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Sequences
The following sequences are available for this feature:
Gene sequence (with intron) Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below. ATGGATGCCTCATCTTTCGGCCAAGTTGAAAAAACTCATTCCCTCCAAGATCTTACTTTTGATCAGATCTACATCAAAATTCAAGCGATGTTGATAATTTGTTGGTGGGGCCTTGGTGATTCTGTATATCTCTCGAGTGTAAAAAGGGAGAAAACCAACAGTCTTCAGCTAGAAGAGGGGCGCGCAGTTTGGCCTTGGACCAAGTCAGAGATCTTTTGAGTTGGTTGGCTTTTGCTTGTCAGGTCAGCTGAATATTAAATGATAAAATTGTAACTTTGCTTTAAACTACAGTTACCATCACTTCTTTTGATGATCCCTTCTTTAGCTTTAGAATAGTTCCTGCAGGCAGAATCTGTAA mRNA sequence ATGGATGCCTCATCTTTCGGCCAAGTTGAAAAAACTCATTCCCTCCAAGATCTTACTTTTGATCAGATCTACATCAAAATTCAAGCGATGTTGATAATTTGTTGGTGGGGCCTTGGTGATTCTGTATATCTCTCGAGTGTAAAAAGGGAGAAAACCAACAGTCTTCAGCTAGAAGAGGGGCGCGCAGTTTGGCCTTGGACCAAGCAGAATCTGTAA Coding sequence (CDS) ATGGATGCCTCATCTTTCGGCCAAGTTGAAAAAACTCATTCCCTCCAAGATCTTACTTTTGATCAGATCTACATCAAAATTCAAGCGATGTTGATAATTTGTTGGTGGGGCCTTGGTGATTCTGTATATCTCTCGAGTGTAAAAAGGGAGAAAACCAACAGTCTTCAGCTAGAAGAGGGGCGCGCAGTTTGGCCTTGGACCAAGCAGAATCTGTAA Protein sequence MDASSFGQVEKTHSLQDLTFDQIYIKIQAMLIICWWGLGDSVYLSSVKREKTNSLQLEEGRAVWPWTKQNL
Homology
BLAST of PI0017167.1 vs. ExPASy TrEMBL
Match: A0A0A0KDE8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G148210 PE=4 SV=1) HSP 1 Score: 133.7 bits (335), Expect = 3.1e-28 Identity = 63/71 (88.73%), Postives = 65/71 (91.55%), Query Frame = 0
Query: 1 MDASSFGQVEKTHSLQDLTFDQIYIKIQAMLIICWWGLGDSVYLSSVKREKTNSLQLEEG 60
MDASSF QVE SLQDLTFDQIYI+IQ MLIICWWGLGDSVYLSSVKR KTNSLQLEEG
Sbjct: 1 MDASSFSQVEVARSLQDLTFDQIYIEIQLMLIICWWGLGDSVYLSSVKRVKTNSLQLEEG 60
Query: 61 RAVWPWTKQNL 72
RAVWPWT+QNL
Sbjct: 61 RAVWPWTRQNL 71
BLAST of PI0017167.1 vs. NCBI nr
Match: KAE8646894.1 (hypothetical protein Csa_020928 [Cucumis sativus]) HSP 1 Score: 127.5 bits (319), Expect = 4.6e-26 Identity = 60/67 (89.55%), Postives = 61/67 (91.04%), Query Frame = 0
Query: 1 MDASSFGQVEKTHSLQDLTFDQIYIKIQAMLIICWWGLGDSVYLSSVKREKTNSLQLEEG 60
MDASSF QVE SLQDLTFDQIYI+IQ MLIICWWGLGDSVYLSSVKR KTNSLQLEEG
Sbjct: 1 MDASSFSQVEVARSLQDLTFDQIYIEIQLMLIICWWGLGDSVYLSSVKRVKTNSLQLEEG 60
Query: 61 RAVWPWT 68
RAVWPWT
Sbjct: 61 RAVWPWT 67
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
|---|
| Match Name | E-value | Identity | Description | |
|---|
| A0A0A0KDE8 | 3.1e-28 | 88.73 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G148210 PE=4 SV=1 | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| KAE8646894.1 | 4.6e-26 | 89.55 | hypothetical protein Csa_020928 [Cucumis sativus] | [more] |
| Match Name | E-value | Identity | Description | |
|---|
Relationships
This mRNA is a part of the following gene feature(s):
| Feature Name | Unique Name | Type |
|---|
| PI0017167 | PI0017167 | gene |
The following exon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Type |
|---|
| PI0017167.1-exon | PI0017167.1-exon-chr11:5444061..5444073 | exon |
| PI0017167.1-exon | PI0017167.1-exon-chr11:5444216..5444418 | exon |
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Type |
|---|
| PI0017167.1-cds | PI0017167.1-cds-chr11:5444061..5444073 | CDS |
| PI0017167.1-cds | PI0017167.1-cds-chr11:5444216..5444418 | CDS |
The following polypeptide feature(s) derives from this mRNA:
| Feature Name | Unique Name | Type |
|---|
| PI0017167.1 | PI0017167.1-protein | polypeptide |
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