PI0010212.1 (mRNA) Melon (PI 482460) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGTCTACAACGAAACAGATGGATAAGGCCCACATAGACCGATTGGTAGAGATCGAAGAGCAGATGTTCTACCTGGTGGAAATTCCAGTCACCGTGCACTTCTTGAAAGGTTAAATTGAAGAAATTTTTGAGAAAGTTGATGCTACTGATGCAGTGACCGGTCGCCTCGACAAATTACTTATAAACGAGTTGTTGACAAGAGTCGACACTCTAGAGGCAAGGGCTGCAAGAACTGGTAACTACGAGCGTGGGGACAGTTCAACGGGCTCTGTTGCCCACATAGAGGAACGGGTTAGCGAGCTAGATAGCTCCCAAAAGTTGATCGTCGAGATGATAAATGGCATGTCAGAGGATTTTCGTGCCGCTCTTGACGTCGTCAGGAATGAGATTGCAGACGTGAGCGCGAGGGTGAACCTCACGATGCGAGCTATGGCAAACCAAGCTCCAACTGGAGGAGCTATACAAGTTAACAGGGTGAAAATCCCCGAACCCAAACCCTTCTGTGGGGCGCAAAAGCCTTAGAGAACTTTATATTTGACCTCGAACAATACTTTCGGGCCACAAACACTGTTGCGGAGGAAGCGAAAGTGACACTAGCAACGATGCACCTAGCCGAGGATGCAAAATTGTGGTGGCGGTCCCAGTATGTCGAGATCCAAGAAGGATGATGTACGATAGACACCTGAGACAGTTTAAAGAAAGAACTACGCTCACAGTTCTTCCTCGAGAATGTTAAAATCCTTGCTCGATGGAAGTTACGTGAATTAAAACACACACGGTAGCATTCGGGATTATGTGAAGCAGTTTACGGGATTGATGTTAGACATACGCGATATGTCCGAGAAAGACAAAGTTTTCTGTTTTGTCGAAGGCCTTAAACCATGGGCAAAAACCAAGCTATACGAACAGAAGGTCCAAGAACTCTCGTCGGCATACATAGTGGCAGAGCGACTATTTGACCTGTCCAGTGACTCTCAAGATGCGAGACGTCATTCAAGTTCCTCATTTGGAGGAAATAAGAACAATCATGCAAGTTTTCCAAAGGCCGAAGGAGGAGATAAACGATCTAGTGGTGATCGTAGGCCCTTTCAACCAAACATCGGGAACACGGGGCGAGGATAGAACCACCAAAACTCTCACAATCGTCCCCCTTCCTGTTTCATATGTAAGGGGCCGCACATGGCGAGAGAATGTCCGAATCGAACCACCTTTAACGCCTTTCAGGCTGCCTTAG ATGTCTACAACGAAACAGATGGATAAGGCCCACATAGACCGATTGGTAGAGATCGAAGAGCAGATGTTCTACCTGGTGGAAATTCCAGTCACCGTGCACTTCTTGAAAGAAATTTTTGAGAAAGTTGATGCTACTGATGCAGTGACCGGTCGCCTCGACAAATTACTTATAAACGAGTTGTTGACAAGAGTCGACACTCTAGAGGCAAGGGCTGCAAGAACTGGTAACTACGAGCGTGGGGACAGTTCAACGGGCTCTGTTGCCCACATAGAGGAACGGGTTAGCGAGCTAGATAGCTCCCAAAAGTTGATCGTCGAGATGATAAATGGCATGTCAGAGGATTTTCGTGCCGCTCTTGACGTCGTCAGGAATGAGATTGCAGACGTGAGCGCGAGGTGGCAGAGCGACTATTTGACCTGTCCAGTGACTCTCAAGATGCGAGACGTCATTCAAGTTCCTCATTTGGAGGAAATAAGAACAATCATGCAAGTTTTCCAAAGGCCGAAGGAGGAGATAAACGATCTAGTGGTGATCGTAGGCCCTTTCAACCAAACATCGGGAACACGGGGCGAGGATAGAACCACCAAAACTCTCACAATCGTCCCCCTTCCTGTTTCATATGTAAGGGGCCGCACATGGCGAGAGAATGTCCGAATCGAACCACCTTTAACGCCTTTCAGGCTGCCTTAG ATGTCTACAACGAAACAGATGGATAAGGCCCACATAGACCGATTGGTAGAGATCGAAGAGCAGATGTTCTACCTGGTGGAAATTCCAGTCACCGTGCACTTCTTGAAAGAAATTTTTGAGAAAGTTGATGCTACTGATGCAGTGACCGGTCGCCTCGACAAATTACTTATAAACGAGTTGTTGACAAGAGTCGACACTCTAGAGGCAAGGGCTGCAAGAACTGGTAACTACGAGCGTGGGGACAGTTCAACGGGCTCTGTTGCCCACATAGAGGAACGGGTTAGCGAGCTAGATAGCTCCCAAAAGTTGATCGTCGAGATGATAAATGGCATGTCAGAGGATTTTCGTGCCGCTCTTGACGTCGTCAGGAATGAGATTGCAGACGTGAGCGCGAGGTGGCAGAGCGACTATTTGACCTGTCCAGTGACTCTCAAGATGCGAGACGTCATTCAAGTTCCTCATTTGGAGGAAATAAGAACAATCATGCAAGTTTTCCAAAGGCCGAAGGAGGAGATAAACGATCTAGTGGTGATCGTAGGCCCTTTCAACCAAACATCGGGAACACGGGGCGAGGATAGAACCACCAAAACTCTCACAATCGTCCCCCTTCCTGTTTCATATGTAAGGGGCCGCACATGGCGAGAGAATGTCCGAATCGAACCACCTTTAACGCCTTTCAGGCTGCCTTAG MSTTKQMDKAHIDRLVEIEEQMFYLVEIPVTVHFLKEIFEKVDATDAVTGRLDKLLINELLTRVDTLEARAARTGNYERGDSSTGSVAHIEERVSELDSSQKLIVEMINGMSEDFRAALDVVRNEIADVSARWQSDYLTCPVTLKMRDVIQVPHLEEIRTIMQVFQRPKEEINDLVVIVGPFNQTSGTRGEDRTTKTLTIVPLPVSYVRGRTWRENVRIEPPLTPFRLP Homology
BLAST of PI0010212.1 vs. ExPASy TrEMBL
Match: A0A5D3DUL1 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold325G00940 PE=4 SV=1) HSP 1 Score: 174.5 bits (441), Expect = 5.2e-40 Identity = 101/166 (60.84%), Postives = 116/166 (69.88%), Query Frame = 0
BLAST of PI0010212.1 vs. ExPASy TrEMBL
Match: A0A5A7UCI7 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1510G00050 PE=4 SV=1) HSP 1 Score: 173.7 bits (439), Expect = 8.8e-40 Identity = 93/136 (68.38%), Postives = 109/136 (80.15%), Query Frame = 0
BLAST of PI0010212.1 vs. ExPASy TrEMBL
Match: A0A5A7TEV3 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold306G001730 PE=4 SV=1) HSP 1 Score: 164.5 bits (415), Expect = 5.3e-37 Identity = 100/196 (51.02%), Postives = 124/196 (63.27%), Query Frame = 0
BLAST of PI0010212.1 vs. ExPASy TrEMBL
Match: A0A5A7SKW3 (Retrotrans_gag domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold139G005100 PE=4 SV=1) HSP 1 Score: 164.1 bits (414), Expect = 7.0e-37 Identity = 91/138 (65.94%), Postives = 107/138 (77.54%), Query Frame = 0
BLAST of PI0010212.1 vs. ExPASy TrEMBL
Match: A0A5A7TP22 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold316G00510 PE=4 SV=1) HSP 1 Score: 164.1 bits (414), Expect = 7.0e-37 Identity = 90/136 (66.18%), Postives = 105/136 (77.21%), Query Frame = 0
BLAST of PI0010212.1 vs. NCBI nr
Match: KAA0062476.1 (uncharacterized protein E6C27_scaffold130G00660 [Cucumis melo var. makuwa] >TYK27406.1 uncharacterized protein E5676_scaffold325G00940 [Cucumis melo var. makuwa]) HSP 1 Score: 174.5 bits (441), Expect = 1.1e-39 Identity = 101/166 (60.84%), Postives = 116/166 (69.88%), Query Frame = 0
BLAST of PI0010212.1 vs. NCBI nr
Match: KAA0051251.1 (uncharacterized protein E6C27_scaffold2143G00070 [Cucumis melo var. makuwa] >TYK28094.1 uncharacterized protein E5676_scaffold1510G00050 [Cucumis melo var. makuwa]) HSP 1 Score: 173.7 bits (439), Expect = 1.8e-39 Identity = 93/136 (68.38%), Postives = 109/136 (80.15%), Query Frame = 0
BLAST of PI0010212.1 vs. NCBI nr
Match: KAA0041962.1 (reverse transcriptase [Cucumis melo var. makuwa] >TYK17897.1 reverse transcriptase [Cucumis melo var. makuwa]) HSP 1 Score: 164.5 bits (415), Expect = 1.1e-36 Identity = 100/196 (51.02%), Postives = 124/196 (63.27%), Query Frame = 0
BLAST of PI0010212.1 vs. NCBI nr
Match: KAA0031722.1 (uncharacterized protein E6C27_scaffold139G005100 [Cucumis melo var. makuwa]) HSP 1 Score: 164.1 bits (414), Expect = 1.4e-36 Identity = 91/138 (65.94%), Postives = 107/138 (77.54%), Query Frame = 0
BLAST of PI0010212.1 vs. NCBI nr
Match: KAA0045293.1 (uncharacterized protein E6C27_scaffold316G00510 [Cucumis melo var. makuwa]) HSP 1 Score: 164.1 bits (414), Expect = 1.4e-36 Identity = 90/136 (66.18%), Postives = 105/136 (77.21%), Query Frame = 0
The following BLAST results are available for this feature:
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
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