PI0013249.1 (mRNA) Melon (PI 482460) v1

Overview


Name	PI0013249.1
Type	mRNA
Organism	Cucumis metuliferus (Melon (PI 482460) v1)
Description	CASP-like protein
Location	chr11: 4401752 .. 4402967 (+)
Sequence length	712
RNA-Seq Expression	PI0013249.1
Synteny	PI0013249.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CGCATCCCCTAATTTCAACACTCTCCATAAATCCTTCGTCTATCACTACGGTTTACCCTCGCATTCTCCATTTTTCAACTCCAATTTCACTGCTCTCTCTCGAAGAAAGTGTCCATGGATGGCCACAGGAAGGCCGGATTCGGTGTTCCGGATGGATCGCGATCGGAGACGACGACGACTACGACGGCTAGGTTTTGCGATCTTATTGTGAGGTTTGTAGCGATGATTCTCACTTTGGCTGCTGCTGTGGTTATTGGCGTAGATAAACAGACGAAAACGGTGCCGCTTCAACTCGTCGCCTCGTTGCCGCCGCTCCAAGTTCCGGTTACTGCACGGTGGCATTATCTATCTGCCTTGGTGTAAGTTTTATTTTTCTTGCCGATTTCTTTTAACTTATAATTTTGTGACATCTTATTATATGTAAAACCATCAATTTAAAGTAAAAATTTTACAAAAGAATATTTAGTCCATAAACTAATGATCTGTTATTTTTTGTTACGAAATTTAGAGCTAAAATAAGAATCACAAATCCCTAATCAACAATATTTTTCACAAATACTGTAGCTGATTAGCATCATTTGTCCATTACTCAACAAAAATCATCTATCATATAATTTCTCAAATCACCTATCACTGAAGAAAATGATTTTGAAAAGTCTCAAAATCACTATCAAACACCCTTTTAACTTAATTATAATAAAACCTATAGACTAAATTTTTATTTAATTTTATTTATTAAGAGATTAAATTATTACAAATTTGAAAATTTATTGAAAATTTAGAGTTAAGGACTAAATTGTTAATTTCACCTAAAACTAAAAGCATTTTTATAATTAATTTGAGTTGATTTTTGTTTGATATAGGTATTTCGTAGTGGCAAATGCAATAGCATGTTCATATGCAGCCTTCTCGCTGTTACTTACGTTATTAAACAAAGGCAAAAGCAGAGGCTTCATAAGATCGGCGATAATCGTGATGGACATTCTCACGGTGGCGCTGCTGTTTTCCGGCTTCGGAGCCGCCGCCGCTGTCGGCGCCATTGGCCGGCAAGGGAATTCACATCTTAATTGGAACAAAATTTGCAATGTATTTGGAAGATTCTGTGGGCAAGGAGCTGCTTCTCTTCTCCTGTCTTTGCTTGGAGCGACGTCGTTTCTCTCTCTTTCTCTGCTTTCTGCTTTGAGGCTTCAAAGGGGATTCAAGTGACCAAAAAGAA

mRNA sequence

CGCATCCCCTAATTTCAACACTCTCCATAAATCCTTCGTCTATCACTACGGTTTACCCTCGCATTCTCCATTTTTCAACTCCAATTTCACTGCTCTCTCTCGAAGAAAGTGTCCATGGATGGCCACAGGAAGGCCGGATTCGGTGTTCCGGATGGATCGCGATCGGAGACGACGACGACTACGACGGCTAGGTTTTGCGATCTTATTGTGAGGTTTGTAGCGATGATTCTCACTTTGGCTGCTGCTGTGGTTATTGGCGTAGATAAACAGACGAAAACGGTGCCGCTTCAACTCGTCGCCTCGTTGCCGCCGCTCCAAGTTCCGGTTACTGCACGGTGGCATTATCTATCTGCCTTGGTGTATTTCGTAGTGGCAAATGCAATAGCATGTTCATATGCAGCCTTCTCGCTGTTACTTACGTTATTAAACAAAGGCAAAAGCAGAGGCTTCATAAGATCGGCGATAATCGTGATGGACATTCTCACGGTGGCGCTGCTGTTTTCCGGCTTCGGAGCCGCCGCCGCTGTCGGCGCCATTGGCCGGCAAGGGAATTCACATCTTAATTGGAACAAAATTTGCAATGTATTTGGAAGATTCTGTGGGCAAGGAGCTGCTTCTCTTCTCCTGTCTTTGCTTGGAGCGACGTCGTTTCTCTCTCTTTCTCTGCTTTCTGCTTTGAGGCTTCAAAGGGGATTCAAGTGACCAAAAAGAA

Coding sequence (CDS)

ATGGATGGCCACAGGAAGGCCGGATTCGGTGTTCCGGATGGATCGCGATCGGAGACGACGACGACTACGACGGCTAGGTTTTGCGATCTTATTGTGAGGTTTGTAGCGATGATTCTCACTTTGGCTGCTGCTGTGGTTATTGGCGTAGATAAACAGACGAAAACGGTGCCGCTTCAACTCGTCGCCTCGTTGCCGCCGCTCCAAGTTCCGGTTACTGCACGGTGGCATTATCTATCTGCCTTGGTGTATTTCGTAGTGGCAAATGCAATAGCATGTTCATATGCAGCCTTCTCGCTGTTACTTACGTTATTAAACAAAGGCAAAAGCAGAGGCTTCATAAGATCGGCGATAATCGTGATGGACATTCTCACGGTGGCGCTGCTGTTTTCCGGCTTCGGAGCCGCCGCCGCTGTCGGCGCCATTGGCCGGCAAGGGAATTCACATCTTAATTGGAACAAAATTTGCAATGTATTTGGAAGATTCTGTGGGCAAGGAGCTGCTTCTCTTCTCCTGTCTTTGCTTGGAGCGACGTCGTTTCTCTCTCTTTCTCTGCTTTCTGCTTTGAGGCTTCAAAGGGGATTCAAGTGA

Protein sequence

MDGHRKAGFGVPDGSRSETTTTTTARFCDLIVRFVAMILTLAAAVVIGVDKQTKTVPLQLVASLPPLQVPVTARWHYLSALVYFVVANAIACSYAAFSLLLTLLNKGKSRGFIRSAIIVMDILTVALLFSGFGAAAAVGAIGRQGNSHLNWNKICNVFGRFCGQGAASLLLSLLGATSFLSLSLLSALRLQRGFK

Homology

[Close]

BLAST of PI0013249.1 vs. ExPASy Swiss-Prot
Match: C6TBD0 (CASP-like protein 1E1 OS=Glycine max OX=3847 PE=2 SV=1)

HSP 1 Score: 191.4 bits (485), Expect = 9.4e-48
Identity = 101/165 (61.21%), Postives = 131/165 (79.39%), Query Frame = 0


Query: 28  CDLIVRFVAMILTLAAAVVIGVDKQTKTVPLQLVASLPPLQVPVTARWHYLSALVYFVVA 87
           CDL++R +A  +TL AA+VI VDKQTK VP+QL  S PPL VP+TA+WH +SA VYF+V 
Sbjct: 23  CDLLLRLLAFTVTLVAAIVIAVDKQTKLVPIQLSDSFPPLNVPLTAKWHQMSAFVYFLVT 82

Query: 88  NAIACSYAAFSLLLTLLNKGKSRGFIRSAIIVMDILTVALLFSGFGAAAAVGAIGRQGNS 147
           NAIAC+YAA SLLL L+N+GKS+G + + I V+D   VALLFSG GAAAAVG +G +GNS
Sbjct: 83  NAIACTYAAMSLLLALVNRGKSKG-LWTLIAVLDTFMVALLFSGNGAAAAVGILGYKGNS 142

Query: 148 HLNWNKICNVFGRFCGQGAASLLLSLLGATSFLSLSLLSALRLQR 193
           H+NWNK+CNVFG+FC Q AAS+ +SL+G+ +FL L ++  +RL R
Sbjct: 143 HVNWNKVCNVFGKFCDQMAASIGVSLIGSLAFLLLVVIPVVRLHR 186

[Close]

BLAST of PI0013249.1 vs. ExPASy Swiss-Prot
Match: C6SZP8 (CASP-like protein 1E2 OS=Glycine max OX=3847 PE=2 SV=1)

HSP 1 Score: 190.3 bits (482), Expect = 2.1e-47
Identity = 100/164 (60.98%), Postives = 131/164 (79.88%), Query Frame = 0


Query: 29  DLIVRFVAMILTLAAAVVIGVDKQTKTVPLQLVASLPPLQVPVTARWHYLSALVYFVVAN 88
           DL++R +A  +TL AA+VI VDKQTK VP+QL  SLPPL VP+TA+WH +SA+VYF+V N
Sbjct: 23  DLLLRLLAFTVTLVAAIVIAVDKQTKVVPIQLSDSLPPLDVPLTAKWHQMSAIVYFLVTN 82

Query: 89  AIACSYAAFSLLLTLLNKGKSRGFIRSAIIVMDILTVALLFSGFGAAAAVGAIGRQGNSH 148
           AIAC+YA  SLLL L+N+GKS+G + + I V+D   VALLFSG GAAAAVG +G +GNSH
Sbjct: 83  AIACTYAVLSLLLALVNRGKSKG-LWTLIAVLDAFMVALLFSGNGAAAAVGVLGYKGNSH 142

Query: 149 LNWNKICNVFGRFCGQGAASLLLSLLGATSFLSLSLLSALRLQR 193
           +NWNK+CNVFG+FC Q AAS+ +SL+G+ +FL L ++  +RL R
Sbjct: 143 VNWNKVCNVFGKFCDQMAASIGVSLIGSLAFLLLVIIPGVRLHR 185

[Close]

BLAST of PI0013249.1 vs. ExPASy Swiss-Prot
Match: B9HMP6 (CASP-like protein 1E1 OS=Populus trichocarpa OX=3694 GN=POPTRDRAFT_820934 PE=3 SV=2)

HSP 1 Score: 179.5 bits (454), Expect = 3.7e-44
Identity = 103/197 (52.28%), Postives = 140/197 (71.07%), Query Frame = 0


Query: 1   MDGHRKAGFGVPDG--SRSETTTTTTARFCDLIVRFVAMILTLAAAVVIGVDKQTKTVPL 60
           M+   KA   V DG   R   + +  A  CDL++R +A++LTLAAA+V+GVDKQTK VP+
Sbjct: 1   MESQNKASLPVMDGLERRVVASQSEGASTCDLLLRVLALVLTLAAAIVLGVDKQTKVVPI 60

Query: 61  QLVASLPPLQVPVTARWHYLSALVYFVVANAIACSYAAFSLLLTLLNKGKSRGFIRSAII 120
           ++V +LP + +PV+A+WHYLSA  Y V +NAIACSYAA SL+L +  K   +G I S +I
Sbjct: 61  KIVDTLPAINLPVSAKWHYLSAFTYSVASNAIACSYAALSLVLAVSGK---KG-IMSIVI 120

Query: 121 VMDILTVALLFSGFGAAAAVGAIGRQGNSHLNWNKICNVFGRFCGQGAASLLLSLLGATS 180
           V+D+L VA+LFS  GAA A+G +G QGNSH+ W K+C+VFGRFC Q A S+ LSLLG+  
Sbjct: 121 VLDLLMVAMLFSSNGAALAIGLMGYQGNSHVRWTKVCHVFGRFCNQVAVSISLSLLGSIL 180

Query: 181 FLSLSLLSALRLQRGFK 196
           FL L  +++LRL +  K
Sbjct: 181 FLLLVGITSLRLHKKSK 193

[Close]

BLAST of PI0013249.1 vs. ExPASy Swiss-Prot
Match: A7NW78 (CASP-like protein 1E2 OS=Vitis vinifera OX=29760 GN=VIT_05s0020g01820 PE=2 SV=1)

HSP 1 Score: 174.5 bits (441), Expect = 1.2e-42
Identity = 100/194 (51.55%), Postives = 132/194 (68.04%), Query Frame = 0


Query: 1   MDGHRKAGFGVPDGSRSETTTTTTARF--CDLIVRFVAMILTLAAAVVIGVDKQTKTVPL 60
           M+   K  FG  +    E    T  +    DL++R VA+ LTL AAV++GVDKQTK V L
Sbjct: 1   MEVESKTSFGGMESKSKEVKVVTGGKLRPFDLVLRVVALALTLVAAVLLGVDKQTKVVSL 60

Query: 61  QLVASLPPLQVPVTARWHYLSALVYFVVANAIACSYAAFSLLLTLLNKGKSRGFIRSAII 120
           QL+ +LPP+ VPVTA+W YLSA VYFVV+NAIACSYAA SLLL++ N   ++G +  AI 
Sbjct: 61  QLLPTLPPMDVPVTAKWRYLSAFVYFVVSNAIACSYAALSLLLSVGNSKGNKG-LGLAIT 120

Query: 121 VMDILTVALLFSGFGAAAAVGAIGRQGNSHLNWNKICNVFGRFCGQGAASLLLSLLGATS 180
           VMD++ VALLFS  GAA A+G +G +GNS + W K+CNVFG+FC Q A +L LS  G  +
Sbjct: 121 VMDLVMVALLFSSNGAAGAIGLMGYEGNSRVRWGKVCNVFGKFCNQVAVALGLSFFGGLA 180

Query: 181 FLSLSLLSALRLQR 193
           F  L +++A  L +
Sbjct: 181 FFLLVVMAAFALNK 193

[Close]

BLAST of PI0013249.1 vs. ExPASy Swiss-Prot
Match: B9RT04 (CASP-like protein 1E1 OS=Ricinus communis OX=3988 GN=RCOM_0680180 PE=2 SV=1)

HSP 1 Score: 171.0 bits (432), Expect = 1.3e-41
Identity = 100/196 (51.02%), Postives = 133/196 (67.86%), Query Frame = 0


Query: 1   MDGHRKAGFGVPDGSRSETTTTTTARFCD-LIVRFVAMILTLAAAVVIGVDKQTKTVPLQ 60
           MD   K      DG  S        R    L++R +A +LT  AA+V GV+ QT+TVP+Q
Sbjct: 1   MDSQNKNSVDAMDGIESRGMKERGGRTNSFLVLRVLAFVLTSTAAIVHGVNNQTETVPIQ 60

Query: 61  LVASLPPLQVPVTARWHYLSALVYFVVANAIACSYAAFSLLLTLLNKGKSRGFIRSAIIV 120
           L +S+PPL VPV A+WHYLSA V+FVV+NAIACSYAA S++L+   K KS   +   I+ 
Sbjct: 61  LTSSMPPLYVPVVAKWHYLSAFVFFVVSNAIACSYAAISVMLSFCGK-KS---MVPIILT 120

Query: 121 MDILTVALLFSGFGAAAAVGAIGRQGNSHLNWNKICNVFGRFCGQGAASLLLSLLGATSF 180
           +D+L VALLFS  GAA A+G +G +GNSH+ WNK+CNVFG+FC Q AAS++LSL+G+  F
Sbjct: 121 LDLLMVALLFSSNGAATAIGVMGYKGNSHVKWNKVCNVFGKFCNQVAASVVLSLIGSIVF 180

Query: 181 LSLSLLSALRLQRGFK 196
           + L +L+A RL    K
Sbjct: 181 VLLVMLTAFRLHNKSK 192

[Close]

BLAST of PI0013249.1 vs. ExPASy TrEMBL
Match: A0A1S3C7G4 (CASP-like protein OS=Cucumis melo OX=3656 GN=LOC103497879 PE=3 SV=1)

HSP 1 Score: 333.2 bits (853), Expect = 7.4e-88
Identity = 180/195 (92.31%), Postives = 186/195 (95.38%), Query Frame = 0


Query: 1   MDGHRKAGFGVPDGSRSETTTTTTARFCDLIVRFVAMILTLAAAVVIGVDKQTKTVPLQL 60
           MDGHRKAGFGVPDGSRSE TTT T RFCDLIVRFVAMILTLAAAVVIGVDKQTKTVPLQL
Sbjct: 1   MDGHRKAGFGVPDGSRSE-TTTRTGRFCDLIVRFVAMILTLAAAVVIGVDKQTKTVPLQL 60

Query: 61  VASLPPLQVPVTARWHYLSALVYFVVANAIACSYAAFSLLLTLLNKGKSRGFIRSAIIVM 120
            ASLPPL VPVTARWHYLS+ VYFVVANAIACSYAAFSL+L+LLNKGKSRGFIRSAIIVM
Sbjct: 61  AASLPPLHVPVTARWHYLSSFVYFVVANAIACSYAAFSLVLSLLNKGKSRGFIRSAIIVM 120

Query: 121 DILTVALLFSGFGAAAAVGAIGRQGNSHLNWNKICNVFGRFCGQGAASLLLSLLGATSFL 180
           DILTVALLFSGFGAAAAVGAIG +GNSHLNWNK+CNVFGRFCGQGAASLLLSLLGA +FL
Sbjct: 121 DILTVALLFSGFGAAAAVGAIGWRGNSHLNWNKMCNVFGRFCGQGAASLLLSLLGAMAFL 180

Query: 181 SLSLLSALRLQRGFK 196
           SLSLLSA RLQRGFK
Sbjct: 181 SLSLLSAFRLQRGFK 194

[Close]

BLAST of PI0013249.1 vs. ExPASy TrEMBL
Match: A0A6J1L415 (CASP-like protein OS=Cucurbita maxima OX=3661 GN=LOC111498951 PE=3 SV=1)

HSP 1 Score: 290.0 bits (741), Expect = 7.2e-75
Identity = 160/194 (82.47%), Postives = 172/194 (88.66%), Query Frame = 0


Query: 1   MDGHRKAGFGVPDGSRSETTTTTTARFCDLIVRFVAMILTLAAAVVIGVDKQTKTVPLQL 60
           MDG RKAGFGV DGS     TTT ARFCDLI+RFVAMILTLAAAVVIGVDKQ KTV LQL
Sbjct: 1   MDGQRKAGFGVSDGSE----TTTMARFCDLILRFVAMILTLAAAVVIGVDKQAKTVSLQL 60

Query: 61  VASLPPLQVPVTARWHYLSALVYFVVANAIACSYAAFSLLLTLLNKGKS-RGFIRSAIIV 120
            A+LPPL++PVTARWHY SA VYFVV NAIACSYAAFSL+L+ +NKGK  R FIRSAI V
Sbjct: 61  TAALPPLRIPVTARWHYSSAFVYFVVVNAIACSYAAFSLVLSAVNKGKGRRSFIRSAITV 120

Query: 121 MDILTVALLFSGFGAAAAVGAIGRQGNSHLNWNKICNVFGRFCGQGAASLLLSLLGATSF 180
           MD+LTVALLFSGFGAAAAVG IG +GNSHLNWNKIC+VFGRFCGQGAASLLLSLLGATSF
Sbjct: 121 MDLLTVALLFSGFGAAAAVGVIGLKGNSHLNWNKICDVFGRFCGQGAASLLLSLLGATSF 180

Query: 181 LSLSLLSALRLQRG 194
           LSL++LSALRL RG
Sbjct: 181 LSLAVLSALRLPRG 190

[Close]

BLAST of PI0013249.1 vs. ExPASy TrEMBL
Match: A0A6J1H563 (CASP-like protein OS=Cucurbita moschata OX=3662 GN=LOC111460147 PE=3 SV=1)

HSP 1 Score: 287.7 bits (735), Expect = 3.6e-74
Identity = 158/194 (81.44%), Postives = 171/194 (88.14%), Query Frame = 0


Query: 1   MDGHRKAGFGVPDGSRSETTTTTTARFCDLIVRFVAMILTLAAAVVIGVDKQTKTVPLQL 60
           MDG RKAGFGV DGS      TTTARFCDLI+RFVAMILTLAAA+VIGVDKQ KTV LQL
Sbjct: 1   MDGQRKAGFGVSDGSE-----TTTARFCDLILRFVAMILTLAAAIVIGVDKQAKTVSLQL 60

Query: 61  VASLPPLQVPVTARWHYLSALVYFVVANAIACSYAAFSLLLTLLNKGKS-RGFIRSAIIV 120
            A+LPPL++PVTARWHY SA VYFVV NAIACSYAAFSL+L+ +NKGK  R FIRSAI V
Sbjct: 61  TAALPPLRIPVTARWHYSSAFVYFVVVNAIACSYAAFSLVLSAVNKGKGRRSFIRSAITV 120

Query: 121 MDILTVALLFSGFGAAAAVGAIGRQGNSHLNWNKICNVFGRFCGQGAASLLLSLLGATSF 180
           MD+LTVALLFSGFGAA AVG IG +GNSHLNWNKIC+VFGRFCGQGAASLLLSLLGATSF
Sbjct: 121 MDLLTVALLFSGFGAAXAVGVIGLKGNSHLNWNKICDVFGRFCGQGAASLLLSLLGATSF 180

Query: 181 LSLSLLSALRLQRG 194
           LSL++LSALRL RG
Sbjct: 181 LSLAVLSALRLPRG 189

[Close]

BLAST of PI0013249.1 vs. ExPASy TrEMBL
Match: A0A6J1CAL5 (CASP-like protein OS=Momordica charantia OX=3673 GN=LOC111009734 PE=3 SV=1)

HSP 1 Score: 259.6 bits (662), Expect = 1.0e-65
Identity = 151/196 (77.04%), Postives = 162/196 (82.65%), Query Frame = 0


Query: 1   MDGHRK-AGFGVPDGSRSETTTTTTARFCDLIVRFVAMILTLAAAVVIGVDKQTKTVPLQ 60
           MDG  K  GF   +  R  T     ARF DLI+R VA++LTLAAAVVIG DKQTKTVPLQ
Sbjct: 1   MDGQMKPPGFHGAESRR--TMAPAPARFYDLILRLVALLLTLAAAVVIGADKQTKTVPLQ 60

Query: 61  LVASLPPLQVPVTARWHYLSALVYFVVANAIACSYAAFSLLLTLLNKGKSRGFIRSAIIV 120
           L A+LPPL VPVTARWHYLSALVYFVVANAI CSYAA SLLL+ +NKG+SR  +RSAIIV
Sbjct: 61  LAAALPPLYVPVTARWHYLSALVYFVVANAIGCSYAALSLLLSAVNKGRSRS-LRSAIIV 120

Query: 121 MDILTVALLFSGFGAAAAVGAIGRQGNSHLNWNKICNVFGRFCGQGAASLLLSLLGATSF 180
           MDILTVALLFSG GAAAAVG IGR GNSHL WNKICNVFGRFCGQGAASLLLSLLGATSF
Sbjct: 121 MDILTVALLFSGVGAAAAVGVIGRNGNSHLKWNKICNVFGRFCGQGAASLLLSLLGATSF 180

Query: 181 LSLSLLSALRLQRGFK 196
           LSL +L+ALRL   FK
Sbjct: 181 LSLVVLAALRLLIEFK 193

[Close]

BLAST of PI0013249.1 vs. ExPASy TrEMBL
Match: A0A1S4E1Z7 (CASP-like protein OS=Cucumis melo OX=3656 GN=LOC103497879 PE=3 SV=1)

HSP 1 Score: 246.9 bits (629), Expect = 7.0e-62
Identity = 131/144 (90.97%), Postives = 138/144 (95.83%), Query Frame = 0


Query: 52  QTKTVPLQLVASLPPLQVPVTARWHYLSALVYFVVANAIACSYAAFSLLLTLLNKGKSRG 111
           +TKTVPLQL ASLPPL VPVTARWHYLS+ VYFVVANAIACSYAAFSL+L+LLNKGKSRG
Sbjct: 105 RTKTVPLQLAASLPPLHVPVTARWHYLSSFVYFVVANAIACSYAAFSLVLSLLNKGKSRG 164

Query: 112 FIRSAIIVMDILTVALLFSGFGAAAAVGAIGRQGNSHLNWNKICNVFGRFCGQGAASLLL 171
           FIRSAIIVMDILTVALLFSGFGAAAAVGAIG +GNSHLNWNK+CNVFGRFCGQGAASLLL
Sbjct: 165 FIRSAIIVMDILTVALLFSGFGAAAAVGAIGWRGNSHLNWNKMCNVFGRFCGQGAASLLL 224

Query: 172 SLLGATSFLSLSLLSALRLQRGFK 196
           SLLGA +FLSLSLLSA RLQRGFK
Sbjct: 225 SLLGAMAFLSLSLLSAFRLQRGFK 248

[Close]

BLAST of PI0013249.1 vs. NCBI nr
Match: XP_004150813.1 (CASP-like protein 1E1 [Cucumis sativus])

HSP 1 Score: 341.7 bits (875), Expect = 4.3e-90
Identity = 183/195 (93.85%), Postives = 187/195 (95.90%), Query Frame = 0


Query: 1   MDGHRKAGFGVPDGSRSETTTTTTARFCDLIVRFVAMILTLAAAVVIGVDKQTKTVPLQL 60
           MDGHRKAGFGVPDGSRSETTT TT RFCDLIVRFVAMILTLAAAVVIGVDKQTK VPLQL
Sbjct: 1   MDGHRKAGFGVPDGSRSETTTKTTGRFCDLIVRFVAMILTLAAAVVIGVDKQTKMVPLQL 60

Query: 61  VASLPPLQVPVTARWHYLSALVYFVVANAIACSYAAFSLLLTLLNKGKSRGFIRSAIIVM 120
             SLPP+ VPVTARWHYLSALVYFVVANAIACSYAAFSL+L+LLNK KSRGF+RSAIIVM
Sbjct: 61  ATSLPPVHVPVTARWHYLSALVYFVVANAIACSYAAFSLVLSLLNKDKSRGFMRSAIIVM 120

Query: 121 DILTVALLFSGFGAAAAVGAIGRQGNSHLNWNKICNVFGRFCGQGAASLLLSLLGATSFL 180
           DILTVALLFSGFGAAAAVGAIGRQGNSHLNWNKICNVFGRFCGQGAASLLLSLLGA SFL
Sbjct: 121 DILTVALLFSGFGAAAAVGAIGRQGNSHLNWNKICNVFGRFCGQGAASLLLSLLGAISFL 180

Query: 181 SLSLLSALRLQRGFK 196
           SLSLLSALRLQRGFK
Sbjct: 181 SLSLLSALRLQRGFK 195

[Close]

BLAST of PI0013249.1 vs. NCBI nr
Match: XP_008458485.1 (PREDICTED: CASP-like protein 1E1 isoform X4 [Cucumis melo])

HSP 1 Score: 333.2 bits (853), Expect = 1.5e-87
Identity = 180/195 (92.31%), Postives = 186/195 (95.38%), Query Frame = 0


Query: 1   MDGHRKAGFGVPDGSRSETTTTTTARFCDLIVRFVAMILTLAAAVVIGVDKQTKTVPLQL 60
           MDGHRKAGFGVPDGSRSE TTT T RFCDLIVRFVAMILTLAAAVVIGVDKQTKTVPLQL
Sbjct: 1   MDGHRKAGFGVPDGSRSE-TTTRTGRFCDLIVRFVAMILTLAAAVVIGVDKQTKTVPLQL 60

Query: 61  VASLPPLQVPVTARWHYLSALVYFVVANAIACSYAAFSLLLTLLNKGKSRGFIRSAIIVM 120
            ASLPPL VPVTARWHYLS+ VYFVVANAIACSYAAFSL+L+LLNKGKSRGFIRSAIIVM
Sbjct: 61  AASLPPLHVPVTARWHYLSSFVYFVVANAIACSYAAFSLVLSLLNKGKSRGFIRSAIIVM 120

Query: 121 DILTVALLFSGFGAAAAVGAIGRQGNSHLNWNKICNVFGRFCGQGAASLLLSLLGATSFL 180
           DILTVALLFSGFGAAAAVGAIG +GNSHLNWNK+CNVFGRFCGQGAASLLLSLLGA +FL
Sbjct: 121 DILTVALLFSGFGAAAAVGAIGWRGNSHLNWNKMCNVFGRFCGQGAASLLLSLLGAMAFL 180

Query: 181 SLSLLSALRLQRGFK 196
           SLSLLSA RLQRGFK
Sbjct: 181 SLSLLSAFRLQRGFK 194

[Close]

BLAST of PI0013249.1 vs. NCBI nr
Match: XP_038875885.1 (CASP-like protein 1E1 [Benincasa hispida])

HSP 1 Score: 331.6 bits (849), Expect = 4.4e-87
Identity = 180/195 (92.31%), Postives = 185/195 (94.87%), Query Frame = 0


Query: 1   MDGHRKAGFGVPDGSRSETTTTTTARFCDLIVRFVAMILTLAAAVVIGVDKQTKTVPLQL 60
           MDG RKAGFGVPDGSRSE   TTTARFCDLIVRFVAMILTLAAAVVIGVDKQTKTVPLQL
Sbjct: 1   MDGPRKAGFGVPDGSRSE---TTTARFCDLIVRFVAMILTLAAAVVIGVDKQTKTVPLQL 60

Query: 61  VASLPPLQVPVTARWHYLSALVYFVVANAIACSYAAFSLLLTLLNKGKSRGFIRSAIIVM 120
             +LPPL VPVTARWHYLSA VYFVVAN IACSYAAFSL+L+ LNKGKSRGFIRSAIIVM
Sbjct: 61  ADALPPLHVPVTARWHYLSAFVYFVVANGIACSYAAFSLVLSALNKGKSRGFIRSAIIVM 120

Query: 121 DILTVALLFSGFGAAAAVGAIGRQGNSHLNWNKICNVFGRFCGQGAASLLLSLLGATSFL 180
           DILTVALLFSGFGAAAAVGAIGRQGNSHLNWNKICNVFGRFCGQGAASLLLSLLGATSFL
Sbjct: 121 DILTVALLFSGFGAAAAVGAIGRQGNSHLNWNKICNVFGRFCGQGAASLLLSLLGATSFL 180

Query: 181 SLSLLSALRLQRGFK 196
           +LS+LSALRLQRGFK
Sbjct: 181 ALSVLSALRLQRGFK 192

[Close]

BLAST of PI0013249.1 vs. NCBI nr
Match: KAG6575049.1 (hypothetical protein SDJN03_25688, partial [Cucurbita argyrosperma subsp. sororia] >KAG7013625.1 hypothetical protein SDJN02_23792, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 290.4 bits (742), Expect = 1.1e-74
Identity = 159/194 (81.96%), Postives = 173/194 (89.18%), Query Frame = 0


Query: 1   MDGHRKAGFGVPDGSRSETTTTTTARFCDLIVRFVAMILTLAAAVVIGVDKQTKTVPLQL 60
           MDG RKAGFGV DGS      TTTARFCDLI+RFVAMILTLAAA+VIGVDKQ KTV LQL
Sbjct: 1   MDGQRKAGFGVSDGSE-----TTTARFCDLILRFVAMILTLAAAIVIGVDKQAKTVSLQL 60

Query: 61  VASLPPLQVPVTARWHYLSALVYFVVANAIACSYAAFSLLLTLLNKGKS-RGFIRSAIIV 120
            A+LPPL++PVTARWHY SA VYFVV NAIACSYAAFSL+L+ +NKGK  R FIRSAI V
Sbjct: 61  TAALPPLRIPVTARWHYSSAFVYFVVVNAIACSYAAFSLVLSAVNKGKGRRSFIRSAITV 120

Query: 121 MDILTVALLFSGFGAAAAVGAIGRQGNSHLNWNKICNVFGRFCGQGAASLLLSLLGATSF 180
           MD+LTVALLFSGFGAAAAVG IG +GNSHLNWNKIC+VFGRFCGQGAASLLLSLLGATSF
Sbjct: 121 MDLLTVALLFSGFGAAAAVGVIGLKGNSHLNWNKICDVFGRFCGQGAASLLLSLLGATSF 180

Query: 181 LSLSLLSALRLQRG 194
           LSL++LSALRL+RG
Sbjct: 181 LSLAVLSALRLRRG 189

[Close]

BLAST of PI0013249.1 vs. NCBI nr
Match: XP_023006113.1 (CASP-like protein 1E1 [Cucurbita maxima])

HSP 1 Score: 290.0 bits (741), Expect = 1.5e-74
Identity = 160/194 (82.47%), Postives = 172/194 (88.66%), Query Frame = 0


Query: 1   MDGHRKAGFGVPDGSRSETTTTTTARFCDLIVRFVAMILTLAAAVVIGVDKQTKTVPLQL 60
           MDG RKAGFGV DGS     TTT ARFCDLI+RFVAMILTLAAAVVIGVDKQ KTV LQL
Sbjct: 1   MDGQRKAGFGVSDGSE----TTTMARFCDLILRFVAMILTLAAAVVIGVDKQAKTVSLQL 60

Query: 61  VASLPPLQVPVTARWHYLSALVYFVVANAIACSYAAFSLLLTLLNKGKS-RGFIRSAIIV 120
            A+LPPL++PVTARWHY SA VYFVV NAIACSYAAFSL+L+ +NKGK  R FIRSAI V
Sbjct: 61  TAALPPLRIPVTARWHYSSAFVYFVVVNAIACSYAAFSLVLSAVNKGKGRRSFIRSAITV 120

Query: 121 MDILTVALLFSGFGAAAAVGAIGRQGNSHLNWNKICNVFGRFCGQGAASLLLSLLGATSF 180
           MD+LTVALLFSGFGAAAAVG IG +GNSHLNWNKIC+VFGRFCGQGAASLLLSLLGATSF
Sbjct: 121 MDLLTVALLFSGFGAAAAVGVIGLKGNSHLNWNKICDVFGRFCGQGAASLLLSLLGATSF 180

Query: 181 LSLSLLSALRLQRG 194
           LSL++LSALRL RG
Sbjct: 181 LSLAVLSALRLPRG 190

[Close]

BLAST of PI0013249.1 vs. TAIR 10
Match: AT4G15630.1 (Uncharacterised protein family (UPF0497) )

HSP 1 Score: 153.7 bits (387), Expect = 1.5e-37
Identity = 78/162 (48.15%), Postives = 116/162 (71.60%), Query Frame = 0


Query: 29  DLIVRFVAMILTLAAAVVIGVDKQTKTVPLQLVASLPPLQVPVTARWHYLSALVYFVVAN 88
           +L +R +A++LT+ AA V+GV KQTK VP++L+ +LPPL V  TA+  YLSA VY + AN
Sbjct: 28  ELTMRVLALVLTMVAATVLGVAKQTKVVPIKLIPTLPPLNVSTTAKASYLSAFVYNISAN 87

Query: 89  AIACSYAAFSLLLTLLNKGKSRGFIRSAIIVMDILTVALLFSGFGAAAAVGAIGRQGNSH 148
           AIAC Y A S+++ +++KGK    +  A+++ D++ VALLFS  GAA A+G +GR GN H
Sbjct: 88  AIACGYTAISIVIVMISKGKRSKSLLMAVLIGDLMMVALLFSSTGAAGAIGLMGRHGNKH 147

Query: 149 LNWNKICNVFGRFCGQGAASLLLSLLGATSFLSLSLLSALRL 191
           + W K+C VFG+FC Q A S+ ++L+ +  F+ L +L AL+L
Sbjct: 148 VMWKKVCGVFGKFCNQAAVSVAITLIASVVFMLLVVLDALKL 189

[Close]

BLAST of PI0013249.1 vs. TAIR 10
Match: AT4G15620.1 (Uncharacterised protein family (UPF0497) )

HSP 1 Score: 143.7 bits (361), Expect = 1.6e-34
Identity = 76/162 (46.91%), Postives = 114/162 (70.37%), Query Frame = 0


Query: 29  DLIVRFVAMILTLAAAVVIGVDKQTKTVPLQLVASLPPLQVPVTARWHYLSALVYFVVAN 88
           +L +R +A+ILT+AAA V+GV KQTK V ++L+ +LPPL +  TA+  YLSA VY +  N
Sbjct: 28  ELTMRVLALILTMAAATVLGVAKQTKVVSIKLIPTLPPLDITTTAKASYLSAFVYNISVN 87

Query: 89  AIACSYAAFSLLLTLLNKGKSRGFIRSAIIVMDILTVALLFSGFGAAAAVGAIGRQGNSH 148
           AIAC Y A S+ + ++++G+    +   +++ D++ VALLFSG GAA+A+G +G  GN H
Sbjct: 88  AIACGYTAISIAILMISRGRRSKKLLMVVLLGDLVMVALLFSGTGAASAIGLMGLHGNKH 147

Query: 149 LNWNKICNVFGRFCGQGAASLLLSLLGATSFLSLSLLSALRL 191
           + W K+C VFG+FC + A SL L+LL A  F+ L +L A++L
Sbjct: 148 VMWKKVCGVFGKFCHRAAPSLPLTLLAAVVFMFLVVLDAIKL 189

[Close]

BLAST of PI0013249.1 vs. TAIR 10
Match: AT5G44550.1 (Uncharacterised protein family (UPF0497) )

HSP 1 Score: 88.6 bits (218), Expect = 6.1e-18
Identity = 58/175 (33.14%), Postives = 99/175 (56.57%), Query Frame = 0


Query: 19  TTTTTTARFCDLI--VRFVAMILTLAAAVVIGVDKQTKTVPLQLVASLPPLQVPVTARWH 78
           T   T+ + C ++  +R +A   TL+AA+V+G++K+TKT  +  V +  P+Q   TA++ 
Sbjct: 7   TLAATSGKSCKILLGLRLLAFSATLSAAIVMGLNKETKTFIVGKVGN-TPIQATFTAKFD 66

Query: 79  YLSALVYFVVANAIACSYAAFSLLLTLL-NKGKSRGFIRSAIIVMDILTVALLFSGFGAA 138
           +  A V+FVVANA+   +    + L +   K +  GF   ++ ++D+L V L+ +   AA
Sbjct: 67  HTPAFVFFVVANAMVSFHNLLMIALQIFGGKMEFTGFRLLSVAILDMLNVTLISAAANAA 126

Query: 139 AAVGAIGRQGNSHLNWNKICNVFGRFCGQGAASLLLSLLGATSFLSLSLLSALRL 191
           A +  +G+ GN H  W+KIC+ F  +C  GA +L+ +  G    L +S  S  RL
Sbjct: 127 AFMAEVGKNGNKHARWDKICDRFATYCDHGAGALIAAFAGVILMLIISAASISRL 180

[Close]

BLAST of PI0013249.1 vs. TAIR 10
Match: AT4G20390.1 (Uncharacterised protein family (UPF0497) )

HSP 1 Score: 82.0 bits (201), Expect = 5.7e-16
Identity = 48/160 (30.00%), Postives = 94/160 (58.75%), Query Frame = 0


Query: 32  VRFVAMILTLAAAVVIGVDKQTKTVPLQLVASLPPLQVPVTARWHYLSALVYFVVANAIA 91
           +R  A + TLAAA+V+ ++K+TKT+ +  + ++ P++  +TA++ +  A V+FV+AN + 
Sbjct: 22  LRIFAFMATLAAAIVMSLNKETKTLVVATIGTV-PIKATLTAKFQHTPAFVFFVIANVMV 81

Query: 92  CSYAAFSLLLTLLN-KGKSRGFIRSAIIVMDILTVALLFSGFGAAAAVGAIGRQGNSHLN 151
             +    +++ + + K + +G    +I ++D+L   L+ +   AA  V  +G+ GN H  
Sbjct: 82  SFHNLLMIVVQIFSRKLEYKGLRLLSIAILDMLNATLVSAAANAAVFVAELGKNGNKHAK 141

Query: 152 WNKICNVFGRFCGQGAASLLLSLLGATSFLSLSLLSALRL 191
           WNK+C+ F  +C  GA +++ +  G    L +S +S  RL
Sbjct: 142 WNKVCDRFTTYCDHGAGAIIAAFAGVILMLLVSAVSISRL 180

[Close]

BLAST of PI0013249.1 vs. TAIR 10
Match: AT4G15610.1 (Uncharacterised protein family (UPF0497) )

HSP 1 Score: 80.5 bits (197), Expect = 1.7e-15
Identity = 55/175 (31.43%), Postives = 92/175 (52.57%), Query Frame = 0


Query: 20  TTTTTARFCDLIVRFVAMILTLAAAVVIGVDKQTKTVPLQLVASLPPLQVPVTARWHYLS 79
           TTT +     +++RFV    TL + VV+   KQTK + L       P+++P  A +    
Sbjct: 21  TTTKSCSMTQVVLRFVLFAATLTSIVVMVTSKQTKNIFLPGT----PIRIP-AAEFTNSP 80

Query: 80  ALVYFVVANAIACSYAAFSLLLTL--LNKGKSRGFIRSAIIVMDILTVALLFSGFGAAAA 139
           AL+YFVVA ++AC Y+  S  +T+    K      +   + +MD + V ++ S  GA   
Sbjct: 81  ALIYFVVALSVACFYSIVSTFVTVSAFKKHSCSAVLLLNLAIMDAVMVGIVASATGAGGG 140

Query: 140 VGAIGRQGNSHLNWNKICNVFGRFCGQGAASLLLSLLGATSFLSLSLLSALRLQR 193
           V  +G +GN  + W KIC+++ +FC     ++ +SL  +   L LS++S L L +
Sbjct: 141 VAYLGLKGNKEVRWGKICHIYDKFCRHVGGAIAVSLFASVVLLLLSIISVLSLYK 190

The following BLAST results are available for this feature:

BLAST of PI0013249.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
C6TBD0	9.4e-48	61.21	CASP-like protein 1E1 OS=Glycine max OX=3847 PE=2 SV=1	[more]
C6SZP8	2.1e-47	60.98	CASP-like protein 1E2 OS=Glycine max OX=3847 PE=2 SV=1	[more]
B9HMP6	3.7e-44	52.28	CASP-like protein 1E1 OS=Populus trichocarpa OX=3694 GN=POPTRDRAFT_820934 PE=3 S...	[more]
A7NW78	1.2e-42	51.55	CASP-like protein 1E2 OS=Vitis vinifera OX=29760 GN=VIT_05s0020g01820 PE=2 SV=1	[more]
B9RT04	1.3e-41	51.02	CASP-like protein 1E1 OS=Ricinus communis OX=3988 GN=RCOM_0680180 PE=2 SV=1	[more]

BLAST of PI0013249.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3C7G4	7.4e-88	92.31	CASP-like protein OS=Cucumis melo OX=3656 GN=LOC103497879 PE=3 SV=1	[more]
A0A6J1L415	7.2e-75	82.47	CASP-like protein OS=Cucurbita maxima OX=3661 GN=LOC111498951 PE=3 SV=1	[more]
A0A6J1H563	3.6e-74	81.44	CASP-like protein OS=Cucurbita moschata OX=3662 GN=LOC111460147 PE=3 SV=1	[more]
A0A6J1CAL5	1.0e-65	77.04	CASP-like protein OS=Momordica charantia OX=3673 GN=LOC111009734 PE=3 SV=1	[more]
A0A1S4E1Z7	7.0e-62	90.97	CASP-like protein OS=Cucumis melo OX=3656 GN=LOC103497879 PE=3 SV=1	[more]

BLAST of PI0013249.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004150813.1	4.3e-90	93.85	CASP-like protein 1E1 [Cucumis sativus]	[more]
XP_008458485.1	1.5e-87	92.31	PREDICTED: CASP-like protein 1E1 isoform X4 [Cucumis melo]	[more]
XP_038875885.1	4.4e-87	92.31	CASP-like protein 1E1 [Benincasa hispida]	[more]
KAG6575049.1	1.1e-74	81.96	hypothetical protein SDJN03_25688, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_023006113.1	1.5e-74	82.47	CASP-like protein 1E1 [Cucurbita maxima]	[more]

BLAST of PI0013249.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G15630.1	1.5e-37	48.15	Uncharacterised protein family (UPF0497)	[more]
AT4G15620.1	1.6e-34	46.91	Uncharacterised protein family (UPF0497)	[more]
AT5G44550.1	6.1e-18	33.14	Uncharacterised protein family (UPF0497)	[more]
AT4G20390.1	5.7e-16	30.00	Uncharacterised protein family (UPF0497)	[more]
AT4G15610.1	1.7e-15	31.43	Uncharacterised protein family (UPF0497)	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006459	Casparian strip membrane protein	TIGRFAM	TIGR01569	TIGR01569	coord: 30..189 e-value: 3.1E-45 score: 151.7
IPR006702	Casparian strip membrane protein domain	PFAM	PF04535	DUF588	coord: 24..176 e-value: 2.1E-39 score: 134.7
None	No IPR available	PANTHER	PTHR11615:SF253	CASP-LIKE PROTEIN 1E1	coord: 18..192
None	No IPR available	PANTHER	PTHR11615	NITRATE, FORMATE, IRON DEHYDROGENASE	coord: 18..192

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
PI0013249	PI0013249	gene

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
PI0013249.1-five_prime_utr	PI0013249.1-five_prime_utr-chr11:4401752..4401865	five_prime_UTR

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
PI0013249.1-exon	PI0013249.1-exon-chr11:4401752..4402110	exon
PI0013249.1-exon	PI0013249.1-exon-chr11:4402615..4402967	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
PI0013249.1-cds	PI0013249.1-cds-chr11:4401866..4402110	CDS
PI0013249.1-cds	PI0013249.1-cds-chr11:4402615..4402957	CDS

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
PI0013249.1-three_prime_utr	PI0013249.1-three_prime_utr-chr11:4402958..4402967	three_prime_UTR

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
PI0013249.1	PI0013249.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005886	plasma membrane
molecular_function	GO:0051539	4 iron, 4 sulfur cluster binding