PI0009900.1 (mRNA) Melon (PI 482460) v1

Overview


Name	PI0009900.1
Type	mRNA
Organism	Cucumis metuliferus (Melon (PI 482460) v1)
Description	Unknown protein
Location	chr06: 15896390 .. 15897216 (+)
Sequence length	471
RNA-Seq Expression	PI0009900.1
Synteny	PI0009900.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTGGACACAAAGTGAGGTATAACGCCAATAGGGAAGTACCAACACTTCACGCACAATCTGAATACAGAAGCGAGTGTTTGGTACTTCTTCATAAAAAAGAAGATTACGCCTTCACGTCACGACAGTACTATCGTGTTGGACAAAGCGATGCTTCTCTACTGCATTTTGGAAGAGTTACCCATCAACTTAGGCAAAATAGTCTGTCAGCAAATCCATTCGTGAGTAAGGCACCCACGCAGTGCAAGACCCTTCCCACATTTAATAGAGCAACTCTGTTTGAAGGCATGCCTCGCGTTAAAGACTTTCCCCGCGATACCAGTCAAAGATGGCCTATGCTCCATTACAGACCTTCGCCGCATCATCAACCTCCATAAAAACAAGGCTGAAACTTGACTCCTCAAAACCTTGAAAGGTGGAAAAGGCGAGAAAGAGGATGGTGAAGTGGAGATTGAGGAGGAAGAAATGGAAAGTCCAACAACAGTCCCACTAATTCACAAGAGGAAAGGCGAGGGAGGGGCTTCTAGGTCAAAGAAGAAGAAGAAACATAACGCTGATAACTCGTATATTTATACAAGTTATTGCGGCCTTTCAGGTAGAATAATGAGGATATAACGCGATAGGAAAAGAAATATTTGTAATTATTAGCAATTGTAAAACAAAAATTGCATTACACAAAGCAAAAGAGCCAAATCCCTGTTTTACGTGTTTTTATTATGCTTTATGCAGAATTTCAAGCAAACAAGGGATGTCAGGCGAGGAAGTCTACGCGAAGAAGCTTCAGGTGAGGAAGTACGCGAACAACCAGGCGATCGTGAATACATAG

mRNA sequence

ATGGCTGGACACAAAGTGAGGTATAACGCCAATAGGGAAGTACCAACACTTCACGCACAATCTGAATACAGAAGCGAGTGTTTGGTACTTCTTCATAAAAAAGAAGATTACGCCTTCACGTCACGACAGTACTATCGTGTTGGACAAAGCGATGCTTCTCTACTGCATTTTGGAAGAGTTACCCATCAACTTAGGCAAAATAGTCTGTCAGCAAATCCATTCGTGAGTGGAAAAGGCGAGAAAGAGGATGGTGAAGTGGAGATTGAGGAGGAAGAAATGGAAAGTCCAACAACAGTCCCACTAATTCACAAGAGGAAAGGCGAGGGAGGGGCTTCTAGGTCAAAGAAGAAGAAGAAACATAACGCTGATAACTCAATTTCAAGCAAACAAGGGATGTCAGGCGAGGAAGTCTACGCGAAGAAGCTTCAGGTGAGGAAGTACGCGAACAACCAGGCGATCGTGAATACATAG

Coding sequence (CDS)

ATGGCTGGACACAAAGTGAGGTATAACGCCAATAGGGAAGTACCAACACTTCACGCACAATCTGAATACAGAAGCGAGTGTTTGGTACTTCTTCATAAAAAAGAAGATTACGCCTTCACGTCACGACAGTACTATCGTGTTGGACAAAGCGATGCTTCTCTACTGCATTTTGGAAGAGTTACCCATCAACTTAGGCAAAATAGTCTGTCAGCAAATCCATTCGTGAGTGGAAAAGGCGAGAAAGAGGATGGTGAAGTGGAGATTGAGGAGGAAGAAATGGAAAGTCCAACAACAGTCCCACTAATTCACAAGAGGAAAGGCGAGGGAGGGGCTTCTAGGTCAAAGAAGAAGAAGAAACATAACGCTGATAACTCAATTTCAAGCAAACAAGGGATGTCAGGCGAGGAAGTCTACGCGAAGAAGCTTCAGGTGAGGAAGTACGCGAACAACCAGGCGATCGTGAATACATAG

Protein sequence

MAGHKVRYNANREVPTLHAQSEYRSECLVLLHKKEDYAFTSRQYYRVGQSDASLLHFGRVTHQLRQNSLSANPFVSGKGEKEDGEVEIEEEEMESPTTVPLIHKRKGEGGASRSKKKKKHNADNSISSKQGMSGEEVYAKKLQVRKYANNQAIVNT

Homology

The following BLAST results are available for this feature:

BLAST of PI0009900.1 vs.


Match Name	E-value	Identity	Description

BLAST of PI0009900.1 vs.


Match Name	E-value	Identity	Description

BLAST of PI0009900.1 vs.


Match Name	E-value	Identity	Description

BLAST of PI0009900.1 vs.


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 71..135

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
PI0009900	PI0009900	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
PI0009900.1-exon	PI0009900.1-exon-chr06:15896390..15896615	exon
PI0009900.1-exon	PI0009900.1-exon-chr06:15896806..15896953	exon
PI0009900.1-exon	PI0009900.1-exon-chr06:15897120..15897216	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
PI0009900.1-cds	PI0009900.1-cds-chr06:15896390..15896615	CDS
PI0009900.1-cds	PI0009900.1-cds-chr06:15896806..15896953	CDS
PI0009900.1-cds	PI0009900.1-cds-chr06:15897120..15897216	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
PI0009900.1	PI0009900.1-protein	polypeptide