PI0014639.1 (mRNA) Melon (PI 482460) v1

Overview


Name	PI0014639.1
Type	mRNA
Organism	Cucumis metuliferus (Melon (PI 482460) v1)
Description	TPR_REGION domain-containing protein
Location	chr03: 2924814 .. 2926530 (-)
Sequence length	1365
RNA-Seq Expression	PI0014639.1
Synteny	PI0014639.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TGGAATTATAATTTCCTATTTATTCTGACCGTAGCTGTAGAGTTGACGGCAAAATTAAACCGCCGCCCTATGCAGTCCCGCCTCCGATCTTCTCCAATCCCTAACTCCGTTCAGATCCAATTTTGATCGTATTCGGAGTTCTTCCAATTCCCGGAATTAATCGAAAGCAGAGTGAAAGAAATTGGCTGTGCACGCAGTTCGTTCAGAGATCGATAAACATGGTGACTGACATACTTCTTCAAATTGCTCTCATCCTCGTAATGGTCGTCATGTTCCTCGCTATGCACAACATTCCACAGAGATACTTCGCCAAGCTCCGATTGCGCTTCCGATCCAACGTCGAATCCAAACGGCACTTTGTGAGAGGCGCTCAGCTTCTCGCTCGAGCGAGATCTGCTCCGTCGCGCTCCTCGGCCACATCGTTAGCAGTAGAAGTCGTAGCGGAAGCCGATAAGGCCATAGCTCTCGATCCTAAGGATGCCGCCGCTCACATCCTCAAAGCTTTGGCTCTCGACATTCAAGGATTCAAAACCTCTGCTCTGGAATCGCTCGATACGGCGCTATCGCCGCTCGTCGCTAAGTCGCTCAGCGATGAAGAACGAGGCGACGCCTTGTTCAAGCGAGCTGAGTTGAAGATGTCCACGAATCGACGAGCCCTAGTTGACTCGGCTTTGGCTGATTTGACCGAGTCCGTGACACTGAGCCGGAATGCAAAGTCCTACTATTGGTTGGGGAAATGCTATGAGACGAAGAAACTGAGAGAAGAGGCCAAGAAAGCATATGAAGAAGCTTTGAACATCGAACCACGATTATCCAACGCTATGGAGGCATTGGAGCATCTATCATCGTCGTAATCAAGCTGATGTCTACTGTGATCTATGGAATGTCAACGCTAGAAGATAAGAGCATCTCTCAATTTTTCCAGGTCCAAATATCCTCTCCATTTTCGCTGATTCTTGCTATGCCTTTCCTTAAGCTGTATTACGATTTAGATGCTGAATTGGCTTGTGAGATGAAATCGAGCTGCTATTCTCATCTCCATGATAGGCGTTTGAATGGGGTTTAATATTTGCTTAGTTTGCTTGTCTTTGATTTAGTCTGTTGATTTAGTACCGTAGTTTTAGTTGTAATTTTTGTGAAATTAGGGATTGGAACAAACCCAGAAAGGAAATTAGCAATTAGCATGGATAATCTTCGAAGTAGCTTTGCTTCTGTGATCTTCATGAAATGAAATTTGAAAGTTCTCAAAGACGTTTATCTGATTCTGATTTTTGTAGGAAGACGACCGAAGTTTGGTTCAAATGTCAAATGATTGACGACAACTAATATTTTACTTGCAGTAGATTCACCTTTTTTGAATTGAAGAGACTTCGAGCGGTTAAAATAGTCGCAAAATTTTGTTGATTCGTGTAAGCAAAAACAAAAGAAAAATATTATGGGCATCCCAAACTTGTCATGTAGCAAAACTCGAGGGCCAGCAATGCTCTGCATACATCCATAGGTTCATTTGACAACACACCAAATTTGAATTACCACTTCATGGAATTTTTTTGAATTCCTGTTTGAAGAAATATTATGGATTTCAGGATAAAGCTTGTTATAGTCAAAACAATGATTACTCAAACACATCACTATGTCTATGGGTGGTTTGAATTATTTGGAAACTATTTTGAAAATATTTTTTTCTTTTTCAAATTTATTGTCATATGAAGATTAA

mRNA sequence

TGGAATTATAATTTCCTATTTATTCTGACCGTAGCTGTAGAGTTGACGGCAAAATTAAACCGCCGCCCTATGCAGTCCCGCCTCCGATCTTCTCCAATCCCTAACTCCGTTCAGATCCAATTTTGATCGTATTCGGAGTTCTTCCAATTCCCGGAATTAATCGAAAGCAGAGTGAAAGAAATTGGCTGTGCACGCAGTTCGTTCAGAGATCGATAAACATGGTGACTGACATACTTCTTCAAATTGCTCTCATCCTCGTAATGGTCGTCATGTTCCTCGCTATGCACAACATTCCACAGAGATACTTCGCCAAGCTCCGATTGCGCTTCCGATCCAACGTCGAATCCAAACGGCACTTTGTGAGAGGCGCTCAGCTTCTCGCTCGAGCGAGATCTGCTCCGTCGCGCTCCTCGGCCACATCGTTAGCAGTAGAAGTCGTAGCGGAAGCCGATAAGGCCATAGCTCTCGATCCTAAGGATGCCGCCGCTCACATCCTCAAAGCTTTGGCTCTCGACATTCAAGGATTCAAAACCTCTGCTCTGGAATCGCTCGATACGGCGCTATCGCCGCTCGTCGCTAAGTCGCTCAGCGATGAAGAACGAGGCGACGCCTTGTTCAAGCGAGCTGAGTTGAAGATGTCCACGAATCGACGAGCCCTAGTTGACTCGGCTTTGGCTGATTTGACCGAGTCCGTGACACTGAGCCGGAATGCAAAGTCCTACTATTGGTTGGGGAAATGCTATGAGACGAAGAAACTGAGAGAAGAGGCCAAGAAAGCATATGAAGAAGCTTTGAACATCGAACCACGATTATCCAACGCTATGGAGGCATTGGAGCATCTATCATCGTCGTAATCAAGCTGATGTCTACTGTGATCTATGGAATGTCAACGCTAGAAGATAAGAGCATCTCTCAATTTTTCCAGGAAGACGACCGAAGTTTGGTTCAAATGTCAAATGATTGACGACAACTAATATTTTACTTGCAGTAGATTCACCTTTTTTGAATTGAAGAGACTTCGAGCGGTTAAAATAGTCGCAAAATTTTGTTGATTCGTGTAAGCAAAAACAAAAGAAAAATATTATGGGCATCCCAAACTTGTCATGTAGCAAAACTCGAGGGCCAGCAATGCTCTGCATACATCCATAGGTTCATTTGACAACACACCAAATTTGAATTACCACTTCATGGAATTTTTTTGAATTCCTGTTTGAAGAAATATTATGGATTTCAGGATAAAGCTTGTTATAGTCAAAACAATGATTACTCAAACACATCACTATGTCTATGGGTGGTTTGAATTATTTGGAAACTATTTTGAAAATATTTTTTTCTTTTTCAAATTTATTGTCATATGAAGATTAA

Coding sequence (CDS)

ATGGTGACTGACATACTTCTTCAAATTGCTCTCATCCTCGTAATGGTCGTCATGTTCCTCGCTATGCACAACATTCCACAGAGATACTTCGCCAAGCTCCGATTGCGCTTCCGATCCAACGTCGAATCCAAACGGCACTTTGTGAGAGGCGCTCAGCTTCTCGCTCGAGCGAGATCTGCTCCGTCGCGCTCCTCGGCCACATCGTTAGCAGTAGAAGTCGTAGCGGAAGCCGATAAGGCCATAGCTCTCGATCCTAAGGATGCCGCCGCTCACATCCTCAAAGCTTTGGCTCTCGACATTCAAGGATTCAAAACCTCTGCTCTGGAATCGCTCGATACGGCGCTATCGCCGCTCGTCGCTAAGTCGCTCAGCGATGAAGAACGAGGCGACGCCTTGTTCAAGCGAGCTGAGTTGAAGATGTCCACGAATCGACGAGCCCTAGTTGACTCGGCTTTGGCTGATTTGACCGAGTCCGTGACACTGAGCCGGAATGCAAAGTCCTACTATTGGTTGGGGAAATGCTATGAGACGAAGAAACTGAGAGAAGAGGCCAAGAAAGCATATGAAGAAGCTTTGAACATCGAACCACGATTATCCAACGCTATGGAGGCATTGGAGCATCTATCATCGTCGTAA

Protein sequence

MVTDILLQIALILVMVVMFLAMHNIPQRYFAKLRLRFRSNVESKRHFVRGAQLLARARSAPSRSSATSLAVEVVAEADKAIALDPKDAAAHILKALALDIQGFKTSALESLDTALSPLVAKSLSDEERGDALFKRAELKMSTNRRALVDSALADLTESVTLSRNAKSYYWLGKCYETKKLREEAKKAYEEALNIEPRLSNAMEALEHLSSS

Homology

[Close]

BLAST of PI0014639.1 vs. ExPASy TrEMBL
Match: A0A0A0LPL8 (TPR_REGION domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G370460 PE=4 SV=1)

HSP 1 Score: 359.8 bits (922), Expect = 8.0e-96
Identity = 204/211 (96.68%), Postives = 206/211 (97.63%), Query Frame = 0


Query: 1   MVTDILLQIALILVMVVMFLAMHNIPQRYFAKLRLRFRSNVESKRHFVRGAQLLARARSA 60
           MVTDILLQIALILVMVVMFLAMHNIPQRYFAKLRLRFRSNVESKRHFVRGAQLLARARSA
Sbjct: 1   MVTDILLQIALILVMVVMFLAMHNIPQRYFAKLRLRFRSNVESKRHFVRGAQLLARARSA 60

Query: 61  PSRSSATSLAVEVVAEADKAIALDPKDAAAHILKALALDIQGFKTSALESLDTALSPLVA 120
           PSRSSATSLA EVVAEA+KAIALDPKDAAAHILKALALD QGFKTSALESLDTALSPLVA
Sbjct: 61  PSRSSATSLAEEVVAEANKAIALDPKDAAAHILKALALDTQGFKTSALESLDTALSPLVA 120

Query: 121 KSLSDEERGDALFKRAELKMSTNRRALVDSALADLTESVTLSRNAKSYYWLGKCYETKKL 180
           KSLSDEERGDALFKRAELKMSTNRRALVDSALADLTESVTLS+NA SYYWLGKCYETKKL
Sbjct: 121 KSLSDEERGDALFKRAELKMSTNRRALVDSALADLTESVTLSQNANSYYWLGKCYETKKL 180

Query: 181 REEAKKAYEEALNIEPRLSNAMEALEHLSSS 212
           REEAKKAYEEALNIEPRLSNA EALE LSSS
Sbjct: 181 REEAKKAYEEALNIEPRLSNAREALERLSSS 211

[Close]

BLAST of PI0014639.1 vs. ExPASy TrEMBL
Match: A0A5A7VBU3 (TPR domain protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold82G004320 PE=4 SV=1)

HSP 1 Score: 359.0 bits (920), Expect = 1.4e-95
Identity = 203/211 (96.21%), Postives = 206/211 (97.63%), Query Frame = 0


Query: 1   MVTDILLQIALILVMVVMFLAMHNIPQRYFAKLRLRFRSNVESKRHFVRGAQLLARARSA 60
           MVTDILLQIALILVMVVMFLAMHNIPQRYFAKLRLRFRSNVESKRHFVRGAQLLARARSA
Sbjct: 1   MVTDILLQIALILVMVVMFLAMHNIPQRYFAKLRLRFRSNVESKRHFVRGAQLLARARSA 60

Query: 61  PSRSSATSLAVEVVAEADKAIALDPKDAAAHILKALALDIQGFKTSALESLDTALSPLVA 120
           PSRSSATSLA EVVAEA+KAIALDPKDAAAHILKALALD+QGFKTSALESLDTALSPLVA
Sbjct: 61  PSRSSATSLAEEVVAEANKAIALDPKDAAAHILKALALDVQGFKTSALESLDTALSPLVA 120

Query: 121 KSLSDEERGDALFKRAELKMSTNRRALVDSALADLTESVTLSRNAKSYYWLGKCYETKKL 180
           KSLSDEERGDALFKRAELKMSTNRRALVDSALADLTESVTLS+NA SYYWLGKCYE KKL
Sbjct: 121 KSLSDEERGDALFKRAELKMSTNRRALVDSALADLTESVTLSQNANSYYWLGKCYEMKKL 180

Query: 181 REEAKKAYEEALNIEPRLSNAMEALEHLSSS 212
           REEAKKAYEEALNIEPRLSNA EALE LSSS
Sbjct: 181 REEAKKAYEEALNIEPRLSNAREALERLSSS 211

[Close]

BLAST of PI0014639.1 vs. ExPASy TrEMBL
Match: A0A1S3BC86 (uncharacterized protein LOC103488119 OS=Cucumis melo OX=3656 GN=LOC103488119 PE=4 SV=1)

HSP 1 Score: 359.0 bits (920), Expect = 1.4e-95
Identity = 203/211 (96.21%), Postives = 206/211 (97.63%), Query Frame = 0


Query: 1   MVTDILLQIALILVMVVMFLAMHNIPQRYFAKLRLRFRSNVESKRHFVRGAQLLARARSA 60
           MVTDILLQIALILVMVVMFLAMHNIPQRYFAKLRLRFRSNVESKRHFVRGAQLLARARSA
Sbjct: 1   MVTDILLQIALILVMVVMFLAMHNIPQRYFAKLRLRFRSNVESKRHFVRGAQLLARARSA 60

Query: 61  PSRSSATSLAVEVVAEADKAIALDPKDAAAHILKALALDIQGFKTSALESLDTALSPLVA 120
           PSRSSATSLA EVVAEA+KAIALDPKDAAAHILKALALD+QGFKTSALESLDTALSPLVA
Sbjct: 61  PSRSSATSLAEEVVAEANKAIALDPKDAAAHILKALALDVQGFKTSALESLDTALSPLVA 120

Query: 121 KSLSDEERGDALFKRAELKMSTNRRALVDSALADLTESVTLSRNAKSYYWLGKCYETKKL 180
           KSLSDEERGDALFKRAELKMSTNRRALVDSALADLTESVTLS+NA SYYWLGKCYE KKL
Sbjct: 121 KSLSDEERGDALFKRAELKMSTNRRALVDSALADLTESVTLSQNANSYYWLGKCYEMKKL 180

Query: 181 REEAKKAYEEALNIEPRLSNAMEALEHLSSS 212
           REEAKKAYEEALNIEPRLSNA EALE LSSS
Sbjct: 181 REEAKKAYEEALNIEPRLSNAREALERLSSS 211

[Close]

BLAST of PI0014639.1 vs. ExPASy TrEMBL
Match: A0A6J1GK03 (uncharacterized protein LOC111454602 OS=Cucurbita moschata OX=3662 GN=LOC111454602 PE=4 SV=1)

HSP 1 Score: 336.3 bits (861), Expect = 9.4e-89
Identity = 191/211 (90.52%), Postives = 199/211 (94.31%), Query Frame = 0


Query: 1   MVTDILLQIALILVMVVMFLAMHNIPQRYFAKLRLRFRSNVESKRHFVRGAQLLARARSA 60
           MV DILLQIALILVMVVMFLAMHNIPQR+FAKLR RFRS+VESKRHFVRGAQLLARARSA
Sbjct: 1   MVADILLQIALILVMVVMFLAMHNIPQRFFAKLRFRFRSDVESKRHFVRGAQLLARARSA 60

Query: 61  PSRSSATSLAVEVVAEADKAIALDPKDAAAHILKALALDIQGFKTSALESLDTALSPLVA 120
           PSRSSATSLA +VVAEADKAIALDPKDAAAHILKALALDIQGFKTSALESLDTALSPL A
Sbjct: 61  PSRSSATSLAEQVVAEADKAIALDPKDAAAHILKALALDIQGFKTSALESLDTALSPLAA 120

Query: 121 KSLSDEERGDALFKRAELKMSTNRRALVDSALADLTESVTLSRNAKSYYWLGKCYETKKL 180
           KSLS+EERGDAL+KRAELKMSTNRR +VDSALADLTESVTLS+NA +Y WLGKCYE KKL
Sbjct: 121 KSLSNEERGDALYKRAELKMSTNRRTVVDSALADLTESVTLSQNANAYCWLGKCYEMKKL 180

Query: 181 REEAKKAYEEALNIEPRLSNAMEALEHLSSS 212
           R EAKKAYEEALNIEPRLS A EALE LSSS
Sbjct: 181 RGEAKKAYEEALNIEPRLSKAREALERLSSS 211

[Close]

BLAST of PI0014639.1 vs. ExPASy TrEMBL
Match: A0A6J1KRQ5 (uncharacterized protein LOC111496615 OS=Cucurbita maxima OX=3661 GN=LOC111496615 PE=4 SV=1)

HSP 1 Score: 335.9 bits (860), Expect = 1.2e-88
Identity = 190/211 (90.05%), Postives = 200/211 (94.79%), Query Frame = 0


Query: 1   MVTDILLQIALILVMVVMFLAMHNIPQRYFAKLRLRFRSNVESKRHFVRGAQLLARARSA 60
           MV DILLQIALILVMVVMFLAMHNIPQR+FAKLR RFRS+VESKRHFVRGAQLLARARSA
Sbjct: 1   MVADILLQIALILVMVVMFLAMHNIPQRFFAKLRFRFRSDVESKRHFVRGAQLLARARSA 60

Query: 61  PSRSSATSLAVEVVAEADKAIALDPKDAAAHILKALALDIQGFKTSALESLDTALSPLVA 120
           PSRSSATSLA +VVAEADKAIALDPKDAAAHILKALALDIQGFKTSALESLDTALSPL A
Sbjct: 61  PSRSSATSLAEQVVAEADKAIALDPKDAAAHILKALALDIQGFKTSALESLDTALSPLAA 120

Query: 121 KSLSDEERGDALFKRAELKMSTNRRALVDSALADLTESVTLSRNAKSYYWLGKCYETKKL 180
           KSLS+EERGDAL+KRAELKMSTNRRA+VDSA+ADLTESVTLS+NA +Y WLGKCYE KKL
Sbjct: 121 KSLSNEERGDALYKRAELKMSTNRRAVVDSAMADLTESVTLSQNANAYCWLGKCYEMKKL 180

Query: 181 REEAKKAYEEALNIEPRLSNAMEALEHLSSS 212
           R EAKKAYEEALNIEPRLS A EALE LS+S
Sbjct: 181 RGEAKKAYEEALNIEPRLSKAREALERLSTS 211

[Close]

BLAST of PI0014639.1 vs. NCBI nr
Match: XP_004152601.1 (uncharacterized protein LOC101214199 [Cucumis sativus] >KGN62747.1 hypothetical protein Csa_021843 [Cucumis sativus])

HSP 1 Score: 359.8 bits (922), Expect = 1.6e-95
Identity = 204/211 (96.68%), Postives = 206/211 (97.63%), Query Frame = 0


Query: 1   MVTDILLQIALILVMVVMFLAMHNIPQRYFAKLRLRFRSNVESKRHFVRGAQLLARARSA 60
           MVTDILLQIALILVMVVMFLAMHNIPQRYFAKLRLRFRSNVESKRHFVRGAQLLARARSA
Sbjct: 1   MVTDILLQIALILVMVVMFLAMHNIPQRYFAKLRLRFRSNVESKRHFVRGAQLLARARSA 60

Query: 61  PSRSSATSLAVEVVAEADKAIALDPKDAAAHILKALALDIQGFKTSALESLDTALSPLVA 120
           PSRSSATSLA EVVAEA+KAIALDPKDAAAHILKALALD QGFKTSALESLDTALSPLVA
Sbjct: 61  PSRSSATSLAEEVVAEANKAIALDPKDAAAHILKALALDTQGFKTSALESLDTALSPLVA 120

Query: 121 KSLSDEERGDALFKRAELKMSTNRRALVDSALADLTESVTLSRNAKSYYWLGKCYETKKL 180
           KSLSDEERGDALFKRAELKMSTNRRALVDSALADLTESVTLS+NA SYYWLGKCYETKKL
Sbjct: 121 KSLSDEERGDALFKRAELKMSTNRRALVDSALADLTESVTLSQNANSYYWLGKCYETKKL 180

Query: 181 REEAKKAYEEALNIEPRLSNAMEALEHLSSS 212
           REEAKKAYEEALNIEPRLSNA EALE LSSS
Sbjct: 181 REEAKKAYEEALNIEPRLSNAREALERLSSS 211

[Close]

BLAST of PI0014639.1 vs. NCBI nr
Match: XP_008444918.1 (PREDICTED: uncharacterized protein LOC103488119 [Cucumis melo] >KAA0065098.1 TPR domain protein [Cucumis melo var. makuwa])

HSP 1 Score: 359.0 bits (920), Expect = 2.8e-95
Identity = 203/211 (96.21%), Postives = 206/211 (97.63%), Query Frame = 0


Query: 1   MVTDILLQIALILVMVVMFLAMHNIPQRYFAKLRLRFRSNVESKRHFVRGAQLLARARSA 60
           MVTDILLQIALILVMVVMFLAMHNIPQRYFAKLRLRFRSNVESKRHFVRGAQLLARARSA
Sbjct: 1   MVTDILLQIALILVMVVMFLAMHNIPQRYFAKLRLRFRSNVESKRHFVRGAQLLARARSA 60

Query: 61  PSRSSATSLAVEVVAEADKAIALDPKDAAAHILKALALDIQGFKTSALESLDTALSPLVA 120
           PSRSSATSLA EVVAEA+KAIALDPKDAAAHILKALALD+QGFKTSALESLDTALSPLVA
Sbjct: 61  PSRSSATSLAEEVVAEANKAIALDPKDAAAHILKALALDVQGFKTSALESLDTALSPLVA 120

Query: 121 KSLSDEERGDALFKRAELKMSTNRRALVDSALADLTESVTLSRNAKSYYWLGKCYETKKL 180
           KSLSDEERGDALFKRAELKMSTNRRALVDSALADLTESVTLS+NA SYYWLGKCYE KKL
Sbjct: 121 KSLSDEERGDALFKRAELKMSTNRRALVDSALADLTESVTLSQNANSYYWLGKCYEMKKL 180

Query: 181 REEAKKAYEEALNIEPRLSNAMEALEHLSSS 212
           REEAKKAYEEALNIEPRLSNA EALE LSSS
Sbjct: 181 REEAKKAYEEALNIEPRLSNAREALERLSSS 211

[Close]

BLAST of PI0014639.1 vs. NCBI nr
Match: XP_038884950.1 (uncharacterized protein LOC120075535 [Benincasa hispida])

HSP 1 Score: 357.1 bits (915), Expect = 1.1e-94
Identity = 203/211 (96.21%), Postives = 204/211 (96.68%), Query Frame = 0


Query: 1   MVTDILLQIALILVMVVMFLAMHNIPQRYFAKLRLRFRSNVESKRHFVRGAQLLARARSA 60
           MVTDILLQI LILVMVVMFLAMHNIPQRYFAKLRLRFRSNVESKRHFVRGAQLLARARSA
Sbjct: 1   MVTDILLQIVLILVMVVMFLAMHNIPQRYFAKLRLRFRSNVESKRHFVRGAQLLARARSA 60

Query: 61  PSRSSATSLAVEVVAEADKAIALDPKDAAAHILKALALDIQGFKTSALESLDTALSPLVA 120
           PSRSSATSLA EVVAEADKAIALDPKDAAAHILKALALDIQGFKTSALESLDTALSPLVA
Sbjct: 61  PSRSSATSLAEEVVAEADKAIALDPKDAAAHILKALALDIQGFKTSALESLDTALSPLVA 120

Query: 121 KSLSDEERGDALFKRAELKMSTNRRALVDSALADLTESVTLSRNAKSYYWLGKCYETKKL 180
           KSLSDEERGDALFKRAELKMSTNRRALVDSALADLTESVTLS+NA SYYWLGKCYE KKL
Sbjct: 121 KSLSDEERGDALFKRAELKMSTNRRALVDSALADLTESVTLSQNANSYYWLGKCYEIKKL 180

Query: 181 REEAKKAYEEALNIEPRLSNAMEALEHLSSS 212
           R EAKKAYEEALNIEPRLSNA EALE LSSS
Sbjct: 181 RGEAKKAYEEALNIEPRLSNAREALERLSSS 211

[Close]

BLAST of PI0014639.1 vs. NCBI nr
Match: XP_023537835.1 (uncharacterized protein LOC111798743 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 337.8 bits (865), Expect = 6.7e-89
Identity = 192/211 (91.00%), Postives = 200/211 (94.79%), Query Frame = 0


Query: 1   MVTDILLQIALILVMVVMFLAMHNIPQRYFAKLRLRFRSNVESKRHFVRGAQLLARARSA 60
           MV DILLQIALILVMVVMFLAMHNIPQR+FAKLR RFRS+VESKRHFVRGAQLLARARSA
Sbjct: 1   MVADILLQIALILVMVVMFLAMHNIPQRFFAKLRFRFRSDVESKRHFVRGAQLLARARSA 60

Query: 61  PSRSSATSLAVEVVAEADKAIALDPKDAAAHILKALALDIQGFKTSALESLDTALSPLVA 120
           PSRSSATSLA +VVAEADKAIALDPKDAAAHILKALALDIQGFKTSALESLDTALSPL A
Sbjct: 61  PSRSSATSLAEQVVAEADKAIALDPKDAAAHILKALALDIQGFKTSALESLDTALSPLAA 120

Query: 121 KSLSDEERGDALFKRAELKMSTNRRALVDSALADLTESVTLSRNAKSYYWLGKCYETKKL 180
           KSLS+EERGDAL+KRAELKMSTNRRA+VDSALADLTESVTLS+NA +Y WLGKCYE KKL
Sbjct: 121 KSLSNEERGDALYKRAELKMSTNRRAVVDSALADLTESVTLSQNANAYCWLGKCYEMKKL 180

Query: 181 REEAKKAYEEALNIEPRLSNAMEALEHLSSS 212
           R EAKKAYEEALNIEPRLS A EALE LSSS
Sbjct: 181 RGEAKKAYEEALNIEPRLSKAREALERLSSS 211

[Close]

BLAST of PI0014639.1 vs. NCBI nr
Match: XP_022951869.1 (uncharacterized protein LOC111454602 [Cucurbita moschata] >KAG6585344.1 hypothetical protein SDJN03_18077, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 336.3 bits (861), Expect = 2.0e-88
Identity = 191/211 (90.52%), Postives = 199/211 (94.31%), Query Frame = 0


Query: 1   MVTDILLQIALILVMVVMFLAMHNIPQRYFAKLRLRFRSNVESKRHFVRGAQLLARARSA 60
           MV DILLQIALILVMVVMFLAMHNIPQR+FAKLR RFRS+VESKRHFVRGAQLLARARSA
Sbjct: 1   MVADILLQIALILVMVVMFLAMHNIPQRFFAKLRFRFRSDVESKRHFVRGAQLLARARSA 60

Query: 61  PSRSSATSLAVEVVAEADKAIALDPKDAAAHILKALALDIQGFKTSALESLDTALSPLVA 120
           PSRSSATSLA +VVAEADKAIALDPKDAAAHILKALALDIQGFKTSALESLDTALSPL A
Sbjct: 61  PSRSSATSLAEQVVAEADKAIALDPKDAAAHILKALALDIQGFKTSALESLDTALSPLAA 120

Query: 121 KSLSDEERGDALFKRAELKMSTNRRALVDSALADLTESVTLSRNAKSYYWLGKCYETKKL 180
           KSLS+EERGDAL+KRAELKMSTNRR +VDSALADLTESVTLS+NA +Y WLGKCYE KKL
Sbjct: 121 KSLSNEERGDALYKRAELKMSTNRRTVVDSALADLTESVTLSQNANAYCWLGKCYEMKKL 180

Query: 181 REEAKKAYEEALNIEPRLSNAMEALEHLSSS 212
           R EAKKAYEEALNIEPRLS A EALE LSSS
Sbjct: 181 RGEAKKAYEEALNIEPRLSKAREALERLSSS 211

[Close]

BLAST of PI0014639.1 vs. TAIR 10
Match: AT5G65520.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 146.4 bits (368), Expect = 2.7e-35
Identity = 90/201 (44.78%), Postives = 135/201 (67.16%), Query Frame = 0


Query: 3   TDILLQIALILVMVVMFLAMHNIPQRYFAKLRLRFRSNVESKRHFVRGAQLLARARSAPS 62
           T+ ++Q A++++ +VMF A+  + QR   K R + R+ ++++R  ++ ++LLARAR+ P 
Sbjct: 4   TETIIQGAILVLTLVMFWAIKYLSQRGLTKFRTKHRATLQTQRQLIQASRLLARARTTPK 63

Query: 63  RSSATSLAVEVVAEADKAIALDPKDAAAHILKALALDIQGFKTSALESLDTALSPLVAKS 122
           +S + SLA   + EAD  IA+ P DAA HI++ALALD+ G  TSAL+S D AL+    KS
Sbjct: 64  KSQSQSLAKTALTEADNVIAISPDDAAGHIVRALALDLLGHHTSALKSFDMALTYPRLKS 123

Query: 123 LSDEERGDALFKRAELKMSTNRRALVDSALADLTESVTLSR---NAKSYYWLGKCYETKK 182
           LS  ER DAL KRAE+K++ NRR  +DSA+ DL E+V L+     A+ +  LG+CYE K 
Sbjct: 124 LSVGERADALVKRAEMKLAVNRRRRIDSAVEDLEEAVRLAAGTDTARLFRLLGECYEFKG 183

Query: 183 LREEAKKAYEEALNIEPRLSN 201
           L+E+A+ A+ EAL  +P   N
Sbjct: 184 LKEKAQWAFNEALKAQPSSVN 204

The following BLAST results are available for this feature:

BLAST of PI0014639.1 vs.


Match Name	E-value	Identity	Description

BLAST of PI0014639.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LPL8	8.0e-96	96.68	TPR_REGION domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G370460 ...	[more]
A0A5A7VBU3	1.4e-95	96.21	TPR domain protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold82G00...	[more]
A0A1S3BC86	1.4e-95	96.21	uncharacterized protein LOC103488119 OS=Cucumis melo OX=3656 GN=LOC103488119 PE=...	[more]
A0A6J1GK03	9.4e-89	90.52	uncharacterized protein LOC111454602 OS=Cucurbita moschata OX=3662 GN=LOC1114546...	[more]
A0A6J1KRQ5	1.2e-88	90.05	uncharacterized protein LOC111496615 OS=Cucurbita maxima OX=3661 GN=LOC111496615...	[more]

BLAST of PI0014639.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004152601.1	1.6e-95	96.68	uncharacterized protein LOC101214199 [Cucumis sativus] >KGN62747.1 hypothetical ...	[more]
XP_008444918.1	2.8e-95	96.21	PREDICTED: uncharacterized protein LOC103488119 [Cucumis melo] >KAA0065098.1 TPR...	[more]
XP_038884950.1	1.1e-94	96.21	uncharacterized protein LOC120075535 [Benincasa hispida]	[more]
XP_023537835.1	6.7e-89	91.00	uncharacterized protein LOC111798743 [Cucurbita pepo subsp. pepo]	[more]
XP_022951869.1	2.0e-88	90.52	uncharacterized protein LOC111454602 [Cucurbita moschata] >KAG6585344.1 hypothet...	[more]

BLAST of PI0014639.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G65520.1	2.7e-35	44.78	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 67..210 e-value: 3.9E-16 score: 61.2
IPR011990	Tetratricopeptide-like helical domain superfamily	SUPERFAMILY	48452	TPR-like	coord: 78..206
IPR019734	Tetratricopeptide repeat	PFAM	PF13181	TPR_8	coord: 165..196 e-value: 4.5E-7 score: 29.6
IPR019734	Tetratricopeptide repeat	PROSITE	PS50005	TPR	coord: 165..198 score: 10.5909
None	No IPR available	PANTHER	PTHR26312	TETRATRICOPEPTIDE REPEAT PROTEIN 5	coord: 4..208
None	No IPR available	PANTHER	PTHR26312:SF163	SUBFAMILY NOT NAMED	coord: 4..208

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
PI0014639	PI0014639	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
PI0014639.1-exon	PI0014639.1-exon-chr03:2924814..2925253	exon
PI0014639.1-exon	PI0014639.1-exon-chr03:2925606..2926530	exon

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
PI0014639.1-three_prime_utr	PI0014639.1-three_prime_utr-chr03:2924814..2925253	three_prime_UTR
PI0014639.1-three_prime_utr	PI0014639.1-three_prime_utr-chr03:2925606..2925676	three_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
PI0014639.1-cds	PI0014639.1-cds-chr03:2925677..2926312	CDS

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
PI0014639.1-five_prime_utr	PI0014639.1-five_prime_utr-chr03:2926313..2926530	five_prime_UTR

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
PI0014639.1	PI0014639.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0005515	protein binding
molecular_function	GO:0016740	transferase activity