PI0018005.1 (mRNA) Melon (PI 482460) v1

Overview


Name	PI0018005.1
Type	mRNA
Organism	Cucumis metuliferus (Melon (PI 482460) v1)
Description	Integrase-type DNA-binding superfamily protein
Location	chr01: 27831807 .. 27832408 (+)
Sequence length	537
RNA-Seq Expression	PI0018005.1
Synteny	PI0018005.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCAAAACCAAAGAATTCAAATCCCCAGAACAAAACCACCCCTCTTCCCACTACTCCGGCCGGTAAAAGACCAAGAGACTGCAACAAACACCCTGTTTTCCGAGGCGTACGGAAGCGGAGCTGGGGGAAATGGGTATCTGAAATCCGGCAACCCCGTAAGAATTCCCGAATTTGGCTCGGCACTTTCCGACTCCGGAGATGGCGGCACGTGCTCACGACGCGGCAGCTTTATGCATCAAAGGCGACTCTGCCATCCTCAATTACCCTGAACTTGCAGAGTTTTTGCCTCGGCCGGCGTCGCTCATGCCGCAGGATGTTCAGGCTGCCGCCGCCAAAGCTGCAGCGATGGTCCATTTGAATTCCGCTGCATTGCCGTCGGAGGAGGAGGAGCTGAGTGAGATCGTCGAGTTGCCGAATATCGAAGACGATTTTGGTACTGAGTCGTTGAATGAGTTCAAATTGGTTACTGAGTCATGGGAATGGTGGGAGTCCGTGGCAATGCCGTTGGCGGCGGAATTCGGCTACGGTTATTTTTCCGACCAAACGACGGCGGAGGAAAGTTGTTACTCGAGCAGTTTTTACGGCGTTCTTTGGGATTAA

mRNA sequence

ATGGCAAAACCAAAGAATTCAAATCCCCAGAACAAAACCACCCCTCTTCCCACTACTCCGGCCGGTAAAAGACCAAGAGACTGCAACAAACACCCTGTTTTCCGAGGCGTACGGAAGCGGAGCTGGGGGAAATGGATGGCGGCACGTGCTCACGACGCGGCAGCTTTATGCATCAAAGGCGACTCTGCCATCCTCAATTACCCTGAACTTGCAGAGTTTTTGCCTCGGCCGGCGTCGCTCATGCCGCAGGATGTTCAGGCTGCCGCCGCCAAAGCTGCAGCGATGGTCCATTTGAATTCCGCTGCATTGCCGTCGGAGGAGGAGGAGCTGAGTGAGATCGTCGAGTTGCCGAATATCGAAGACGATTTTGGTACTGAGTCGTTGAATGAGTTCAAATTGGTTACTGAGTCATGGGAATGGTGGGAGTCCGTGGCAATGCCGTTGGCGGCGGAATTCGGCTACGGTTATTTTTCCGACCAAACGACGGCGGAGGAAAGTTGTTACTCGAGCAGTTTTTACGGCGTTCTTTGGGATTAA

Coding sequence (CDS)

ATGGCAAAACCAAAGAATTCAAATCCCCAGAACAAAACCACCCCTCTTCCCACTACTCCGGCCGGTAAAAGACCAAGAGACTGCAACAAACACCCTGTTTTCCGAGGCGTACGGAAGCGGAGCTGGGGGAAATGGATGGCGGCACGTGCTCACGACGCGGCAGCTTTATGCATCAAAGGCGACTCTGCCATCCTCAATTACCCTGAACTTGCAGAGTTTTTGCCTCGGCCGGCGTCGCTCATGCCGCAGGATGTTCAGGCTGCCGCCGCCAAAGCTGCAGCGATGGTCCATTTGAATTCCGCTGCATTGCCGTCGGAGGAGGAGGAGCTGAGTGAGATCGTCGAGTTGCCGAATATCGAAGACGATTTTGGTACTGAGTCGTTGAATGAGTTCAAATTGGTTACTGAGTCATGGGAATGGTGGGAGTCCGTGGCAATGCCGTTGGCGGCGGAATTCGGCTACGGTTATTTTTCCGACCAAACGACGGCGGAGGAAAGTTGTTACTCGAGCAGTTTTTACGGCGTTCTTTGGGATTAA

Protein sequence

MAKPKNSNPQNKTTPLPTTPAGKRPRDCNKHPVFRGVRKRSWGKWMAARAHDAAALCIKGDSAILNYPELAEFLPRPASLMPQDVQAAAAKAAAMVHLNSAALPSEEEELSEIVELPNIEDDFGTESLNEFKLVTESWEWWESVAMPLAAEFGYGYFSDQTTAEESCYSSSFYGVLWD

Homology

[Close]

BLAST of PI0018005.1 vs. ExPASy Swiss-Prot
Match: Q9LYD3 (Dehydration-responsive element-binding protein 3 OS=Arabidopsis thaliana OX=3702 GN=DREB3 PE=2 SV=1)

HSP 1 Score: 102.4 bits (254), Expect = 5.2e-21
Identity = 67/153 (43.79%), Postives = 81/153 (52.94%), Query Frame = 0


Query: 23  KRPRDCNKHPVFRGVRKRSWGKW----------------------MAARAHDAAALCIKG 82
           KR RD  KHPV+RGVR R+WGKW                      MAARAHD AAL IKG
Sbjct: 40  KRGRDSGKHPVYRGVRMRNWGKWVSEIREPRKKSRIWLGTFPTPEMAARAHDVAALSIKG 99

Query: 83  DSAILNYPELAEFLPRPASLMPQDVQAAAAKAAAMVHL--------NSAALPS------- 130
            +AILN+PELA+  PRP SL P+D+Q AA KAA M           +S++L S       
Sbjct: 100 TAAILNFPELADSFPRPVSLSPRDIQTAALKAAHMEPTTSFSSSTSSSSSLSSTSSLESL 159

[Close]

BLAST of PI0018005.1 vs. ExPASy Swiss-Prot
Match: Q9LU18 (Ethylene-responsive transcription factor ERF036 OS=Arabidopsis thaliana OX=3702 GN=ERF036 PE=2 SV=2)

HSP 1 Score: 100.5 bits (249), Expect = 2.0e-20
Identity = 69/168 (41.07%), Postives = 85/168 (50.60%), Query Frame = 0


Query: 2   AKPKNSNPQNKTTPLPTTPAGKRPRDCNKHPVFRGVRKRSWGKW---------------- 61
           A P+N+N + +     +  +        +HPV+RGVR RSWGKW                
Sbjct: 33  APPRNNNTRKRRRDSSSASSS----SSMQHPVYRGVRMRSWGKWVSEIRQPRKKTRIWLG 92

Query: 62  ------MAARAHDAAALCIKGDSAILNYPELAEFLPRPASLMPQDVQAAAAKAAAMVHLN 121
                 MAARAHD AAL IKG SA+LN+PELA   PRPAS  P D+Q AAA+AAAMV   
Sbjct: 93  TFVTADMAARAHDVAALTIKGSSAVLNFPELASLFPRPASSSPHDIQTAAAEAAAMVVEE 152

Query: 122 S-------------------AALPSEEEELSEIVELPNIEDDFGTESL 129
                               AA   +EE L +IVELPNIE+    ES+
Sbjct: 153 KLLEKDEAPEAPPSSESSYVAAESEDEERLEKIVELPNIEEGSYDESV 196

[Close]

BLAST of PI0018005.1 vs. ExPASy Swiss-Prot
Match: O80654 (Ethylene-responsive transcription factor ERF037 OS=Arabidopsis thaliana OX=3702 GN=ERF037 PE=1 SV=1)

HSP 1 Score: 97.8 bits (242), Expect = 1.3e-19
Identity = 71/166 (42.77%), Postives = 85/166 (51.20%), Query Frame = 0


Query: 32  PVFRGVRKRSWGKW----------------------MAARAHDAAALCIKGDSAILNYPE 91
           P +RGVR R+WGKW                      MAARAHDAAAL IKG SA+LN+PE
Sbjct: 41  PGYRGVRMRTWGKWVSEIREPRKKSRIWLGTFSTPEMAARAHDAAALTIKGTSAVLNFPE 100

Query: 92  LAEFLPRPASLMPQDVQAAAAKAAAM-------------------------------VHL 139
           LA +LPRPAS  P+DVQAAAA AAAM                                  
Sbjct: 101 LATYLPRPASSSPRDVQAAAAVAAAMDFSPSSSSLVVSDPTTVIAPAETQLSSSSYSTCT 160

[Close]

BLAST of PI0018005.1 vs. ExPASy Swiss-Prot
Match: Q39127 (Ethylene-responsive transcription factor TINY OS=Arabidopsis thaliana OX=3702 GN=TINY PE=2 SV=1)

HSP 1 Score: 97.8 bits (242), Expect = 1.3e-19
Identity = 69/166 (41.57%), Postives = 87/166 (52.41%), Query Frame = 0


Query: 23  KRP-RDCNKHPVFRGVRKRSWGKW----------------------MAARAHDAAALCIK 82
           K+P +D  KHPV+RGVRKR+WGKW                      MAARAHD AAL IK
Sbjct: 24  KKPVKDSGKHPVYRGVRKRNWGKWVSEIREPRKKSRIWLGTFPSPEMAARAHDVAALSIK 83

Query: 83  GDSAILNYPELAEFLPRPASLMPQDVQAAAAKAAAMVHLNSAALPSE------------- 142
           G SAILN+P+LA   PRP+SL P+D+Q AA KAA M    S +  S              
Sbjct: 84  GASAILNFPDLAGSFPRPSSLSPRDIQVAALKAAHMETSQSFSSSSSLTFSSSQSSSSLE 143

[Close]

BLAST of PI0018005.1 vs. ExPASy Swiss-Prot
Match: Q9M080 (Ethylene-responsive transcription factor ERF043 OS=Arabidopsis thaliana OX=3702 GN=ERF043 PE=2 SV=1)

HSP 1 Score: 90.9 bits (224), Expect = 1.6e-17
Identity = 53/108 (49.07%), Postives = 65/108 (60.19%), Query Frame = 0


Query: 23  KRPRDCNKHPVFRGVRKRSWGKW----------------------MAARAHDAAALCIKG 82
           K  ++ NK PV+RGVR RSWGKW                      MA RAHD AA+ IKG
Sbjct: 8   KEKKENNKQPVYRGVRMRSWGKWVSEIREPRKKSRIWLGTFPTAEMAMRAHDVAAMSIKG 67

Query: 83  DSAILNYPELAEFLPRPASLMPQDVQAAAAKAAAMVHLNSAALPSEEE 109
            SAILN+PEL++ LPRP SL P+DV+AAA KAA M   ++ A  S+ E
Sbjct: 68  TSAILNFPELSKLLPRPVSLSPRDVRAAATKAALM-DFDTTAFRSDTE 114

[Close]

BLAST of PI0018005.1 vs. ExPASy TrEMBL
Match: A0A5D3BW76 (Dehydration-responsive element-binding protein 3-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold347G002010 PE=4 SV=1)

HSP 1 Score: 337.4 bits (864), Expect = 3.6e-89
Identity = 174/201 (86.57%), Postives = 176/201 (87.56%), Query Frame = 0


Query: 1   MAKPKNSNPQNKTTPLPTT-PAGKRPRDCNKHPVFRGVRKRSWGKW-------------- 60
           MAKPKNSNPQNKTTPLPTT PAGKRPRDCNKHPVFRGVRKRSWGKW              
Sbjct: 1   MAKPKNSNPQNKTTPLPTTRPAGKRPRDCNKHPVFRGVRKRSWGKWVSEIRQPRKNSRIW 60

Query: 61  --------MAARAHDAAALCIKGDSAILNYPELAEFLPRPASLMPQDVQAAAAKAAAMVH 120
                   MAARAHDAAALCIKGDSAILNYPELA+FLPRPASLMPQDVQAAAAKAAAMVH
Sbjct: 61  LGTFPTPEMAARAHDAAALCIKGDSAILNYPELADFLPRPASLMPQDVQAAAAKAAAMVH 120

Query: 121 LNSAALPSEEEELSEIVELPNIEDDFGTESLNEFKLVTESWEWWESVAMPLAAEFGYGYF 179
           LNSAALPSEEEELSEIVELPNIEDDFGTESLNEFKLVTESWEWWESVAMPLAAEFGYGYF
Sbjct: 121 LNSAALPSEEEELSEIVELPNIEDDFGTESLNEFKLVTESWEWWESVAMPLAAEFGYGYF 180

[Close]

BLAST of PI0018005.1 vs. ExPASy TrEMBL
Match: A0A1S3CGW5 (dehydration-responsive element-binding protein 3-like OS=Cucumis melo OX=3656 GN=LOC103500606 PE=4 SV=1)

HSP 1 Score: 337.4 bits (864), Expect = 3.6e-89
Identity = 174/201 (86.57%), Postives = 176/201 (87.56%), Query Frame = 0


Query: 1   MAKPKNSNPQNKTTPLPTT-PAGKRPRDCNKHPVFRGVRKRSWGKW-------------- 60
           MAKPKNSNPQNKTTPLPTT PAGKRPRDCNKHPVFRGVRKRSWGKW              
Sbjct: 1   MAKPKNSNPQNKTTPLPTTRPAGKRPRDCNKHPVFRGVRKRSWGKWVSEIRQPRKNSRIW 60

Query: 61  --------MAARAHDAAALCIKGDSAILNYPELAEFLPRPASLMPQDVQAAAAKAAAMVH 120
                   MAARAHDAAALCIKGDSAILNYPELA+FLPRPASLMPQDVQAAAAKAAAMVH
Sbjct: 61  LGTFPTPEMAARAHDAAALCIKGDSAILNYPELADFLPRPASLMPQDVQAAAAKAAAMVH 120

Query: 121 LNSAALPSEEEELSEIVELPNIEDDFGTESLNEFKLVTESWEWWESVAMPLAAEFGYGYF 179
           LNSAALPSEEEELSEIVELPNIEDDFGTESLNEFKLVTESWEWWESVAMPLAAEFGYGYF
Sbjct: 121 LNSAALPSEEEELSEIVELPNIEDDFGTESLNEFKLVTESWEWWESVAMPLAAEFGYGYF 180

[Close]

BLAST of PI0018005.1 vs. ExPASy TrEMBL
Match: A0A0A0K6P8 (AP2/ERF domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G447150 PE=4 SV=1)

HSP 1 Score: 319.3 bits (817), Expect = 1.0e-83
Identity = 168/201 (83.58%), Postives = 169/201 (84.08%), Query Frame = 0


Query: 1   MAKPKNSNPQNKTT-PLPTTPAGKRPRDCNKHPVFRGVRKRSWGKW-------------- 60
           MAKPKNSNPQNKTT  LPTTPA KRPRDCNKHPVFRGVRKRSWGKW              
Sbjct: 1   MAKPKNSNPQNKTTSSLPTTPASKRPRDCNKHPVFRGVRKRSWGKWVSEIRQPRKNSRIW 60

Query: 61  --------MAARAHDAAALCIKGDSAILNYPELAEFLPRPASLMPQDVQAAAAKAAAMVH 120
                   MAARAHDAAALCIKGDSAILNYPELA+ LPRPASLMPQDVQAAAAKAAAMVH
Sbjct: 61  LGTFPTPEMAARAHDAAALCIKGDSAILNYPELADILPRPASLMPQDVQAAAAKAAAMVH 120

Query: 121 LNSAALPSEEEELSEIVELPNIEDDFGTESLNEFKLVTESWEWWESVAMPLAAEFGYGYF 179
           LNSA LPSEEEELSEIVELPNIEDDF TESLNEFKLVTESWEWWESVAMPLAAEFG GYF
Sbjct: 121 LNSAGLPSEEEELSEIVELPNIEDDFCTESLNEFKLVTESWEWWESVAMPLAAEFGSGYF 180

[Close]

BLAST of PI0018005.1 vs. ExPASy TrEMBL
Match: A0A6J1HGN7 (ethylene-responsive transcription factor TINY-like OS=Cucurbita moschata OX=3662 GN=LOC111464158 PE=4 SV=1)

HSP 1 Score: 250.4 bits (638), Expect = 5.7e-63
Identity = 142/216 (65.74%), Postives = 149/216 (68.98%), Query Frame = 0


Query: 1   MAKPKNSNPQN---------KTTPL-------PTTPAGKRPRDCNKHPVFRGVRKRSWGK 60
           MAKPK+S P            T P+       P  P  KR RDCN+HPVFRGVRKRSWGK
Sbjct: 1   MAKPKSSFPTTPPPLSSSFPSTRPVSGAGPAQPDPPPRKRTRDCNRHPVFRGVRKRSWGK 60

Query: 61  W----------------------MAARAHDAAALCIKGDSAILNYPELAEFLPRPASLMP 120
           W                      MAARAHDAAALCIKGDSAILNYPELA FLPRPASLMP
Sbjct: 61  WVSEIRQPRKKSRIWLGTFPTPEMAARAHDAAALCIKGDSAILNYPELASFLPRPASLMP 120

Query: 121 QDVQAAAAKAAAMVHLNSAALPSEEEELSEIVELPNIEDDFGTESLNEFKLVTESWEWWE 179
            D+QAAAAKAAAM    +   PSEEEELSEIVELPNIEDDFGTESLNEFKLVTESWEWWE
Sbjct: 121 HDIQAAAAKAAAMA--TALPSPSEEEELSEIVELPNIEDDFGTESLNEFKLVTESWEWWE 180

[Close]

BLAST of PI0018005.1 vs. ExPASy TrEMBL
Match: A0A6J1D072 (dehydration-responsive element-binding protein 3 OS=Momordica charantia OX=3673 GN=LOC111015808 PE=4 SV=1)

HSP 1 Score: 246.9 bits (629), Expect = 6.4e-62
Identity = 139/212 (65.57%), Postives = 152/212 (71.70%), Query Frame = 0


Query: 1   MAKPKNSNPQNKTTPL--------PTTPAGKRPRDCNKHPVFRGVRKRSWGKW------- 60
           MAKPKNS+PQ  T P         P  PA KR RDCN+HP+FRGVRKRSWGKW       
Sbjct: 1   MAKPKNSDPQ--TIPAVSGAGAVQPDRPAAKRARDCNRHPLFRGVRKRSWGKWVSEIRQP 60

Query: 61  ---------------MAARAHDAAALCIKGDSAILNYPELAEFLPRPASLMPQDVQAAAA 120
                          MAARAHDAAAL IKGDSAILNYPELA+FLPRPASL P D+QAAAA
Sbjct: 61  RKKSRIWLGTFPTPEMAARAHDAAALSIKGDSAILNYPELAQFLPRPASLTPHDIQAAAA 120

Query: 121 KAAAMVHLNSAA--LPSEEEELSEIVELPNIEDDFGTESLNEFKLVTESWEWWESVAMP- 179
           KAAAMV+  S +   PSEEEELSEIVELPNIEDDF TES +EF LVTESWEWWE VAMP 
Sbjct: 121 KAAAMVNFKSTSSPSPSEEEELSEIVELPNIEDDFATESQSEFALVTESWEWWECVAMPL 180

[Close]

BLAST of PI0018005.1 vs. NCBI nr
Match: XP_008462184.1 (PREDICTED: dehydration-responsive element-binding protein 3-like [Cucumis melo] >KAA0059324.1 dehydration-responsive element-binding protein 3-like [Cucumis melo var. makuwa] >TYK04003.1 dehydration-responsive element-binding protein 3-like [Cucumis melo var. makuwa])

HSP 1 Score: 337.4 bits (864), Expect = 7.4e-89
Identity = 174/201 (86.57%), Postives = 176/201 (87.56%), Query Frame = 0


Query: 1   MAKPKNSNPQNKTTPLPTT-PAGKRPRDCNKHPVFRGVRKRSWGKW-------------- 60
           MAKPKNSNPQNKTTPLPTT PAGKRPRDCNKHPVFRGVRKRSWGKW              
Sbjct: 1   MAKPKNSNPQNKTTPLPTTRPAGKRPRDCNKHPVFRGVRKRSWGKWVSEIRQPRKNSRIW 60

Query: 61  --------MAARAHDAAALCIKGDSAILNYPELAEFLPRPASLMPQDVQAAAAKAAAMVH 120
                   MAARAHDAAALCIKGDSAILNYPELA+FLPRPASLMPQDVQAAAAKAAAMVH
Sbjct: 61  LGTFPTPEMAARAHDAAALCIKGDSAILNYPELADFLPRPASLMPQDVQAAAAKAAAMVH 120

Query: 121 LNSAALPSEEEELSEIVELPNIEDDFGTESLNEFKLVTESWEWWESVAMPLAAEFGYGYF 179
           LNSAALPSEEEELSEIVELPNIEDDFGTESLNEFKLVTESWEWWESVAMPLAAEFGYGYF
Sbjct: 121 LNSAALPSEEEELSEIVELPNIEDDFGTESLNEFKLVTESWEWWESVAMPLAAEFGYGYF 180

[Close]

BLAST of PI0018005.1 vs. NCBI nr
Match: XP_004141836.1 (dehydration-responsive element-binding protein 3 [Cucumis sativus])

HSP 1 Score: 319.3 bits (817), Expect = 2.1e-83
Identity = 168/201 (83.58%), Postives = 169/201 (84.08%), Query Frame = 0


Query: 1   MAKPKNSNPQNKTT-PLPTTPAGKRPRDCNKHPVFRGVRKRSWGKW-------------- 60
           MAKPKNSNPQNKTT  LPTTPA KRPRDCNKHPVFRGVRKRSWGKW              
Sbjct: 1   MAKPKNSNPQNKTTSSLPTTPASKRPRDCNKHPVFRGVRKRSWGKWVSEIRQPRKNSRIW 60

Query: 61  --------MAARAHDAAALCIKGDSAILNYPELAEFLPRPASLMPQDVQAAAAKAAAMVH 120
                   MAARAHDAAALCIKGDSAILNYPELA+ LPRPASLMPQDVQAAAAKAAAMVH
Sbjct: 61  LGTFPTPEMAARAHDAAALCIKGDSAILNYPELADILPRPASLMPQDVQAAAAKAAAMVH 120

Query: 121 LNSAALPSEEEELSEIVELPNIEDDFGTESLNEFKLVTESWEWWESVAMPLAAEFGYGYF 179
           LNSA LPSEEEELSEIVELPNIEDDF TESLNEFKLVTESWEWWESVAMPLAAEFG GYF
Sbjct: 121 LNSAGLPSEEEELSEIVELPNIEDDFCTESLNEFKLVTESWEWWESVAMPLAAEFGSGYF 180

[Close]

BLAST of PI0018005.1 vs. NCBI nr
Match: XP_038899641.1 (dehydration-responsive element-binding protein 3-like [Benincasa hispida])

HSP 1 Score: 312.4 bits (799), Expect = 2.5e-81
Identity = 164/202 (81.19%), Postives = 168/202 (83.17%), Query Frame = 0


Query: 1   MAKPKNSNPQNKTTPLPTTPAGKRPRDCNKHPVFRGVRKRSWGKW--------------- 60
           MAKPKNSNPQNK  PLP TP GKRPRDCNKHPVFRGVRKRSWGKW               
Sbjct: 1   MAKPKNSNPQNKRNPLPLTPTGKRPRDCNKHPVFRGVRKRSWGKWVSEIRQPRKNSRIWL 60

Query: 61  -------MAARAHDAAALCIKGDSAILNYPELAEFLPRPASLMPQDVQAAAAKAAAMVHL 120
                  MAARAHDAAALCIKGDSAILNYPELAEFLPRPASLMP DVQAAAAKAAAMV+L
Sbjct: 61  GTFPTPEMAARAHDAAALCIKGDSAILNYPELAEFLPRPASLMPHDVQAAAAKAAAMVNL 120

Query: 121 NSAAL--PSEEEELSEIVELPNIEDDFGTESLNEFKLVTESWEWWESVAMPLAAEFGYGY 179
           NSAAL  PSEEEELSEIVELPNIEDDFGTESL +F+LV+ESWEWWESVAMPLAAEF  GY
Sbjct: 121 NSAALPSPSEEEELSEIVELPNIEDDFGTESLKDFRLVSESWEWWESVAMPLAAEFDCGY 180

[Close]

BLAST of PI0018005.1 vs. NCBI nr
Match: KAE8646475.1 (hypothetical protein Csa_016024 [Cucumis sativus])

HSP 1 Score: 277.7 bits (709), Expect = 6.9e-71
Identity = 148/178 (83.15%), Postives = 149/178 (83.71%), Query Frame = 0


Query: 1   MAKPKNSNPQNKTT-PLPTTPAGKRPRDCNKHPVFRGVRKRSWGKW-------------- 60
           MAKPKNSNPQNKTT  LPTTPA KRPRDCNKHPVFRGVRKRSWGKW              
Sbjct: 1   MAKPKNSNPQNKTTSSLPTTPASKRPRDCNKHPVFRGVRKRSWGKWVSEIRQPRKNSRIW 60

Query: 61  --------MAARAHDAAALCIKGDSAILNYPELAEFLPRPASLMPQDVQAAAAKAAAMVH 120
                   MAARAHDAAALCIKGDSAILNYPELA+ LPRPASLMPQDVQAAAAKAAAMVH
Sbjct: 61  LGTFPTPEMAARAHDAAALCIKGDSAILNYPELADILPRPASLMPQDVQAAAAKAAAMVH 120

Query: 121 LNSAALPSEEEELSEIVELPNIEDDFGTESLNEFKLVTESWEWWESVAMPLAAEFGYG 156
           LNSA LPSEEEELSEIVELPNIEDDF TESLNEFKLVTESWEWWESVAMPLAAEFG G
Sbjct: 121 LNSAGLPSEEEELSEIVELPNIEDDFCTESLNEFKLVTESWEWWESVAMPLAAEFGSG 178

[Close]

BLAST of PI0018005.1 vs. NCBI nr
Match: XP_022964007.1 (ethylene-responsive transcription factor TINY-like [Cucurbita moschata])

HSP 1 Score: 250.4 bits (638), Expect = 1.2e-62
Identity = 142/216 (65.74%), Postives = 149/216 (68.98%), Query Frame = 0


Query: 1   MAKPKNSNPQN---------KTTPL-------PTTPAGKRPRDCNKHPVFRGVRKRSWGK 60
           MAKPK+S P            T P+       P  P  KR RDCN+HPVFRGVRKRSWGK
Sbjct: 1   MAKPKSSFPTTPPPLSSSFPSTRPVSGAGPAQPDPPPRKRTRDCNRHPVFRGVRKRSWGK 60

Query: 61  W----------------------MAARAHDAAALCIKGDSAILNYPELAEFLPRPASLMP 120
           W                      MAARAHDAAALCIKGDSAILNYPELA FLPRPASLMP
Sbjct: 61  WVSEIRQPRKKSRIWLGTFPTPEMAARAHDAAALCIKGDSAILNYPELASFLPRPASLMP 120

Query: 121 QDVQAAAAKAAAMVHLNSAALPSEEEELSEIVELPNIEDDFGTESLNEFKLVTESWEWWE 179
            D+QAAAAKAAAM    +   PSEEEELSEIVELPNIEDDFGTESLNEFKLVTESWEWWE
Sbjct: 121 HDIQAAAAKAAAMA--TALPSPSEEEELSEIVELPNIEDDFGTESLNEFKLVTESWEWWE 180

[Close]

BLAST of PI0018005.1 vs. TAIR 10
Match: AT5G11590.1 (Integrase-type DNA-binding superfamily protein )

HSP 1 Score: 102.4 bits (254), Expect = 3.7e-22
Identity = 67/153 (43.79%), Postives = 81/153 (52.94%), Query Frame = 0


Query: 23  KRPRDCNKHPVFRGVRKRSWGKW----------------------MAARAHDAAALCIKG 82
           KR RD  KHPV+RGVR R+WGKW                      MAARAHD AAL IKG
Sbjct: 40  KRGRDSGKHPVYRGVRMRNWGKWVSEIREPRKKSRIWLGTFPTPEMAARAHDVAALSIKG 99

Query: 83  DSAILNYPELAEFLPRPASLMPQDVQAAAAKAAAMVHL--------NSAALPS------- 130
            +AILN+PELA+  PRP SL P+D+Q AA KAA M           +S++L S       
Sbjct: 100 TAAILNFPELADSFPRPVSLSPRDIQTAALKAAHMEPTTSFSSSTSSSSSLSSTSSLESL 159

[Close]

BLAST of PI0018005.1 vs. TAIR 10
Match: AT3G16280.1 (Integrase-type DNA-binding superfamily protein )

HSP 1 Score: 100.5 bits (249), Expect = 1.4e-21
Identity = 69/168 (41.07%), Postives = 85/168 (50.60%), Query Frame = 0


Query: 2   AKPKNSNPQNKTTPLPTTPAGKRPRDCNKHPVFRGVRKRSWGKW---------------- 61
           A P+N+N + +     +  +        +HPV+RGVR RSWGKW                
Sbjct: 33  APPRNNNTRKRRRDSSSASSS----SSMQHPVYRGVRMRSWGKWVSEIRQPRKKTRIWLG 92

Query: 62  ------MAARAHDAAALCIKGDSAILNYPELAEFLPRPASLMPQDVQAAAAKAAAMVHLN 121
                 MAARAHD AAL IKG SA+LN+PELA   PRPAS  P D+Q AAA+AAAMV   
Sbjct: 93  TFVTADMAARAHDVAALTIKGSSAVLNFPELASLFPRPASSSPHDIQTAAAEAAAMVVEE 152

Query: 122 S-------------------AALPSEEEELSEIVELPNIEDDFGTESL 129
                               AA   +EE L +IVELPNIE+    ES+
Sbjct: 153 KLLEKDEAPEAPPSSESSYVAAESEDEERLEKIVELPNIEEGSYDESV 196

[Close]

BLAST of PI0018005.1 vs. TAIR 10
Match: AT1G77200.1 (Integrase-type DNA-binding superfamily protein )

HSP 1 Score: 97.8 bits (242), Expect = 9.2e-21
Identity = 71/166 (42.77%), Postives = 85/166 (51.20%), Query Frame = 0


Query: 32  PVFRGVRKRSWGKW----------------------MAARAHDAAALCIKGDSAILNYPE 91
           P +RGVR R+WGKW                      MAARAHDAAAL IKG SA+LN+PE
Sbjct: 41  PGYRGVRMRTWGKWVSEIREPRKKSRIWLGTFSTPEMAARAHDAAALTIKGTSAVLNFPE 100

Query: 92  LAEFLPRPASLMPQDVQAAAAKAAAM-------------------------------VHL 139
           LA +LPRPAS  P+DVQAAAA AAAM                                  
Sbjct: 101 LATYLPRPASSSPRDVQAAAAVAAAMDFSPSSSSLVVSDPTTVIAPAETQLSSSSYSTCT 160

[Close]

BLAST of PI0018005.1 vs. TAIR 10
Match: AT5G25810.1 (Integrase-type DNA-binding superfamily protein )

HSP 1 Score: 97.8 bits (242), Expect = 9.2e-21
Identity = 69/166 (41.57%), Postives = 87/166 (52.41%), Query Frame = 0


Query: 23  KRP-RDCNKHPVFRGVRKRSWGKW----------------------MAARAHDAAALCIK 82
           K+P +D  KHPV+RGVRKR+WGKW                      MAARAHD AAL IK
Sbjct: 24  KKPVKDSGKHPVYRGVRKRNWGKWVSEIREPRKKSRIWLGTFPSPEMAARAHDVAALSIK 83

Query: 83  GDSAILNYPELAEFLPRPASLMPQDVQAAAAKAAAMVHLNSAALPSE------------- 142
           G SAILN+P+LA   PRP+SL P+D+Q AA KAA M    S +  S              
Sbjct: 84  GASAILNFPDLAGSFPRPSSLSPRDIQVAALKAAHMETSQSFSSSSSLTFSSSQSSSSLE 143

[Close]

BLAST of PI0018005.1 vs. TAIR 10
Match: AT4G32800.1 (Integrase-type DNA-binding superfamily protein )

HSP 1 Score: 90.9 bits (224), Expect = 1.1e-18
Identity = 53/108 (49.07%), Postives = 65/108 (60.19%), Query Frame = 0


Query: 23  KRPRDCNKHPVFRGVRKRSWGKW----------------------MAARAHDAAALCIKG 82
           K  ++ NK PV+RGVR RSWGKW                      MA RAHD AA+ IKG
Sbjct: 8   KEKKENNKQPVYRGVRMRSWGKWVSEIREPRKKSRIWLGTFPTAEMAMRAHDVAAMSIKG 67

Query: 83  DSAILNYPELAEFLPRPASLMPQDVQAAAAKAAAMVHLNSAALPSEEE 109
            SAILN+PEL++ LPRP SL P+DV+AAA KAA M   ++ A  S+ E
Sbjct: 68  TSAILNFPELSKLLPRPVSLSPRDVRAAATKAALM-DFDTTAFRSDTE 114

The following BLAST results are available for this feature:

BLAST of PI0018005.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LYD3	5.2e-21	43.79	Dehydration-responsive element-binding protein 3 OS=Arabidopsis thaliana OX=3702...	[more]
Q9LU18	2.0e-20	41.07	Ethylene-responsive transcription factor ERF036 OS=Arabidopsis thaliana OX=3702 ...	[more]
O80654	1.3e-19	42.77	Ethylene-responsive transcription factor ERF037 OS=Arabidopsis thaliana OX=3702 ...	[more]
Q39127	1.3e-19	41.57	Ethylene-responsive transcription factor TINY OS=Arabidopsis thaliana OX=3702 GN...	[more]
Q9M080	1.6e-17	49.07	Ethylene-responsive transcription factor ERF043 OS=Arabidopsis thaliana OX=3702 ...	[more]

BLAST of PI0018005.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3BW76	3.6e-89	86.57	Dehydration-responsive element-binding protein 3-like OS=Cucumis melo var. makuw...	[more]
A0A1S3CGW5	3.6e-89	86.57	dehydration-responsive element-binding protein 3-like OS=Cucumis melo OX=3656 GN...	[more]
A0A0A0K6P8	1.0e-83	83.58	AP2/ERF domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G447150 PE=...	[more]
A0A6J1HGN7	5.7e-63	65.74	ethylene-responsive transcription factor TINY-like OS=Cucurbita moschata OX=3662...	[more]
A0A6J1D072	6.4e-62	65.57	dehydration-responsive element-binding protein 3 OS=Momordica charantia OX=3673 ...	[more]

BLAST of PI0018005.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008462184.1	7.4e-89	86.57	PREDICTED: dehydration-responsive element-binding protein 3-like [Cucumis melo] ...	[more]
XP_004141836.1	2.1e-83	83.58	dehydration-responsive element-binding protein 3 [Cucumis sativus]	[more]
XP_038899641.1	2.5e-81	81.19	dehydration-responsive element-binding protein 3-like [Benincasa hispida]	[more]
KAE8646475.1	6.9e-71	83.15	hypothetical protein Csa_016024 [Cucumis sativus]	[more]
XP_022964007.1	1.2e-62	65.74	ethylene-responsive transcription factor TINY-like [Cucurbita moschata]	[more]

BLAST of PI0018005.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G11590.1	3.7e-22	43.79	Integrase-type DNA-binding superfamily protein	[more]
AT3G16280.1	1.4e-21	41.07	Integrase-type DNA-binding superfamily protein	[more]
AT1G77200.1	9.2e-21	42.77	Integrase-type DNA-binding superfamily protein	[more]
AT5G25810.1	9.2e-21	41.57	Integrase-type DNA-binding superfamily protein	[more]
AT4G32800.1	1.1e-18	49.07	Integrase-type DNA-binding superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001471	AP2/ERF domain	SMART	SM00380	rav1_2	coord: 33..74 e-value: 5.6E-5 score: 29.8
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..18
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..31
None	No IPR available	PANTHER	PTHR31985	ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED	coord: 46..141
None	No IPR available	PANTHER	PTHR31985:SF95	AP2 DOMAIN CLASS TRANSCRIPTION FACTOR	coord: 46..141
None	No IPR available	PANTHER	PTHR31985:SF95	AP2 DOMAIN CLASS TRANSCRIPTION FACTOR	coord: 4..46
None	No IPR available	PANTHER	PTHR31985	ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED	coord: 4..46
IPR016177	DNA-binding domain superfamily	SUPERFAMILY	54171	DNA-binding domain	coord: 33..68

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
PI0018005	PI0018005	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
PI0018005.1-exon	PI0018005.1-exon-chr01:27831807..27831941	exon
PI0018005.1-exon	PI0018005.1-exon-chr01:27832007..27832408	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
PI0018005.1-cds	PI0018005.1-cds-chr01:27831807..27831941	CDS
PI0018005.1-cds	PI0018005.1-cds-chr01:27832007..27832408	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
PI0018005.1	PI0018005.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0003700	DNA-binding transcription factor activity