PI0019623.1 (mRNA) Melon (PI 482460) v1

Overview


Name	PI0019623.1
Type	mRNA
Organism	Cucumis metuliferus (Melon (PI 482460) v1)
Description	Unknown protein
Location	chr08: 6546076 .. 6546837 (+)
Sequence length	432
RNA-Seq Expression	PI0019623.1
Synteny	PI0019623.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGACTGATAGCGGAAGCAGAGACTACGCTTATGACCATCACGTGACCCTCCTGCCCCTCGCCGGTCTGCCGCTCATCTTAACTTTGCCTGTAAAAGTTAAACATGGAAAGGGTGAGCATACACAAATACTCAGTAAGGGGGAATCTACAATCAAGCTAGGGTTGAACAGTTATCTTCCTATGGGTATCCTGCAGAAATATCAGTCATACTATCCAAAATAGTCATCAGGAAACAGAGCTTCAAACAGTCATGCTTGATAACACTAAAACCATAATCACGGATAAGCATACTACATGGTTTCATGGGAATATCTCATTCATAGCAATCGGCCCAACATAACAGAATTTAGATTCCTATCACGGTCTCTTATAAACATTCCATATCCCAACGCATTTCTCATTCGCTAAAACGGTAGAGAAACCCCTTACCTTGGATGCTAAGTCCAAGATGCATTACGCGGCCAGAAGAGATCCAAGACACGAGAAGATGAGCTCCAAATGCTTACTCCTCGGCGAACAACAACACTACGCGGCAAGGCCAACAGTGAGGCGAAAAGACTTAGACCCAAGAATTCGAAGAAGAACCAAAACCAAACCGCAACAGTGAAGACTTACCTTGCAATCAAGGGAGCTCGCGAAAAGAAGAGGCGAGCAAAGACCTCAGAACGCTGCGAGACACCTCAGCCCGCGACAAGGGCAACTCGGCGAAACGCGAGGCCGAACGCGGACCACAGCTGGCGGCAAGGGAAGCTCGCGAACTAA

mRNA sequence

ATGACTGATAGCGGAAGCAGAGACTACGCTTATGACCATCACGTGACCCTCCTGCCCCTCGCCGGTCTGCCGCTCATCTTAACTTTGCCTGTAAAAGTTAAACATGGAAAGGTCCAAGATGCATTACGCGGCCAGAAGAGATCCAAGACACGAGAAGATGAGCTCCAAATGCTTACTCCTCGGCGAACAACAACACTACGCGGCAAGGCCAACAGTGAGGCGAAAAGACTTAGACCCAAGAATTCGAAGAAGAACCAAAACCAAACCGCAACAGTGAAGACTTACCTTGCAATCAAGGGAGCTCGCGAAAAGAAGAGGCGAGCAAAGACCTCAGAACGCTGCGAGACACCTCAGCCCGCGACAAGGGCAACTCGGCGAAACGCGAGGCCGAACGCGGACCACAGCTGGCGGCAAGGGAAGCTCGCGAACTAA

Coding sequence (CDS)

ATGACTGATAGCGGAAGCAGAGACTACGCTTATGACCATCACGTGACCCTCCTGCCCCTCGCCGGTCTGCCGCTCATCTTAACTTTGCCTGTAAAAGTTAAACATGGAAAGGTCCAAGATGCATTACGCGGCCAGAAGAGATCCAAGACACGAGAAGATGAGCTCCAAATGCTTACTCCTCGGCGAACAACAACACTACGCGGCAAGGCCAACAGTGAGGCGAAAAGACTTAGACCCAAGAATTCGAAGAAGAACCAAAACCAAACCGCAACAGTGAAGACTTACCTTGCAATCAAGGGAGCTCGCGAAAAGAAGAGGCGAGCAAAGACCTCAGAACGCTGCGAGACACCTCAGCCCGCGACAAGGGCAACTCGGCGAAACGCGAGGCCGAACGCGGACCACAGCTGGCGGCAAGGGAAGCTCGCGAACTAA

Protein sequence

MTDSGSRDYAYDHHVTLLPLAGLPLILTLPVKVKHGKVQDALRGQKRSKTREDELQMLTPRRTTTLRGKANSEAKRLRPKNSKKNQNQTATVKTYLAIKGAREKKRRAKTSERCETPQPATRATRRNARPNADHSWRQGKLAN

Homology

The following BLAST results are available for this feature:

BLAST of PI0019623.1 vs.


Match Name	E-value	Identity	Description

BLAST of PI0019623.1 vs.


Match Name	E-value	Identity	Description

BLAST of PI0019623.1 vs.


Match Name	E-value	Identity	Description

BLAST of PI0019623.1 vs.


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 98..113
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 38..143
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 38..58

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
PI0019623	PI0019623	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
PI0019623.1-exon	PI0019623.1-exon-chr08:6546076..6546187	exon
PI0019623.1-exon	PI0019623.1-exon-chr08:6546518..6546837	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
PI0019623.1-cds	PI0019623.1-cds-chr08:6546076..6546187	CDS
PI0019623.1-cds	PI0019623.1-cds-chr08:6546518..6546837	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
PI0019623.1	PI0019623.1-protein	polypeptide