PI0011993.1 (mRNA) Melon (PI 482460) v1

Overview


Name	PI0011993.1
Type	mRNA
Organism	Cucumis metuliferus (Melon (PI 482460) v1)
Description	Transcription termination factor MTERF5
Location	chr10: 17167841 .. 17169603 (+)
Sequence length	1122
RNA-Seq Expression	PI0011993.1
Synteny	PI0011993.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCCAAAATTTCCTCCACATTTCTTCTACATTTCATCCAAAAACGTTTTCTCAATACCATTTCTACTTCTACGTTGCCTTTGGCCTCTGTTTCTACCATCGAATTCCTCATTAATACATGGGGCCTTGATTCAGAATCTCCTTCTTCCACCGGTCGAAAGCTCCAAATCAATGAAAAAGACTCTCACAAGTACGAAGCTTTAATCGGTTTCTTGAAATCACATGGATTCGAGAATTCACAGATCGCCAAGTTGGTCTCGAAGCGACCTTCGATCCTTGAATCCAGAGTATCCACCAATCTGAAGCCTAAATTTGATTTCCTCCAGGAAATCGGGTTCGTTGGTCCTTCACTTCGTAAGCTACTTGTATCAAACCCTTCGATTCTTGAAAGGAGCTTAGATTCTCATTTGAAACCAACATTTTTTTTCTTAAAGGAAATTCTTGAATCGGGTGAACAAGAAACTGTTGCTATTTGTCGTTCTTCAAGGCTTCTAACTTGTGATTCTAAGGGTACTACAAAATCTAACATTGATGTTTTTGCCAGTGAAGGAGTACTTTCTAGGACTATAGCGAAATTGATTGCATTGAACCCTAGATTTCCTATGCAAAAGTTTGATAGAGTGATTCATGCAGTGAAAACGGTTAAAGAATTAGGCATTGAACCAAAGGATCGTCTGTTTGTTTATGCAGTTAGTGCAGTGGTTTCAATGCCTTATTCAACTTGGGAGAAGAAAATAAATGTTTTGAAGAGTTTTGGTTGGTCTGAGAATGAGATTTTTAAAGCATTTAAGTCAGACCCACTTATTTTAACTTGTTCAGAGGAGAAAATGAGGGATGTTGCAGATTTCTGTTTCAACACTGCAAAGTTGGATCCAGGAACCGTAATTTCTTACCCTAGGTTCTTCAAGTTGTCACTCGACAAGCGGATCCGACCGAGGTACAAAGTTCTTGAGGTTTTGAAGGTGAAAAATCTTTTTAAGAACAAAAGCGTTGCTTGGGCGCTTGTACAAACGGAGAGAAAATTGTGGAGAAATATGTTGTTAAGCATTTGGATGACATCCCAAATCTTATGGACATATACCGGGGAAATGTCACAGCCGAAACCAGTTCTGTTCAATAGGATTGGAAAGTTGTAAGTGGGAGAAGTCTAAATTTGAGCATCATGATCTTCAAATGGGGGTGCTTTTCAAGATCTCTCTCTCTTTCCAAGTGGGAGAAGTCTGTTGTTTTCCCTTCCAGTTTGAGGCTCTTACCTAAATATTTTGCTATATATTTCTTAGACCTATTAATCTTGCAATGTAAGTCCTTTTGTTTTCCCCGTCCTAATCTCTTACTCTTTCTTCAACTTTTGTAAGTTTGTAGACTAATTTTGGATCTATTGACCTGGAAATGGAGGTGGTTTTTTTCATTCATATCAGATGAGAGACATGAGAGTTCTAGATCATTTCTATGCTTAGATCATTTATACCCATTAACTTTATCTGATATCATATCAAAACCCAAATCTGCTATTCCAGGAACTCTAATTTCTTACCCTTTGTTCTTCAAGTCTGCACTCAACAAGCGGCTCCAGCCAAGGTACAAAGTTCTTGAGGTTTTGAAGGTAAAAAATCTTCTTAAGAACATAAAGATCGCTCGGGTGCTTGTACAAGGGGAGAGAGAGTTTGTGGAGAAATATGTTGTTAAGCATTTGGATGAAAACCCAAATCTTATGGACATATACCAGGGCAACGTCACAGCTGAAACCAAATCTGTTCTGTAG

mRNA sequence

ATGTCCAAAATTTCCTCCACATTTCTTCTACATTTCATCCAAAAACGTTTTCTCAATACCATTTCTACTTCTACGTTGCCTTTGGCCTCTGTTTCTACCATCGAATTCCTCATTAATACATGGGGCCTTGATTCAGAATCTCCTTCTTCCACCGGTCGAAAGCTCCAAATCAATGAAAAAGACTCTCACAAGTACGAAGCTTTAATCGGTTTCTTGAAATCACATGGATTCGAGAATTCACAGATCGCCAAGTTGGTCTCGAAGCGACCTTCGATCCTTGAATCCAGAGTATCCACCAATCTGAAGCCTAAATTTGATTTCCTCCAGGAAATCGGGTTCGTTGGTCCTTCACTTCGTAAGCTACTTGTATCAAACCCTTCGATTCTTGAAAGGAGCTTAGATTCTCATTTGAAACCAACATTTTTTTTCTTAAAGGAAATTCTTGAATCGGGTGAACAAGAAACTGTTGCTATTTGTCGTTCTTCAAGGCTTCTAACTTGTGATTCTAAGGGTACTACAAAATCTAACATTGATGTTTTTGCCAGTGAAGGAGTACTTTCTAGGACTATAGCGAAATTGATTGCATTGAACCCTAGATTTCCTATGCAAAAGTTTGATAGAGTGATTCATGCAGTGAAAACGGTTAAAGAATTAGGCATTGAACCAAAGGATCGTCTGTTTGTTTATGCAGTTAGTGCAGTGGTTTCAATGCCTTATTCAACTTGGGAGAAGAAAATAAATGTTTTGAAGAGTTTTGGTTGGTCTGAGAATGAGATTTTTAAAGCATTTAAGTCAGACCCACTTATTTTAACTTGTTCAGAGGAGAAAATGAGGGATGTTGCAGATTTCTGTTTCAACACTGCAAAGTTGGATCCAGGAACCGTAATTTCTTACCCTAGGTTCTTCAAGTTGTCACTCGACAAGCGGATCCGACCGAGGTACAAAGTTCTTGAGGTTTTGAAGGTAAAAAATCTTCTTAAGAACATAAAGATCGCTCGGGTGCTTGTACAAGGGGAGAGAGAGTTTGTGGAGAAATATGTTGTTAAGCATTTGGATGAAAACCCAAATCTTATGGACATATACCAGGGCAACGTCACAGCTGAAACCAAATCTGTTCTGTAG

Coding sequence (CDS)

ATGTCCAAAATTTCCTCCACATTTCTTCTACATTTCATCCAAAAACGTTTTCTCAATACCATTTCTACTTCTACGTTGCCTTTGGCCTCTGTTTCTACCATCGAATTCCTCATTAATACATGGGGCCTTGATTCAGAATCTCCTTCTTCCACCGGTCGAAAGCTCCAAATCAATGAAAAAGACTCTCACAAGTACGAAGCTTTAATCGGTTTCTTGAAATCACATGGATTCGAGAATTCACAGATCGCCAAGTTGGTCTCGAAGCGACCTTCGATCCTTGAATCCAGAGTATCCACCAATCTGAAGCCTAAATTTGATTTCCTCCAGGAAATCGGGTTCGTTGGTCCTTCACTTCGTAAGCTACTTGTATCAAACCCTTCGATTCTTGAAAGGAGCTTAGATTCTCATTTGAAACCAACATTTTTTTTCTTAAAGGAAATTCTTGAATCGGGTGAACAAGAAACTGTTGCTATTTGTCGTTCTTCAAGGCTTCTAACTTGTGATTCTAAGGGTACTACAAAATCTAACATTGATGTTTTTGCCAGTGAAGGAGTACTTTCTAGGACTATAGCGAAATTGATTGCATTGAACCCTAGATTTCCTATGCAAAAGTTTGATAGAGTGATTCATGCAGTGAAAACGGTTAAAGAATTAGGCATTGAACCAAAGGATCGTCTGTTTGTTTATGCAGTTAGTGCAGTGGTTTCAATGCCTTATTCAACTTGGGAGAAGAAAATAAATGTTTTGAAGAGTTTTGGTTGGTCTGAGAATGAGATTTTTAAAGCATTTAAGTCAGACCCACTTATTTTAACTTGTTCAGAGGAGAAAATGAGGGATGTTGCAGATTTCTGTTTCAACACTGCAAAGTTGGATCCAGGAACCGTAATTTCTTACCCTAGGTTCTTCAAGTTGTCACTCGACAAGCGGATCCGACCGAGGTACAAAGTTCTTGAGGTTTTGAAGGTAAAAAATCTTCTTAAGAACATAAAGATCGCTCGGGTGCTTGTACAAGGGGAGAGAGAGTTTGTGGAGAAATATGTTGTTAAGCATTTGGATGAAAACCCAAATCTTATGGACATATACCAGGGCAACGTCACAGCTGAAACCAAATCTGTTCTGTAG

Protein sequence

MSKISSTFLLHFIQKRFLNTISTSTLPLASVSTIEFLINTWGLDSESPSSTGRKLQINEKDSHKYEALIGFLKSHGFENSQIAKLVSKRPSILESRVSTNLKPKFDFLQEIGFVGPSLRKLLVSNPSILERSLDSHLKPTFFFLKEILESGEQETVAICRSSRLLTCDSKGTTKSNIDVFASEGVLSRTIAKLIALNPRFPMQKFDRVIHAVKTVKELGIEPKDRLFVYAVSAVVSMPYSTWEKKINVLKSFGWSENEIFKAFKSDPLILTCSEEKMRDVADFCFNTAKLDPGTVISYPRFFKLSLDKRIRPRYKVLEVLKVKNLLKNIKIARVLVQGEREFVEKYVVKHLDENPNLMDIYQGNVTAETKSVL

Homology

[Close]

BLAST of PI0011993.1 vs. ExPASy Swiss-Prot
Match: Q9FM80 (Transcription termination factor MTERF9, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=MTERF9 PE=2 SV=1)

HSP 1 Score: 76.3 bits (186), Expect = 8.4e-13
Identity = 74/341 (21.70%), Postives = 153/341 (44.87%), Query Frame = 0


Query: 26  LPLASVSTIEFLINTWGLDSESPSSTGRKLQ------INEKD-SHKYEALIGFLKSHGFE 85
           L ++  +T E    +W LD     S+ + ++        E D   K   L+ +L + G +
Sbjct: 138 LGISPNATSEKKKESWRLDGRGKMSSRKYVEKLYPRLAEEIDIDPKCVPLLDYLSTFGLK 197

Query: 86  NSQIAKLVSKRPSILESRVSTNLKPKFDFLQEIGFVGPSLRKLLVSNPSILERSLDSHLK 145
            S   ++  +    L+  V  + + + D+L  +G     ++++L+  P IL+ +++++LK
Sbjct: 198 ESHFVQMYERHMPSLQINV-FSAQERLDYLLSVGVKHRDIKRMLLRQPQILQYTVENNLK 257

Query: 146 PTFFFLKEILESGEQETVAICRSSRLLTCDSKGTTKSNIDVFASE-GVLSRTIAKLIALN 205
               FL  +     +    +  +  L +   + + +  I     E G+    + K++ L+
Sbjct: 258 AHISFLMGLGIPNSKIGQIVAATPSLFSYSVENSLRPTIRYLIEEVGIKETDVGKVVQLS 317

Query: 206 PRFPMQKFDRVIHA--VKTVKELGIEPKDRLFVYAVSAVVSMPYST---WEKKINVLKSF 265
           P+  +Q+ D   +   +   KELG  P+D +          + YS    +  +IN L+S 
Sbjct: 318 PQILVQRLDITWNTRYMFLSKELG-APRDSVVKMVKKHPQLLHYSIDDGFLPRINFLRSI 377

Query: 266 GWSENEIFKAFKSDPLILTCS-EEKMRDVADFCFNTAKLDPGTVISYPRFFKLSLDKRIR 325
           G   ++I K   S   +L+ S E+ ++    +  N    +   +  YP +  LSLD+RIR
Sbjct: 378 GMCNSDILKVLTSLTQVLSLSLEDNLKPKYMYLVNELNNEVHILTKYPMYLSLSLDQRIR 437

Query: 326 PRYKVLEVLKVKNLLKNIKIARVLVQGEREFVEKYVVKHLD 353
           PR++ L  +++K + K       LV  +  F +++    +D
Sbjct: 438 PRHRFL--VELKKVRKGPFPLSSLVPNDESFCQQWAGTSVD 474

[Close]

BLAST of PI0011993.1 vs. ExPASy Swiss-Prot
Match: F4JVI3 (Transcription termination factor MTERF5, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=MTERF5 PE=1 SV=1)

HSP 1 Score: 61.6 bits (148), Expect = 2.1e-08
Identity = 71/305 (23.28%), Postives = 126/305 (41.31%), Query Frame = 0


Query: 71  FLKSHGFENSQIAKLVSKRPSILESRVSTNLKPKFDFLQEIGFVGPSLRKLLVSNPSILE 130
           +L   G    QI  +  K  +     +   +KP  +FL ++G     +  +L   P I  
Sbjct: 202 YLLDLGLNLEQIKTITRKFAAFPYYSLDGKIKPVVEFLLDLGIPKSDIPTILCKRPQICG 261

Query: 131 RSLDSHLKPTFFFLKEILESGEQETVAICRSSRLLTCDSKGTTKSNIDVFASEGVLSRTI 190
            SL  +LKPT  FL+ +     Q    I R   +LT   +  T S ++  +  G+    I
Sbjct: 262 ISLTDNLKPTMAFLETLGIDKNQWAKIISRFPAILTYSRQKLT-STVEFLSQTGLTEEQI 321

Query: 191 AKLIALNPRFPMQKF-DRVIHAVKTVKELGIEPKDRLFVYAVSAVVSMPYSTWEKKIN-- 250
            +++   P        D++   ++  + L ++    + ++       +   +  K +   
Sbjct: 322 GRILTRCPNIMSYSVEDKLRPTMEYFRSLNVDV--AVLLHRCPQTFGLSIESNLKPVTEF 381

Query: 251 -VLKSFGWSENEIFKAFKSDPLILTCSEEKMRDVADFCFNTAKLDPGTVISYPRFFKLSL 310
            + K FG  E  I  + +   L     +E +    D+ F T       ++ +P+FF  SL
Sbjct: 382 FLEKGFGLDEIGIMIS-RYGALYTFSLKENVMPKWDY-FQTMDYPKSELVKFPQFFGYSL 441

Query: 311 DKRIRPRYKVLEVLKVKNLLKNIKIARVLVQGEREFVEKYVVKHLDENPNLMDIYQGNVT 370
            +RI+PRY++++   V+ LL      +VL     EF EK V K       +M +   NV 
Sbjct: 442 QERIKPRYELVQRSGVRLLLN-----QVLSLSGIEF-EKVVKK------KMMKLVSNNVI 489

Query: 371 AETKS 372
           AE  S
Sbjct: 502 AEQSS 489

[Close]

BLAST of PI0011993.1 vs. ExPASy Swiss-Prot
Match: F4IHL3 (Transcription termination factor MTERF2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=MTERF2 PE=3 SV=1)

HSP 1 Score: 57.0 bits (136), Expect = 5.3e-07
Identity = 59/278 (21.22%), Postives = 110/278 (39.57%), Query Frame = 0


Query: 66  EALIGFLKSHGFENSQIAKLVSKRPSILESRVSTNLKPKFDFLQEIGFVGPSLRKLLVSN 125
           E  I +LK  G    ++ +L++ +P ++   +    KP   +   +G     ++++LV  
Sbjct: 353 EKKINYLKEFGLSTEEVGRLLAYKPHLMGCSIEERWKPLVKYFYYLGIPKEGMKRILVVK 412

Query: 126 PSILERSLDSHLKPTFFFLKEILESGEQETVAICRSSRLLTCD-SKGTTKSNIDVFASEG 185
           P +    L+  + P   FL+E+    E     + +   LLT    K      I +    G
Sbjct: 413 PILYCIDLEKTIAPKVRFLQEMGIPNEAIGNMLVKFPSLLTNSLYKKIRPVVIFLLTRAG 472

Query: 186 VLSRTIAKLIALNPRFPMQKFDRVIHAVKTVKELGIEPKDRLFVYAVSAVVSMPYSTWEK 245
           V  + I K+IA++P                   LG     +L                E 
Sbjct: 473 VTQKDIGKVIAMDPAL-----------------LGCSIGTKL----------------EP 532

Query: 246 KINVLKSFGWSENEIFKAFKSDPLILTCSEEKMRDVADFCFNTAKLDPGTVISYPRFFKL 305
            +    S G    ++ +     P++L  + + +R    +   T       +I +PRFF  
Sbjct: 533 NMRYYISLGIRFYQLGEMIADFPMLLRYNVDNLRPKYRYLRRTMIRPLQDLIEFPRFFSY 592

Query: 306 SLDKRIRPRYKVLEVLKVKNLLKNIKIARVLVQGEREF 343
           SL++RI PR+ ++    V+N + N K+  +L   + EF
Sbjct: 593 SLERRIIPRHTIM----VENRV-NFKLRYMLACTDEEF 592

[Close]

BLAST of PI0011993.1 vs. ExPASy Swiss-Prot
Match: Q9C6A1 (Transcription termination factor MTERF15, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=MTERF15 PE=2 SV=1)

HSP 1 Score: 55.1 bits (131), Expect = 2.0e-06
Identity = 57/291 (19.59%), Postives = 112/291 (38.49%), Query Frame = 0


Query: 64  KYEALIGFLKSHGFENSQIAKLVSKRPSILESRVSTNLKPKFDFLQEIGFVGPSLRKLLV 123
           K+   +  LKS GF +S +++++S  P +L       ++ K +FL  IG    ++ +   
Sbjct: 146 KFNECVRVLKSLGFCDSTVSRILSSFPGVLLVN-EIEIRRKIEFLVGIGIARDNIERFFH 205

Query: 124 SNPSILERSLDSHLKPTFFFLKEILESGEQETVAICRSSRLLTCDSKGTTKSNIDVFASE 183
             P +L    ++ LKP                                     +D F   
Sbjct: 206 VFPEVLGIGTETRLKPL------------------------------------LDEFMKM 265

Query: 184 GVLSRTIAKLIALNPR---FPMQKFDRVIHAVKTVKELGIEPKDRLFVYAVSAVVSMPYS 243
           G     + K IA  PR     + +  R +  + T+K      ++ + V  +S        
Sbjct: 266 GFSKDDVKKEIAREPRVLGLELGELPRCLELINTLK-----CREVIRVSIISEGAFRAGF 325

Query: 244 TWEKKINVLKSFGWSENEIFKAFKSDPLILTCSEEKMRDVADFCFNTAKLDPGTVISYPR 303
             + +++ L  +G    + FK    +P ++    E +    +F  N        +   P 
Sbjct: 326 EVKLRVDCLCKYGLIRRDAFKVVWKEPRVILYEIEDIEKKIEFLTNRMGFHINCLADVPE 385

Query: 304 FFKLSLDKRIRPRYKVLEVLKVKNLLK-NIKIARVLVQGEREFVEKYVVKH 351
           +  ++L K+I PRY V++ LK+K  L  +I +  ++    + F   YV+ +
Sbjct: 386 YLGVNLQKQIVPRYNVIDYLKLKGGLGCDIGLKGLIKPSMKRFYNLYVMPY 394

[Close]

BLAST of PI0011993.1 vs. ExPASy Swiss-Prot
Match: Q9SZL6 (Transcription termination factor MTERF6, chloroplastic/mitochondrial OS=Arabidopsis thaliana OX=3702 GN=MTERF6 PE=2 SV=1)

HSP 1 Score: 52.0 bits (123), Expect = 1.7e-05
Identity = 41/163 (25.15%), Postives = 70/163 (42.94%), Query Frame = 0


Query: 68  LIGFLKSHGFENSQIAKLVSKRPSILESRVSTNLKPKFDFLQEIGF-VGPSLRKLLVSNP 127
           L+ F ++ G   +Q+ K++   P ++   + T L     FL  +G      + K+LV NP
Sbjct: 117 LLAFFQALGVPETQLGKMILFNPRLISYSIDTKLTVIVSFLASLGLDQDGMIGKVLVKNP 176

Query: 128 SILERSLDSHLKPTFFFLKEILESGEQETVAICRSSRLLTC-DSKGTTKSNIDVFASEGV 187
            ++  S+D  L+PT  FLK  +   E    ++  +   L C D     K N D     G 
Sbjct: 177 FLMGYSVDKRLRPTTEFLKSSVGLSEDGIKSVVMNFPQLLCRDVNKILKPNYDYLKECGF 236

Query: 188 LSRTIAKLIALNPRFPMQKFDRVIHAVKTVKELGIEPKDRLFV 229
               IA ++   P+            +K+VK   ++P+ R  V
Sbjct: 237 GDSQIATMVTGYPQI----------LIKSVKN-SLQPRIRFLV 268

[Close]

BLAST of PI0011993.1 vs. ExPASy TrEMBL
Match: A0A5A7SSP1 (Transcription termination factor MTERF5 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold35G003130 PE=3 SV=1)

HSP 1 Score: 532.7 bits (1371), Expect = 1.2e-147
Identity = 279/372 (75.00%), Postives = 309/372 (83.06%), Query Frame = 0


Query: 1   MSKISSTFLLHFIQKRFLNTISTSTLPLASVSTIEFLINTWGLDSESPSSTGRKLQINEK 60
           MS++SS+FLLHFIQ RFLNTI TSTLP +SVSTI+FL N+ GL SESP S  RKLQ +E+
Sbjct: 1   MSRLSSSFLLHFIQNRFLNTIYTSTLPFSSVSTIQFLKNSCGLSSESPYSAARKLQFDEE 60

Query: 61  DSHKYEALIGFLKSHGFENSQIAKLVSKRPSILESRVSTNLKPKFDFLQEIGFVGPSLRK 120
              KYEA IGFLKSHGF+NSQIAKLVSK PSIL+S+VSTNLKPKF+FLQEIG VGP L K
Sbjct: 61  SIQKYEATIGFLKSHGFDNSQIAKLVSKHPSILQSKVSTNLKPKFEFLQEIGLVGPLLPK 120

Query: 121 LLVSNPSILERSLDSHLKPTFFFLKEILESGEQETVAICRSSRLLTCDSKGTTKSNIDVF 180
           L+ SNP IL RSLDSHLKP+FFFLKEILES  Q T AICRS+RLLT D KG  K N+DV 
Sbjct: 121 LIASNPYILLRSLDSHLKPSFFFLKEILESDVQVTAAICRSARLLTFDFKGILKPNVDVL 180

Query: 181 ASEGVLSRTIAKLIALNPRFPMQKFDRVIHAVKTVKELGIEPKDRLFVYAVSAVVSMPYS 240
            SEG+ SR IAK+IAL P   MQ+ DR+I AVKTVKELG+EPK R+FVYAV   +S+  S
Sbjct: 181 VSEGMPSRNIAKMIALQPIAIMQRVDRMIQAVKTVKELGVEPKARMFVYAVLIRLSLSDS 240

Query: 241 TWEKKINVLKSFGWSENEIFKAFKSDPLILTCSEEKMRDVADFCFNTAKLDPGTVISYPR 300
            W  KINVLKS GWSE EIF AFK DP  L CSE+KMRDVADFCFNTAKLDPGTVISYP 
Sbjct: 241 NWTNKINVLKSLGWSEKEIFAAFKKDPNYLGCSEKKMRDVADFCFNTAKLDPGTVISYPV 300

Query: 301 FFKLSLDKRIRPRYKVLEVLKVKNLLKNIKIARVLVQGEREFVEKYVVKHLDENPNLMDI 360
           FFK S+DKR+RPRYKVLEVLKVKNLLKN KIA VL+QGE+ FVEKYVVKHLDE PNLMDI
Sbjct: 301 FFKSSVDKRLRPRYKVLEVLKVKNLLKNKKIAGVLLQGEKTFVEKYVVKHLDEIPNLMDI 360

Query: 361 YQGNVTAETKSV 373
           Y+GNV AETKSV
Sbjct: 361 YRGNVEAETKSV 372

[Close]

BLAST of PI0011993.1 vs. ExPASy TrEMBL
Match: A0A5A7SU45 (Transcription termination factor MTERF5 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold35G002650 PE=3 SV=1)

HSP 1 Score: 526.2 bits (1354), Expect = 1.1e-145
Identity = 270/372 (72.58%), Postives = 312/372 (83.87%), Query Frame = 0


Query: 1   MSKISSTFLLHFIQKRFLNTISTSTLPLASVSTIEFLINTWGLDSESPSSTGRKLQINEK 60
           M K SSTFLLHFIQKRFLNT+STSTLPLASVSTI+FL N+ GL S SP S GRKLQ +EK
Sbjct: 1   MFKFSSTFLLHFIQKRFLNTVSTSTLPLASVSTIQFLTNSCGLSSGSPISRGRKLQFDEK 60

Query: 61  DSHKYEALIGFLKSHGFENSQIAKLVSKRPSILESRVSTNLKPKFDFLQEIGFVGPSLRK 120
           +  +YEA+IGF KSHGFENSQIAKLVS++PSIL+S VST+LKPKFDFLQEIG VGP L K
Sbjct: 61  NIQQYEAVIGFFKSHGFENSQIAKLVSRQPSILQSTVSTDLKPKFDFLQEIGIVGPLLPK 120

Query: 121 LLVSNPSILERSLDSHLKPTFFFLKEILESGEQETVAICRSSRLLTCDSKGTTKSNIDVF 180
           +++SNP IL +S++S LKPTF  +KE+LES E+   AICR+S +L+ +SKGT +SNIDV 
Sbjct: 121 VILSNPGILFKSVNSQLKPTFCLIKEMLESDEKVAAAICRASWILSANSKGTMRSNIDVL 180

Query: 181 ASEGVLSRTIAKLIALNPRFPMQKFDRVIHAVKTVKELGIEPKDRLFVYAVSAVVSMPYS 240
            SEGV S  IAK+IALNPR  M+  DR+IHAVKTVKELG+EPKDR FVYAVSAV SM  S
Sbjct: 181 VSEGVPSTNIAKMIALNPRSIMRNVDRIIHAVKTVKELGVEPKDRTFVYAVSAVGSMSDS 240

Query: 241 TWEKKINVLKSFGWSENEIFKAFKSDPLILTCSEEKMRDVADFCFNTAKLDPGTVISYPR 300
           +W+KKINV+KS GWSE EIF AFK DP  LTCSEEKMRDVADFCFNTAKLDP +VI YP+
Sbjct: 241 SWKKKINVMKSLGWSEKEIFTAFKKDPTFLTCSEEKMRDVADFCFNTAKLDPESVIIYPK 300

Query: 301 FFKLSLDKRIRPRYKVLEVLKVKNLLKNIKIARVLVQGEREFVEKYVVKHLDENPNLMDI 360
           FF+ S+DKR++PRYKV EVLKVKNLLKN  IAR  ++GEREFVE  VVKHLDE PNLMDI
Sbjct: 301 FFQCSVDKRLKPRYKVFEVLKVKNLLKNKNIARWFIRGEREFVENNVVKHLDEIPNLMDI 360

Query: 361 YQGNVTAETKSV 373
           Y+GN  +ETKSV
Sbjct: 361 YRGNDASETKSV 372

[Close]

BLAST of PI0011993.1 vs. ExPASy TrEMBL
Match: A0A5A7SW09 (Transcription termination factor MTERF2 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold65G001070 PE=3 SV=1)

HSP 1 Score: 523.5 bits (1347), Expect = 7.4e-145
Identity = 276/373 (73.99%), Postives = 307/373 (82.31%), Query Frame = 0


Query: 1   MSKISSTFLLHFIQKRFLNTISTSTLPLASVSTIEFLINTWGLDSESPSSTGRKLQINEK 60
           MSKISS+FLLHFIQ RFLNT+ST+TLPL SVSTI+FL N+ GL S SP+S GRKLQ +EK
Sbjct: 1   MSKISSSFLLHFIQNRFLNTVSTTTLPLPSVSTIQFLTNSCGLSSGSPTSAGRKLQFDEK 60

Query: 61  DSHKYEALIGFLKSHGFENSQIAKLVSKRPSILESRVSTNLKPKFDFLQEIGFVGPSLRK 120
              +Y A+I FLKS GFEN+QIAKLVS+ PSIL+S+VS NLKPKF+FLQEIGFVGP L K
Sbjct: 61  HIQQYGAIIDFLKSQGFENTQIAKLVSRGPSILQSKVSNNLKPKFEFLQEIGFVGPLLCK 120

Query: 121 LLVSNPSILERSLDSHLKPTFFFLKEILESGEQETVAICRSSRLLTCDSKGTTKSNIDVF 180
           L+VS P IL RSLDS LKP+FFFLKEILES EQ T AI R   LL CD KG  K +IDV 
Sbjct: 121 LIVSRPRILNRSLDSQLKPSFFFLKEILESDEQVTTAIFRYPSLLICDLKGDLKPHIDVL 180

Query: 181 ASEGVLSRTIAKLIALNPRFPMQKFDRVIHAVKTVKELGIEPKDRLFVYAVSAVVSMPYS 240
            SEGV SR I+++I+L PR  MQK DR+I AVKTVKELGIEPK R FVYAV   +SM  S
Sbjct: 181 VSEGVPSRNISRMISLQPRAIMQKVDRLIPAVKTVKELGIEPKARTFVYAVVVRLSMSDS 240

Query: 241 TWEKKINVLKSFGWSENEIFKAFKSDPLILTCSEEKMRDVADFCFNTAKLDPGTVISYPR 300
           TW+KKINV+KS GWS+ EIF AFK  P  L CSEEK+RDVADFCFNTAKLDPGT+ISYP+
Sbjct: 241 TWKKKINVMKSLGWSDKEIFTAFKRHPNYLGCSEEKIRDVADFCFNTAKLDPGTLISYPK 300

Query: 301 FFKLSLDKRIRPRYKVLEVLKVKNLLKNIKIARVLVQGEREFVEKYVVKHLDENPNLMDI 360
            FKLS DKR+RPRYKVLEVLKVKNLLKN KIA VLV+GER FVEKYVVKHLDE PNLMDI
Sbjct: 301 LFKLSFDKRLRPRYKVLEVLKVKNLLKNKKIASVLVEGERRFVEKYVVKHLDEIPNLMDI 360

Query: 361 YQGNVTAETKSVL 374
           Y GNV AETKSVL
Sbjct: 361 YVGNVEAETKSVL 373

[Close]

BLAST of PI0011993.1 vs. ExPASy TrEMBL
Match: A0A5D3CXX8 (Transcription termination factor MTERF2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold35G003080 PE=3 SV=1)

HSP 1 Score: 522.7 bits (1345), Expect = 1.3e-144
Identity = 275/373 (73.73%), Postives = 307/373 (82.31%), Query Frame = 0


Query: 1   MSKISSTFLLHFIQKRFLNTISTSTLPLASVSTIEFLINTWGLDSESPSSTGRKLQINEK 60
           MSK+SS+FLLHFIQ RFLNT+ST+TLPL SVSTI+FL N+ GL S SP+S GRKLQ +EK
Sbjct: 1   MSKLSSSFLLHFIQNRFLNTVSTTTLPLPSVSTIQFLTNSCGLSSGSPTSAGRKLQFDEK 60

Query: 61  DSHKYEALIGFLKSHGFENSQIAKLVSKRPSILESRVSTNLKPKFDFLQEIGFVGPSLRK 120
              +Y A+I FLKS GFEN+QIAKLVS+ PSIL+S+VS NLKPKF+FLQEIGFVGP L K
Sbjct: 61  HIQQYGAIIDFLKSQGFENTQIAKLVSRGPSILQSKVSNNLKPKFEFLQEIGFVGPLLCK 120

Query: 121 LLVSNPSILERSLDSHLKPTFFFLKEILESGEQETVAICRSSRLLTCDSKGTTKSNIDVF 180
           L+VS P IL RSLDS LKP+FFFLKEILES EQ T AI R   LL CD KG  K +IDV 
Sbjct: 121 LIVSRPRILNRSLDSQLKPSFFFLKEILESDEQVTTAIFRYPSLLICDLKGDLKPHIDVL 180

Query: 181 ASEGVLSRTIAKLIALNPRFPMQKFDRVIHAVKTVKELGIEPKDRLFVYAVSAVVSMPYS 240
            SEGV SR I+++I+L PR  MQK DR+I AVKTVKELGIEPK R FVYAV   +SM  S
Sbjct: 181 VSEGVPSRNISRMISLQPRAIMQKVDRLIPAVKTVKELGIEPKARTFVYAVVVRLSMSDS 240

Query: 241 TWEKKINVLKSFGWSENEIFKAFKSDPLILTCSEEKMRDVADFCFNTAKLDPGTVISYPR 300
           TW+KKINV+KS GWS+ EIF AFK  P  L CSEEK+RDVADFCFNTAKLDPGT+ISYP+
Sbjct: 241 TWKKKINVMKSLGWSDKEIFTAFKRHPNYLGCSEEKIRDVADFCFNTAKLDPGTLISYPK 300

Query: 301 FFKLSLDKRIRPRYKVLEVLKVKNLLKNIKIARVLVQGEREFVEKYVVKHLDENPNLMDI 360
            FKLS DKR+RPRYKVLEVLKVKNLLKN KIA VLV+GER FVEKYVVKHLDE PNLMDI
Sbjct: 301 LFKLSFDKRLRPRYKVLEVLKVKNLLKNKKIASVLVEGERRFVEKYVVKHLDEIPNLMDI 360

Query: 361 YQGNVTAETKSVL 374
           Y GNV AETKSVL
Sbjct: 361 YVGNVEAETKSVL 373

[Close]

BLAST of PI0011993.1 vs. ExPASy TrEMBL
Match: A0A1S3BDE1 (transcription termination factor MTERF2, chloroplastic-like OS=Cucumis melo OX=3656 GN=LOC103488812 PE=3 SV=1)

HSP 1 Score: 522.7 bits (1345), Expect = 1.3e-144
Identity = 275/373 (73.73%), Postives = 307/373 (82.31%), Query Frame = 0


Query: 1   MSKISSTFLLHFIQKRFLNTISTSTLPLASVSTIEFLINTWGLDSESPSSTGRKLQINEK 60
           MSK+SS+FLLHFIQ RFLNT+ST+TLPL SVSTI+FL N+ GL S SP+S GRKLQ +EK
Sbjct: 1   MSKLSSSFLLHFIQNRFLNTVSTTTLPLPSVSTIQFLTNSCGLSSGSPTSAGRKLQFDEK 60

Query: 61  DSHKYEALIGFLKSHGFENSQIAKLVSKRPSILESRVSTNLKPKFDFLQEIGFVGPSLRK 120
              +Y A+I FLKS GFEN+QIAKLVS+ PSIL+S+VS NLKPKF+FLQEIGFVGP L K
Sbjct: 61  HIQQYGAIIDFLKSQGFENTQIAKLVSRGPSILQSKVSNNLKPKFEFLQEIGFVGPLLCK 120

Query: 121 LLVSNPSILERSLDSHLKPTFFFLKEILESGEQETVAICRSSRLLTCDSKGTTKSNIDVF 180
           L+VS P IL RSLDS LKP+FFFLKEILES EQ T AI R   LL CD KG  K +IDV 
Sbjct: 121 LIVSRPRILNRSLDSQLKPSFFFLKEILESDEQVTTAIFRYPSLLICDLKGDLKPHIDVL 180

Query: 181 ASEGVLSRTIAKLIALNPRFPMQKFDRVIHAVKTVKELGIEPKDRLFVYAVSAVVSMPYS 240
            SEGV SR I+++I+L PR  MQK DR+I AVKTVKELGIEPK R FVYAV   +SM  S
Sbjct: 181 VSEGVPSRNISRMISLQPRAIMQKVDRLIPAVKTVKELGIEPKARTFVYAVVVRLSMSDS 240

Query: 241 TWEKKINVLKSFGWSENEIFKAFKSDPLILTCSEEKMRDVADFCFNTAKLDPGTVISYPR 300
           TW+KKINV+KS GWS+ EIF AFK  P  L CSEEK+RDVADFCFNTAKLDPGT+ISYP+
Sbjct: 241 TWKKKINVMKSLGWSDKEIFTAFKRHPNYLGCSEEKIRDVADFCFNTAKLDPGTLISYPK 300

Query: 301 FFKLSLDKRIRPRYKVLEVLKVKNLLKNIKIARVLVQGEREFVEKYVVKHLDENPNLMDI 360
            FKLS DKR+RPRYKVLEVLKVKNLLKN KIA VLV+GER FVEKYVVKHLDE PNLMDI
Sbjct: 301 LFKLSFDKRLRPRYKVLEVLKVKNLLKNKKIASVLVEGERRFVEKYVVKHLDEIPNLMDI 360

Query: 361 YQGNVTAETKSVL 374
           Y GNV AETKSVL
Sbjct: 361 YVGNVEAETKSVL 373

[Close]

BLAST of PI0011993.1 vs. NCBI nr
Match: KAA0034112.1 (transcription termination factor MTERF5 [Cucumis melo var. makuwa] >TYK15809.1 transcription termination factor MTERF5 [Cucumis melo var. makuwa])

HSP 1 Score: 532.7 bits (1371), Expect = 2.5e-147
Identity = 279/372 (75.00%), Postives = 309/372 (83.06%), Query Frame = 0


Query: 1   MSKISSTFLLHFIQKRFLNTISTSTLPLASVSTIEFLINTWGLDSESPSSTGRKLQINEK 60
           MS++SS+FLLHFIQ RFLNTI TSTLP +SVSTI+FL N+ GL SESP S  RKLQ +E+
Sbjct: 1   MSRLSSSFLLHFIQNRFLNTIYTSTLPFSSVSTIQFLKNSCGLSSESPYSAARKLQFDEE 60

Query: 61  DSHKYEALIGFLKSHGFENSQIAKLVSKRPSILESRVSTNLKPKFDFLQEIGFVGPSLRK 120
              KYEA IGFLKSHGF+NSQIAKLVSK PSIL+S+VSTNLKPKF+FLQEIG VGP L K
Sbjct: 61  SIQKYEATIGFLKSHGFDNSQIAKLVSKHPSILQSKVSTNLKPKFEFLQEIGLVGPLLPK 120

Query: 121 LLVSNPSILERSLDSHLKPTFFFLKEILESGEQETVAICRSSRLLTCDSKGTTKSNIDVF 180
           L+ SNP IL RSLDSHLKP+FFFLKEILES  Q T AICRS+RLLT D KG  K N+DV 
Sbjct: 121 LIASNPYILLRSLDSHLKPSFFFLKEILESDVQVTAAICRSARLLTFDFKGILKPNVDVL 180

Query: 181 ASEGVLSRTIAKLIALNPRFPMQKFDRVIHAVKTVKELGIEPKDRLFVYAVSAVVSMPYS 240
            SEG+ SR IAK+IAL P   MQ+ DR+I AVKTVKELG+EPK R+FVYAV   +S+  S
Sbjct: 181 VSEGMPSRNIAKMIALQPIAIMQRVDRMIQAVKTVKELGVEPKARMFVYAVLIRLSLSDS 240

Query: 241 TWEKKINVLKSFGWSENEIFKAFKSDPLILTCSEEKMRDVADFCFNTAKLDPGTVISYPR 300
            W  KINVLKS GWSE EIF AFK DP  L CSE+KMRDVADFCFNTAKLDPGTVISYP 
Sbjct: 241 NWTNKINVLKSLGWSEKEIFAAFKKDPNYLGCSEKKMRDVADFCFNTAKLDPGTVISYPV 300

Query: 301 FFKLSLDKRIRPRYKVLEVLKVKNLLKNIKIARVLVQGEREFVEKYVVKHLDENPNLMDI 360
           FFK S+DKR+RPRYKVLEVLKVKNLLKN KIA VL+QGE+ FVEKYVVKHLDE PNLMDI
Sbjct: 301 FFKSSVDKRLRPRYKVLEVLKVKNLLKNKKIAGVLLQGEKTFVEKYVVKHLDEIPNLMDI 360

Query: 361 YQGNVTAETKSV 373
           Y+GNV AETKSV
Sbjct: 361 YRGNVEAETKSV 372

[Close]

BLAST of PI0011993.1 vs. NCBI nr
Match: KAA0034158.1 (transcription termination factor MTERF5 [Cucumis melo var. makuwa] >TYK15761.1 transcription termination factor MTERF5 [Cucumis melo var. makuwa])

HSP 1 Score: 526.2 bits (1354), Expect = 2.3e-145
Identity = 270/372 (72.58%), Postives = 312/372 (83.87%), Query Frame = 0


Query: 1   MSKISSTFLLHFIQKRFLNTISTSTLPLASVSTIEFLINTWGLDSESPSSTGRKLQINEK 60
           M K SSTFLLHFIQKRFLNT+STSTLPLASVSTI+FL N+ GL S SP S GRKLQ +EK
Sbjct: 1   MFKFSSTFLLHFIQKRFLNTVSTSTLPLASVSTIQFLTNSCGLSSGSPISRGRKLQFDEK 60

Query: 61  DSHKYEALIGFLKSHGFENSQIAKLVSKRPSILESRVSTNLKPKFDFLQEIGFVGPSLRK 120
           +  +YEA+IGF KSHGFENSQIAKLVS++PSIL+S VST+LKPKFDFLQEIG VGP L K
Sbjct: 61  NIQQYEAVIGFFKSHGFENSQIAKLVSRQPSILQSTVSTDLKPKFDFLQEIGIVGPLLPK 120

Query: 121 LLVSNPSILERSLDSHLKPTFFFLKEILESGEQETVAICRSSRLLTCDSKGTTKSNIDVF 180
           +++SNP IL +S++S LKPTF  +KE+LES E+   AICR+S +L+ +SKGT +SNIDV 
Sbjct: 121 VILSNPGILFKSVNSQLKPTFCLIKEMLESDEKVAAAICRASWILSANSKGTMRSNIDVL 180

Query: 181 ASEGVLSRTIAKLIALNPRFPMQKFDRVIHAVKTVKELGIEPKDRLFVYAVSAVVSMPYS 240
            SEGV S  IAK+IALNPR  M+  DR+IHAVKTVKELG+EPKDR FVYAVSAV SM  S
Sbjct: 181 VSEGVPSTNIAKMIALNPRSIMRNVDRIIHAVKTVKELGVEPKDRTFVYAVSAVGSMSDS 240

Query: 241 TWEKKINVLKSFGWSENEIFKAFKSDPLILTCSEEKMRDVADFCFNTAKLDPGTVISYPR 300
           +W+KKINV+KS GWSE EIF AFK DP  LTCSEEKMRDVADFCFNTAKLDP +VI YP+
Sbjct: 241 SWKKKINVMKSLGWSEKEIFTAFKKDPTFLTCSEEKMRDVADFCFNTAKLDPESVIIYPK 300

Query: 301 FFKLSLDKRIRPRYKVLEVLKVKNLLKNIKIARVLVQGEREFVEKYVVKHLDENPNLMDI 360
           FF+ S+DKR++PRYKV EVLKVKNLLKN  IAR  ++GEREFVE  VVKHLDE PNLMDI
Sbjct: 301 FFQCSVDKRLKPRYKVFEVLKVKNLLKNKNIARWFIRGEREFVENNVVKHLDEIPNLMDI 360

Query: 361 YQGNVTAETKSV 373
           Y+GN  +ETKSV
Sbjct: 361 YRGNDASETKSV 372

[Close]

BLAST of PI0011993.1 vs. NCBI nr
Match: KAE8648636.1 (hypothetical protein Csa_009251 [Cucumis sativus])

HSP 1 Score: 525.4 bits (1352), Expect = 4.0e-145
Identity = 274/373 (73.46%), Postives = 312/373 (83.65%), Query Frame = 0


Query: 1   MSKISSTFLLHFIQKRFLNTISTSTLPLASVSTIEFLINTWGLDSESPSSTGRKLQINEK 60
           M KISS+ LLHF Q RFLNTISTSTLPL SVSTI+FL N+ GL S SP+S+GRKLQ +EK
Sbjct: 20  MFKISSSLLLHFTQNRFLNTISTSTLPLPSVSTIQFLTNSCGLSSGSPTSSGRKLQFDEK 79

Query: 61  DSHKYEALIGFLKSHGFENSQIAKLVSKRPSILESRVSTNLKPKFDFLQEIGFVGPSLRK 120
              +Y A+IGFLKS+GFEN QIAKLVS++PSIL+S VS NLKPKF+FLQEIGFVGP L K
Sbjct: 80  RIQQYGAIIGFLKSYGFENPQIAKLVSRQPSILQSGVSKNLKPKFEFLQEIGFVGPLLPK 139

Query: 121 LLVSNPSILERSLDSHLKPTFFFLKEILESGEQETVAICRSSRLLTCDSKGTTKSNIDVF 180
           +++SNP+IL RSLDSHLKP+F  +KE+L+S EQ T AICRSS LLT DSK   K NIDV 
Sbjct: 140 VILSNPAILLRSLDSHLKPSFRLIKEMLKSDEQVTAAICRSSWLLTYDSKRVIKPNIDVL 199

Query: 181 ASEGVLSRTIAKLIALNPRFPMQKFDRVIHAVKTVKELGIEPKDRLFVYAVSAVVSMPYS 240
            +EGV SR +AK+IALNPR  MQK DR+IHAVKTVKELG+EPKDR+F YAVSAVVSM  S
Sbjct: 200 VNEGVPSRNLAKMIALNPRTIMQKVDRMIHAVKTVKELGVEPKDRVFGYAVSAVVSMSES 259

Query: 241 TWEKKINVLKSFGWSENEIFKAFKSDPLILTCSEEKMRDVADFCFNTAKLDPGTVISYPR 300
            W+KKINV KS GW ENEIFKAFK+DP IL CSE K+RDV DFCFNTAKLD GTV+SYP 
Sbjct: 260 AWKKKINVFKSLGWPENEIFKAFKTDPYILACSEAKIRDVVDFCFNTAKLDLGTVVSYPM 319

Query: 301 FFKLSLDKRIRPRYKVLEVLKVKNLLKNIKIARVLVQGEREFVEKYVVKHLDENPNLMDI 360
            F+ S+DKR++PRYK+LEVLKVKNL KN KIA  L+ GER FVEKYVVKHLDE PNLMDI
Sbjct: 320 LFRRSVDKRLQPRYKLLEVLKVKNLFKNKKIAWPLLVGERIFVEKYVVKHLDEIPNLMDI 379

Query: 361 YQGNVTAETKSVL 374
           Y+GNV AETKSVL
Sbjct: 380 YRGNVAAETKSVL 392

[Close]

BLAST of PI0011993.1 vs. NCBI nr
Match: XP_031741754.1 (uncharacterized protein LOC116403946 [Cucumis sativus])

HSP 1 Score: 525.4 bits (1352), Expect = 4.0e-145
Identity = 274/373 (73.46%), Postives = 312/373 (83.65%), Query Frame = 0


Query: 1   MSKISSTFLLHFIQKRFLNTISTSTLPLASVSTIEFLINTWGLDSESPSSTGRKLQINEK 60
           M KISS+ LLHF Q RFLNTISTSTLPL SVSTI+FL N+ GL S SP+S+GRKLQ +EK
Sbjct: 1   MFKISSSLLLHFTQNRFLNTISTSTLPLPSVSTIQFLTNSCGLSSGSPTSSGRKLQFDEK 60

Query: 61  DSHKYEALIGFLKSHGFENSQIAKLVSKRPSILESRVSTNLKPKFDFLQEIGFVGPSLRK 120
              +Y A+IGFLKS+GFEN QIAKLVS++PSIL+S VS NLKPKF+FLQEIGFVGP L K
Sbjct: 61  RIQQYGAIIGFLKSYGFENPQIAKLVSRQPSILQSGVSKNLKPKFEFLQEIGFVGPLLPK 120

Query: 121 LLVSNPSILERSLDSHLKPTFFFLKEILESGEQETVAICRSSRLLTCDSKGTTKSNIDVF 180
           +++SNP+IL RSLDSHLKP+F  +KE+L+S EQ T AICRSS LLT DSK   K NIDV 
Sbjct: 121 VILSNPAILLRSLDSHLKPSFRLIKEMLKSDEQVTAAICRSSWLLTYDSKRVIKPNIDVL 180

Query: 181 ASEGVLSRTIAKLIALNPRFPMQKFDRVIHAVKTVKELGIEPKDRLFVYAVSAVVSMPYS 240
            +EGV SR +AK+IALNPR  MQK DR+IHAVKTVKELG+EPKDR+F YAVSAVVSM  S
Sbjct: 181 VNEGVPSRNLAKMIALNPRTIMQKVDRMIHAVKTVKELGVEPKDRVFGYAVSAVVSMSES 240

Query: 241 TWEKKINVLKSFGWSENEIFKAFKSDPLILTCSEEKMRDVADFCFNTAKLDPGTVISYPR 300
            W+KKINV KS GW ENEIFKAFK+DP IL CSE K+RDV DFCFNTAKLD GTV+SYP 
Sbjct: 241 AWKKKINVFKSLGWPENEIFKAFKTDPYILACSEAKIRDVVDFCFNTAKLDLGTVVSYPM 300

Query: 301 FFKLSLDKRIRPRYKVLEVLKVKNLLKNIKIARVLVQGEREFVEKYVVKHLDENPNLMDI 360
            F+ S+DKR++PRYK+LEVLKVKNL KN KIA  L+ GER FVEKYVVKHLDE PNLMDI
Sbjct: 301 LFRRSVDKRLQPRYKLLEVLKVKNLFKNKKIAWPLLVGERIFVEKYVVKHLDEIPNLMDI 360

Query: 361 YQGNVTAETKSVL 374
           Y+GNV AETKSVL
Sbjct: 361 YRGNVAAETKSVL 373

[Close]

BLAST of PI0011993.1 vs. NCBI nr
Match: KAA0034116.1 (transcription termination factor MTERF2 [Cucumis melo var. makuwa])

HSP 1 Score: 523.5 bits (1347), Expect = 1.5e-144
Identity = 276/373 (73.99%), Postives = 307/373 (82.31%), Query Frame = 0


Query: 1   MSKISSTFLLHFIQKRFLNTISTSTLPLASVSTIEFLINTWGLDSESPSSTGRKLQINEK 60
           MSKISS+FLLHFIQ RFLNT+ST+TLPL SVSTI+FL N+ GL S SP+S GRKLQ +EK
Sbjct: 1   MSKISSSFLLHFIQNRFLNTVSTTTLPLPSVSTIQFLTNSCGLSSGSPTSAGRKLQFDEK 60

Query: 61  DSHKYEALIGFLKSHGFENSQIAKLVSKRPSILESRVSTNLKPKFDFLQEIGFVGPSLRK 120
              +Y A+I FLKS GFEN+QIAKLVS+ PSIL+S+VS NLKPKF+FLQEIGFVGP L K
Sbjct: 61  HIQQYGAIIDFLKSQGFENTQIAKLVSRGPSILQSKVSNNLKPKFEFLQEIGFVGPLLCK 120

Query: 121 LLVSNPSILERSLDSHLKPTFFFLKEILESGEQETVAICRSSRLLTCDSKGTTKSNIDVF 180
           L+VS P IL RSLDS LKP+FFFLKEILES EQ T AI R   LL CD KG  K +IDV 
Sbjct: 121 LIVSRPRILNRSLDSQLKPSFFFLKEILESDEQVTTAIFRYPSLLICDLKGDLKPHIDVL 180

Query: 181 ASEGVLSRTIAKLIALNPRFPMQKFDRVIHAVKTVKELGIEPKDRLFVYAVSAVVSMPYS 240
            SEGV SR I+++I+L PR  MQK DR+I AVKTVKELGIEPK R FVYAV   +SM  S
Sbjct: 181 VSEGVPSRNISRMISLQPRAIMQKVDRLIPAVKTVKELGIEPKARTFVYAVVVRLSMSDS 240

Query: 241 TWEKKINVLKSFGWSENEIFKAFKSDPLILTCSEEKMRDVADFCFNTAKLDPGTVISYPR 300
           TW+KKINV+KS GWS+ EIF AFK  P  L CSEEK+RDVADFCFNTAKLDPGT+ISYP+
Sbjct: 241 TWKKKINVMKSLGWSDKEIFTAFKRHPNYLGCSEEKIRDVADFCFNTAKLDPGTLISYPK 300

Query: 301 FFKLSLDKRIRPRYKVLEVLKVKNLLKNIKIARVLVQGEREFVEKYVVKHLDENPNLMDI 360
            FKLS DKR+RPRYKVLEVLKVKNLLKN KIA VLV+GER FVEKYVVKHLDE PNLMDI
Sbjct: 301 LFKLSFDKRLRPRYKVLEVLKVKNLLKNKKIASVLVEGERRFVEKYVVKHLDEIPNLMDI 360

Query: 361 YQGNVTAETKSVL 374
           Y GNV AETKSVL
Sbjct: 361 YVGNVEAETKSVL 373

[Close]

BLAST of PI0011993.1 vs. TAIR 10
Match: AT5G07900.1 (Mitochondrial transcription termination factor family protein )

HSP 1 Score: 177.6 bits (449), Expect = 1.9e-44
Identity = 111/333 (33.33%), Postives = 175/333 (52.55%), Query Frame = 0


Query: 33  TIEFLINTWGLDSESPSSTGRKLQINEKDSHKYEALIGFLKSHGFENSQIAKLVSKRPSI 92
           T+ +LI++ GL  +S +   RKL ++  +  +   ++  L+ HGF  +QI+ LV KRP +
Sbjct: 71  TLNYLIDSCGLSPDSATVASRKLLLDSPE--RPNTVLNLLRDHGFTTAQISSLVKKRPVL 130

Query: 93  LESRVSTNLKPKFDFLQEIGFVGPSLRKLLVSNPSILERSLDSHLKPTFFFLKEILESGE 152
           L +   + L PK  F   IG     L + L S+P+IL RSL + L P++ FLK +L+S E
Sbjct: 131 LLANAESVLLPKLSFFLSIGVSKSLLARTLASDPTILTRSLVNQLIPSYNFLKSVLDSDE 190

Query: 153 QETVAICRSSRLLTCDSKGTTKSNIDVFASEGVLSRTIAKLIALNPRFPMQKFDRVIHAV 212
           +   A+ R++ +   D       NI+  A  GV  + I  L+   P   MQK        
Sbjct: 191 KIVAALRRTTWVFLEDHTKNLVPNINYMAETGVPEKCIKLLLTHFPEAVMQKNHEFQAIA 250

Query: 213 KTVKELGIEPKDRLFVYAVSAVVSM-PYSTWEKKINVLKSFGWSENEIFKAFKSDPLILT 272
           K  +E+G  P+   FV A+ A+      S W+K   V + +GWSE++I  AFK  P  + 
Sbjct: 251 KQAQEMGFNPQKSTFVLAIHALSGKGNKSIWDKCFEVYQRWGWSEDDIMCAFKKHPHCMM 310

Query: 273 CSEEKMRDVADFCFNTAKLDPGTVISYPRFFKLSLDKRIRPRYKVLEVLKVKNLLK-NIK 332
            SE K+    ++  N   + P ++   P     SL+KRI PR  V +VL    L+K +  
Sbjct: 311 LSERKINRTMEYFVNEMNMAPRSIAQCPVVLFFSLEKRIIPRCSVTKVLVSNGLVKEDWS 370

Query: 333 IARVLVQGEREFVEKYVVKHLDENPNLMDIYQG 364
           +  +LV  E+ F+EK V+K+ +E P LM++Y G
Sbjct: 371 LTSLLVPVEKVFLEKLVIKYEEELPELMNLYLG 401

[Close]

BLAST of PI0011993.1 vs. TAIR 10
Match: AT1G21150.1 (Mitochondrial transcription termination factor family protein )

HSP 1 Score: 149.1 bits (375), Expect = 7.3e-36
Identity = 95/340 (27.94%), Postives = 158/340 (46.47%), Query Frame = 0


Query: 27  PLASVSTIEFLINTWGLDSESPSSTGRKLQINEKDSHKYEALIGFLKSHGFENSQIAKLV 86
           P     T+ +L+++ GL  ES  S  R +++    S K ++++   K HGF N QI  ++
Sbjct: 52  PCLESFTVSYLVDSCGLSLESAKSNSRFVKL--VSSKKPDSVLALFKDHGFTNDQITSVI 111

Query: 87  SKRPSILESRVSTNLKPKFDFLQEIGFVGPSLRKLLVSNPSILERSLDSHLKPTFFFLKE 146
              P +L       + PK  F   IGF      K++ S+P +L  SL   L P +  LK 
Sbjct: 112 KSFPRVLSLSPEDVISPKLMFFSSIGFSTSDTAKMISSSPKMLSYSLHKRLIPCYDSLKS 171

Query: 147 ILESGEQETVAICRSSRLLTCDSKGTTKSNIDVFASEGVLSRTIAKLIALNPRFPMQKFD 206
           IL   E     + R  R  +          + +    GV  ++I  L+  +P     +  
Sbjct: 172 ILVEEESVVKCLKRGIRCFSLKITHCVSLRVSICRELGVPDKSIKWLVQASPFTFFSRER 231

Query: 207 RVIHAVKTVKELGIEPKDRLFVYAVSAVVSMPYSTWEKKINVLKSFGWSENEIFKAFKSD 266
           R    +  V   G +PK   FV+A+ A      S  E+K  + + FGWS+ +   A    
Sbjct: 232 RFNEVLNRVCSYGFDPKKAGFVHAMVAFDCTSESAMERKFKLFQCFGWSKEDFVAAIMRF 291

Query: 267 PLILTCSEEKMRDVADFCFNTAKLDPGTVISYPRFFKLSLDKRIRPRYKVLEVLKVKNLL 326
           P  +T S+EK+    ++  N   L    +++ P    LS++KRI+PR +V+ +L  K L+
Sbjct: 292 PNCVTVSDEKIMYTLEYLVNNIGLQARDIVARPVVLSLSMEKRIKPRNQVISLLLSKGLV 351

Query: 327 K--NIKIARVLVQGEREFVEKYVVKHLDENPNLMDIYQGN 365
           K  +I    +L     EF++K+V+K+ DE P L+  +  N
Sbjct: 352 KKEDINYFTILKLKSSEFMDKFVLKYQDEMPQLVQPFTSN 389

[Close]

BLAST of PI0011993.1 vs. TAIR 10
Match: AT5G64950.1 (Mitochondrial transcription termination factor family protein )

HSP 1 Score: 129.4 bits (324), Expect = 6.0e-30
Identity = 88/303 (29.04%), Postives = 148/303 (48.84%), Query Frame = 0


Query: 58  NEKDSHKYEALIGFLKSHGFENSQIAKLVSKRPSILESRVSTNLKPKFDFLQEIGFVGPS 117
           N K   +  ++I  LKS+ F ++QI K +   P ++   V   L+PK  F ++IGF G  
Sbjct: 64  NLKSLEQPRSVIQMLKSYSFSDTQIQKSIRVHPRMMFYNVEKILEPKLRFFKDIGFTGSG 123

Query: 118 LRKLLVSNPSILERSLDSHLKPTFFFLKEILESGEQETVAICRSS--RLLTCDSKGTTKS 177
           L K +  N S++  SL   L PT   LK I+    ++   I       LL+ D       
Sbjct: 124 LGKFVSQNSSVVGVSLVKKLIPTVEILKSIVAPKHEDLPVILSRCGWLLLSRDPNLFLLP 183

Query: 178 NIDVFASEGVLSRTIAKLIALNPRFPMQKFDRVIHAVKTVKELGIEPKDRLFVYAVSAVV 237
           NI    + G++   +A L+   PR      +++   V    +LG     R+ V+AV ++ 
Sbjct: 184 NISYLETCGIVGSQLASLLRRQPRIFNLSEEKLRGYVSRALDLGFTLNSRMLVHAVISLS 243

Query: 238 SMPYSTWEKKINVLKSFGWSENEIFKAFKSDPLILTCSEEKMRDVADFCFNTAKLDPGTV 297
           S+   T+++K+ +  + G+SE+EI    +  P ++ CSE+K+    +F      L+   +
Sbjct: 244 SLSEKTFDRKVKLFMANGFSEDEITDIIRRSPGLIRCSEDKLTLGFEFYLKRMGLEREAL 303

Query: 298 ISYPRFFKLSLDKRIRPRYKVLEVLKVKNLL-----KNIKIARVLVQGEREFVEKYVVKH 354
              P     +L+KR+ PR KVL++L+ K LL     K   +  ++   E  F+EKYVV+ 
Sbjct: 304 AKRPCVLSYNLEKRVIPRLKVLQILREKGLLLKEEKKKKNMVGIVEMTEEAFLEKYVVRF 363

[Close]

BLAST of PI0011993.1 vs. TAIR 10
Match: AT3G46950.1 (Mitochondrial transcription termination factor family protein )

HSP 1 Score: 122.1 bits (305), Expect = 9.5e-28
Identity = 106/424 (25.00%), Postives = 187/424 (44.10%), Query Frame = 0


Query: 12  FIQKRFLNTISTSTLPLASVSTIEFLINTWGLDSESPSSTGRKLQINEKDSHKYEALIGF 71
           F  K F +TI+  + P  S  T+ +L+ + GL  +   +  +K+   +K +   ++++  
Sbjct: 33  FTTKSFSSTIAKDSSPKGSTFTVSYLVESLGLTKKLAETISKKVTFEDKVNP--DSVLNL 92

Query: 72  LKSHGFENSQIAKLVSKRPSILESRVSTNLKPKFDFLQEIGFVGPSLRKLLVSNPSILER 131
           L+S+GF++SQI++++   P +L +    +L+PK  FL+  G     + +++ + P+IL++
Sbjct: 93  LRSNGFKDSQISRIIRAYPRLLVTDAEKSLRPKLQFLKSRGASSSEVIEIVSNVPTILDK 152

Query: 132 SLDSHLKPTFFFLKEILESGEQETVAICRSSRLLTCDSKGTTKSNIDVFASEGVLSRTIA 191
             +  +   + F+K+I++ G+   ++ C   +      KG    NI V    GV  + + 
Sbjct: 153 KGEESVSLYYDFVKDIMQDGKSLCIS-CPEGK------KGNRIRNISVLRELGVPQKLLF 212

Query: 192 KLI--ALNPRFPMQKFDRVIHAVKTVKELGIEPKDRLFVYAVSAVVSMPYSTWEKKINVL 251
            L+     P    +KF+    ++K V ++G +P    FV A+  V  M   T E+K+NV 
Sbjct: 213 SLLISRYQPVCGKEKFE---ESLKKVVDMGFDPAKSKFVEALHVVYEMSEKTIEEKVNVY 272

Query: 252 KSFGWSENEIFKAFKSDPLILTCSEEK---MRDVADFC-------FNTAKLDP------- 311
           K  G+SE EI+  FK  P  L  SE+K   M +    C        +  K  P       
Sbjct: 273 KRLGFSEAEIWAIFKKWPYFLKFSEKKIILMFETLKKCGLVEEEIISVLKSRPQCIRSSE 332

Query: 312 -----------------------------------------------------GTVISYP 362
                                                                  V+  P
Sbjct: 333 QKILDSIEMFLGLGFSRDDFKMMVKRYPCCTAYSGETLRKKFEVLVKMMNWPLEAVVMIP 392

[Close]

BLAST of PI0011993.1 vs. TAIR 10
Match: AT1G61990.1 (Mitochondrial transcription termination factor family protein )

HSP 1 Score: 106.7 bits (265), Expect = 4.1e-23
Identity = 99/406 (24.38%), Postives = 183/406 (45.07%), Query Frame = 0


Query: 13  IQKRFLNTISTSTLPLASVS----------TIEFLINTWGLDSESPSSTGRKLQINEKDS 72
           +Q  F+ + S S+   A VS          T+ +L+++ GL  +   S  RK+   +K +
Sbjct: 24  VQNAFVLSNSFSSARAADVSIRDGRKGKNFTVSYLVDSLGLSKKLAESISRKVSFEDKVN 83

Query: 73  HKYEALIGFLKSHGFENSQIAKLVSKRPSILESRVSTNLKPKFDFLQEIGFVGPSLRKLL 132
              ++++   +S+GF +SQI+ +++  P +L +     L  K   LQ  G     + +++
Sbjct: 84  P--DSVLSLFRSYGFTDSQISTIITDYPLLLVADAKKALGRKLQILQSRGASSSEITEIV 143

Query: 133 VSNPSILERSLDSHLKPTFFFLKEILESGEQETVAICRSSRLLTCDSKGTTKSNIDVFAS 192
            + P IL +     +   +  +K+I+       VA   SS  L   S+G    N+     
Sbjct: 144 STVPRILGK---KSITVYYDAVKDII-------VADTSSSYELPQGSQGNKIRNVSALRE 203

Query: 193 EGVLSRTIAKLIA--LNPRFPMQKFDRVIHAVKTVKELGIEPKDRLFVYAVSAVVSMPYS 252
            G+ SR +  L+     P    + FD    ++K V E+G +P    FV A+  +  M   
Sbjct: 204 LGMPSRLLLPLLVSKSQPVCGKENFDA---SLKKVVEMGFDPTTTKFVLALRMLYQMSEK 263

Query: 253 TWEKKINVLKSFGWSENEIFKAFKSDPLILTCSEEKMRDVA------------------- 312
           T E+K+ V +S G++ +++++ FK  P +L  S++K+   A                   
Sbjct: 264 TIEEKVVVFRSLGFTVDDVWEIFKKTPSVLKVSKKKILKSAETFLDLGYSRAEFLMMVKR 323

Query: 313 ----------------DFCFNTAKLDPGTVISYPRFFKLSLDKRIRPRYKVLEVLKVKNL 367
                           +F     K     ++ +P+ F  S++KRI PR  +LE L  K L
Sbjct: 324 YPPCIEYSVESVKKKNEFLVKKMKWPRNALVLHPQVFGYSMEKRIIPRCNILEALLSKGL 383

The following BLAST results are available for this feature:

BLAST of PI0011993.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FM80	8.4e-13	21.70	Transcription termination factor MTERF9, chloroplastic OS=Arabidopsis thaliana O...	[more]
F4JVI3	2.1e-08	23.28	Transcription termination factor MTERF5, chloroplastic OS=Arabidopsis thaliana O...	[more]
F4IHL3	5.3e-07	21.22	Transcription termination factor MTERF2, chloroplastic OS=Arabidopsis thaliana O...	[more]
Q9C6A1	2.0e-06	19.59	Transcription termination factor MTERF15, mitochondrial OS=Arabidopsis thaliana ...	[more]
Q9SZL6	1.7e-05	25.15	Transcription termination factor MTERF6, chloroplastic/mitochondrial OS=Arabidop...	[more]

BLAST of PI0011993.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7SSP1	1.2e-147	75.00	Transcription termination factor MTERF5 OS=Cucumis melo var. makuwa OX=1194695 G...	[more]
A0A5A7SU45	1.1e-145	72.58	Transcription termination factor MTERF5 OS=Cucumis melo var. makuwa OX=1194695 G...	[more]
A0A5A7SW09	7.4e-145	73.99	Transcription termination factor MTERF2 OS=Cucumis melo var. makuwa OX=1194695 G...	[more]
A0A5D3CXX8	1.3e-144	73.73	Transcription termination factor MTERF2 OS=Cucumis melo var. makuwa OX=1194695 G...	[more]
A0A1S3BDE1	1.3e-144	73.73	transcription termination factor MTERF2, chloroplastic-like OS=Cucumis melo OX=3...	[more]

BLAST of PI0011993.1 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0034112.1	2.5e-147	75.00	transcription termination factor MTERF5 [Cucumis melo var. makuwa] >TYK15809.1 t...	[more]
KAA0034158.1	2.3e-145	72.58	transcription termination factor MTERF5 [Cucumis melo var. makuwa] >TYK15761.1 t...	[more]
KAE8648636.1	4.0e-145	73.46	hypothetical protein Csa_009251 [Cucumis sativus]	[more]
XP_031741754.1	4.0e-145	73.46	uncharacterized protein LOC116403946 [Cucumis sativus]	[more]
KAA0034116.1	1.5e-144	73.99	transcription termination factor MTERF2 [Cucumis melo var. makuwa]	[more]

BLAST of PI0011993.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G07900.1	1.9e-44	33.33	Mitochondrial transcription termination factor family protein	[more]
AT1G21150.1	7.3e-36	27.94	Mitochondrial transcription termination factor family protein	[more]
AT5G64950.1	6.0e-30	29.04	Mitochondrial transcription termination factor family protein	[more]
AT3G46950.1	9.5e-28	25.00	Mitochondrial transcription termination factor family protein	[more]
AT1G61990.1	4.1e-23	24.38	Mitochondrial transcription termination factor family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003690	Transcription termination factor, mitochondrial/chloroplastic	SMART	SM00733	mt_12	coord: 83..114 e-value: 4.2E-5 score: 32.9 coord: 155..186 e-value: 2200.0 score: 1.3 coord: 191..221 e-value: 640.0 score: 5.4 coord: 225..255 e-value: 250.0 score: 8.6 coord: 119..150 e-value: 0.03 score: 23.5 coord: 260..291 e-value: 310.0 score: 7.8 coord: 292..323 e-value: 0.13 score: 21.4
IPR003690	Transcription termination factor, mitochondrial/chloroplastic	PFAM	PF02536	mTERF	coord: 70..221 e-value: 2.4E-19 score: 69.4 coord: 206..342 e-value: 1.5E-18 score: 66.8
IPR003690	Transcription termination factor, mitochondrial/chloroplastic	PANTHER	PTHR13068	CGI-12 PROTEIN-RELATED	coord: 11..365
IPR038538	MTERF superfamily, mitochondrial/chloroplastic	GENE3D	1.25.70.10	Transcription termination factor 3, mitochondrial	coord: 135..355 e-value: 5.7E-40 score: 139.1
None	No IPR available	PANTHER	PTHR13068:SF31	TRANSCRIPTION TERMINATION FACTOR MTERF15, MITOCHONDRIAL-LIKE	coord: 11..365

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
PI0011993	PI0011993	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
PI0011993.1-exon	PI0011993.1-exon-chr10:17167841..17168778	exon
PI0011993.1-exon	PI0011993.1-exon-chr10:17169420..17169603	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
PI0011993.1-cds	PI0011993.1-cds-chr10:17167841..17168778	CDS
PI0011993.1-cds	PI0011993.1-cds-chr10:17169420..17169603	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
PI0011993.1	PI0011993.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
biological_process	GO:0006353	DNA-templated transcription, termination
molecular_function	GO:0003690	double-stranded DNA binding