PI0018472.1 (mRNA) Melon (PI 482460) v1

Overview


Name	PI0018472.1
Type	mRNA
Organism	Cucumis metuliferus (Melon (PI 482460) v1)
Description	Unknown protein
Location	chr07: 8699869 .. 8700663 (+)
Sequence length	468
RNA-Seq Expression	PI0018472.1
Synteny	PI0018472.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCGTTTCTCATTCGCTAAAACGGTAGAGAAACCCCTTACCTCGGATGTGCTAAGTCAAAGTGCACTATGCAACAAGGAAAGTCCAAAACGCGAGAAGGGTGAGCTCTAATTGCTTACTCCTCGGCGAAATCACGAGGCTACGCGGCAAGGCTAACTACAAGGCGAAACAACCAACGTCCTAAGGTGCGAAATAGAAAAATTCCAAGTCAAAACAGGTCAAAGCTTACCTCAAACAGTCCAATGGAGCTCACGGCAAGGAGAGGCGGGTAAAGGGCCTCAGAACGCGGCGAGACCCCTCAGCTCGCGGCAAGGGAGACTCGCGAAACTCAAAGGTAGCTCGCGGACAACGGGGCTGGCAGCAAGGGACACTCGGGAAAAGAGAACCTCAGCTCACGGGCAAGGTTCTTTAGCTTGCGAACAAAGGAGCTGTCACCGAACAAGGGGGTTACTTCGCGGGGTAGCAAAGGAAAACGAAGCAGAACGCGAAGGAAAAAAATAGGCGAGAAGAAGAAGGGTTTTCGTTGAACTTACCTACGAAGAACACTTCTCGGAATGACACTCGGCGAACGAAGACTTTACACCACGCTAACTTGCTCTGCGAACCACTGCAGGCAACACAAGTAGGCGGCAAGGTCTCCGACGGTATGGGCAGGCGGAGAAGAGGTTCCGGACGGTGAGGCAACGCGCAGCTCTAGGTTTTCTGGAGAGAACGATGCTCGGGAAGCTACACGCGAAGAAGAGAAGAATTGAGGGCTGGGGGAAGGCAGAAACACGGAAGAAGGGAAGGGTTTAA

mRNA sequence

ATGCGTTTCTCATTCGCTAAAACGGTAGAGAAACCCCTTACCTCGGATGTGCTAAGTCAAAGTGCACTATGCAACAAGGAAAGTCCAAAACGCGAGAAGGGTCAAAGCTTACCTCAAACAGTCCAATGGAGCTCACGGCAAGGAGAGGCGGGTAAAGGGCCTCAGAACGCGGCGAGACCCCTCAGCTCGCGGCAAGGGAGACTCGCGAAACTCAAAGGTAGCTCGCGGACAACGGGGCTGGCAGCAAGGGACACTCGGGAAAAGAGAACCTCAGCTCACGGGCAAGGCAACACAAGTAGGCGGCAAGGTCTCCGACGGTATGGGCAGGCGGAGAAGAGGTTCCGGACGGTGAGGCAACGCGCAGCTCTAGGTTTTCTGGAGAGAACGATGCTCGGGAAGCTACACGCGAAGAAGAGAAGAATTGAGGGCTGGGGGAAGGCAGAAACACGGAAGAAGGGAAGGGTTTAA

Coding sequence (CDS)

ATGCGTTTCTCATTCGCTAAAACGGTAGAGAAACCCCTTACCTCGGATGTGCTAAGTCAAAGTGCACTATGCAACAAGGAAAGTCCAAAACGCGAGAAGGGTCAAAGCTTACCTCAAACAGTCCAATGGAGCTCACGGCAAGGAGAGGCGGGTAAAGGGCCTCAGAACGCGGCGAGACCCCTCAGCTCGCGGCAAGGGAGACTCGCGAAACTCAAAGGTAGCTCGCGGACAACGGGGCTGGCAGCAAGGGACACTCGGGAAAAGAGAACCTCAGCTCACGGGCAAGGCAACACAAGTAGGCGGCAAGGTCTCCGACGGTATGGGCAGGCGGAGAAGAGGTTCCGGACGGTGAGGCAACGCGCAGCTCTAGGTTTTCTGGAGAGAACGATGCTCGGGAAGCTACACGCGAAGAAGAGAAGAATTGAGGGCTGGGGGAAGGCAGAAACACGGAAGAAGGGAAGGGTTTAA

Protein sequence

MRFSFAKTVEKPLTSDVLSQSALCNKESPKREKGQSLPQTVQWSSRQGEAGKGPQNAARPLSSRQGRLAKLKGSSRTTGLAARDTREKRTSAHGQGNTSRRQGLRRYGQAEKRFRTVRQRAALGFLERTMLGKLHAKKRRIEGWGKAETRKKGRV

Homology

The following BLAST results are available for this feature:

BLAST of PI0018472.1 vs.


Match Name	E-value	Identity	Description

BLAST of PI0018472.1 vs.


Match Name	E-value	Identity	Description

BLAST of PI0018472.1 vs.


Match Name	E-value	Identity	Description

BLAST of PI0018472.1 vs.


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 34..51
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 58..72
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..111

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
PI0018472	PI0018472	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
PI0018472.1-exon	PI0018472.1-exon-chr07:8699869..8699968	exon
PI0018472.1-exon	PI0018472.1-exon-chr07:8700086..8700271	exon
PI0018472.1-exon	PI0018472.1-exon-chr07:8700482..8700663	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
PI0018472.1-cds	PI0018472.1-cds-chr07:8699869..8699968	CDS
PI0018472.1-cds	PI0018472.1-cds-chr07:8700086..8700271	CDS
PI0018472.1-cds	PI0018472.1-cds-chr07:8700482..8700663	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
PI0018472.1	PI0018472.1-protein	polypeptide