding;serine-type endopeptidases;DNA helic...	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PRINTS	PR01874	DNAREPAIRADA	coord: 167..191 score: 45.23 coord: 241..267 score: 62.01 coord: 206..234 score: 61.89 coord: 70..98 score: 78.07 coord: 318..341 score: 29.91
None	No IPR available	PFAM	PF13541	ChlI	coord: 337..425 e-value: 2.6E-8 score: 33.8
None	No IPR available	PFAM	PF13481	AAA_25	coord: 72..215 e-value: 8.2E-16 score: 58.1
None	No IPR available	PANTHER	PTHR32472:SF10	DNA REPAIR PROTEIN RADA-LIKE PROTEIN	coord: 2..455
None	No IPR available	PANTHER	PTHR32472	DNA REPAIR PROTEIN RADA	coord: 2..455
IPR003593	AAA+ ATPase domain	SMART	SM00382	AAA_5	coord: 78..237 e-value: 1.4E-10 score: 51.2
IPR004504	DNA repair protein RadA	TIGRFAM	TIGR00416	TIGR00416	coord: 66..442 e-value: 2.9E-126 score: 419.8
IPR027417	P-loop containing nucleoside triphosphate hydrolase	GENE3D	3.40.50.300		coord: 67..270 e-value: 3.1E-36 score: 127.0
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	52540	P-loop containing nucleoside triphosphate hydrolases	coord: 70..263
IPR014721	Ribosomal protein S5 domain 2-type fold, subgroup	GENE3D	3.30.230.10		coord: 290..463 e-value: 1.5E-20 score: 75.7
IPR020588	DNA recombination and repair protein RecA-like, ATP-binding domain	PROSITE	PS50162	RECA_2	coord: 58..211 score: 22.866417
IPR020568	Ribosomal protein S5 domain 2-type fold	SUPERFAMILY	54211	Ribosomal protein S5 domain 2-like	coord: 248..453

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
PI0020468	PI0020468	gene

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
PI0020468.1-five_prime_utr	PI0020468.1-five_prime_utr-chr04:12988663..12989283	five_prime_UTR

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
PI0020468.1-exon	PI0020468.1-exon-chr04:12988663..12989462	exon
PI0020468.1-exon	PI0020468.1-exon-chr04:12989777..12989832	exon
PI0020468.1-exon	PI0020468.1-exon-chr04:12990397..12990455	exon
PI0020468.1-exon	PI0020468.1-exon-chr04:12990573..12990644	exon
PI0020468.1-exon	PI0020468.1-exon-chr04:12990765..12990848	exon
PI0020468.1-exon	PI0020468.1-exon-chr04:12991096..12991203	exon
PI0020468.1-exon	PI0020468.1-exon-chr04:12991337..12991399	exon
PI0020468.1-exon	PI0020468.1-exon-chr04:12993759..12993839	exon
PI0020468.1-exon	PI0020468.1-exon-chr04:12994523..12994750	exon
PI0020468.1-exon	PI0020468.1-exon-chr04:12995722..12995799	exon
PI0020468.1-exon	PI0020468.1-exon-chr04:12996465..12996503	exon
PI0020468.1-exon	PI0020468.1-exon-chr04:12996704..12996786	exon
PI0020468.1-exon	PI0020468.1-exon-chr04:12996895..12996967	exon
PI0020468.1-exon	PI0020468.1-exon-chr04:12997098..12997493	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
PI0020468.1-cds	PI0020468.1-cds-chr04:12989284..12989462	CDS
PI0020468.1-cds	PI0020468.1-cds-chr04:12989777..12989832	CDS
PI0020468.1-cds	PI0020468.1-cds-chr04:12990397..12990455	CDS
PI0020468.1-cds	PI0020468.1-cds-chr04:12990573..12990644	CDS
PI0020468.1-cds	PI0020468.1-cds-chr04:12990765..12990848	CDS
PI0020468.1-cds	PI0020468.1-cds-chr04:12991096..12991203	CDS
PI0020468.1-cds	PI0020468.1-cds-chr04:12991337..12991399	CDS
PI0020468.1-cds	PI0020468.1-cds-chr04:12993759..12993839	CDS
PI0020468.1-cds	PI0020468.1-cds-chr04:12994523..12994750	CDS
PI0020468.1-cds	PI0020468.1-cds-chr04:12995722..12995799	CDS
PI0020468.1-cds	PI0020468.1-cds-chr04:12996465..12996503	CDS
PI0020468.1-cds	PI0020468.1-cds-chr04:12996704..12996786	CDS
PI0020468.1-cds	PI0020468.1-cds-chr04:12996895..12996967	CDS
PI0020468.1-cds	PI0020468.1-cds-chr04:12997098..12997289	CDS

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
PI0020468.1-three_prime_utr	PI0020468.1-three_prime_utr-chr04:12997290..12997493	three_prime_UTR

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
PI0020468.1	PI0020468.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006281	DNA repair
biological_process	GO:0000725	recombinational repair
cellular_component	GO:0009536	plastid
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0008094	ATP-dependent activity, acting on DNA
molecular_function	GO:0003684	damaged DNA binding
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0004386	helicase activity
molecular_function	GO:0016787	hydrolase activity
molecular_function	GO:0046872	metal ion binding