PI0010175.1 (mRNA) Melon (PI 482460) v1

Overview


Name	PI0010175.1
Type	mRNA
Organism	Cucumis metuliferus (Melon (PI 482460) v1)
Description	Poly(A)-specific ribonuclease
Location	chr03: 4555816 .. 4559001 (-)
Sequence length	2690
RNA-Seq Expression	PI0010175.1
Synteny	PI0010175.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GCAAGATGAGGGGAAACGGCGTCGTATAAGTAGTGGATGTGGATCCACATTGAAACGACGCCGGATTTGAAAGTGTAAACATCACTTTCCCCGTCGTCTACCAGGGAGGGCGTAGAGCAACGTTTTAGGGAGAGGGTGAGCATTAGGCAAACTCTCTCTCTCTCTATCTCTCCTCTCTCTCTATCAAACCCTGTTTTTCTCTCCCGCTGCTCCTCCTCCTCCTCCTCCGCCGTTGACCTCCTTCTCCTCCATTTCTACAACTCCCTTCTTCTAGATCTACCCTTCCCACCTTTCAATTTCACATTTTCAAGGTCAGATCTACTTACCCCTTTTTACATCACTTTATTTCTAGGGTTCTACTTAACCCCCCCTTCTCTTTCAGATCTGTAACCACTTCTTTACCTCCCTTACTCTGGCGTTGGTTTTCCCACGCCCCCACTTGCTTCTTTTGAGATCCTCATCTCTGTTCGCCATTTTTTCTTTACGTGTTTGTCGATTTCTCACTCTTATCGAGTTGACCTTGGAGGAATGTCGATTTTACCCAAAGGTGATTCGATTCAAATCCGGGAAGTCTGGAATGCTAATTTGGAAGAGGAGTTTGCGTTAATCCGTGCGATTGTTGATAAATTTAATTACATAGCTATGGATACTGAGTTCCCTGGTGTTGTACTTCGTCCTTTGGGTACTTTCAAGAATATCAATGATTTCAACTACCGGACTCTTAAGGATAATGTTGAGATGTTGAAGTTGATTCAGTTGGGTCTTACTTTCTCTGATGAGGATGGGAATCTCCCAACTTGTGGAACTGATAAGTTTTGCATTTGGCAGTTCAATTTCCGTGAGTTCAATATTGGTAGTGATATTTTTGCTAGTGATTCCATTGAGCTTCTTCGTCAGTGTGGTATTGATTTTCAGAAGAACAATGAAGAGGGTATCGATGTTAATCGTTTTGGTGAGCTTCTTATGTCTTCTGGGGTTGTGTTAAACGATGATGTGAACTGGGTCACGTTTCACAGTGGGTATGATTTTGGTTACTTGCTGAAATTGCTCACTTGCCGTGGCTTACCCAATGACCAGGCGGGTTTCTTTGAGTTGATCAATGTCTATTTTCCAGTGGTCTATGATATCAAGCATTTGATGAAGTTTTGCAACAGTCTCCATGGTGGGTTGAACAAGCTTGCTGAATTATTAGAAGTTGAGAGGATTGGAGTTTGTCATCAAGCAGGATCAGATAGTCTGCTTACTGCCTGTACTTTTAGGAAGTTAAGGGATACCTTTTTCAATGGATCTATACAGAAATACGCAGGTGTTTTGTATGGCCTTGGTGTTGAAAATGGACAGCGTACTAATTGAAGAGAATTACAAAGTGTTTGTAGAAGTGTGAGACATTTAGTTACTTCTGTACAATTTGGCTAAAGCATTGATGATGATTGTAACTGTTTTCAGCTTTCCTGCTCTGTAATAGAAACCTACGACTGTTTTTTGCAGCTTAGTGGTTTCTTGTAAATTATGTCAGTTAGTGTTTCAATAAGAATTTTATTGACGTTTTTTAGAATGAGTTTCCACTTCTTTTGTGAACTTTTTATTACTAATTCCTTTGGGTTCGTTAATCATGTAAGGCCCCAAAGGTATTTGAAATGATACACAATGTTGCCAATAGAACATATTTCTTTAACAACCGGTTATGTGAATTCTCAGGTCTTTCATTTGTTTTCTCCTCTCCTAATGATGTGACTATGTAGCTTTGTTGTCATCGATGCCATTAAGATAGACACTGACAATAGTTGGATTGGATTGGAATCTGATAAAAACCATCAGCCTGTCTCAATTCTTATAGTTAAATTGGTTTTCTGTCATATTGGACACTTTTTGTTCTCAGTAGTTGTTTGTATCTGATGGTTCTGCAAGGCCCTCTGTATACTTCAATTGCTATGTGTTTGGTTGTTTTGTAGTTAATCGCTTGTTTTCTTCCATTTCCTATAGAGTATTTGCATACTTTGTTAGTACGGATGTTTCTGAGGTATCCCTGTAGCTAATATTTCATTTGCTGGTCTGATTGTAGAGTTTAGAGGTGAAACTGCTCTTCACCGGGTCTTGTCTTACAACATGATCTAAACTTGGTTACATTTTGTTTTCTTATTTTAGTACTGCACAAAATTTTGAAAATCGGAATGGAATGGAAGGAGCCATGGAGATCTACGGCCCCTGTTAATCTTTCATCAGGTAGGCCAAATTTCCTTTTCCTTGATTCAGTTTAGAGAGTTGGTTGATCTGCAGCTTTTACTACCAACAGGGCTGACCCATGTTATGAATGCAAAACAAGATCCAATCGTCTGCACATCGGGTGAGTATTGTATACTCTTTAGTTTAAAATTCTCACTTTGTAGCCACATCTGATGAGATTCAGTGCATTTGCCACAATTTTGAAGAGATATGCATCTTATTAAAGTAAAGTTGCATACTAGCTTCAGCTGTCAAATCTCAATCATATTAAACTTTCGACTTTTAACCGATTGCCCTGACCGTTTGATCTGGTGGCAATGGAACCACTAGAAATTTCTGCCACAGTGATCTTAGAACTCTTAGGTCTGATCATAAATACATATAAACACTTTCACACTTGTTCTGTCTTTTGGTATTTGTAGACATGACCAAGCTGGTAACCAAGGAGGAAGAGGGTTGAGAATTTGGAATTGGAGAAGGTATTTGACAGCAGCCAAACTTGAAGATCCATTGTTTAATCTCATATTACCTACCATCATGAGCTGGAATGGAGTTTTTCACCCCCCAAGAGATAAGGATTTGGATCTGATCTGGTATGATTTTGGTTATTGTTGTTGGATCCACATTTTATGGTCATATTATTATATGACATTGGGTGACTTCCTATTCTGAAAAATAATTGTACCTAATCTTTTGTTTGAGAGAGAAAGGGAAATGGGTTGCACATGCATATGACTATGATCATATGTGCACATAATAGACTTAAGAAAGCCATTGAGATGGGAGTCTTCCTCTTCCTCTAATGCTTTCACAGCTGAAATCAGCAAATTATATTCACTTTGTATCCAAGAATTCTCTCTTGGATTGGCATGCTCGTGCAGCTCAATAATGCATGCTTCATTTAATTATCTATTTAAGGGAAGGAATAGTAACAATTGAGCTATGTTGGTGTTGATTTAGAAA

mRNA sequence

GCAAGATGAGGGGAAACGGCGTCGTATAAGTAGTGGATGTGGATCCACATTGAAACGACGCCGGATTTGAAAGTGTAAACATCACTTTCCCCGTCGTCTACCAGGGAGGGCGTAGAGCAACGTTTTAGGGAGAGGGTGAGCATTAGGCAAACTCTCTCTCTCTCTATCTCTCCTCTCTCTCTATCAAACCCTGTTTTTCTCTCCCGCTGCTCCTCCTCCTCCTCCTCCGCCGTTGACCTCCTTCTCCTCCATTTCTACAACTCCCTTCTTCTAGATCTACCCTTCCCACCTTTCAATTTCACATTTTCAAGGTCAGATCTACTTACCCCTTTTTACATCACTTTATTTCTAGGGTTCTACTTAACCCCCCCTTCTCTTTCAGATCTGTAACCACTTCTTTACCTCCCTTACTCTGGCGTTGGTTTTCCCACGCCCCCACTTGCTTCTTTTGAGATCCTCATCTCTGTTCGCCATTTTTTCTTTACGTGTTTGTCGATTTCTCACTCTTATCGAGTTGACCTTGGAGGAATGTCGATTTTACCCAAAGGTGATTCGATTCAAATCCGGGAAGTCTGGAATGCTAATTTGGAAGAGGAGTTTGCGTTAATCCGTGCGATTGTTGATAAATTTAATTACATAGCTATGGATACTGAGTTCCCTGGTGTTGTACTTCGTCCTTTGGGTACTTTCAAGAATATCAATGATTTCAACTACCGGACTCTTAAGGATAATGTTGAGATGTTGAAGTTGATTCAGTTGGGTCTTACTTTCTCTGATGAGGATGGGAATCTCCCAACTTGTGGAACTGATAAGTTTTGCATTTGGCAGTTCAATTTCCGTGAGTTCAATATTGGTAGTGATATTTTTGCTAGTGATTCCATTGAGCTTCTTCGTCAGTGTGGTATTGATTTTCAGAAGAACAATGAAGAGGGTATCGATGTTAATCGTTTTGGTGAGCTTCTTATGTCTTCTGGGGTTGTGTTAAACGATGATGTGAACTGGGTCACGTTTCACAGTGGGTATGATTTTGGTTACTTGCTGAAATTGCTCACTTGCCGTGGCTTACCCAATGACCAGGCGGGTTTCTTTGAGTTGATCAATGTCTATTTTCCAGTGGTCTATGATATCAAGCATTTGATGAAGTTTTGCAACAGTCTCCATGGTGGGTTGAACAAGCTTGCTGAATTATTAGAAGTTGAGAGGATTGGAGTTTGTCATCAAGCAGGATCAGATAGTCTGCTTACTGCCTGTACTTTTAGGAAGTTAAGGGATACCTTTTTCAATGGATCTATACAGAAATACGCAGGTGTTTTGTATGGCCTTGGTGTTGAAAATGGACAGCGTACTAATTGAAGAGAATTACAAAGTGTTTGTAGAAGTGTGAGACATTTAGTTACTTCTGTACAATTTGGCTAAAGCATTGATGATGATTGTAACTGTTTTCAGCTTTCCTGCTCTGTAATAGAAACCTACGACTGTTTTTTGCAGCTTAGTGGTTTCTTGTAAATTATGTCAGTTAGTGTTTCAATAAGAATTTTATTGACGTTTTTTAGAATGAGTTTCCACTTCTTTTGTGAACTTTTTATTACTAATTCCTTTGGGTTCGTTAATCATGTAAGGCCCCAAAGGTATTTGAAATGATACACAATGTTGCCAATAGAACATATTTCTTTAACAACCGGTTATGTGAATTCTCAGGTCTTTCATTTGTTTTCTCCTCTCCTAATGATGTGACTATGTAGCTTTGTTGTCATCGATGCCATTAAGATAGACACTGACAATAGTTGGATTGGATTGGAATCTGATAAAAACCATCAGCCTGTCTCAATTCTTATAGTTAAATTGGTTTTCTGTCATATTGGACACTTTTTGTTCTCAGTAGTTGTTTGTATCTGATGGTTCTGCAAGGCCCTCTGTATACTTCAATTGCTATGTGTTTGGTTGTTTTGTAGTTAATCGCTTGTTTTCTTCCATTTCCTATAGAGTATTTGCATACTTTGTTAGTACGGATGTTTCTGAGTACTGCACAAAATTTTGAAAATCGGAATGGAATGGAAGGAGCCATGGAGATCTACGGCCCCTGTTAATCTTTCATCAGGGCTGACCCATGTTATGAATGCAAAACAAGATCCAATCGTCTGCACATCGGACATGACCAAGCTGGTAACCAAGGAGGAAGAGGGTTGAGAATTTGGAATTGGAGAAGGTATTTGACAGCAGCCAAACTTGAAGATCCATTGTTTAATCTCATATTACCTACCATCATGAGCTGGAATGGAGTTTTTCACCCCCCAAGAGATAAGGATTTGGATCTGATCTGGTATGATTTTGGTTATTGTTGTTGGATCCACATTTTATGGTCATATTATTATATGACATTGGGTGACTTCCTATTCTGAAAAATAATTGTACCTAATCTTTTGTTTGAGAGAGAAAGGGAAATGGGTTGCACATGCATATGACTATGATCATATGTGCACATAATAGACTTAAGAAAGCCATTGAGATGGGAGTCTTCCTCTTCCTCTAATGCTTTCACAGCTGAAATCAGCAAATTATATTCACTTTGTATCCAAGAATTCTCTCTTGGATTGGCATGCTCGTGCAGCTCAATAATGCATGCTTCATTTAATTATCTATTTAAGGGAAGGAATAGTAACAATTGAGCTATGTTGGTGTTGATTTAGAAA

Coding sequence (CDS)

ATGTCGATTTTACCCAAAGGTGATTCGATTCAAATCCGGGAAGTCTGGAATGCTAATTTGGAAGAGGAGTTTGCGTTAATCCGTGCGATTGTTGATAAATTTAATTACATAGCTATGGATACTGAGTTCCCTGGTGTTGTACTTCGTCCTTTGGGTACTTTCAAGAATATCAATGATTTCAACTACCGGACTCTTAAGGATAATGTTGAGATGTTGAAGTTGATTCAGTTGGGTCTTACTTTCTCTGATGAGGATGGGAATCTCCCAACTTGTGGAACTGATAAGTTTTGCATTTGGCAGTTCAATTTCCGTGAGTTCAATATTGGTAGTGATATTTTTGCTAGTGATTCCATTGAGCTTCTTCGTCAGTGTGGTATTGATTTTCAGAAGAACAATGAAGAGGGTATCGATGTTAATCGTTTTGGTGAGCTTCTTATGTCTTCTGGGGTTGTGTTAAACGATGATGTGAACTGGGTCACGTTTCACAGTGGGTATGATTTTGGTTACTTGCTGAAATTGCTCACTTGCCGTGGCTTACCCAATGACCAGGCGGGTTTCTTTGAGTTGATCAATGTCTATTTTCCAGTGGTCTATGATATCAAGCATTTGATGAAGTTTTGCAACAGTCTCCATGGTGGGTTGAACAAGCTTGCTGAATTATTAGAAGTTGAGAGGATTGGAGTTTGTCATCAAGCAGGATCAGATAGTCTGCTTACTGCCTGTACTTTTAGGAAGTTAAGGGATACCTTTTTCAATGGATCTATACAGAAATACGCAGGTGTTTTGTATGGCCTTGGTGTTGAAAATGGACAGCGTACTAATTGA

Protein sequence

MSILPKGDSIQIREVWNANLEEEFALIRAIVDKFNYIAMDTEFPGVVLRPLGTFKNINDFNYRTLKDNVEMLKLIQLGLTFSDEDGNLPTCGTDKFCIWQFNFREFNIGSDIFASDSIELLRQCGIDFQKNNEEGIDVNRFGELLMSSGVVLNDDVNWVTFHSGYDFGYLLKLLTCRGLPNDQAGFFELINVYFPVVYDIKHLMKFCNSLHGGLNKLAELLEVERIGVCHQAGSDSLLTACTFRKLRDTFFNGSIQKYAGVLYGLGVENGQRTN

Homology

[Close]

BLAST of PI0010175.1 vs. ExPASy Swiss-Prot
Match: Q9SKZ2 (Probable CCR4-associated factor 1 homolog 7 OS=Arabidopsis thaliana OX=3702 GN=CAF1-7 PE=2 SV=2)

HSP 1 Score: 449.5 bits (1155), Expect = 2.7e-125
Identity = 208/272 (76.47%), Postives = 240/272 (88.24%), Query Frame = 0


Query: 1   MSILPKGDSIQIREVWNANLEEEFALIRAIVDKFNYIAMDTEFPGVVLRPLGTFKNINDF 60
           MS+  K DSIQIREVWN NLE E ALIR +VD F ++AMDTEFPG+V RP+GTFK   ++
Sbjct: 1   MSLFLKDDSIQIREVWNDNLESEMALIREVVDDFPFVAMDTEFPGIVCRPVGTFKTNTEY 60

Query: 61  NYRTLKDNVEMLKLIQLGLTFSDEDGNLPTCGTD-KFCIWQFNFREFNIGSDIFASDSIE 120
           +Y TLK NV +LK+IQLGLTFSDE GNLPTCGTD K+CIWQFNFREF++ SDI+A+DSIE
Sbjct: 61  HYETLKTNVNILKMIQLGLTFSDEKGNLPTCGTDNKYCIWQFNFREFDLESDIYATDSIE 120

Query: 121 LLRQCGIDFQKNNEEGIDVNRFGELLMSSGVVLNDDVNWVTFHSGYDFGYLLKLLTCRGL 180
           LLRQ GIDF KNNE GID  RF ELLMSSG+VLN++V+WVTFHSGYDFGYLLKLLTC+ L
Sbjct: 121 LLRQSGIDFVKNNEFGIDSKRFAELLMSSGIVLNENVHWVTFHSGYDFGYLLKLLTCQNL 180

Query: 181 PNDQAGFFELINVYFPVVYDIKHLMKFCNSLHGGLNKLAELLEVERIGVCHQAGSDSLLT 240
           P  Q GFFE+I+VYFP VYDIKHLMKFCNSLHGGLNKLAELL+VER+G+CHQAGSDSLLT
Sbjct: 181 PETQTGFFEMISVYFPRVYDIKHLMKFCNSLHGGLNKLAELLDVERVGICHQAGSDSLLT 240

Query: 241 ACTFRKLRDTFFNGSIQKYAGVLYGLGVENGQ 272
           +CTFRKL++ FF GS++KY+GVLYGLGVENGQ
Sbjct: 241 SCTFRKLQENFFIGSMEKYSGVLYGLGVENGQ 272

[Close]

BLAST of PI0010175.1 vs. ExPASy Swiss-Prot
Match: Q9SAI2 (Probable CCR4-associated factor 1 homolog 6 OS=Arabidopsis thaliana OX=3702 GN=CAF1-6 PE=1 SV=1)

HSP 1 Score: 447.6 bits (1150), Expect = 1.0e-124
Identity = 205/271 (75.65%), Postives = 237/271 (87.45%), Query Frame = 0


Query: 1   MSILPKGDSIQIREVWNANLEEEFALIRAIVDKFNYIAMDTEFPGVVLRPLGTFKNINDF 60
           MS+  K DSIQIREVWN NL+EE  LIR +VD F Y+AMDTEFPG+V+RP+GTFK+  D+
Sbjct: 1   MSLFLKDDSIQIREVWNDNLQEEMDLIRDVVDDFPYVAMDTEFPGIVVRPVGTFKSNADY 60

Query: 61  NYRTLKDNVEMLKLIQLGLTFSDEDGNLPTCGTDKFCIWQFNFREFNIGSDIFASDSIEL 120
           +Y TLK NV +LK+IQLGLTFS+E GNLPTCGTDK+CIWQFNFREF++ SDIFA DSIEL
Sbjct: 61  HYETLKTNVNILKMIQLGLTFSNEQGNLPTCGTDKYCIWQFNFREFDLDSDIFALDSIEL 120

Query: 121 LRQCGIDFQKNNEEGIDVNRFGELLMSSGVVLNDDVNWVTFHSGYDFGYLLKLLTCRGLP 180
           L+Q GID  KN  +GID  RF ELLMSSG+VLN++V+WVTFHSGYDFGYLLKLLTC+ LP
Sbjct: 121 LKQSGIDLAKNTLDGIDSKRFAELLMSSGIVLNENVHWVTFHSGYDFGYLLKLLTCQNLP 180

Query: 181 NDQAGFFELINVYFPVVYDIKHLMKFCNSLHGGLNKLAELLEVERIGVCHQAGSDSLLTA 240
           + Q  FF+LINVYFP VYDIKHLMKFCNSLHGGLNKLAELLEVER+G+CHQAGSDSLLT+
Sbjct: 181 DSQTDFFKLINVYFPTVYDIKHLMKFCNSLHGGLNKLAELLEVERVGICHQAGSDSLLTS 240

Query: 241 CTFRKLRDTFFNGSIQKYAGVLYGLGVENGQ 272
           CTFRKL++ FF G + KY+GVLYGLGVENGQ
Sbjct: 241 CTFRKLKENFFVGPLHKYSGVLYGLGVENGQ 271

[Close]

BLAST of PI0010175.1 vs. ExPASy Swiss-Prot
Match: Q9LEU4 (Probable CCR4-associated factor 1 homolog 10 OS=Arabidopsis thaliana OX=3702 GN=CAF1-10 PE=2 SV=1)

HSP 1 Score: 442.6 bits (1137), Expect = 3.3e-123
Identity = 205/268 (76.49%), Postives = 236/268 (88.06%), Query Frame = 0


Query: 6   KGDSIQIREVWNANLEEEFALIRAIVDKFNYIAMDTEFPGVVLRPLGTFKNINDFNYRTL 65
           K DSI IREVW+ NL EEFALIR IVDKF+YIAMDTEFPGVVL+P+ TFK  ND NYRTL
Sbjct: 6   KEDSIMIREVWDYNLVEEFALIREIVDKFSYIAMDTEFPGVVLKPVATFKYNNDLNYRTL 65

Query: 66  KDNVEMLKLIQLGLTFSDEDGNLPTCGTDKFCIWQFNFREFNIGSDIFASDSIELLRQCG 125
           K+NV++LKLIQ+GLTFSDE+GNLPTCGTDKFCIWQFNFREFNIG DI+AS+SIELLRQCG
Sbjct: 66  KENVDLLKLIQVGLTFSDENGNLPTCGTDKFCIWQFNFREFNIGEDIYASESIELLRQCG 125

Query: 126 IDFQKNNEEGIDVNRFGELLMSSGVVLNDDVNWVTFHSGYDFGYLLKLLTCRGLPNDQAG 185
           IDF+KN E+GIDV RFGEL+MSSG+VLND ++WVTFH GYDFGYL+KLLTC+ LP  QA 
Sbjct: 126 IDFKKNIEKGIDVVRFGELMMSSGIVLNDAISWVTFHGGYDFGYLVKLLTCKELPLKQAD 185

Query: 186 FFELINVYFPVVYDIKHLMKFCNSLHGGLNKLAELLEVERIGVCHQAGSDSLLTACTFRK 245
           FF+L+ VYFP VYDIKHLM FCN L GGLN+LAEL+ VER+G+CHQAGSDSLLT  +FRK
Sbjct: 186 FFKLLYVYFPTVYDIKHLMTFCNGLFGGLNRLAELMGVERVGICHQAGSDSLLTLGSFRK 245

Query: 246 LRDTFFNGSIQKYAGVLYGLGVENGQRT 274
           L++ +F GS +KY GVLYGLGVE+G  T
Sbjct: 246 LKERYFPGSTEKYTGVLYGLGVEDGTTT 273

[Close]

BLAST of PI0010175.1 vs. ExPASy Swiss-Prot
Match: Q9S9P2 (Probable CCR4-associated factor 1 homolog 2 OS=Arabidopsis thaliana OX=3702 GN=CAF1-2 PE=1 SV=1)

HSP 1 Score: 354.8 bits (909), Expect = 9.0e-97
Identity = 168/264 (63.64%), Postives = 206/264 (78.03%), Query Frame = 0


Query: 8   DSIQIREVWNANLEEEFALIRAIVDKFNYIAMDTEFPGVVLRPLGTFKNIN------DFN 67
           D+I+IREVWN NLE+E ALI   +D F Y+AMDTEFPG+V + +    N N      ++N
Sbjct: 12  DTIEIREVWNHNLEQEMALIEQSIDDFPYVAMDTEFPGIVCKTVTANPNPNPYSIHYEYN 71

Query: 68  YRTLKDNVEMLKLIQLGLTFSDEDGNLPTCGTDKFCIWQFNFREFNIGSDIFASDSIELL 127
           Y TLK NV MLKLIQLGLT SDE GNLPTCGT+K CIWQFNFREFN+ SD+FA DSIELL
Sbjct: 72  YDTLKANVNMLKLIQLGLTLSDEKGNLPTCGTNKQCIWQFNFREFNVISDMFALDSIELL 131

Query: 128 RQCGIDFQKNNEEGIDVNRFGELLMSSGVVLNDDVNWVTFHSGYDFGYLLKLLTCRGLPN 187
           R+  ID +KNNE G+D  RF ELLM SGVVLND ++WVTFH GYDFGYLLKLL+ + LP 
Sbjct: 132 RKSAIDLEKNNECGVDAKRFAELLMGSGVVLNDKIHWVTFHCGYDFGYLLKLLSGKELPE 191

Query: 188 DQAGFFELINVYFPVVYDIKHLMKFCNSLHGGLNKLAELLEVERIGVCHQAGSDSLLTAC 247
           + + FF+ +  +FPVVYDIK+LM FC +L+GGL K+AELL V+R+G+ HQAGSDSLLT  
Sbjct: 192 EISDFFDQMEKFFPVVYDIKYLMGFCTNLYGGLEKIAELLGVKRVGISHQAGSDSLLTLR 251

Query: 248 TFRKLRDTFFNGSIQKYAGVLYGL 266
           TF K+++ FF GS+ KY+G L+GL
Sbjct: 252 TFIKMKEFFFTGSLLKYSGFLFGL 275

[Close]

BLAST of PI0010175.1 vs. ExPASy Swiss-Prot
Match: Q3ZC01 (CCR4-NOT transcription complex subunit 7 OS=Bos taurus OX=9913 GN=CNOT7 PE=2 SV=1)

HSP 1 Score: 301.6 bits (771), Expect = 9.1e-81
Identity = 149/269 (55.39%), Postives = 194/269 (72.12%), Query Frame = 0


Query: 9   SIQIREVWNANLEEEFALIRAIVDKFNYIAMDTEFPGVVLRPLGTFKNINDFNYRTLKDN 68
           S +I EVW  NL+EE   IR ++ K+NY+AMDTEFPGVV RP+G F++  D+ Y+ L+ N
Sbjct: 9   SQRICEVWACNLDEEMKKIRQVIRKYNYVAMDTEFPGVVARPIGEFRSNADYQYQLLRCN 68

Query: 69  VEMLKLIQLGLTFSDEDGNLPTCGTDKFCIWQFNFREFNIGSDIFASDSIELLRQCGIDF 128
           V++LK+IQLGLTF +E G  P  GT     WQFNF+ FN+  D++A DSIELL   GI F
Sbjct: 69  VDLLKIIQLGLTFMNEQGEYPP-GTS---TWQFNFK-FNLTEDMYAQDSIELLTTSGIQF 128

Query: 129 QKNNEEGIDVNRFGELLMSSGVVLNDDVNWVTFHSGYDFGYLLKLLTCRGLPNDQAGFFE 188
           +K+ EEGI+   F ELLM+SGVVL + V W++FHSGYDFGYL+K+LT   LP ++  FFE
Sbjct: 129 KKHEEEGIETQYFAELLMTSGVVLCEGVKWLSFHSGYDFGYLIKILTNSNLPEEELDFFE 188

Query: 189 LINVYFPVVYDIKHLMKFCNSLHGGLNKLAELLEVERIGVCHQAGSDSLLTACTFRKLRD 248
           ++ ++FPV+YD+K+LMK C +L GGL ++AE LE+ERIG  HQAGSDSLLT   F K+R+
Sbjct: 189 ILRLFFPVIYDVKYLMKSCKNLKGGLQEVAEQLELERIGPQHQAGSDSLLTGMAFFKMRE 248

Query: 249 TFFNGSIQ--KYAGVLYGLG-----VENG 271
            FF   I   KY G LYGLG     V+NG
Sbjct: 249 MFFEDHIDDAKYCGHLYGLGSGSSYVQNG 272

[Close]

BLAST of PI0010175.1 vs. ExPASy TrEMBL
Match: A0A5A7V9Q6 (Poly(A)-specific ribonuclease OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold82G002070 PE=3 SV=1)

HSP 1 Score: 574.7 bits (1480), Expect = 2.0e-160
Identity = 274/274 (100.00%), Postives = 274/274 (100.00%), Query Frame = 0


Query: 1   MSILPKGDSIQIREVWNANLEEEFALIRAIVDKFNYIAMDTEFPGVVLRPLGTFKNINDF 60
           MSILPKGDSIQIREVWNANLEEEFALIRAIVDKFNYIAMDTEFPGVVLRPLGTFKNINDF
Sbjct: 61  MSILPKGDSIQIREVWNANLEEEFALIRAIVDKFNYIAMDTEFPGVVLRPLGTFKNINDF 120

Query: 61  NYRTLKDNVEMLKLIQLGLTFSDEDGNLPTCGTDKFCIWQFNFREFNIGSDIFASDSIEL 120
           NYRTLKDNVEMLKLIQLGLTFSDEDGNLPTCGTDKFCIWQFNFREFNIGSDIFASDSIEL
Sbjct: 121 NYRTLKDNVEMLKLIQLGLTFSDEDGNLPTCGTDKFCIWQFNFREFNIGSDIFASDSIEL 180

Query: 121 LRQCGIDFQKNNEEGIDVNRFGELLMSSGVVLNDDVNWVTFHSGYDFGYLLKLLTCRGLP 180
           LRQCGIDFQKNNEEGIDVNRFGELLMSSGVVLNDDVNWVTFHSGYDFGYLLKLLTCRGLP
Sbjct: 181 LRQCGIDFQKNNEEGIDVNRFGELLMSSGVVLNDDVNWVTFHSGYDFGYLLKLLTCRGLP 240

Query: 181 NDQAGFFELINVYFPVVYDIKHLMKFCNSLHGGLNKLAELLEVERIGVCHQAGSDSLLTA 240
           NDQAGFFELINVYFPVVYDIKHLMKFCNSLHGGLNKLAELLEVERIGVCHQAGSDSLLTA
Sbjct: 241 NDQAGFFELINVYFPVVYDIKHLMKFCNSLHGGLNKLAELLEVERIGVCHQAGSDSLLTA 300

Query: 241 CTFRKLRDTFFNGSIQKYAGVLYGLGVENGQRTN 275
           CTFRKLRDTFFNGSIQKYAGVLYGLGVENGQRTN
Sbjct: 301 CTFRKLRDTFFNGSIQKYAGVLYGLGVENGQRTN 334

[Close]

BLAST of PI0010175.1 vs. ExPASy TrEMBL
Match: A0A1S3BD45 (Poly(A)-specific ribonuclease OS=Cucumis melo OX=3656 GN=LOC103488344 PE=3 SV=1)

HSP 1 Score: 574.7 bits (1480), Expect = 2.0e-160
Identity = 274/274 (100.00%), Postives = 274/274 (100.00%), Query Frame = 0


Query: 1   MSILPKGDSIQIREVWNANLEEEFALIRAIVDKFNYIAMDTEFPGVVLRPLGTFKNINDF 60
           MSILPKGDSIQIREVWNANLEEEFALIRAIVDKFNYIAMDTEFPGVVLRPLGTFKNINDF
Sbjct: 1   MSILPKGDSIQIREVWNANLEEEFALIRAIVDKFNYIAMDTEFPGVVLRPLGTFKNINDF 60

Query: 61  NYRTLKDNVEMLKLIQLGLTFSDEDGNLPTCGTDKFCIWQFNFREFNIGSDIFASDSIEL 120
           NYRTLKDNVEMLKLIQLGLTFSDEDGNLPTCGTDKFCIWQFNFREFNIGSDIFASDSIEL
Sbjct: 61  NYRTLKDNVEMLKLIQLGLTFSDEDGNLPTCGTDKFCIWQFNFREFNIGSDIFASDSIEL 120

Query: 121 LRQCGIDFQKNNEEGIDVNRFGELLMSSGVVLNDDVNWVTFHSGYDFGYLLKLLTCRGLP 180
           LRQCGIDFQKNNEEGIDVNRFGELLMSSGVVLNDDVNWVTFHSGYDFGYLLKLLTCRGLP
Sbjct: 121 LRQCGIDFQKNNEEGIDVNRFGELLMSSGVVLNDDVNWVTFHSGYDFGYLLKLLTCRGLP 180

Query: 181 NDQAGFFELINVYFPVVYDIKHLMKFCNSLHGGLNKLAELLEVERIGVCHQAGSDSLLTA 240
           NDQAGFFELINVYFPVVYDIKHLMKFCNSLHGGLNKLAELLEVERIGVCHQAGSDSLLTA
Sbjct: 181 NDQAGFFELINVYFPVVYDIKHLMKFCNSLHGGLNKLAELLEVERIGVCHQAGSDSLLTA 240

Query: 241 CTFRKLRDTFFNGSIQKYAGVLYGLGVENGQRTN 275
           CTFRKLRDTFFNGSIQKYAGVLYGLGVENGQRTN
Sbjct: 241 CTFRKLRDTFFNGSIQKYAGVLYGLGVENGQRTN 274

[Close]

BLAST of PI0010175.1 vs. ExPASy TrEMBL
Match: A0A0A0LMH2 (Poly(A)-specific ribonuclease OS=Cucumis sativus OX=3659 GN=Csa_2G382610 PE=3 SV=1)

HSP 1 Score: 573.5 bits (1477), Expect = 4.6e-160
Identity = 273/274 (99.64%), Postives = 274/274 (100.00%), Query Frame = 0


Query: 1   MSILPKGDSIQIREVWNANLEEEFALIRAIVDKFNYIAMDTEFPGVVLRPLGTFKNINDF 60
           MSILPKGDSIQIREVWNANLEEEFALIRAIVDKFNYIAMDTEFPGVVLRPLGTFKNINDF
Sbjct: 1   MSILPKGDSIQIREVWNANLEEEFALIRAIVDKFNYIAMDTEFPGVVLRPLGTFKNINDF 60

Query: 61  NYRTLKDNVEMLKLIQLGLTFSDEDGNLPTCGTDKFCIWQFNFREFNIGSDIFASDSIEL 120
           NYRTLKDNVEMLKLIQLGLTFSDEDGNLPTCGTDKFCIWQFNFREFNIGSDIFASDSIEL
Sbjct: 61  NYRTLKDNVEMLKLIQLGLTFSDEDGNLPTCGTDKFCIWQFNFREFNIGSDIFASDSIEL 120

Query: 121 LRQCGIDFQKNNEEGIDVNRFGELLMSSGVVLNDDVNWVTFHSGYDFGYLLKLLTCRGLP 180
           LRQCGIDFQKNNEEGIDVNRFGELLMSSGVVLNDDVNWVTFHSGYDFGYLLKLLTCRGLP
Sbjct: 121 LRQCGIDFQKNNEEGIDVNRFGELLMSSGVVLNDDVNWVTFHSGYDFGYLLKLLTCRGLP 180

Query: 181 NDQAGFFELINVYFPVVYDIKHLMKFCNSLHGGLNKLAELLEVERIGVCHQAGSDSLLTA 240
           NDQAGFFELINVYFPV+YDIKHLMKFCNSLHGGLNKLAELLEVERIGVCHQAGSDSLLTA
Sbjct: 181 NDQAGFFELINVYFPVLYDIKHLMKFCNSLHGGLNKLAELLEVERIGVCHQAGSDSLLTA 240

Query: 241 CTFRKLRDTFFNGSIQKYAGVLYGLGVENGQRTN 275
           CTFRKLRDTFFNGSIQKYAGVLYGLGVENGQRTN
Sbjct: 241 CTFRKLRDTFFNGSIQKYAGVLYGLGVENGQRTN 274

[Close]

BLAST of PI0010175.1 vs. ExPASy TrEMBL
Match: A0A6J1KC39 (Poly(A)-specific ribonuclease OS=Cucurbita maxima OX=3661 GN=LOC111491945 PE=3 SV=1)

HSP 1 Score: 542.0 bits (1395), Expect = 1.5e-150
Identity = 258/274 (94.16%), Postives = 264/274 (96.35%), Query Frame = 0


Query: 1   MSILPKGDSIQIREVWNANLEEEFALIRAIVDKFNYIAMDTEFPGVVLRPLGTFKNINDF 60
           MSILPKGDSIQIREVWN NLEEEFALIR IVDKFNYIAMDTEFPGVVLRPLG FKNIND+
Sbjct: 1   MSILPKGDSIQIREVWNDNLEEEFALIREIVDKFNYIAMDTEFPGVVLRPLGAFKNINDY 60

Query: 61  NYRTLKDNVEMLKLIQLGLTFSDEDGNLPTCGTDKFCIWQFNFREFNIGSDIFASDSIEL 120
           NY+TLKDNV+MLKLIQLGLTFSDE+GN PTCGTD FCIWQFNFREFNIGSDIFASDSIEL
Sbjct: 61  NYQTLKDNVDMLKLIQLGLTFSDENGNFPTCGTDNFCIWQFNFREFNIGSDIFASDSIEL 120

Query: 121 LRQCGIDFQKNNEEGIDVNRFGELLMSSGVVLNDDVNWVTFHSGYDFGYLLKLLTCRGLP 180
           LRQCGIDFQKNNEEGIDVNRFGELLMSSGVVLN DVNWVTFHSGYDFGYLLKLLTCRGLP
Sbjct: 121 LRQCGIDFQKNNEEGIDVNRFGELLMSSGVVLNADVNWVTFHSGYDFGYLLKLLTCRGLP 180

Query: 181 NDQAGFFELINVYFPVVYDIKHLMKFCNSLHGGLNKLAELLEVERIGVCHQAGSDSLLTA 240
             Q GFF+LINVYFPVVYDIKHLMKFCNSLHGGLNKLAELLEVERIGVCHQAGSDSLLTA
Sbjct: 181 EKQDGFFDLINVYFPVVYDIKHLMKFCNSLHGGLNKLAELLEVERIGVCHQAGSDSLLTA 240

Query: 241 CTFRKLRDTFFNGSIQKYAGVLYGLGVENGQRTN 275
            TFRKLR+TFFNGSIQKYAGVLYGLGVENGQRTN
Sbjct: 241 STFRKLRNTFFNGSIQKYAGVLYGLGVENGQRTN 274

[Close]

BLAST of PI0010175.1 vs. ExPASy TrEMBL
Match: A0A6J1HCG0 (Poly(A)-specific ribonuclease OS=Cucurbita moschata OX=3662 GN=LOC111462726 PE=3 SV=1)

HSP 1 Score: 540.0 bits (1390), Expect = 5.6e-150
Identity = 258/274 (94.16%), Postives = 264/274 (96.35%), Query Frame = 0


Query: 1   MSILPKGDSIQIREVWNANLEEEFALIRAIVDKFNYIAMDTEFPGVVLRPLGTFKNINDF 60
           MSILPKGDSIQIREVWN NLEEEFALIR IVDKFNYIAMDTEFPGVVLRPLG FKNIND+
Sbjct: 1   MSILPKGDSIQIREVWNDNLEEEFALIREIVDKFNYIAMDTEFPGVVLRPLGAFKNINDY 60

Query: 61  NYRTLKDNVEMLKLIQLGLTFSDEDGNLPTCGTDKFCIWQFNFREFNIGSDIFASDSIEL 120
           NY+TLKDNV+MLKLIQLGLTFSDE+GNLPTCGTD FCIWQFNFREFNI SDIFASDSIEL
Sbjct: 61  NYQTLKDNVDMLKLIQLGLTFSDENGNLPTCGTDSFCIWQFNFREFNIVSDIFASDSIEL 120

Query: 121 LRQCGIDFQKNNEEGIDVNRFGELLMSSGVVLNDDVNWVTFHSGYDFGYLLKLLTCRGLP 180
           LRQCGIDFQKNNEEGIDVNRFGELLMSSGVVLN DVNWVTFHSGYDFGYLLKLLTCRGLP
Sbjct: 121 LRQCGIDFQKNNEEGIDVNRFGELLMSSGVVLNADVNWVTFHSGYDFGYLLKLLTCRGLP 180

Query: 181 NDQAGFFELINVYFPVVYDIKHLMKFCNSLHGGLNKLAELLEVERIGVCHQAGSDSLLTA 240
             Q GFF+LINVYFPVVYDIKHLMKFCNSLHGGLNKLAELLEVERIGVCHQAGSDSLLTA
Sbjct: 181 EKQDGFFDLINVYFPVVYDIKHLMKFCNSLHGGLNKLAELLEVERIGVCHQAGSDSLLTA 240

Query: 241 CTFRKLRDTFFNGSIQKYAGVLYGLGVENGQRTN 275
            TFRKLR+TFFNGSIQKYAGVLYGLGVENGQRTN
Sbjct: 241 STFRKLRNTFFNGSIQKYAGVLYGLGVENGQRTN 274

[Close]

BLAST of PI0010175.1 vs. NCBI nr
Match: XP_008445259.1 (PREDICTED: probable CCR4-associated factor 1 homolog 7 [Cucumis melo])

HSP 1 Score: 574.7 bits (1480), Expect = 4.2e-160
Identity = 274/274 (100.00%), Postives = 274/274 (100.00%), Query Frame = 0


Query: 1   MSILPKGDSIQIREVWNANLEEEFALIRAIVDKFNYIAMDTEFPGVVLRPLGTFKNINDF 60
           MSILPKGDSIQIREVWNANLEEEFALIRAIVDKFNYIAMDTEFPGVVLRPLGTFKNINDF
Sbjct: 1   MSILPKGDSIQIREVWNANLEEEFALIRAIVDKFNYIAMDTEFPGVVLRPLGTFKNINDF 60

Query: 61  NYRTLKDNVEMLKLIQLGLTFSDEDGNLPTCGTDKFCIWQFNFREFNIGSDIFASDSIEL 120
           NYRTLKDNVEMLKLIQLGLTFSDEDGNLPTCGTDKFCIWQFNFREFNIGSDIFASDSIEL
Sbjct: 61  NYRTLKDNVEMLKLIQLGLTFSDEDGNLPTCGTDKFCIWQFNFREFNIGSDIFASDSIEL 120

Query: 121 LRQCGIDFQKNNEEGIDVNRFGELLMSSGVVLNDDVNWVTFHSGYDFGYLLKLLTCRGLP 180
           LRQCGIDFQKNNEEGIDVNRFGELLMSSGVVLNDDVNWVTFHSGYDFGYLLKLLTCRGLP
Sbjct: 121 LRQCGIDFQKNNEEGIDVNRFGELLMSSGVVLNDDVNWVTFHSGYDFGYLLKLLTCRGLP 180

Query: 181 NDQAGFFELINVYFPVVYDIKHLMKFCNSLHGGLNKLAELLEVERIGVCHQAGSDSLLTA 240
           NDQAGFFELINVYFPVVYDIKHLMKFCNSLHGGLNKLAELLEVERIGVCHQAGSDSLLTA
Sbjct: 181 NDQAGFFELINVYFPVVYDIKHLMKFCNSLHGGLNKLAELLEVERIGVCHQAGSDSLLTA 240

Query: 241 CTFRKLRDTFFNGSIQKYAGVLYGLGVENGQRTN 275
           CTFRKLRDTFFNGSIQKYAGVLYGLGVENGQRTN
Sbjct: 241 CTFRKLRDTFFNGSIQKYAGVLYGLGVENGQRTN 274

[Close]

BLAST of PI0010175.1 vs. NCBI nr
Match: KAA0064893.1 (putative CCR4-associated factor 1-like protein 7 [Cucumis melo var. makuwa])

HSP 1 Score: 574.7 bits (1480), Expect = 4.2e-160
Identity = 274/274 (100.00%), Postives = 274/274 (100.00%), Query Frame = 0


Query: 1   MSILPKGDSIQIREVWNANLEEEFALIRAIVDKFNYIAMDTEFPGVVLRPLGTFKNINDF 60
           MSILPKGDSIQIREVWNANLEEEFALIRAIVDKFNYIAMDTEFPGVVLRPLGTFKNINDF
Sbjct: 61  MSILPKGDSIQIREVWNANLEEEFALIRAIVDKFNYIAMDTEFPGVVLRPLGTFKNINDF 120

Query: 61  NYRTLKDNVEMLKLIQLGLTFSDEDGNLPTCGTDKFCIWQFNFREFNIGSDIFASDSIEL 120
           NYRTLKDNVEMLKLIQLGLTFSDEDGNLPTCGTDKFCIWQFNFREFNIGSDIFASDSIEL
Sbjct: 121 NYRTLKDNVEMLKLIQLGLTFSDEDGNLPTCGTDKFCIWQFNFREFNIGSDIFASDSIEL 180

Query: 121 LRQCGIDFQKNNEEGIDVNRFGELLMSSGVVLNDDVNWVTFHSGYDFGYLLKLLTCRGLP 180
           LRQCGIDFQKNNEEGIDVNRFGELLMSSGVVLNDDVNWVTFHSGYDFGYLLKLLTCRGLP
Sbjct: 181 LRQCGIDFQKNNEEGIDVNRFGELLMSSGVVLNDDVNWVTFHSGYDFGYLLKLLTCRGLP 240

Query: 181 NDQAGFFELINVYFPVVYDIKHLMKFCNSLHGGLNKLAELLEVERIGVCHQAGSDSLLTA 240
           NDQAGFFELINVYFPVVYDIKHLMKFCNSLHGGLNKLAELLEVERIGVCHQAGSDSLLTA
Sbjct: 241 NDQAGFFELINVYFPVVYDIKHLMKFCNSLHGGLNKLAELLEVERIGVCHQAGSDSLLTA 300

Query: 241 CTFRKLRDTFFNGSIQKYAGVLYGLGVENGQRTN 275
           CTFRKLRDTFFNGSIQKYAGVLYGLGVENGQRTN
Sbjct: 301 CTFRKLRDTFFNGSIQKYAGVLYGLGVENGQRTN 334

[Close]

BLAST of PI0010175.1 vs. NCBI nr
Match: XP_004138704.1 (probable CCR4-associated factor 1 homolog 7 [Cucumis sativus] >KGN62988.1 hypothetical protein Csa_022642 [Cucumis sativus])

HSP 1 Score: 573.5 bits (1477), Expect = 9.4e-160
Identity = 273/274 (99.64%), Postives = 274/274 (100.00%), Query Frame = 0


Query: 1   MSILPKGDSIQIREVWNANLEEEFALIRAIVDKFNYIAMDTEFPGVVLRPLGTFKNINDF 60
           MSILPKGDSIQIREVWNANLEEEFALIRAIVDKFNYIAMDTEFPGVVLRPLGTFKNINDF
Sbjct: 1   MSILPKGDSIQIREVWNANLEEEFALIRAIVDKFNYIAMDTEFPGVVLRPLGTFKNINDF 60

Query: 61  NYRTLKDNVEMLKLIQLGLTFSDEDGNLPTCGTDKFCIWQFNFREFNIGSDIFASDSIEL 120
           NYRTLKDNVEMLKLIQLGLTFSDEDGNLPTCGTDKFCIWQFNFREFNIGSDIFASDSIEL
Sbjct: 61  NYRTLKDNVEMLKLIQLGLTFSDEDGNLPTCGTDKFCIWQFNFREFNIGSDIFASDSIEL 120

Query: 121 LRQCGIDFQKNNEEGIDVNRFGELLMSSGVVLNDDVNWVTFHSGYDFGYLLKLLTCRGLP 180
           LRQCGIDFQKNNEEGIDVNRFGELLMSSGVVLNDDVNWVTFHSGYDFGYLLKLLTCRGLP
Sbjct: 121 LRQCGIDFQKNNEEGIDVNRFGELLMSSGVVLNDDVNWVTFHSGYDFGYLLKLLTCRGLP 180

Query: 181 NDQAGFFELINVYFPVVYDIKHLMKFCNSLHGGLNKLAELLEVERIGVCHQAGSDSLLTA 240
           NDQAGFFELINVYFPV+YDIKHLMKFCNSLHGGLNKLAELLEVERIGVCHQAGSDSLLTA
Sbjct: 181 NDQAGFFELINVYFPVLYDIKHLMKFCNSLHGGLNKLAELLEVERIGVCHQAGSDSLLTA 240

Query: 241 CTFRKLRDTFFNGSIQKYAGVLYGLGVENGQRTN 275
           CTFRKLRDTFFNGSIQKYAGVLYGLGVENGQRTN
Sbjct: 241 CTFRKLRDTFFNGSIQKYAGVLYGLGVENGQRTN 274

[Close]

BLAST of PI0010175.1 vs. NCBI nr
Match: XP_038885551.1 (probable CCR4-associated factor 1 homolog 7 [Benincasa hispida])

HSP 1 Score: 562.0 bits (1447), Expect = 2.8e-156
Identity = 266/274 (97.08%), Postives = 272/274 (99.27%), Query Frame = 0


Query: 1   MSILPKGDSIQIREVWNANLEEEFALIRAIVDKFNYIAMDTEFPGVVLRPLGTFKNINDF 60
           MSILPKGDSIQIREVWNANLEEEFALIR IVD+FNYIAMDTEFPGVVLRPLG FKNINDF
Sbjct: 1   MSILPKGDSIQIREVWNANLEEEFALIREIVDEFNYIAMDTEFPGVVLRPLGAFKNINDF 60

Query: 61  NYRTLKDNVEMLKLIQLGLTFSDEDGNLPTCGTDKFCIWQFNFREFNIGSDIFASDSIEL 120
           NYRTLKDNV+MLKLIQLGLTFSDE+GNLPTCGTDKFCIWQFNFREFNIG+DIFASDSIEL
Sbjct: 61  NYRTLKDNVDMLKLIQLGLTFSDENGNLPTCGTDKFCIWQFNFREFNIGNDIFASDSIEL 120

Query: 121 LRQCGIDFQKNNEEGIDVNRFGELLMSSGVVLNDDVNWVTFHSGYDFGYLLKLLTCRGLP 180
           LRQCGIDFQKNNEEGIDVNRFGELLMSSGVVLN+DVNWVTFHSGYDFGYLLKLLTCRGLP
Sbjct: 121 LRQCGIDFQKNNEEGIDVNRFGELLMSSGVVLNNDVNWVTFHSGYDFGYLLKLLTCRGLP 180

Query: 181 NDQAGFFELINVYFPVVYDIKHLMKFCNSLHGGLNKLAELLEVERIGVCHQAGSDSLLTA 240
           NDQAGFFELINVYFPVVYDIKHLMKFCNSLHGGLNKLAELLEVERIGVCHQAGSDSLLTA
Sbjct: 181 NDQAGFFELINVYFPVVYDIKHLMKFCNSLHGGLNKLAELLEVERIGVCHQAGSDSLLTA 240

Query: 241 CTFRKLRDTFFNGSIQKYAGVLYGLGVENGQRTN 275
           CTFRKLRDTFFNGSIQKYAGVLYGLGV+NGQRTN
Sbjct: 241 CTFRKLRDTFFNGSIQKYAGVLYGLGVDNGQRTN 274

[Close]

BLAST of PI0010175.1 vs. NCBI nr
Match: XP_022996818.1 (probable CCR4-associated factor 1 homolog 7 [Cucurbita maxima] >XP_022996819.1 probable CCR4-associated factor 1 homolog 7 [Cucurbita maxima])

HSP 1 Score: 542.0 bits (1395), Expect = 3.0e-150
Identity = 258/274 (94.16%), Postives = 264/274 (96.35%), Query Frame = 0


Query: 1   MSILPKGDSIQIREVWNANLEEEFALIRAIVDKFNYIAMDTEFPGVVLRPLGTFKNINDF 60
           MSILPKGDSIQIREVWN NLEEEFALIR IVDKFNYIAMDTEFPGVVLRPLG FKNIND+
Sbjct: 1   MSILPKGDSIQIREVWNDNLEEEFALIREIVDKFNYIAMDTEFPGVVLRPLGAFKNINDY 60

Query: 61  NYRTLKDNVEMLKLIQLGLTFSDEDGNLPTCGTDKFCIWQFNFREFNIGSDIFASDSIEL 120
           NY+TLKDNV+MLKLIQLGLTFSDE+GN PTCGTD FCIWQFNFREFNIGSDIFASDSIEL
Sbjct: 61  NYQTLKDNVDMLKLIQLGLTFSDENGNFPTCGTDNFCIWQFNFREFNIGSDIFASDSIEL 120

Query: 121 LRQCGIDFQKNNEEGIDVNRFGELLMSSGVVLNDDVNWVTFHSGYDFGYLLKLLTCRGLP 180
           LRQCGIDFQKNNEEGIDVNRFGELLMSSGVVLN DVNWVTFHSGYDFGYLLKLLTCRGLP
Sbjct: 121 LRQCGIDFQKNNEEGIDVNRFGELLMSSGVVLNADVNWVTFHSGYDFGYLLKLLTCRGLP 180

Query: 181 NDQAGFFELINVYFPVVYDIKHLMKFCNSLHGGLNKLAELLEVERIGVCHQAGSDSLLTA 240
             Q GFF+LINVYFPVVYDIKHLMKFCNSLHGGLNKLAELLEVERIGVCHQAGSDSLLTA
Sbjct: 181 EKQDGFFDLINVYFPVVYDIKHLMKFCNSLHGGLNKLAELLEVERIGVCHQAGSDSLLTA 240

Query: 241 CTFRKLRDTFFNGSIQKYAGVLYGLGVENGQRTN 275
            TFRKLR+TFFNGSIQKYAGVLYGLGVENGQRTN
Sbjct: 241 STFRKLRNTFFNGSIQKYAGVLYGLGVENGQRTN 274

[Close]

BLAST of PI0010175.1 vs. TAIR 10
Match: AT2G32070.1 (Polynucleotidyl transferase, ribonuclease H-like superfamily protein )

HSP 1 Score: 449.5 bits (1155), Expect = 1.9e-126
Identity = 208/272 (76.47%), Postives = 240/272 (88.24%), Query Frame = 0


Query: 1   MSILPKGDSIQIREVWNANLEEEFALIRAIVDKFNYIAMDTEFPGVVLRPLGTFKNINDF 60
           MS+  K DSIQIREVWN NLE E ALIR +VD F ++AMDTEFPG+V RP+GTFK   ++
Sbjct: 1   MSLFLKDDSIQIREVWNDNLESEMALIREVVDDFPFVAMDTEFPGIVCRPVGTFKTNTEY 60

Query: 61  NYRTLKDNVEMLKLIQLGLTFSDEDGNLPTCGTD-KFCIWQFNFREFNIGSDIFASDSIE 120
           +Y TLK NV +LK+IQLGLTFSDE GNLPTCGTD K+CIWQFNFREF++ SDI+A+DSIE
Sbjct: 61  HYETLKTNVNILKMIQLGLTFSDEKGNLPTCGTDNKYCIWQFNFREFDLESDIYATDSIE 120

Query: 121 LLRQCGIDFQKNNEEGIDVNRFGELLMSSGVVLNDDVNWVTFHSGYDFGYLLKLLTCRGL 180
           LLRQ GIDF KNNE GID  RF ELLMSSG+VLN++V+WVTFHSGYDFGYLLKLLTC+ L
Sbjct: 121 LLRQSGIDFVKNNEFGIDSKRFAELLMSSGIVLNENVHWVTFHSGYDFGYLLKLLTCQNL 180

Query: 181 PNDQAGFFELINVYFPVVYDIKHLMKFCNSLHGGLNKLAELLEVERIGVCHQAGSDSLLT 240
           P  Q GFFE+I+VYFP VYDIKHLMKFCNSLHGGLNKLAELL+VER+G+CHQAGSDSLLT
Sbjct: 181 PETQTGFFEMISVYFPRVYDIKHLMKFCNSLHGGLNKLAELLDVERVGICHQAGSDSLLT 240

Query: 241 ACTFRKLRDTFFNGSIQKYAGVLYGLGVENGQ 272
           +CTFRKL++ FF GS++KY+GVLYGLGVENGQ
Sbjct: 241 SCTFRKLQENFFIGSMEKYSGVLYGLGVENGQ 272

[Close]

BLAST of PI0010175.1 vs. TAIR 10
Match: AT1G80780.1 (Polynucleotidyl transferase, ribonuclease H-like superfamily protein )

HSP 1 Score: 447.6 bits (1150), Expect = 7.3e-126
Identity = 205/271 (75.65%), Postives = 237/271 (87.45%), Query Frame = 0


Query: 1   MSILPKGDSIQIREVWNANLEEEFALIRAIVDKFNYIAMDTEFPGVVLRPLGTFKNINDF 60
           MS+  K DSIQIREVWN NL+EE  LIR +VD F Y+AMDTEFPG+V+RP+GTFK+  D+
Sbjct: 1   MSLFLKDDSIQIREVWNDNLQEEMDLIRDVVDDFPYVAMDTEFPGIVVRPVGTFKSNADY 60

Query: 61  NYRTLKDNVEMLKLIQLGLTFSDEDGNLPTCGTDKFCIWQFNFREFNIGSDIFASDSIEL 120
           +Y TLK NV +LK+IQLGLTFS+E GNLPTCGTDK+CIWQFNFREF++ SDIFA DSIEL
Sbjct: 61  HYETLKTNVNILKMIQLGLTFSNEQGNLPTCGTDKYCIWQFNFREFDLDSDIFALDSIEL 120

Query: 121 LRQCGIDFQKNNEEGIDVNRFGELLMSSGVVLNDDVNWVTFHSGYDFGYLLKLLTCRGLP 180
           L+Q GID  KN  +GID  RF ELLMSSG+VLN++V+WVTFHSGYDFGYLLKLLTC+ LP
Sbjct: 121 LKQSGIDLAKNTLDGIDSKRFAELLMSSGIVLNENVHWVTFHSGYDFGYLLKLLTCQNLP 180

Query: 181 NDQAGFFELINVYFPVVYDIKHLMKFCNSLHGGLNKLAELLEVERIGVCHQAGSDSLLTA 240
           + Q  FF+LINVYFP VYDIKHLMKFCNSLHGGLNKLAELLEVER+G+CHQAGSDSLLT+
Sbjct: 181 DSQTDFFKLINVYFPTVYDIKHLMKFCNSLHGGLNKLAELLEVERVGICHQAGSDSLLTS 240

Query: 241 CTFRKLRDTFFNGSIQKYAGVLYGLGVENGQ 272
           CTFRKL++ FF G + KY+GVLYGLGVENGQ
Sbjct: 241 CTFRKLKENFFVGPLHKYSGVLYGLGVENGQ 271

[Close]

BLAST of PI0010175.1 vs. TAIR 10
Match: AT1G80780.2 (Polynucleotidyl transferase, ribonuclease H-like superfamily protein )

HSP 1 Score: 447.6 bits (1150), Expect = 7.3e-126
Identity = 205/271 (75.65%), Postives = 237/271 (87.45%), Query Frame = 0


Query: 1   MSILPKGDSIQIREVWNANLEEEFALIRAIVDKFNYIAMDTEFPGVVLRPLGTFKNINDF 60
           MS+  K DSIQIREVWN NL+EE  LIR +VD F Y+AMDTEFPG+V+RP+GTFK+  D+
Sbjct: 1   MSLFLKDDSIQIREVWNDNLQEEMDLIRDVVDDFPYVAMDTEFPGIVVRPVGTFKSNADY 60

Query: 61  NYRTLKDNVEMLKLIQLGLTFSDEDGNLPTCGTDKFCIWQFNFREFNIGSDIFASDSIEL 120
           +Y TLK NV +LK+IQLGLTFS+E GNLPTCGTDK+CIWQFNFREF++ SDIFA DSIEL
Sbjct: 61  HYETLKTNVNILKMIQLGLTFSNEQGNLPTCGTDKYCIWQFNFREFDLDSDIFALDSIEL 120

Query: 121 LRQCGIDFQKNNEEGIDVNRFGELLMSSGVVLNDDVNWVTFHSGYDFGYLLKLLTCRGLP 180
           L+Q GID  KN  +GID  RF ELLMSSG+VLN++V+WVTFHSGYDFGYLLKLLTC+ LP
Sbjct: 121 LKQSGIDLAKNTLDGIDSKRFAELLMSSGIVLNENVHWVTFHSGYDFGYLLKLLTCQNLP 180

Query: 181 NDQAGFFELINVYFPVVYDIKHLMKFCNSLHGGLNKLAELLEVERIGVCHQAGSDSLLTA 240
           + Q  FF+LINVYFP VYDIKHLMKFCNSLHGGLNKLAELLEVER+G+CHQAGSDSLLT+
Sbjct: 181 DSQTDFFKLINVYFPTVYDIKHLMKFCNSLHGGLNKLAELLEVERVGICHQAGSDSLLTS 240

Query: 241 CTFRKLRDTFFNGSIQKYAGVLYGLGVENGQ 272
           CTFRKL++ FF G + KY+GVLYGLGVENGQ
Sbjct: 241 CTFRKLKENFFVGPLHKYSGVLYGLGVENGQ 271

[Close]

BLAST of PI0010175.1 vs. TAIR 10
Match: AT1G80780.3 (Polynucleotidyl transferase, ribonuclease H-like superfamily protein )

HSP 1 Score: 443.4 bits (1139), Expect = 1.4e-124
Identity = 203/269 (75.46%), Postives = 235/269 (87.36%), Query Frame = 0


Query: 1   MSILPKGDSIQIREVWNANLEEEFALIRAIVDKFNYIAMDTEFPGVVLRPLGTFKNINDF 60
           MS+  K DSIQIREVWN NL+EE  LIR +VD F Y+AMDTEFPG+V+RP+GTFK+  D+
Sbjct: 1   MSLFLKDDSIQIREVWNDNLQEEMDLIRDVVDDFPYVAMDTEFPGIVVRPVGTFKSNADY 60

Query: 61  NYRTLKDNVEMLKLIQLGLTFSDEDGNLPTCGTDKFCIWQFNFREFNIGSDIFASDSIEL 120
           +Y TLK NV +LK+IQLGLTFS+E GNLPTCGTDK+CIWQFNFREF++ SDIFA DSIEL
Sbjct: 61  HYETLKTNVNILKMIQLGLTFSNEQGNLPTCGTDKYCIWQFNFREFDLDSDIFALDSIEL 120

Query: 121 LRQCGIDFQKNNEEGIDVNRFGELLMSSGVVLNDDVNWVTFHSGYDFGYLLKLLTCRGLP 180
           L+Q GID  KN  +GID  RF ELLMSSG+VLN++V+WVTFHSGYDFGYLLKLLTC+ LP
Sbjct: 121 LKQSGIDLAKNTLDGIDSKRFAELLMSSGIVLNENVHWVTFHSGYDFGYLLKLLTCQNLP 180

Query: 181 NDQAGFFELINVYFPVVYDIKHLMKFCNSLHGGLNKLAELLEVERIGVCHQAGSDSLLTA 240
           + Q  FF+LINVYFP VYDIKHLMKFCNSLHGGLNKLAELLEVER+G+CHQAGSDSLLT+
Sbjct: 181 DSQTDFFKLINVYFPTVYDIKHLMKFCNSLHGGLNKLAELLEVERVGICHQAGSDSLLTS 240

Query: 241 CTFRKLRDTFFNGSIQKYAGVLYGLGVEN 270
           CTFRKL++ FF G + KY+GVLYGLGVEN
Sbjct: 241 CTFRKLKENFFVGPLHKYSGVLYGLGVEN 269

[Close]

BLAST of PI0010175.1 vs. TAIR 10
Match: AT5G10960.1 (Polynucleotidyl transferase, ribonuclease H-like superfamily protein )

HSP 1 Score: 442.6 bits (1137), Expect = 2.3e-124
Identity = 205/268 (76.49%), Postives = 236/268 (88.06%), Query Frame = 0


Query: 6   KGDSIQIREVWNANLEEEFALIRAIVDKFNYIAMDTEFPGVVLRPLGTFKNINDFNYRTL 65
           K DSI IREVW+ NL EEFALIR IVDKF+YIAMDTEFPGVVL+P+ TFK  ND NYRTL
Sbjct: 6   KEDSIMIREVWDYNLVEEFALIREIVDKFSYIAMDTEFPGVVLKPVATFKYNNDLNYRTL 65

Query: 66  KDNVEMLKLIQLGLTFSDEDGNLPTCGTDKFCIWQFNFREFNIGSDIFASDSIELLRQCG 125
           K+NV++LKLIQ+GLTFSDE+GNLPTCGTDKFCIWQFNFREFNIG DI+AS+SIELLRQCG
Sbjct: 66  KENVDLLKLIQVGLTFSDENGNLPTCGTDKFCIWQFNFREFNIGEDIYASESIELLRQCG 125

Query: 126 IDFQKNNEEGIDVNRFGELLMSSGVVLNDDVNWVTFHSGYDFGYLLKLLTCRGLPNDQAG 185
           IDF+KN E+GIDV RFGEL+MSSG+VLND ++WVTFH GYDFGYL+KLLTC+ LP  QA 
Sbjct: 126 IDFKKNIEKGIDVVRFGELMMSSGIVLNDAISWVTFHGGYDFGYLVKLLTCKELPLKQAD 185

Query: 186 FFELINVYFPVVYDIKHLMKFCNSLHGGLNKLAELLEVERIGVCHQAGSDSLLTACTFRK 245
           FF+L+ VYFP VYDIKHLM FCN L GGLN+LAEL+ VER+G+CHQAGSDSLLT  +FRK
Sbjct: 186 FFKLLYVYFPTVYDIKHLMTFCNGLFGGLNRLAELMGVERVGICHQAGSDSLLTLGSFRK 245

Query: 246 LRDTFFNGSIQKYAGVLYGLGVENGQRT 274
           L++ +F GS +KY GVLYGLGVE+G  T
Sbjct: 246 LKERYFPGSTEKYTGVLYGLGVEDGTTT 273

The following BLAST results are available for this feature:

BLAST of PI0010175.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SKZ2	2.7e-125	76.47	Probable CCR4-associated factor 1 homolog 7 OS=Arabidopsis thaliana OX=3702 GN=C...	[more]
Q9SAI2	1.0e-124	75.65	Probable CCR4-associated factor 1 homolog 6 OS=Arabidopsis thaliana OX=3702 GN=C...	[more]
Q9LEU4	3.3e-123	76.49	Probable CCR4-associated factor 1 homolog 10 OS=Arabidopsis thaliana OX=3702 GN=...	[more]
Q9S9P2	9.0e-97	63.64	Probable CCR4-associated factor 1 homolog 2 OS=Arabidopsis thaliana OX=3702 GN=C...	[more]
Q3ZC01	9.1e-81	55.39	CCR4-NOT transcription complex subunit 7 OS=Bos taurus OX=9913 GN=CNOT7 PE=2 SV=...	[more]

BLAST of PI0010175.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7V9Q6	2.0e-160	100.00	Poly(A)-specific ribonuclease OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_sc...	[more]
A0A1S3BD45	2.0e-160	100.00	Poly(A)-specific ribonuclease OS=Cucumis melo OX=3656 GN=LOC103488344 PE=3 SV=1	[more]
A0A0A0LMH2	4.6e-160	99.64	Poly(A)-specific ribonuclease OS=Cucumis sativus OX=3659 GN=Csa_2G382610 PE=3 SV...	[more]
A0A6J1KC39	1.5e-150	94.16	Poly(A)-specific ribonuclease OS=Cucurbita maxima OX=3661 GN=LOC111491945 PE=3 S...	[more]
A0A6J1HCG0	5.6e-150	94.16	Poly(A)-specific ribonuclease OS=Cucurbita moschata OX=3662 GN=LOC111462726 PE=3...	[more]

BLAST of PI0010175.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008445259.1	4.2e-160	100.00	PREDICTED: probable CCR4-associated factor 1 homolog 7 [Cucumis melo]	[more]
KAA0064893.1	4.2e-160	100.00	putative CCR4-associated factor 1-like protein 7 [Cucumis melo var. makuwa]	[more]
XP_004138704.1	9.4e-160	99.64	probable CCR4-associated factor 1 homolog 7 [Cucumis sativus] >KGN62988.1 hypoth...	[more]
XP_038885551.1	2.8e-156	97.08	probable CCR4-associated factor 1 homolog 7 [Benincasa hispida]	[more]
XP_022996818.1	3.0e-150	94.16	probable CCR4-associated factor 1 homolog 7 [Cucurbita maxima] >XP_022996819.1 p...	[more]

BLAST of PI0010175.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G32070.1	1.9e-126	76.47	Polynucleotidyl transferase, ribonuclease H-like superfamily protein	[more]
AT1G80780.1	7.3e-126	75.65	Polynucleotidyl transferase, ribonuclease H-like superfamily protein	[more]
AT1G80780.2	7.3e-126	75.65	Polynucleotidyl transferase, ribonuclease H-like superfamily protein	[more]
AT1G80780.3	1.4e-124	75.46	Polynucleotidyl transferase, ribonuclease H-like superfamily protein	[more]
AT5G10960.1	2.3e-124	76.49	Polynucleotidyl transferase, ribonuclease H-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006941	Ribonuclease CAF1	PFAM	PF04857	CAF1	coord: 15..136 e-value: 9.9E-11 score: 41.5
IPR006941	Ribonuclease CAF1	PFAM	PF04857	CAF1	coord: 161..243 e-value: 1.3E-5 score: 24.7
IPR036397	Ribonuclease H superfamily	GENE3D	3.30.420.10		coord: 2..269 e-value: 1.4E-98 score: 331.4
None	No IPR available	PANTHER	PTHR10797:SF68	CCR4-ASSOCIATED FACTOR 1 HOMOLOG 10-RELATED	coord: 1..274
IPR039637	CCR4-NOT transcription complex subunit 7/8/Pop2	PANTHER	PTHR10797	CCR4-NOT TRANSCRIPTION COMPLEX SUBUNIT	coord: 1..274
IPR012337	Ribonuclease H-like superfamily	SUPERFAMILY	53098	Ribonuclease H-like	coord: 12..265

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
PI0010175	PI0010175	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
PI0010175.1-exon	PI0010175.1-exon-chr03:4555816..4556356	exon
PI0010175.1-exon	PI0010175.1-exon-chr03:4556658..4556708	exon
PI0010175.1-exon	PI0010175.1-exon-chr03:4556779..4556856	exon
PI0010175.1-exon	PI0010175.1-exon-chr03:4556982..4559001	exon

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
PI0010175.1-three_prime_utr	PI0010175.1-three_prime_utr-chr03:4555816..4556356	three_prime_UTR
PI0010175.1-three_prime_utr	PI0010175.1-three_prime_utr-chr03:4556658..4556708	three_prime_UTR
PI0010175.1-three_prime_utr	PI0010175.1-three_prime_utr-chr03:4556779..4556856	three_prime_UTR
PI0010175.1-three_prime_utr	PI0010175.1-three_prime_utr-chr03:4556982..4557648	three_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
PI0010175.1-cds	PI0010175.1-cds-chr03:4557649..4558473	CDS

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
PI0010175.1-five_prime_utr	PI0010175.1-five_prime_utr-chr03:4558474..4559001	five_prime_UTR

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
PI0010175.1	PI0010175.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0043928	exonucleolytic catabolism of deadenylated mRNA
biological_process	GO:0090503	RNA phosphodiester bond hydrolysis, exonucleolytic
cellular_component	GO:0030014	CCR4-NOT complex
cellular_component	GO:0030015	CCR4-NOT core complex
cellular_component	GO:0005634	nucleus
cellular_component	GO:0000932	P-body
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0004535	poly(A)-specific ribonuclease activity