PI0020373.1 (mRNA) Melon (PI 482460) v1

Overview


Name	PI0020373.1
Type	mRNA
Organism	Cucumis metuliferus (Melon (PI 482460) v1)
Description	Unknown protein
Location	chr11: 11739950 .. 11740486 (+)
Sequence length	537
RNA-Seq Expression	PI0020373.1
Synteny	PI0020373.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCAAAGGGCTTCGGAGGCCTCAAGCAAAGCCAATCAACGAAACCCAAAAGTGAAAAGGTTGAAGTCCATCCCTACCTTGCTCGAAACAATCTACTGCCACTCCAGATGTAGCATCTGTCAATGGTTTGAAAAGGGAAAGTCCGAGCAGCAAGGGGAAGTCCAATCGGCAAGACTTAAAGACCAGCTATGCAACGAACGAACAAAGGGAATGCAAAGGGCTTCGGAGGCCTCAAGCGAAGCCAGTCAACGAAACCCAAAAGTGAAAAAGTTGAATCCATCCCCACTTTGCTCGGAACAATCCACTACCACTCCAGATGTAGCATCTGTCAATGGTCTGAAAAGGGAAAGTCCGAGCGACAAGGGGAAGTCCAAGCGACAAGGGGAAGTCCGAACGGTAAGGGAAGTCCGAGCGACAAGGGAAAGTCCAATCGACAAGACTAGAAGACCAACCATGCAACAAATGAACGGGGGGAATGCAAAGGGCTTCGGAGGCCTCAAGCGAAGCCAGTCAACGAAACCCAAAAGTGGACGGTGA

mRNA sequence

ATGCAAAGGGCTTCGGAGGCCTCAAGCAAAGCCAATCAACGAAACCCAAAAGTGAAAAGGTTGAAGTCCATCCCTACCTTGCTCGAAACAATCTACTGCCACTCCAGATGTAGCATCTGTCAATGGTTTGAAAAGGGAAAGTCCGAGCAGCAAGGGGAAGTCCAATCGGCAAGACTTAAAGACCAGCTATGCAACGAACGAACAAAGGGAATGCAAAGGGCTTCGGAGGCCTCAAGCGAAGCCAGTCAACGAAACCCAAAAGTGAAAAAGTTGAATCCATCCCCACTTTGCTCGGAACAATCCACTACCACTCCAGATGTAGCATCTGTCAATGGTCTGAAAAGGGAAAGTCCGAGCGACAAGGGGAAGTCCAAGCGACAAGGGGAAGTCCGAACGGTAAGGGAAGTCCGAGCGACAAGGGAAAGTCCAATCGACAAGACTAGAAGACCAACCATGCAACAAATGAACGGGGGGAATGCAAAGGGCTTCGGAGGCCTCAAGCGAAGCCAGTCAACGAAACCCAAAAGTGGACGGTGA

Coding sequence (CDS)

ATGCAAAGGGCTTCGGAGGCCTCAAGCAAAGCCAATCAACGAAACCCAAAAGTGAAAAGGTTGAAGTCCATCCCTACCTTGCTCGAAACAATCTACTGCCACTCCAGATGTAGCATCTGTCAATGGTTTGAAAAGGGAAAGTCCGAGCAGCAAGGGGAAGTCCAATCGGCAAGACTTAAAGACCAGCTATGCAACGAACGAACAAAGGGAATGCAAAGGGCTTCGGAGGCCTCAAGCGAAGCCAGTCAACGAAACCCAAAAGTGAAAAAGTTGAATCCATCCCCACTTTGCTCGGAACAATCCACTACCACTCCAGATGTAGCATCTGTCAATGGTCTGAAAAGGGAAAGTCCGAGCGACAAGGGGAAGTCCAAGCGACAAGGGGAAGTCCGAACGGTAAGGGAAGTCCGAGCGACAAGGGAAAGTCCAATCGACAAGACTAGAAGACCAACCATGCAACAAATGAACGGGGGGAATGCAAAGGGCTTCGGAGGCCTCAAGCGAAGCCAGTCAACGAAACCCAAAAGTGGACGGTGA

Protein sequence

MQRASEASSKANQRNPKVKRLKSIPTLLETIYCHSRCSICQWFEKGKSEQQGEVQSARLKDQLCNERTKGMQRASEASSEASQRNPKVKKLNPSPLCSEQSTTTPDVASVNGLKRESPSDKGKSKRQGEVRTVREVRATRESPIDKTRRPTMQQMNGGNAKGFGGLKRSQSTKPKSGR

Homology

The following BLAST results are available for this feature:

BLAST of PI0020373.1 vs.


Match Name	E-value	Identity	Description

BLAST of PI0020373.1 vs.


Match Name	E-value	Identity	Description

BLAST of PI0020373.1 vs.


Match Name	E-value	Identity	Description

BLAST of PI0020373.1 vs.


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..21
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 48..178
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 68..110
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 116..147

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
PI0020373	PI0020373	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
PI0020373.1-exon	PI0020373.1-exon-chr11:11739950..11740486	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
PI0020373.1-cds	PI0020373.1-cds-chr11:11739950..11740486	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
PI0020373.1	PI0020373.1-protein	polypeptide