PI0012648.1 (mRNA) Melon (PI 482460) v1

Overview


Name	PI0012648.1
Type	mRNA
Organism	Cucumis metuliferus (Melon (PI 482460) v1)
Description	Protein MNN4-like
Location	chr02: 12737736 .. 12738637 (+)
Sequence length	789
RNA-Seq Expression	PI0012648.1
Synteny	PI0012648.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCCGCCTCTTCTGAAAAGCAAACCAACACCATCAAGAGGCATTTGACCTCGAAGCCATCCCAATCACGCGAAGAAGTTGAAGAAAAAAGAAAGGAAGTTGGGATGGCAGCACTGAAGCAACTTCAGACCCAATGCCTCTACGCAGACTTGGAGGATGAAGATGTTGCGGACATGGTGGATCTCCTGGCCGCAAAGATGGAAGCCAGAAAGGAGAAGAAGAAAGAAGAAGAAAGAAAAGCAGAAGAGGAATGTCACAAGCTACGCGATGAAGAAAATAGGCAAAGAGAAGAAAGCTCAAAGAGAAAACAAAAAGAAGCTTCTCCGCCTATTGCGAACACGGAATTTGAGAGGGTGGCGAAGAAGGCCCTCAAGAAAAGGAGAAAGTGGCTGAAGGACTAACCAAGGCCAAGAAAGCTGCACAGCGAGTTAAGGAGCTCGCAAAATCAAGGAAAGATGAAAGGTTGCGAGAGGAAGAAGAACTCCGCAACAGAGTGGAGGAAGTGTCGTCCTTGGCGGACAAAGGCAAGGCGACAAAGAGCCTCAGCGATGAGATTACTGAGGAATTTGATAAGGAATTAGAAGAAATGAGTCCTTTAGAGGACGAAGTAATCAAGCCCGCCAAGACAAGAAGATTAACAATAAAGAAAAAAGTCCTCGTGGAACAAGTGACAAAAAGAAGAGAGGAAAAAGCGAAAAAGAGTGTCCACGAGAATGAGGCGGCACAACAAGAAGAGGAGGAAGAAGTGGCTCCAGAAGGCAACGAAGAGCCCATCACCGCGAAGAACGTCTCAAAACATTTCAAGATAAAGAAGGGGCTCTATCCCACAAGAGGGTTCTACCAGTCTTTATCTTCGCACCCATTCGCGCGTTCAAGTGGCAAAAGTTCTTCGAAGGGGTGA

mRNA sequence

ATGGCCGCCTCTTCTGAAAAGCAAACCAACACCATCAAGAGGCATTTGACCTCGAAGCCATCCCAATCACGCGAAGAAGTTGAAGAAAAAAGAAAGGAAGTTGGGATGGCAGCACTGAAGCAACTTCAGACCCAATGCCTCTACGCAGACTTGGAGGATGAAGATGTTGCGGACATGGTGGATCTCCTGGCCGCAAAGATGGAAGCCAGAAAGGAGAAGAAGAAAGAAGAAGAAAGAAAAGCAGAAGAGGAATGCCCTCAAGAAAAGGAGAAAGTGGCTGAAGGACTAACCAAGGCCAAGAAAGCTGCACAGCGAGTTAAGGAGCTCGCAAAATCAAGGAAAGATGAAAGGTTGCGAGAGGAAGAAGAACTCCGCAACAGAGTGGAGGAAGTGTCGTCCTTGGCGGACAAAGGCAAGGCGACAAAGAGCCTCAGCGATGAGATTACTGAGGAATTTGATAAGGAATTAGAAGAAATGAGTCCTTTAGAGGACGAAGTAATCAAGCCCGCCAAGACAAGAAGATTAACAATAAAGAAAAAAGTCCTCGTGGAACAAGTGACAAAAAGAAGAGAGGAAAAAGCGAAAAAGAGTGTCCACGAGAATGAGGCGGCACAACAAGAAGAGGAGGAAGAAGTGGCTCCAGAAGGCAACGAAGAGCCCATCACCGCGAAGAACGTCTCAAAACATTTCAAGATAAAGAAGGGGCTCTATCCCACAAGAGGGTTCTACCAGTCTTTATCTTCGCACCCATTCGCGCGTTCAAGTGGCAAAAGTTCTTCGAAGGGGTGA

Coding sequence (CDS)

ATGGCCGCCTCTTCTGAAAAGCAAACCAACACCATCAAGAGGCATTTGACCTCGAAGCCATCCCAATCACGCGAAGAAGTTGAAGAAAAAAGAAAGGAAGTTGGGATGGCAGCACTGAAGCAACTTCAGACCCAATGCCTCTACGCAGACTTGGAGGATGAAGATGTTGCGGACATGGTGGATCTCCTGGCCGCAAAGATGGAAGCCAGAAAGGAGAAGAAGAAAGAAGAAGAAAGAAAAGCAGAAGAGGAATGCCCTCAAGAAAAGGAGAAAGTGGCTGAAGGACTAACCAAGGCCAAGAAAGCTGCACAGCGAGTTAAGGAGCTCGCAAAATCAAGGAAAGATGAAAGGTTGCGAGAGGAAGAAGAACTCCGCAACAGAGTGGAGGAAGTGTCGTCCTTGGCGGACAAAGGCAAGGCGACAAAGAGCCTCAGCGATGAGATTACTGAGGAATTTGATAAGGAATTAGAAGAAATGAGTCCTTTAGAGGACGAAGTAATCAAGCCCGCCAAGACAAGAAGATTAACAATAAAGAAAAAAGTCCTCGTGGAACAAGTGACAAAAAGAAGAGAGGAAAAAGCGAAAAAGAGTGTCCACGAGAATGAGGCGGCACAACAAGAAGAGGAGGAAGAAGTGGCTCCAGAAGGCAACGAAGAGCCCATCACCGCGAAGAACGTCTCAAAACATTTCAAGATAAAGAAGGGGCTCTATCCCACAAGAGGGTTCTACCAGTCTTTATCTTCGCACCCATTCGCGCGTTCAAGTGGCAAAAGTTCTTCGAAGGGGTGA

Protein sequence

MAASSEKQTNTIKRHLTSKPSQSREEVEEKRKEVGMAALKQLQTQCLYADLEDEDVADMVDLLAAKMEARKEKKKEEERKAEEECPQEKEKVAEGLTKAKKAAQRVKELAKSRKDERLREEEELRNRVEEVSSLADKGKATKSLSDEITEEFDKELEEMSPLEDEVIKPAKTRRLTIKKKVLVEQVTKRREEKAKKSVHENEAAQQEEEEEVAPEGNEEPITAKNVSKHFKIKKGLYPTRGFYQSLSSHPFARSSGKSSSKG

Homology

[Close]

BLAST of PI0012648.1 vs. ExPASy TrEMBL
Match: A0A5A7TGV4 (Protein MNN4-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold32G00910 PE=4 SV=1)

HSP 1 Score: 82.0 bits (201), Expect = 4.0e-12
Identity = 65/163 (39.88%), Postives = 101/163 (61.96%), Query Frame = 0


Query: 77  EERKAEEECPQEKEKVAEGLTKAKKAAQRVKELAKSRKDERLREEEELRNRVEEVSSLAD 136
           E  +   +  ++ EKV   L K K  AQR   LA+ +K+ +LR+ EEL N+V++++   +
Sbjct: 5   EFERVVNKAQEKTEKVRARLLKIKVKAQRAMALAEGKKEIKLRQPEELLNKVDKLALSVE 64

Query: 137 KGKATKSLSDEITEEFDKELEEMSPLEDEVI-KPAKTRRLTIKKKVLVEQVTKRREEKAK 196
           KGK  +   +E  +EF+KE++E SPLED V+ +PAK R +T+KKKVL +Q  KRR+EK +
Sbjct: 65  KGKEKEKTFEEFYKEFEKEIDEFSPLEDNVVERPAKKRNVTMKKKVLRDQFAKRRKEKKR 124

Query: 197 KSVHENEAAQQEEEEEVAPEGNEEPITAKNVSKHFKIKKGLYP 239
           +        Q+E E+EV     E  ++ ++VS  F  +KGLYP
Sbjct: 125 R------GPQKESEKEVERSEKEGSLSERHVSILFMREKGLYP 161

[Close]

BLAST of PI0012648.1 vs. ExPASy TrEMBL
Match: A0A5A7T4G8 (Protein MNN4-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold270G001100 PE=4 SV=1)

HSP 1 Score: 78.2 bits (191), Expect = 5.8e-11
Identity = 57/129 (44.19%), Postives = 86/129 (66.67%), Query Frame = 0


Query: 111 KSRKDERLREEEELRNRVEEVSSLADKGKATKSLSDEITEEFDKELEEMSPLEDEVIKPA 170
           + +K+ +LRE + L N++E+V     KGKA K+ S+E+ EEF+++L+ +S LEDE++  +
Sbjct: 2   EEKKEVKLRERKGLLNKIEKVLLSLKKGKARKTPSEELVEEFERKLDNLSHLEDEMVNSS 61

Query: 171 -KTRRLTIKKKVLVEQVTKRREEKAKKSVHENEAAQQEEEEEVAPEGNEEPITAKNVSKH 230
            K +++TIKK VL EQ  KRREEK KK    +E    EEEE++  E N EP     +SK+
Sbjct: 62  KKKKKVTIKKSVLKEQFVKRREEKEKKKGPLSEVT-LEEEEDLKGEKN-EPFCGNTISKY 121

Query: 231 FKIKKGLYP 239
           FKI+  L+P
Sbjct: 122 FKIENELFP 128

[Close]

BLAST of PI0012648.1 vs. ExPASy TrEMBL
Match: A0A5A7V2S6 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold313G002250 PE=4 SV=1)

HSP 1 Score: 77.0 bits (188), Expect = 1.3e-10
Identity = 58/127 (45.67%), Postives = 81/127 (63.78%), Query Frame = 0


Query: 139 KATKSLSDEITEEF-DKELEEMSPLEDEVIKPAKTRRL-TIKKKVLVEQVTKRREEKAKK 198
           K + S+    +EEF +K+LE +S  EDEV+KP K +++  +KK +L EQ++KRREEK KK
Sbjct: 3   KVSLSMEKTPSEEFTEKKLENLSHFEDEVVKPLKKKKIKNMKKSMLKEQLSKRREEKEKK 62

Query: 199 SVHENEAAQQEEEEEVAPEGNE-EPITAKNVSKHFKIKKGLYPTRGFYQSLSSHPFARSS 258
              +        E+E   +GNE EP + + VSKHF I+ GL+P +G  Q     PFARSS
Sbjct: 63  K--KGPRTDTTLEDEDLEQGNENEPFSVEYVSKHFTIENGLFPFKGSCQQFWGPPFARSS 122

Query: 259 GKSSSKG 263
           GKSS +G
Sbjct: 123 GKSSLRG 127

[Close]

BLAST of PI0012648.1 vs. ExPASy TrEMBL
Match: A0A0A0K7W9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G290550 PE=4 SV=1)

HSP 1 Score: 76.6 bits (187), Expect = 1.7e-10
Identity = 47/93 (50.54%), Postives = 69/93 (74.19%), Query Frame = 0


Query: 104 QRVKELAKSRKDERLREEEELRNRVEEVSSLADKGKATKSLSDEITEEFDKELEEMSPLE 163
           QR K L + +K  +LRE++EL N++++      KGK  K+ S+EI EEF+++LE++SPLE
Sbjct: 3   QRFKALMQDKKKVKLREQKELLNKIDQAPISTKKGKVRKTPSEEICEEFERKLEDLSPLE 62

Query: 164 DEVIKPAKTRRLTIKKKVLVEQVTKRREEKAKK 197
           DEV+KP K +++T+KK VL +Q  KRREEK KK
Sbjct: 63  DEVVKPLK-KKVTVKKSVLKKQFDKRREEKEKK 94

[Close]

BLAST of PI0012648.1 vs. ExPASy TrEMBL
Match: A0A5D3BSJ3 (Protein MNN4-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold16540G00050 PE=4 SV=1)

HSP 1 Score: 72.4 bits (176), Expect = 3.2e-09
Identity = 49/96 (51.04%), Postives = 69/96 (71.88%), Query Frame = 0


Query: 83  EECPQEKEKVAEGLTKAKKAAQRVKELAKSRKDERLREEEELRNRVEEVSSLADKGKATK 142
           EE P+E+ K A G  K K  A  +K L + +K+ RL+E+EEL N+V++V+   DKGK  +
Sbjct: 50  EEGPREEGK-ASGFLKLKVTAHDIKALVQEKKETRLKEQEELLNKVDKVTLSVDKGKPKR 109

Query: 143 SLSDEITEEFDKELEEMSPLEDEVIKPAKTRRLTIK 179
           + S+EI EEF KELEE+SPLEDEV+KP+K +R  +K
Sbjct: 110 TQSEEICEEF-KELEELSPLEDEVVKPSKKKRNDLK 143

[Close]

BLAST of PI0012648.1 vs. NCBI nr
Match: KAA0041276.1 (protein MNN4-like [Cucumis melo var. makuwa] >TYK16072.1 protein MNN4-like [Cucumis melo var. makuwa])

HSP 1 Score: 82.0 bits (201), Expect = 8.2e-12
Identity = 65/163 (39.88%), Postives = 101/163 (61.96%), Query Frame = 0


Query: 77  EERKAEEECPQEKEKVAEGLTKAKKAAQRVKELAKSRKDERLREEEELRNRVEEVSSLAD 136
           E  +   +  ++ EKV   L K K  AQR   LA+ +K+ +LR+ EEL N+V++++   +
Sbjct: 5   EFERVVNKAQEKTEKVRARLLKIKVKAQRAMALAEGKKEIKLRQPEELLNKVDKLALSVE 64

Query: 137 KGKATKSLSDEITEEFDKELEEMSPLEDEVI-KPAKTRRLTIKKKVLVEQVTKRREEKAK 196
           KGK  +   +E  +EF+KE++E SPLED V+ +PAK R +T+KKKVL +Q  KRR+EK +
Sbjct: 65  KGKEKEKTFEEFYKEFEKEIDEFSPLEDNVVERPAKKRNVTMKKKVLRDQFAKRRKEKKR 124

Query: 197 KSVHENEAAQQEEEEEVAPEGNEEPITAKNVSKHFKIKKGLYP 239
           +        Q+E E+EV     E  ++ ++VS  F  +KGLYP
Sbjct: 125 R------GPQKESEKEVERSEKEGSLSERHVSILFMREKGLYP 161

[Close]

BLAST of PI0012648.1 vs. NCBI nr
Match: KAA0038260.1 (protein MNN4-like [Cucumis melo var. makuwa])

HSP 1 Score: 78.2 bits (191), Expect = 1.2e-10
Identity = 57/129 (44.19%), Postives = 86/129 (66.67%), Query Frame = 0


Query: 111 KSRKDERLREEEELRNRVEEVSSLADKGKATKSLSDEITEEFDKELEEMSPLEDEVIKPA 170
           + +K+ +LRE + L N++E+V     KGKA K+ S+E+ EEF+++L+ +S LEDE++  +
Sbjct: 2   EEKKEVKLRERKGLLNKIEKVLLSLKKGKARKTPSEELVEEFERKLDNLSHLEDEMVNSS 61

Query: 171 -KTRRLTIKKKVLVEQVTKRREEKAKKSVHENEAAQQEEEEEVAPEGNEEPITAKNVSKH 230
            K +++TIKK VL EQ  KRREEK KK    +E    EEEE++  E N EP     +SK+
Sbjct: 62  KKKKKVTIKKSVLKEQFVKRREEKEKKKGPLSEVT-LEEEEDLKGEKN-EPFCGNTISKY 121

Query: 231 FKIKKGLYP 239
           FKI+  L+P
Sbjct: 122 FKIENELFP 128

[Close]

BLAST of PI0012648.1 vs. NCBI nr
Match: TYK25886.1 (protein MNN4-like [Cucumis melo var. makuwa])

HSP 1 Score: 77.4 bits (189), Expect = 2.0e-10
Identity = 58/137 (42.34%), Postives = 87/137 (63.50%), Query Frame = 0


Query: 123 ELRNRVEEVSSLADKGKATKSLSDEITEEFDKELEEMSPLED-EVIKPAKTRRLTIKKKV 182
           EL N+ E+++    K KA K+ S+   +E +KELE++SP ED EV+KP+K R++T+K KV
Sbjct: 34  ELLNKAEKITLSVKKDKAKKT-SEAYCDELEKELEDLSPSEDEEVVKPSKKRKVTMKMKV 93

Query: 183 LVEQVTKRREEKAKKSVHENEAAQQEEEEEVAPEGNEEPITAKNVSKHFKIKKGLYPTRG 242
           L +Q   R+EEK KK  H  +  ++EE++E      E+P++A  VSK F I+K LYP +G
Sbjct: 94  LSKQFADRQEEKEKKGPHIEDIKEEEEDQE---SEMEKPLSANEVSKQFMIEKRLYPFKG 153

Query: 243 FYQSLSSHPF-ARSSGK 258
              +  + P  A S GK
Sbjct: 154 IMLAFLASPIRAFSQGK 166

[Close]

BLAST of PI0012648.1 vs. NCBI nr
Match: KAA0062383.1 (hypothetical protein E6C27_scaffold154G001590 [Cucumis melo var. makuwa] >TYK26595.1 hypothetical protein E5676_scaffold313G002250 [Cucumis melo var. makuwa])

HSP 1 Score: 77.0 bits (188), Expect = 2.6e-10
Identity = 58/127 (45.67%), Postives = 81/127 (63.78%), Query Frame = 0


Query: 139 KATKSLSDEITEEF-DKELEEMSPLEDEVIKPAKTRRL-TIKKKVLVEQVTKRREEKAKK 198
           K + S+    +EEF +K+LE +S  EDEV+KP K +++  +KK +L EQ++KRREEK KK
Sbjct: 3   KVSLSMEKTPSEEFTEKKLENLSHFEDEVVKPLKKKKIKNMKKSMLKEQLSKRREEKEKK 62

Query: 199 SVHENEAAQQEEEEEVAPEGNE-EPITAKNVSKHFKIKKGLYPTRGFYQSLSSHPFARSS 258
              +        E+E   +GNE EP + + VSKHF I+ GL+P +G  Q     PFARSS
Sbjct: 63  K--KGPRTDTTLEDEDLEQGNENEPFSVEYVSKHFTIENGLFPFKGSCQQFWGPPFARSS 122

Query: 259 GKSSSKG 263
           GKSS +G
Sbjct: 123 GKSSLRG 127

[Close]

BLAST of PI0012648.1 vs. NCBI nr
Match: KGN44432.1 (hypothetical protein Csa_016511 [Cucumis sativus])

HSP 1 Score: 76.6 bits (187), Expect = 3.5e-10
Identity = 47/93 (50.54%), Postives = 69/93 (74.19%), Query Frame = 0


Query: 104 QRVKELAKSRKDERLREEEELRNRVEEVSSLADKGKATKSLSDEITEEFDKELEEMSPLE 163
           QR K L + +K  +LRE++EL N++++      KGK  K+ S+EI EEF+++LE++SPLE
Sbjct: 3   QRFKALMQDKKKVKLREQKELLNKIDQAPISTKKGKVRKTPSEEICEEFERKLEDLSPLE 62

Query: 164 DEVIKPAKTRRLTIKKKVLVEQVTKRREEKAKK 197
           DEV+KP K +++T+KK VL +Q  KRREEK KK
Sbjct: 63  DEVVKPLK-KKVTVKKSVLKKQFDKRREEKEKK 94

The following BLAST results are available for this feature:

BLAST of PI0012648.1 vs.


Match Name	E-value	Identity	Description

BLAST of PI0012648.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7TGV4	4.0e-12	39.88	Protein MNN4-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold32G009...	[more]
A0A5A7T4G8	5.8e-11	44.19	Protein MNN4-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold270G00...	[more]
A0A5A7V2S6	1.3e-10	45.67	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A0A0K7W9	1.7e-10	50.54	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G290550 PE=4 SV=1	[more]
A0A5D3BSJ3	3.2e-09	51.04	Protein MNN4-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold16540G...	[more]

BLAST of PI0012648.1 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0041276.1	8.2e-12	39.88	protein MNN4-like [Cucumis melo var. makuwa] >TYK16072.1 protein MNN4-like [Cucu...	[more]
KAA0038260.1	1.2e-10	44.19	protein MNN4-like [Cucumis melo var. makuwa]	[more]
TYK25886.1	2.0e-10	42.34	protein MNN4-like [Cucumis melo var. makuwa]	[more]
KAA0062383.1	2.6e-10	45.67	hypothetical protein E6C27_scaffold154G001590 [Cucumis melo var. makuwa] >TYK265...	[more]
KGN44432.1	3.5e-10	50.54	hypothetical protein Csa_016511 [Cucumis sativus]	[more]

BLAST of PI0012648.1 vs. NCBI nr


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25

Position :

Zoom :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 189..209
None	No IPR available	COILS	Coil	Coil	coord: 59..91
None	No IPR available	COILS	Coil	Coil	coord: 107..131
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 69..146
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..17
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 151..170
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..32
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 243..262
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 18..32
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 187..203
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 187..229

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
PI0012648	PI0012648	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
PI0012648.1-exon	PI0012648.1-exon-chr02:12737736..12737988	exon
PI0012648.1-exon	PI0012648.1-exon-chr02:12738102..12738637	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
PI0012648.1-cds	PI0012648.1-cds-chr02:12737736..12737988	CDS
PI0012648.1-cds	PI0012648.1-cds-chr02:12738102..12738637	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
PI0012648.1	PI0012648.1-protein	polypeptide