PI0013886.1 (mRNA) Melon (PI 482460) v1

Overview


Name	PI0013886.1
Type	mRNA
Organism	Cucumis metuliferus (Melon (PI 482460) v1)
Description	YqaJ domain-containing protein
Location	chr01: 16522431 .. 16523927 (+)
Sequence length	891
RNA-Seq Expression	PI0013886.1
Synteny	PI0013886.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTTTGTGCTTCCAAGGGTATTTTGGTCATTTGAGAATACCCTTTGTTTTGAAATTTAAAAACAAAAACCAACGATCTTGGTGACGATCACGACCGAGAAATTATGTTGAGATGATTTTTTAAAATTTGAAAAGAATCTCGGTGTCGAAGTCGGCCGAGATTGACCGAGAAAAACAATTTTACGAGTTTTCTAAAAACGTGCTACTTTTGAAATATAAAATCAGAAGTGTGCTACTCCTCAAAATTTCTCCAAAAAATGTGCTATGTTAAACCCAAAACCGGCGGTTTTGGACAATTCCCCCAATTAATTTTTCTAATTTATTTGGTTAAAAAAGAAAAACAAAGTAATACTGTACCCATGGTTTAGTAATTTTCAGCCCAAACCCAAAATTTAGGGTTTTTTTTTCCACAAATTGAAAGTCGAGCTGGAGCTCCCACCCCCGCCATTGTTAAGGTAAGAAACTTACCTTGTAATCCTTCTTTCTTCATCAGTTGTAGGGCTTTCACTTGTGCTTCCAGGTGTTCTAGTTAATGAGTAATTCAAGATTTATCTTCATCTGAATTGAAATTTTCATAGTTTCTTTGGGTTCGTTTAATTTCAGTAACCATCAATGTTCAATTGCAAAAAGATATTATTTGCCTGTACTCAAGCTATTGGGAACTGTTTGATACGCAATTTCAATTCTGTTTCTTCTTCTTCTTTACAATTTGAAACGGGTAATCACTATTCTGTTCTTCAGTCCAGTAGTTTTCAGCATTGGTTCAAAAATTGGCAAGAGCTTCGAAAGCATAAGTTAACCGCAAGTACTTTTGCTGGGGCAGTTGGGTTTTGGCCTCGTCGAAGGGCTCAATTATGGTTGGAGAAACTTGGGGCAATTGATCAATTTTGTGGTAATCTTGCTACTTGTTGGAGTAATATGAAAGAAGAAGAAGCACTTGAAAGATACAAGCTTATTACTGGAAACTCTGTTTTGTTTCCTGAATTTCAAGTCTATGGTAAAGCGAACTCGGAAGATGATTGGTTGGCTGCTTCACCTGATGGGGCAATTGATAAAATGTTTTATGGATTGCCTTCACGAGGTGTGTTGGAGATTAAGTGCCCATTTTTTAATGGTGATATGAGAAATGCTTCACCATGGTCACGAGTTCCTCTTTACTGTATTCCTCAGGCTCAAGGTTTGATGGAAATAATGGATAGAGATTGGATGGACTTTTATGTTTGGACTCCTAATGGTAGTAGTTTGTTTAGATTGTATCGAGATGTTGAATATTGGGACGTCTTGAAGATTGCTTTGTCGGATTTTTGGTGGAAGCATGTTCAACCTGCAAGGGAGATATGTAGTAAATCTGTCGTTACAAATCCCCTCATTGAGCTTAAGTCTCTTAGGCCATCACCCAGGCATGAACTGTGTAGTTATATAGTTTGTGAGAGCAGACGGGTTGTCAATAATTCTAAGTTGCTCTTGCGTGAATTTGATGGGAGACTTCAAACCTAA

mRNA sequence

ATGTTTGTGCTTCCAAGGGTATTTTGGTCATTTGAGAATACCCTTTCTATTGGGAACTGTTTGATACGCAATTTCAATTCTGTTTCTTCTTCTTCTTTACAATTTGAAACGGGTAATCACTATTCTGTTCTTCAGTCCAGTAGTTTTCAGCATTGGTTCAAAAATTGGCAAGAGCTTCGAAAGCATAAGTTAACCGCAAGTACTTTTGCTGGGGCAGTTGGGTTTTGGCCTCGTCGAAGGGCTCAATTATGGTTGGAGAAACTTGGGGCAATTGATCAATTTTGTGGTAATCTTGCTACTTGTTGGAGTAATATGAAAGAAGAAGAAGCACTTGAAAGATACAAGCTTATTACTGGAAACTCTGTTTTGTTTCCTGAATTTCAAGTCTATGGTAAAGCGAACTCGGAAGATGATTGGTTGGCTGCTTCACCTGATGGGGCAATTGATAAAATGTTTTATGGATTGCCTTCACGAGGTGTGTTGGAGATTAAGTGCCCATTTTTTAATGGTGATATGAGAAATGCTTCACCATGGTCACGAGTTCCTCTTTACTGTATTCCTCAGGCTCAAGGTTTGATGGAAATAATGGATAGAGATTGGATGGACTTTTATGTTTGGACTCCTAATGGTAGTAGTTTGTTTAGATTGTATCGAGATGTTGAATATTGGGACGTCTTGAAGATTGCTTTGTCGGATTTTTGGTGGAAGCATGTTCAACCTGCAAGGGAGATATGTAGTAAATCTGTCGTTACAAATCCCCTCATTGAGCTTAAGTCTCTTAGGCCATCACCCAGGCATGAACTGTGTAGTTATATAGTTTGTGAGAGCAGACGGGTTGTCAATAATTCTAAGTTGCTCTTGCGTGAATTTGATGGGAGACTTCAAACCTAA

Coding sequence (CDS)

ATGTTTGTGCTTCCAAGGGTATTTTGGTCATTTGAGAATACCCTTTCTATTGGGAACTGTTTGATACGCAATTTCAATTCTGTTTCTTCTTCTTCTTTACAATTTGAAACGGGTAATCACTATTCTGTTCTTCAGTCCAGTAGTTTTCAGCATTGGTTCAAAAATTGGCAAGAGCTTCGAAAGCATAAGTTAACCGCAAGTACTTTTGCTGGGGCAGTTGGGTTTTGGCCTCGTCGAAGGGCTCAATTATGGTTGGAGAAACTTGGGGCAATTGATCAATTTTGTGGTAATCTTGCTACTTGTTGGAGTAATATGAAAGAAGAAGAAGCACTTGAAAGATACAAGCTTATTACTGGAAACTCTGTTTTGTTTCCTGAATTTCAAGTCTATGGTAAAGCGAACTCGGAAGATGATTGGTTGGCTGCTTCACCTGATGGGGCAATTGATAAAATGTTTTATGGATTGCCTTCACGAGGTGTGTTGGAGATTAAGTGCCCATTTTTTAATGGTGATATGAGAAATGCTTCACCATGGTCACGAGTTCCTCTTTACTGTATTCCTCAGGCTCAAGGTTTGATGGAAATAATGGATAGAGATTGGATGGACTTTTATGTTTGGACTCCTAATGGTAGTAGTTTGTTTAGATTGTATCGAGATGTTGAATATTGGGACGTCTTGAAGATTGCTTTGTCGGATTTTTGGTGGAAGCATGTTCAACCTGCAAGGGAGATATGTAGTAAATCTGTCGTTACAAATCCCCTCATTGAGCTTAAGTCTCTTAGGCCATCACCCAGGCATGAACTGTGTAGTTATATAGTTTGTGAGAGCAGACGGGTTGTCAATAATTCTAAGTTGCTCTTGCGTGAATTTGATGGGAGACTTCAAACCTAA

Protein sequence

MFVLPRVFWSFENTLSIGNCLIRNFNSVSSSSLQFETGNHYSVLQSSSFQHWFKNWQELRKHKLTASTFAGAVGFWPRRRAQLWLEKLGAIDQFCGNLATCWSNMKEEEALERYKLITGNSVLFPEFQVYGKANSEDDWLAASPDGAIDKMFYGLPSRGVLEIKCPFFNGDMRNASPWSRVPLYCIPQAQGLMEIMDRDWMDFYVWTPNGSSLFRLYRDVEYWDVLKIALSDFWWKHVQPAREICSKSVVTNPLIELKSLRPSPRHELCSYIVCESRRVVNNSKLLLREFDGRLQT

Homology

[Close]

BLAST of PI0013886.1 vs. ExPASy TrEMBL
Match: A0A0A0K4T5 (YqaJ domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G302370 PE=4 SV=1)

HSP 1 Score: 583.6 bits (1503), Expect = 4.8e-163
Identity = 272/286 (95.10%), Postives = 278/286 (97.20%), Query Frame = 0


Query: 11  FENTLSIGNCLIRNFNSVSSSSLQFETGNHYSVLQSSSFQHWFKNWQELRKHKLTASTFA 70
           F  + +IGNC IRNFNSVSSSSLQFET NHYSVLQS+SFQHWFKNWQELRKHKLTASTFA
Sbjct: 17  FACSQAIGNCSIRNFNSVSSSSLQFETVNHYSVLQSTSFQHWFKNWQELRKHKLTASTFA 76

Query: 71  GAVGFWPRRRAQLWLEKLGAIDQFCGNLATCWSNMKEEEALERYKLITGNSVLFPEFQVY 130
           GA+GFWPRRR QLWLEKLGAIDQFCGNLATCWSNMKEEEALERYKLITGNSVLFPEFQVY
Sbjct: 77  GAIGFWPRRRTQLWLEKLGAIDQFCGNLATCWSNMKEEEALERYKLITGNSVLFPEFQVY 136

Query: 131 GKANSEDDWLAASPDGAIDKMFYGLPSRGVLEIKCPFFNGDMRNASPWSRVPLYCIPQAQ 190
           GKANSEDDWLAASPDGAIDKM YGLPSRGVLEIKCPFFNGDMRNASPWSRVPLYCIPQAQ
Sbjct: 137 GKANSEDDWLAASPDGAIDKMVYGLPSRGVLEIKCPFFNGDMRNASPWSRVPLYCIPQAQ 196

Query: 191 GLMEIMDRDWMDFYVWTPNGSSLFRLYRDVEYWDVLKIALSDFWWKHVQPAREICSKSVV 250
           GLMEIMDRDWMDFYVWTPNGSSLFRLYRDVEYWDVLKIALSDFWWKHVQPARE+CSK VV
Sbjct: 197 GLMEIMDRDWMDFYVWTPNGSSLFRLYRDVEYWDVLKIALSDFWWKHVQPAREMCSKYVV 256

Query: 251 TNPLIELKSLRPSPRHELCSYIVCESRRVVNNSKLLLREFDGRLQT 297
           TNPLIELKSLRPSPRHELCSYIVCES+RVVNNSKLLLREFDGRLQT
Sbjct: 257 TNPLIELKSLRPSPRHELCSYIVCESKRVVNNSKLLLREFDGRLQT 302

[Close]

BLAST of PI0013886.1 vs. ExPASy TrEMBL
Match: A0A1S3C4M6 (uncharacterized protein LOC103496427 OS=Cucumis melo OX=3656 GN=LOC103496427 PE=4 SV=1)

HSP 1 Score: 577.8 bits (1488), Expect = 2.6e-161
Identity = 269/286 (94.06%), Postives = 275/286 (96.15%), Query Frame = 0


Query: 11  FENTLSIGNCLIRNFNSVSSSSLQFETGNHYSVLQSSSFQHWFKNWQELRKHKLTASTFA 70
           F  + +IGNC IRNFNSVS SSLQFETGNHYSVLQSSSFQHWFKNWQELRKHKLTASTFA
Sbjct: 9   FACSQAIGNCSIRNFNSVSFSSLQFETGNHYSVLQSSSFQHWFKNWQELRKHKLTASTFA 68

Query: 71  GAVGFWPRRRAQLWLEKLGAIDQFCGNLATCWSNMKEEEALERYKLITGNSVLFPEFQVY 130
           GA+GFWPRRRAQLWLEKLGAI+ FCGNLATCWSNMKEEEALERYKLITGNSVLFPEFQVY
Sbjct: 69  GAIGFWPRRRAQLWLEKLGAIEPFCGNLATCWSNMKEEEALERYKLITGNSVLFPEFQVY 128

Query: 131 GKANSEDDWLAASPDGAIDKMFYGLPSRGVLEIKCPFFNGDMRNASPWSRVPLYCIPQAQ 190
           GKANSEDDWLAASPDGAIDKM YGLPSRGVLEIKCPFFNGDMRNASPWS+VP YCIPQAQ
Sbjct: 129 GKANSEDDWLAASPDGAIDKMVYGLPSRGVLEIKCPFFNGDMRNASPWSQVPRYCIPQAQ 188

Query: 191 GLMEIMDRDWMDFYVWTPNGSSLFRLYRDVEYWDVLKIALSDFWWKHVQPAREICSKSVV 250
           GLMEIMDRDWMDFYVWTPNGSSLFRLYRD EYWDVLKIALSDFWWKHVQPAREICSK V+
Sbjct: 189 GLMEIMDRDWMDFYVWTPNGSSLFRLYRDPEYWDVLKIALSDFWWKHVQPAREICSKYVI 248

Query: 251 TNPLIELKSLRPSPRHELCSYIVCESRRVVNNSKLLLREFDGRLQT 297
           TNPLIELKS RPSPRHELCSYIVCESRRVVNNSKLLLREFDGRLQT
Sbjct: 249 TNPLIELKSFRPSPRHELCSYIVCESRRVVNNSKLLLREFDGRLQT 294

[Close]

BLAST of PI0013886.1 vs. ExPASy TrEMBL
Match: A0A5A7SZ18 (DNA-directed RNA polymerase subunit beta OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold360G00600 PE=4 SV=1)

HSP 1 Score: 577.8 bits (1488), Expect = 2.6e-161
Identity = 269/286 (94.06%), Postives = 275/286 (96.15%), Query Frame = 0


Query: 11  FENTLSIGNCLIRNFNSVSSSSLQFETGNHYSVLQSSSFQHWFKNWQELRKHKLTASTFA 70
           F  + +IGNC IRNFNSVS SSLQFETGNHYSVLQSSSFQHWFKNWQELRKHKLTASTFA
Sbjct: 9   FACSQAIGNCSIRNFNSVSFSSLQFETGNHYSVLQSSSFQHWFKNWQELRKHKLTASTFA 68

Query: 71  GAVGFWPRRRAQLWLEKLGAIDQFCGNLATCWSNMKEEEALERYKLITGNSVLFPEFQVY 130
           GA+GFWPRRRAQLWLEKLGAI+ FCGNLATCWSNMKEEEALERYKLITGNSVLFPEFQVY
Sbjct: 69  GAIGFWPRRRAQLWLEKLGAIEPFCGNLATCWSNMKEEEALERYKLITGNSVLFPEFQVY 128

Query: 131 GKANSEDDWLAASPDGAIDKMFYGLPSRGVLEIKCPFFNGDMRNASPWSRVPLYCIPQAQ 190
           GKANSEDDWLAASPDGAIDKM YGLPSRGVLEIKCPFFNGDMRNASPWS+VP YCIPQAQ
Sbjct: 129 GKANSEDDWLAASPDGAIDKMVYGLPSRGVLEIKCPFFNGDMRNASPWSQVPRYCIPQAQ 188

Query: 191 GLMEIMDRDWMDFYVWTPNGSSLFRLYRDVEYWDVLKIALSDFWWKHVQPAREICSKSVV 250
           GLMEIMDRDWMDFYVWTPNGSSLFRLYRD EYWDVLKIALSDFWWKHVQPAREICSK V+
Sbjct: 189 GLMEIMDRDWMDFYVWTPNGSSLFRLYRDPEYWDVLKIALSDFWWKHVQPAREICSKYVI 248

Query: 251 TNPLIELKSLRPSPRHELCSYIVCESRRVVNNSKLLLREFDGRLQT 297
           TNPLIELKS RPSPRHELCSYIVCESRRVVNNSKLLLREFDGRLQT
Sbjct: 249 TNPLIELKSFRPSPRHELCSYIVCESRRVVNNSKLLLREFDGRLQT 294

[Close]

BLAST of PI0013886.1 vs. ExPASy TrEMBL
Match: A0A0A0KG47 (YqaJ domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G405910 PE=4 SV=1)

HSP 1 Score: 576.2 bits (1484), Expect = 7.6e-161
Identity = 266/286 (93.01%), Postives = 275/286 (96.15%), Query Frame = 0


Query: 11  FENTLSIGNCLIRNFNSVSSSSLQFETGNHYSVLQSSSFQHWFKNWQELRKHKLTASTFA 70
           F  + +IGNC +RNFNSVS SSLQFETGNHYSVLQSSSFQHWFKNWQELRKHKLTASTFA
Sbjct: 9   FACSQAIGNCSLRNFNSVSFSSLQFETGNHYSVLQSSSFQHWFKNWQELRKHKLTASTFA 68

Query: 71  GAVGFWPRRRAQLWLEKLGAIDQFCGNLATCWSNMKEEEALERYKLITGNSVLFPEFQVY 130
           GA+GFWPRRR QLWLEKLGAIDQFCGNLATCWSNMKEEEALERYKLITGNSVLFPEFQVY
Sbjct: 69  GAIGFWPRRRTQLWLEKLGAIDQFCGNLATCWSNMKEEEALERYKLITGNSVLFPEFQVY 128

Query: 131 GKANSEDDWLAASPDGAIDKMFYGLPSRGVLEIKCPFFNGDMRNASPWSRVPLYCIPQAQ 190
           GKANSEDDWLAASPDGAIDKM YGLPSRGVLEIKCPFFNGD+RNA PWSRVP YCIPQAQ
Sbjct: 129 GKANSEDDWLAASPDGAIDKMVYGLPSRGVLEIKCPFFNGDLRNALPWSRVPRYCIPQAQ 188

Query: 191 GLMEIMDRDWMDFYVWTPNGSSLFRLYRDVEYWDVLKIALSDFWWKHVQPAREICSKSVV 250
           GLMEIMDRDWMDFYVWTPNGSSLFRLYRD EYWDVLKIALSDFWWKHVQPARE+CSK V+
Sbjct: 189 GLMEIMDRDWMDFYVWTPNGSSLFRLYRDPEYWDVLKIALSDFWWKHVQPAREMCSKYVI 248

Query: 251 TNPLIELKSLRPSPRHELCSYIVCESRRVVNNSKLLLREFDGRLQT 297
           TNPL+ELKSLRPSPRHELCSYIVCES+RVVNNSKLLLREFDGRLQT
Sbjct: 249 TNPLVELKSLRPSPRHELCSYIVCESKRVVNNSKLLLREFDGRLQT 294

[Close]

BLAST of PI0013886.1 vs. ExPASy TrEMBL
Match: A0A6J1J2F9 (uncharacterized protein LOC111480647 OS=Cucurbita maxima OX=3661 GN=LOC111480647 PE=4 SV=1)

HSP 1 Score: 534.6 bits (1376), Expect = 2.5e-148
Identity = 251/288 (87.15%), Postives = 265/288 (92.01%), Query Frame = 0


Query: 11  FENTLSIGNCLIRNFNSV--SSSSLQFETGNHYSVLQSSSFQHWFKNWQELRKHKLTAST 70
           F  T +I N    NFNS   SSSS +FETGN+YSVLQSSSFQHWFKNW+ELRKHKLTAST
Sbjct: 8   FARTQTIRNWSRCNFNSASSSSSSFKFETGNYYSVLQSSSFQHWFKNWKELRKHKLTAST 67

Query: 71  FAGAVGFWPRRRAQLWLEKLGAIDQFCGNLATCWSNMKEEEALERYKLITGNSVLFPEFQ 130
           FAGA+GFWPRRRAQLWLEKLGAIDQF GNLATCWSNMKEEEALERYKLITGNSVLFPEFQ
Sbjct: 68  FAGAIGFWPRRRAQLWLEKLGAIDQFSGNLATCWSNMKEEEALERYKLITGNSVLFPEFQ 127

Query: 131 VYGKANSEDDWLAASPDGAIDKMFYGLPSRGVLEIKCPFFNGDMRNASPWSRVPLYCIPQ 190
           VYGK NSE DWLAASPDGAIDKM YGLPSRGVLEIKCPFF+GDM  ASPWSRVPLYCIPQ
Sbjct: 128 VYGKGNSEYDWLAASPDGAIDKMVYGLPSRGVLEIKCPFFDGDMEKASPWSRVPLYCIPQ 187

Query: 191 AQGLMEIMDRDWMDFYVWTPNGSSLFRLYRDVEYWDVLKIALSDFWWKHVQPAREICSKS 250
            QGLMEIMDRDWMDFYVWTP GSSLFRLYRD EYW+VLKIALSDFWWKHVQPARE+CSK 
Sbjct: 188 VQGLMEIMDRDWMDFYVWTPKGSSLFRLYRDAEYWEVLKIALSDFWWKHVQPAREMCSKY 247

Query: 251 VVTNPLIELKSLRPSPRHELCSYIVCESRRVVNNSKLLLREFDGRLQT 297
            +TNPLIELKSLRPSP+HELCSYIVCES+RVV+NS+LLLREF+GRLQT
Sbjct: 248 SITNPLIELKSLRPSPKHELCSYIVCESKRVVDNSELLLREFNGRLQT 295

[Close]

BLAST of PI0013886.1 vs. NCBI nr
Match: XP_011659114.2 (uncharacterized protein LOC101215512 [Cucumis sativus] >KAE8646186.1 hypothetical protein Csa_015911 [Cucumis sativus])

HSP 1 Score: 583.6 bits (1503), Expect = 9.8e-163
Identity = 272/286 (95.10%), Postives = 278/286 (97.20%), Query Frame = 0


Query: 11  FENTLSIGNCLIRNFNSVSSSSLQFETGNHYSVLQSSSFQHWFKNWQELRKHKLTASTFA 70
           F  + +IGNC IRNFNSVSSSSLQFET NHYSVLQS+SFQHWFKNWQELRKHKLTASTFA
Sbjct: 9   FACSQAIGNCSIRNFNSVSSSSLQFETVNHYSVLQSTSFQHWFKNWQELRKHKLTASTFA 68

Query: 71  GAVGFWPRRRAQLWLEKLGAIDQFCGNLATCWSNMKEEEALERYKLITGNSVLFPEFQVY 130
           GA+GFWPRRR QLWLEKLGAIDQFCGNLATCWSNMKEEEALERYKLITGNSVLFPEFQVY
Sbjct: 69  GAIGFWPRRRVQLWLEKLGAIDQFCGNLATCWSNMKEEEALERYKLITGNSVLFPEFQVY 128

Query: 131 GKANSEDDWLAASPDGAIDKMFYGLPSRGVLEIKCPFFNGDMRNASPWSRVPLYCIPQAQ 190
           GKANSEDDWLAASPDGAIDKM YGLPS+GVLEIKCPFFNGDMRNASPWSRVPLYCIPQAQ
Sbjct: 129 GKANSEDDWLAASPDGAIDKMIYGLPSQGVLEIKCPFFNGDMRNASPWSRVPLYCIPQAQ 188

Query: 191 GLMEIMDRDWMDFYVWTPNGSSLFRLYRDVEYWDVLKIALSDFWWKHVQPAREICSKSVV 250
           GLMEIMDRDWMDFYVWTPNGSSLFRLYRDVEYWDVLKIALSDFWWKHVQPARE+CSK VV
Sbjct: 189 GLMEIMDRDWMDFYVWTPNGSSLFRLYRDVEYWDVLKIALSDFWWKHVQPAREMCSKYVV 248

Query: 251 TNPLIELKSLRPSPRHELCSYIVCESRRVVNNSKLLLREFDGRLQT 297
           TNPLIELKSLRPSPRHELCSYIVCESRRVVNNSKLLLREFDGRLQT
Sbjct: 249 TNPLIELKSLRPSPRHELCSYIVCESRRVVNNSKLLLREFDGRLQT 294

[Close]

BLAST of PI0013886.1 vs. NCBI nr
Match: XP_008456487.1 (PREDICTED: uncharacterized protein LOC103496427 [Cucumis melo] >XP_016901977.1 PREDICTED: uncharacterized protein LOC103496427 [Cucumis melo] >KAA0036472.1 DNA-directed RNA polymerase subunit beta' [Cucumis melo var. makuwa] >TYK00015.1 DNA-directed RNA polymerase subunit beta' [Cucumis melo var. makuwa])

HSP 1 Score: 577.8 bits (1488), Expect = 5.4e-161
Identity = 269/286 (94.06%), Postives = 275/286 (96.15%), Query Frame = 0


Query: 11  FENTLSIGNCLIRNFNSVSSSSLQFETGNHYSVLQSSSFQHWFKNWQELRKHKLTASTFA 70
           F  + +IGNC IRNFNSVS SSLQFETGNHYSVLQSSSFQHWFKNWQELRKHKLTASTFA
Sbjct: 9   FACSQAIGNCSIRNFNSVSFSSLQFETGNHYSVLQSSSFQHWFKNWQELRKHKLTASTFA 68

Query: 71  GAVGFWPRRRAQLWLEKLGAIDQFCGNLATCWSNMKEEEALERYKLITGNSVLFPEFQVY 130
           GA+GFWPRRRAQLWLEKLGAI+ FCGNLATCWSNMKEEEALERYKLITGNSVLFPEFQVY
Sbjct: 69  GAIGFWPRRRAQLWLEKLGAIEPFCGNLATCWSNMKEEEALERYKLITGNSVLFPEFQVY 128

Query: 131 GKANSEDDWLAASPDGAIDKMFYGLPSRGVLEIKCPFFNGDMRNASPWSRVPLYCIPQAQ 190
           GKANSEDDWLAASPDGAIDKM YGLPSRGVLEIKCPFFNGDMRNASPWS+VP YCIPQAQ
Sbjct: 129 GKANSEDDWLAASPDGAIDKMVYGLPSRGVLEIKCPFFNGDMRNASPWSQVPRYCIPQAQ 188

Query: 191 GLMEIMDRDWMDFYVWTPNGSSLFRLYRDVEYWDVLKIALSDFWWKHVQPAREICSKSVV 250
           GLMEIMDRDWMDFYVWTPNGSSLFRLYRD EYWDVLKIALSDFWWKHVQPAREICSK V+
Sbjct: 189 GLMEIMDRDWMDFYVWTPNGSSLFRLYRDPEYWDVLKIALSDFWWKHVQPAREICSKYVI 248

Query: 251 TNPLIELKSLRPSPRHELCSYIVCESRRVVNNSKLLLREFDGRLQT 297
           TNPLIELKS RPSPRHELCSYIVCESRRVVNNSKLLLREFDGRLQT
Sbjct: 249 TNPLIELKSFRPSPRHELCSYIVCESRRVVNNSKLLLREFDGRLQT 294

[Close]

BLAST of PI0013886.1 vs. NCBI nr
Match: XP_031742491.1 (uncharacterized protein LOC101207616 [Cucumis sativus] >KGN47829.1 hypothetical protein Csa_003052 [Cucumis sativus])

HSP 1 Score: 576.2 bits (1484), Expect = 1.6e-160
Identity = 266/286 (93.01%), Postives = 275/286 (96.15%), Query Frame = 0


Query: 11  FENTLSIGNCLIRNFNSVSSSSLQFETGNHYSVLQSSSFQHWFKNWQELRKHKLTASTFA 70
           F  + +IGNC +RNFNSVS SSLQFETGNHYSVLQSSSFQHWFKNWQELRKHKLTASTFA
Sbjct: 9   FACSQAIGNCSLRNFNSVSFSSLQFETGNHYSVLQSSSFQHWFKNWQELRKHKLTASTFA 68

Query: 71  GAVGFWPRRRAQLWLEKLGAIDQFCGNLATCWSNMKEEEALERYKLITGNSVLFPEFQVY 130
           GA+GFWPRRR QLWLEKLGAIDQFCGNLATCWSNMKEEEALERYKLITGNSVLFPEFQVY
Sbjct: 69  GAIGFWPRRRTQLWLEKLGAIDQFCGNLATCWSNMKEEEALERYKLITGNSVLFPEFQVY 128

Query: 131 GKANSEDDWLAASPDGAIDKMFYGLPSRGVLEIKCPFFNGDMRNASPWSRVPLYCIPQAQ 190
           GKANSEDDWLAASPDGAIDKM YGLPSRGVLEIKCPFFNGD+RNA PWSRVP YCIPQAQ
Sbjct: 129 GKANSEDDWLAASPDGAIDKMVYGLPSRGVLEIKCPFFNGDLRNALPWSRVPRYCIPQAQ 188

Query: 191 GLMEIMDRDWMDFYVWTPNGSSLFRLYRDVEYWDVLKIALSDFWWKHVQPAREICSKSVV 250
           GLMEIMDRDWMDFYVWTPNGSSLFRLYRD EYWDVLKIALSDFWWKHVQPARE+CSK V+
Sbjct: 189 GLMEIMDRDWMDFYVWTPNGSSLFRLYRDPEYWDVLKIALSDFWWKHVQPAREMCSKYVI 248

Query: 251 TNPLIELKSLRPSPRHELCSYIVCESRRVVNNSKLLLREFDGRLQT 297
           TNPL+ELKSLRPSPRHELCSYIVCES+RVVNNSKLLLREFDGRLQT
Sbjct: 249 TNPLVELKSLRPSPRHELCSYIVCESKRVVNNSKLLLREFDGRLQT 294

[Close]

BLAST of PI0013886.1 vs. NCBI nr
Match: XP_038900094.1 (uncharacterized protein LOC120087241 [Benincasa hispida] >XP_038900095.1 uncharacterized protein LOC120087241 [Benincasa hispida])

HSP 1 Score: 556.2 bits (1432), Expect = 1.7e-154
Identity = 258/286 (90.21%), Postives = 271/286 (94.76%), Query Frame = 0


Query: 11  FENTLSIGNCLIRNFNS-VSSSSLQFETGNHYSVLQSSSFQHWFKNWQELRKHKLTASTF 70
           F  + +IGN  IRNFNS  SSS+L+FETGNHYS+LQSSSFQHWFKNW ELRKHKLTASTF
Sbjct: 8   FACSQAIGNWSIRNFNSAASSSALKFETGNHYSILQSSSFQHWFKNWNELRKHKLTASTF 67

Query: 71  AGAVGFWPRRRAQLWLEKLGAIDQFCGNLATCWSNMKEEEALERYKLITGNSVLFPEFQV 130
           AGA+GFWPRRRAQLWLEKLGAIDQFCGNLATCWSNMKEEEALERYKLITGNSVLFPEFQV
Sbjct: 68  AGAIGFWPRRRAQLWLEKLGAIDQFCGNLATCWSNMKEEEALERYKLITGNSVLFPEFQV 127

Query: 131 YGKANSEDDWLAASPDGAIDKMFYGLPSRGVLEIKCPFFNGDMRNASPWSRVPLYCIPQA 190
           YGKANS DDWLAASPDGAIDKM YGLPSRGVLEIKCPFF+GDMR ASPWSR+PLYCIPQA
Sbjct: 128 YGKANSVDDWLAASPDGAIDKMIYGLPSRGVLEIKCPFFDGDMRKASPWSRIPLYCIPQA 187

Query: 191 QGLMEIMDRDWMDFYVWTPNGSSLFRLYRDVEYWDVLKIALSDFWWKHVQPAREICSKSV 250
           QGLMEIMDRDWMDFYVWTP GSSLFRLYRDVEYWDVLKIALSDFWWKHVQPARE+CSK  
Sbjct: 188 QGLMEIMDRDWMDFYVWTPKGSSLFRLYRDVEYWDVLKIALSDFWWKHVQPAREMCSKYA 247

Query: 251 VTNPLIELKSLRPSPRHELCSYIVCESRRVVNNSKLLLREFDGRLQ 296
           + NPLIELKSLRPSP+HELCSYIVCES+RVV+NSKLLLREFDGRLQ
Sbjct: 248 INNPLIELKSLRPSPKHELCSYIVCESKRVVDNSKLLLREFDGRLQ 293

[Close]

BLAST of PI0013886.1 vs. NCBI nr
Match: XP_022981568.1 (uncharacterized protein LOC111480647 [Cucurbita maxima])

HSP 1 Score: 534.6 bits (1376), Expect = 5.2e-148
Identity = 251/288 (87.15%), Postives = 265/288 (92.01%), Query Frame = 0


Query: 11  FENTLSIGNCLIRNFNSV--SSSSLQFETGNHYSVLQSSSFQHWFKNWQELRKHKLTAST 70
           F  T +I N    NFNS   SSSS +FETGN+YSVLQSSSFQHWFKNW+ELRKHKLTAST
Sbjct: 8   FARTQTIRNWSRCNFNSASSSSSSFKFETGNYYSVLQSSSFQHWFKNWKELRKHKLTAST 67

Query: 71  FAGAVGFWPRRRAQLWLEKLGAIDQFCGNLATCWSNMKEEEALERYKLITGNSVLFPEFQ 130
           FAGA+GFWPRRRAQLWLEKLGAIDQF GNLATCWSNMKEEEALERYKLITGNSVLFPEFQ
Sbjct: 68  FAGAIGFWPRRRAQLWLEKLGAIDQFSGNLATCWSNMKEEEALERYKLITGNSVLFPEFQ 127

Query: 131 VYGKANSEDDWLAASPDGAIDKMFYGLPSRGVLEIKCPFFNGDMRNASPWSRVPLYCIPQ 190
           VYGK NSE DWLAASPDGAIDKM YGLPSRGVLEIKCPFF+GDM  ASPWSRVPLYCIPQ
Sbjct: 128 VYGKGNSEYDWLAASPDGAIDKMVYGLPSRGVLEIKCPFFDGDMEKASPWSRVPLYCIPQ 187

Query: 191 AQGLMEIMDRDWMDFYVWTPNGSSLFRLYRDVEYWDVLKIALSDFWWKHVQPAREICSKS 250
            QGLMEIMDRDWMDFYVWTP GSSLFRLYRD EYW+VLKIALSDFWWKHVQPARE+CSK 
Sbjct: 188 VQGLMEIMDRDWMDFYVWTPKGSSLFRLYRDAEYWEVLKIALSDFWWKHVQPAREMCSKY 247

Query: 251 VVTNPLIELKSLRPSPRHELCSYIVCESRRVVNNSKLLLREFDGRLQT 297
            +TNPLIELKSLRPSP+HELCSYIVCES+RVV+NS+LLLREF+GRLQT
Sbjct: 248 SITNPLIELKSLRPSPKHELCSYIVCESKRVVDNSELLLREFNGRLQT 295

[Close]

BLAST of PI0013886.1 vs. TAIR 10
Match: AT1G13810.1 (Restriction endonuclease, type II-like superfamily protein )

HSP 1 Score: 275.4 bits (703), Expect = 5.3e-74
Identity = 128/254 (50.39%), Postives = 165/254 (64.96%), Query Frame = 0


Query: 42  SVLQSSSFQHWFKNWQELRKHKLTASTFAGAVGFWPRRRAQLWLEKLGAIDQFCGNLATC 101
           +V+ +    HW KNW++LRK++LTAS FA A+GF P  R  LWLEK+GA   F GN AT 
Sbjct: 48  AVVVTEPTHHWRKNWEDLRKNRLTASNFARAIGFSPDGRRNLWLEKIGAAKPFAGNRATF 107

Query: 102 WSNMKEEEALERYKLITGNSVLFPEFQVYGKANS-EDDWLAASPDGAIDKMFYGLPSRGV 161
           W    E EALERY  +TGN +L PEF VY    S E++WL ASPDG I+ +  G+ S GV
Sbjct: 108 WDIENEVEALERYNELTGNEILIPEFVVYKNGESPEENWLGASPDGVINVVKDGVTSCGV 167

Query: 162 LEIKCPFFNGDMRNASPWSRVPLYCIPQAQGLMEIMDRDWMDFYVWTPNGSSLFRLYRDV 221
           LE+KCPF N D     PW +VP  C+PQ QGLMEI+D DW+D Y WT NGSSLFR++RD 
Sbjct: 168 LEVKCPFDNRDNSKVYPWKKVPYNCVPQLQGLMEIVDTDWLDLYCWTRNGSSLFRVWRDT 227

Query: 222 EYWDVLKIALSDFWWKHVQPAREICSKSVVTNPLIELKSLRPSPRHELCSYIVCESRRVV 281
            +W+ +K AL DFW  HV PAREI +   + +P ++L+  +P   HE C  I+  + R+ 
Sbjct: 228 AFWEDMKPALFDFWQNHVLPAREIYNNFDIKDPQVKLREFKPKHWHEDCKKIMRGAERIS 287

Query: 282 NNSKLLLREFDGRL 295
            N+  L  E DG L
Sbjct: 288 ANANRLFYEIDGNL 301

[Close]

BLAST of PI0013886.1 vs. TAIR 10
Match: AT1G67660.1 (Restriction endonuclease, type II-like superfamily protein )

HSP 1 Score: 190.3 bits (482), Expect = 2.3e-48
Identity = 100/253 (39.53%), Postives = 137/253 (54.15%), Query Frame = 0


Query: 42  SVLQSSSFQHWFKNWQELRKHKLTASTFAGAVGFWP-RRRAQLWLEKL----GAIDQFCG 101
           S+L  S      + W  LRK KLT STF+ A+GFW   RRA+LW EK+      + +   
Sbjct: 107 SLLSPSDIPQKSEEWFALRKDKLTTSTFSTALGFWKGNRRAELWHEKVYDSDARVVEESA 166

Query: 102 NLATCWSNMKEEEALERYKLITGNSVLFPEFQVYGKANSEDDWLAASPDGAIDKMFYGLP 161
             A  W    E  A+ERYK I G  V    F ++  +N E  WL ASPDG +D       
Sbjct: 167 RFAMNWGVQMESSAIERYKRIMGCEVGTMGFAIH--SNEEFHWLGASPDGILDCF----- 226

Query: 162 SRGVLEIKCPFFNGDMRNASPWSRVPLYCIPQAQGLMEIMDRDWMDFYVWTPNGSSLFRL 221
             G+LE+KCP+  G      PW +VP Y +PQ QG MEIMDR+W++ Y WT NGS++FR+
Sbjct: 227 --GILEVKCPYNKGKTETVLPWKKVPYYYMPQLQGQMEIMDREWVNLYCWTRNGSTVFRV 286

Query: 222 YRDVEYWDVLKIALSDFWWKHVQPAREICSKSVVTNPLIELKSLRPSPRHELCSYIVCES 281
            RD  YW ++   L +FWW+ V PARE     ++     E+K   P+  H+     + +S
Sbjct: 287 MRDRSYWRIIHDVLREFWWESVIPAREAL---LLGKEDEEVKKYEPTSTHKRTKLAIAKS 346

Query: 282 RRVVNNSKLLLRE 290
             +   SKL+ RE
Sbjct: 347 LNLAAESKLVCRE 347

[Close]

BLAST of PI0013886.1 vs. TAIR 10
Match: AT1G67660.2 (Restriction endonuclease, type II-like superfamily protein )

HSP 1 Score: 190.3 bits (482), Expect = 2.3e-48
Identity = 100/253 (39.53%), Postives = 137/253 (54.15%), Query Frame = 0


Query: 42  SVLQSSSFQHWFKNWQELRKHKLTASTFAGAVGFWP-RRRAQLWLEKL----GAIDQFCG 101
           S+L  S      + W  LRK KLT STF+ A+GFW   RRA+LW EK+      + +   
Sbjct: 57  SLLSPSDIPQKSEEWFALRKDKLTTSTFSTALGFWKGNRRAELWHEKVYDSDARVVEESA 116

Query: 102 NLATCWSNMKEEEALERYKLITGNSVLFPEFQVYGKANSEDDWLAASPDGAIDKMFYGLP 161
             A  W    E  A+ERYK I G  V    F ++  +N E  WL ASPDG +D       
Sbjct: 117 RFAMNWGVQMESSAIERYKRIMGCEVGTMGFAIH--SNEEFHWLGASPDGILDCF----- 176

Query: 162 SRGVLEIKCPFFNGDMRNASPWSRVPLYCIPQAQGLMEIMDRDWMDFYVWTPNGSSLFRL 221
             G+LE+KCP+  G      PW +VP Y +PQ QG MEIMDR+W++ Y WT NGS++FR+
Sbjct: 177 --GILEVKCPYNKGKTETVLPWKKVPYYYMPQLQGQMEIMDREWVNLYCWTRNGSTVFRV 236

Query: 222 YRDVEYWDVLKIALSDFWWKHVQPAREICSKSVVTNPLIELKSLRPSPRHELCSYIVCES 281
            RD  YW ++   L +FWW+ V PARE     ++     E+K   P+  H+     + +S
Sbjct: 237 MRDRSYWRIIHDVLREFWWESVIPAREAL---LLGKEDEEVKKYEPTSTHKRTKLAIAKS 296

Query: 282 RRVVNNSKLLLRE 290
             +   SKL+ RE
Sbjct: 297 LNLAAESKLVCRE 297

[Close]

BLAST of PI0013886.1 vs. TAIR 10
Match: AT1G67660.3 (Restriction endonuclease, type II-like superfamily protein )

HSP 1 Score: 190.3 bits (482), Expect = 2.3e-48
Identity = 100/253 (39.53%), Postives = 137/253 (54.15%), Query Frame = 0


Query: 42  SVLQSSSFQHWFKNWQELRKHKLTASTFAGAVGFWP-RRRAQLWLEKL----GAIDQFCG 101
           S+L  S      + W  LRK KLT STF+ A+GFW   RRA+LW EK+      + +   
Sbjct: 86  SLLSPSDIPQKSEEWFALRKDKLTTSTFSTALGFWKGNRRAELWHEKVYDSDARVVEESA 145

Query: 102 NLATCWSNMKEEEALERYKLITGNSVLFPEFQVYGKANSEDDWLAASPDGAIDKMFYGLP 161
             A  W    E  A+ERYK I G  V    F ++  +N E  WL ASPDG +D       
Sbjct: 146 RFAMNWGVQMESSAIERYKRIMGCEVGTMGFAIH--SNEEFHWLGASPDGILDCF----- 205

Query: 162 SRGVLEIKCPFFNGDMRNASPWSRVPLYCIPQAQGLMEIMDRDWMDFYVWTPNGSSLFRL 221
             G+LE+KCP+  G      PW +VP Y +PQ QG MEIMDR+W++ Y WT NGS++FR+
Sbjct: 206 --GILEVKCPYNKGKTETVLPWKKVPYYYMPQLQGQMEIMDREWVNLYCWTRNGSTVFRV 265

Query: 222 YRDVEYWDVLKIALSDFWWKHVQPAREICSKSVVTNPLIELKSLRPSPRHELCSYIVCES 281
            RD  YW ++   L +FWW+ V PARE     ++     E+K   P+  H+     + +S
Sbjct: 266 MRDRSYWRIIHDVLREFWWESVIPAREAL---LLGKEDEEVKKYEPTSTHKRTKLAIAKS 325

Query: 282 RRVVNNSKLLLRE 290
             +   SKL+ RE
Sbjct: 326 LNLAAESKLVCRE 326

The following BLAST results are available for this feature:

BLAST of PI0013886.1 vs.


Match Name	E-value	Identity	Description

BLAST of PI0013886.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0K4T5	4.8e-163	95.10	YqaJ domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G302370 PE=4 S...	[more]
A0A1S3C4M6	2.6e-161	94.06	uncharacterized protein LOC103496427 OS=Cucumis melo OX=3656 GN=LOC103496427 PE=...	[more]
A0A5A7SZ18	2.6e-161	94.06	DNA-directed RNA polymerase subunit beta OS=Cucumis melo var. makuwa OX=1194695 ...	[more]
A0A0A0KG47	7.6e-161	93.01	YqaJ domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G405910 PE=4 S...	[more]
A0A6J1J2F9	2.5e-148	87.15	uncharacterized protein LOC111480647 OS=Cucurbita maxima OX=3661 GN=LOC111480647...	[more]

BLAST of PI0013886.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_011659114.2	9.8e-163	95.10	uncharacterized protein LOC101215512 [Cucumis sativus] >KAE8646186.1 hypothetica...	[more]
XP_008456487.1	5.4e-161	94.06	PREDICTED: uncharacterized protein LOC103496427 [Cucumis melo] >XP_016901977.1 P...	[more]
XP_031742491.1	1.6e-160	93.01	uncharacterized protein LOC101207616 [Cucumis sativus] >KGN47829.1 hypothetical ...	[more]
XP_038900094.1	1.7e-154	90.21	uncharacterized protein LOC120087241 [Benincasa hispida] >XP_038900095.1 unchara...	[more]
XP_022981568.1	5.2e-148	87.15	uncharacterized protein LOC111480647 [Cucurbita maxima]	[more]

BLAST of PI0013886.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G13810.1	5.3e-74	50.39	Restriction endonuclease, type II-like superfamily protein	[more]
AT1G67660.1	2.3e-48	39.53	Restriction endonuclease, type II-like superfamily protein	[more]
AT1G67660.2	2.3e-48	39.53	Restriction endonuclease, type II-like superfamily protein	[more]
AT1G67660.3	2.3e-48	39.53	Restriction endonuclease, type II-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR019080	YqaJ viral recombinase	PFAM	PF09588	YqaJ	coord: 56..197 e-value: 6.3E-16 score: 58.9
IPR011604	Exonuclease, phage-type/RecB, C-terminal	GENE3D	3.90.320.10		coord: 53..256 e-value: 5.5E-41 score: 142.5
None	No IPR available	PANTHER	PTHR46609	EXONUCLEASE, PHAGE-TYPE/RECB, C-TERMINAL DOMAIN-CONTAINING PROTEIN	coord: 24..295
None	No IPR available	PANTHER	PTHR46609:SF4	RESTRICTION ENDONUCLEASE, TYPE II-LIKE SUPERFAMILY PROTEIN	coord: 24..295
IPR011335	Restriction endonuclease type II-like	SUPERFAMILY	52980	Restriction endonuclease-like	coord: 40..244

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
PI0013886	PI0013886	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
PI0013886.1-exon	PI0013886.1-exon-chr01:16522431..16522476	exon
PI0013886.1-exon	PI0013886.1-exon-chr01:16523083..16523927	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
PI0013886.1-cds	PI0013886.1-cds-chr01:16522431..16522476	CDS
PI0013886.1-cds	PI0013886.1-cds-chr01:16523083..16523927	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
PI0013886.1	PI0013886.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0090305	nucleic acid phosphodiester bond hydrolysis
molecular_function	GO:0004519	endonuclease activity