PI0017405.1 (mRNA) Melon (PI 482460) v1

Overview


Name	PI0017405.1
Type	mRNA
Organism	Cucumis metuliferus (Melon (PI 482460) v1)
Description	Stress response protein NST1-like
Location	chr07: 8630570 .. 8631025 (-)
Sequence length	456
RNA-Seq Expression	PI0017405.1
Synteny	PI0017405.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCTCGGGAACCTGAGCGAGCAAGTGGCAGAGCTCCCCGCGAAGTTTAAGGCTTTGGAGCCTGAGAGAGACCTCGAGGTCATCGTTGAAGAACTCGAGGATGAGCTAGAGGCGATGAGCCCACTTGATCAAGGGTCGCCGCCTAAAAAACAAAGAGAGGTCGTCGAACCATCCAAAGGGAAAAAGAAGATTGGGAGCTTTGGACCTGAAGAGCACCCATCCGGCGGCGAAGCCAAAACAAAAACAACCTCAATCAACTCACTGATAAAGGTTGAGAAAAGGTTGTTTCCATTCAATGGCCCACTCCCAGACTTCCTCTATGCGCCTATCCAAGCGTTTGGCTGGAAGAAATTTTTCAAAGGGCACACCAAAGTGGGAATAAGTGTGGTGGAGAAATTTTACGCCACTAAACTCAAAGCTGAAGAGTTTAGCGTTGAAATTAGTGGAAAACGGTGA

mRNA sequence

ATGCTCGGGAACCTGAGCGAGCAAGTGGCAGAGCTCCCCGCGAAGTTTAAGGCTTTGGAGCCTGAGAGAGACCTCGAGGTCATCGTTGAAGAACTCGAGGATGAGCTAGAGGCGATGAGCCCACTTGATCAAGGGTCGCCGCCTAAAAAACAAAGAGAGGTCGTCGAACCATCCAAAGGGAAAAAGAAGATTGGGAGCTTTGGACCTGAAGAGCACCCATCCGGCGGCGAAGCCAAAACAAAAACAACCTCAATCAACTCACTGATAAAGGTTGAGAAAAGGTTGTTTCCATTCAATGGCCCACTCCCAGACTTCCTCTATGCGCCTATCCAAGCGTTTGGCTGGAAGAAATTTTTCAAAGGGCACACCAAAGTGGGAATAAGTGTGGTGGAGAAATTTTACGCCACTAAACTCAAAGCTGAAGAGTTTAGCGTTGAAATTAGTGGAAAACGGTGA

Coding sequence (CDS)

ATGCTCGGGAACCTGAGCGAGCAAGTGGCAGAGCTCCCCGCGAAGTTTAAGGCTTTGGAGCCTGAGAGAGACCTCGAGGTCATCGTTGAAGAACTCGAGGATGAGCTAGAGGCGATGAGCCCACTTGATCAAGGGTCGCCGCCTAAAAAACAAAGAGAGGTCGTCGAACCATCCAAAGGGAAAAAGAAGATTGGGAGCTTTGGACCTGAAGAGCACCCATCCGGCGGCGAAGCCAAAACAAAAACAACCTCAATCAACTCACTGATAAAGGTTGAGAAAAGGTTGTTTCCATTCAATGGCCCACTCCCAGACTTCCTCTATGCGCCTATCCAAGCGTTTGGCTGGAAGAAATTTTTCAAAGGGCACACCAAAGTGGGAATAAGTGTGGTGGAGAAATTTTACGCCACTAAACTCAAAGCTGAAGAGTTTAGCGTTGAAATTAGTGGAAAACGGTGA

Protein sequence

MLGNLSEQVAELPAKFKALEPERDLEVIVEELEDELEAMSPLDQGSPPKKQREVVEPSKGKKKIGSFGPEEHPSGGEAKTKTTSINSLIKVEKRLFPFNGPLPDFLYAPIQAFGWKKFFKGHTKVGISVVEKFYATKLKAEEFSVEISGKR

Homology

[Close]

BLAST of PI0017405.1 vs. ExPASy TrEMBL
Match: A0A5A7TBU7 (Stress response protein NST1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold279G00120 PE=4 SV=1)

HSP 1 Score: 82.0 bits (201), Expect = 2.3e-12
Identity = 55/156 (35.26%), Postives = 84/156 (53.85%), Query Frame = 0


Query: 2   LGNLSEQVAELPAKFKALEPER--DLEVIVEELEDELEAMSPLDQGSPPKKQR----EVV 61
           L +LSEQV  +  + K  E +    ++V+VEE   E+E MSPL     P+++     E  
Sbjct: 170 LASLSEQVESVVTRSKVAEHQEVDRVDVMVEEFSREIEGMSPLGPRPRPEEKGLTNIEFP 229

Query: 62  EPSKGKKKIGSFGPEEHPSGGEAKTKTTSINSLIKVEKRLFPFNGPLPDFLYAPIQAFGW 121
           + SK K+K G+  P++   G   K     ++ LIK+EK L PFN PL +FLY  I+    
Sbjct: 230 KKSKSKRKAGTSRPKDIQRGN--KMSAQKLDKLIKIEKGLLPFNDPLLNFLYGLIKTMKL 289

Query: 122 KKFFKGHTKVGISVVEKFYATKLKAEEFSVEISGKR 152
           +KFF   TKV + +V+ FY  K    E  + + G++
Sbjct: 290 EKFFIEETKVKLDIVDMFYVAKFHLNESYMIVEGEK 323

[Close]

BLAST of PI0017405.1 vs. ExPASy TrEMBL
Match: A0A5D3DQE7 (Stress response protein NST1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold862G00740 PE=4 SV=1)

HSP 1 Score: 82.0 bits (201), Expect = 2.3e-12
Identity = 55/156 (35.26%), Postives = 84/156 (53.85%), Query Frame = 0


Query: 2   LGNLSEQVAELPAKFKALEPER--DLEVIVEELEDELEAMSPLDQGSPPKKQR----EVV 61
           L +LSEQV  +  + K  E +    ++V+VEE   E+E MSPL     P+++     E  
Sbjct: 139 LASLSEQVESVVTRSKVAEHQEVDRVDVMVEEFSREIEGMSPLGPRPRPEEKGLTNIEFP 198

Query: 62  EPSKGKKKIGSFGPEEHPSGGEAKTKTTSINSLIKVEKRLFPFNGPLPDFLYAPIQAFGW 121
           + SK K+K G+  P++   G   K     ++ LIK+EK L PFN PL +FLY  I+    
Sbjct: 199 KKSKSKRKAGTSRPKDIQRGN--KMSAQKLDKLIKIEKGLLPFNDPLLNFLYGLIKTMKL 258

Query: 122 KKFFKGHTKVGISVVEKFYATKLKAEEFSVEISGKR 152
           +KFF   TKV + +V+ FY  K    E  + + G++
Sbjct: 259 EKFFIEETKVKLDIVDMFYVAKFHLNESYMIVEGEK 292

[Close]

BLAST of PI0017405.1 vs. ExPASy TrEMBL
Match: A0A5D3CEC7 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold76G00090 PE=4 SV=1)

HSP 1 Score: 73.9 bits (180), Expect = 6.3e-10
Identity = 32/61 (52.46%), Postives = 42/61 (68.85%), Query Frame = 0


Query: 82  TTSINSLIKVEKRLFPFNGPLPDFLYAPIQAFGWKKFFKGHTKVGISVVEKFYATKLKAE 141
           T  ++ LIK+EK L PFN  LPDFLY PI+A  W+KFF G  KV + +++ FYATK   +
Sbjct: 3   TQYMDKLIKIEKGLLPFNSHLPDFLYGPIKALKWEKFFTGEMKVRLDIIDMFYATKYHLD 62

Query: 142 E 143
           E
Sbjct: 63  E 63

[Close]

BLAST of PI0017405.1 vs. ExPASy TrEMBL
Match: A0A0A0LT82 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G169970 PE=4 SV=1)

HSP 1 Score: 73.6 bits (179), Expect = 8.2e-10
Identity = 35/67 (52.24%), Postives = 44/67 (65.67%), Query Frame = 0


Query: 85  INSLIKVEKRLFPFNGPLPDFLYAPIQAFGWKKFFKGHTKVGISVVEKFYATKLKAEEFS 144
           ++ LIK+EK L  FNG LPDFLYAPI+A  W+KFF   TKV   VV+ FYATK   +E  
Sbjct: 6   LDRLIKIEKGLLSFNGSLPDFLYAPIKALKWEKFFTDETKVKFDVVDLFYATKFHPKESY 65

Query: 145 VEISGKR 152
             +  +R
Sbjct: 66  AIVDDER 72

[Close]

BLAST of PI0017405.1 vs. ExPASy TrEMBL
Match: A0A5A7VMD3 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold550G00650 PE=4 SV=1)

HSP 1 Score: 70.1 bits (170), Expect = 9.0e-09
Identity = 42/115 (36.52%), Postives = 62/115 (53.91%), Query Frame = 0


Query: 39  MSPLDQGSPPKKQR--EVVEPSKGKKKIGSFGPEEHPSGGEAKTKTTSINSLIKVEKRLF 98
           MS L+    P++Q   +   P K K K+ +   E+  +      +   ++ L+K+EK LF
Sbjct: 1   MSHLESRLRPEEQGLVDTTRPKKDKNKVRTSRSEDVQTSEPLNDQ--KLDKLLKIEKGLF 60

Query: 99  PFNGPLPDFLYAPIQAFGWKKFFKGHTKVGISVVEKFYATKLKAEEFSVEISGKR 152
            F+G L DFLY PI+AF W+KFF+G  KV + VV  FY  K    E    + GK+
Sbjct: 61  LFSGHLLDFLYEPIKAFKWEKFFRGDAKVRLDVVNMFYTVKYYQVESYATVEGKK 113

[Close]

BLAST of PI0017405.1 vs. NCBI nr
Match: TYK25768.1 (stress response protein NST1-like [Cucumis melo var. makuwa])

HSP 1 Score: 82.0 bits (201), Expect = 4.7e-12
Identity = 55/156 (35.26%), Postives = 84/156 (53.85%), Query Frame = 0


Query: 2   LGNLSEQVAELPAKFKALEPER--DLEVIVEELEDELEAMSPLDQGSPPKKQR----EVV 61
           L +LSEQV  +  + K  E +    ++V+VEE   E+E MSPL     P+++     E  
Sbjct: 139 LASLSEQVESVVTRSKVAEHQEVDRVDVMVEEFSREIEGMSPLGPRPRPEEKGLTNIEFP 198

Query: 62  EPSKGKKKIGSFGPEEHPSGGEAKTKTTSINSLIKVEKRLFPFNGPLPDFLYAPIQAFGW 121
           + SK K+K G+  P++   G   K     ++ LIK+EK L PFN PL +FLY  I+    
Sbjct: 199 KKSKSKRKAGTSRPKDIQRGN--KMSAQKLDKLIKIEKGLLPFNDPLLNFLYGLIKTMKL 258

Query: 122 KKFFKGHTKVGISVVEKFYATKLKAEEFSVEISGKR 152
           +KFF   TKV + +V+ FY  K    E  + + G++
Sbjct: 259 EKFFIEETKVKLDIVDMFYVAKFHLNESYMIVEGEK 292

[Close]

BLAST of PI0017405.1 vs. NCBI nr
Match: KAA0038829.1 (stress response protein NST1-like [Cucumis melo var. makuwa])

HSP 1 Score: 82.0 bits (201), Expect = 4.7e-12
Identity = 55/156 (35.26%), Postives = 84/156 (53.85%), Query Frame = 0


Query: 2   LGNLSEQVAELPAKFKALEPER--DLEVIVEELEDELEAMSPLDQGSPPKKQR----EVV 61
           L +LSEQV  +  + K  E +    ++V+VEE   E+E MSPL     P+++     E  
Sbjct: 170 LASLSEQVESVVTRSKVAEHQEVDRVDVMVEEFSREIEGMSPLGPRPRPEEKGLTNIEFP 229

Query: 62  EPSKGKKKIGSFGPEEHPSGGEAKTKTTSINSLIKVEKRLFPFNGPLPDFLYAPIQAFGW 121
           + SK K+K G+  P++   G   K     ++ LIK+EK L PFN PL +FLY  I+    
Sbjct: 230 KKSKSKRKAGTSRPKDIQRGN--KMSAQKLDKLIKIEKGLLPFNDPLLNFLYGLIKTMKL 289

Query: 122 KKFFKGHTKVGISVVEKFYATKLKAEEFSVEISGKR 152
           +KFF   TKV + +V+ FY  K    E  + + G++
Sbjct: 290 EKFFIEETKVKLDIVDMFYVAKFHLNESYMIVEGEK 323

[Close]

BLAST of PI0017405.1 vs. NCBI nr
Match: KAA0065467.1 (hypothetical protein E6C27_scaffold17G001620 [Cucumis melo var. makuwa] >TYK08709.1 hypothetical protein E5676_scaffold76G00090 [Cucumis melo var. makuwa])

HSP 1 Score: 73.9 bits (180), Expect = 1.3e-09
Identity = 32/61 (52.46%), Postives = 42/61 (68.85%), Query Frame = 0


Query: 82  TTSINSLIKVEKRLFPFNGPLPDFLYAPIQAFGWKKFFKGHTKVGISVVEKFYATKLKAE 141
           T  ++ LIK+EK L PFN  LPDFLY PI+A  W+KFF G  KV + +++ FYATK   +
Sbjct: 3   TQYMDKLIKIEKGLLPFNSHLPDFLYGPIKALKWEKFFTGEMKVRLDIIDMFYATKYHLD 62

Query: 142 E 143
           E
Sbjct: 63  E 63

[Close]

BLAST of PI0017405.1 vs. NCBI nr
Match: KGN64973.1 (hypothetical protein Csa_022771 [Cucumis sativus])

HSP 1 Score: 73.6 bits (179), Expect = 1.7e-09
Identity = 35/67 (52.24%), Postives = 44/67 (65.67%), Query Frame = 0


Query: 85  INSLIKVEKRLFPFNGPLPDFLYAPIQAFGWKKFFKGHTKVGISVVEKFYATKLKAEEFS 144
           ++ LIK+EK L  FNG LPDFLYAPI+A  W+KFF   TKV   VV+ FYATK   +E  
Sbjct: 6   LDRLIKIEKGLLSFNGSLPDFLYAPIKALKWEKFFTDETKVKFDVVDLFYATKFHPKESY 65

Query: 145 VEISGKR 152
             +  +R
Sbjct: 66  AIVDDER 72

[Close]

BLAST of PI0017405.1 vs. NCBI nr
Match: KAA0066935.1 (hypothetical protein E6C27_scaffold550G00650 [Cucumis melo var. makuwa])

HSP 1 Score: 70.1 bits (170), Expect = 1.9e-08
Identity = 42/115 (36.52%), Postives = 62/115 (53.91%), Query Frame = 0


Query: 39  MSPLDQGSPPKKQR--EVVEPSKGKKKIGSFGPEEHPSGGEAKTKTTSINSLIKVEKRLF 98
           MS L+    P++Q   +   P K K K+ +   E+  +      +   ++ L+K+EK LF
Sbjct: 1   MSHLESRLRPEEQGLVDTTRPKKDKNKVRTSRSEDVQTSEPLNDQ--KLDKLLKIEKGLF 60

Query: 99  PFNGPLPDFLYAPIQAFGWKKFFKGHTKVGISVVEKFYATKLKAEEFSVEISGKR 152
            F+G L DFLY PI+AF W+KFF+G  KV + VV  FY  K    E    + GK+
Sbjct: 61  LFSGHLLDFLYEPIKAFKWEKFFRGDAKVRLDVVNMFYTVKYYQVESYATVEGKK 113

The following BLAST results are available for this feature:

BLAST of PI0017405.1 vs.


Match Name	E-value	Identity	Description

BLAST of PI0017405.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7TBU7	2.3e-12	35.26	Stress response protein NST1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C2...	[more]
A0A5D3DQE7	2.3e-12	35.26	Stress response protein NST1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E567...	[more]
A0A5D3CEC7	6.3e-10	52.46	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A0A0LT82	8.2e-10	52.24	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G169970 PE=4 SV=1	[more]
A0A5A7VMD3	9.0e-09	36.52	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]

BLAST of PI0017405.1 vs. NCBI nr


Match Name	E-value	Identity	Description
TYK25768.1	4.7e-12	35.26	stress response protein NST1-like [Cucumis melo var. makuwa]	[more]
KAA0038829.1	4.7e-12	35.26	stress response protein NST1-like [Cucumis melo var. makuwa]	[more]
KAA0065467.1	1.3e-09	52.46	hypothetical protein E6C27_scaffold17G001620 [Cucumis melo var. makuwa] >TYK0870...	[more]
KGN64973.1	1.7e-09	52.24	hypothetical protein Csa_022771 [Cucumis sativus]	[more]
KAA0066935.1	1.9e-08	36.52	hypothetical protein E6C27_scaffold550G00650 [Cucumis melo var. makuwa]	[more]

BLAST of PI0017405.1 vs. NCBI nr


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 36..82
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 49..68

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
PI0017405	PI0017405	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
PI0017405.1-exon	PI0017405.1-exon-chr07:8630570..8631025	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
PI0017405.1-cds	PI0017405.1-cds-chr07:8630570..8631025	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
PI0017405.1	PI0017405.1-protein	polypeptide