PI0008765.1 (mRNA) Melon (PI 482460) v1

Overview


Name	PI0008765.1
Type	mRNA
Organism	Cucumis metuliferus (Melon (PI 482460) v1)
Description	Unknown protein
Location	chr06: 15219211 .. 15220050 (-)
Sequence length	615
RNA-Seq Expression	PI0008765.1
Synteny	PI0008765.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAGCCACCTTGGAGAGCCCAAACGTCTGTCAGAGGTGCTTTTCAAGGATTAATTTGCCAGAAAAGGTAATCATTACCTCCAATGCACCTGAAACCCTATAAAGTAACCCTCAAAGCCTCACTTTCATCTTTTCTTATACGTTGAAAAACAAAAAACTCTCTCAAATTCTCTCATCTTTTACCCAAATTTCCAGGAACCCCAATCTTTCAAAACCCTTCCAATTCCCAAATCCATTCCAGAAATGTCGAAAGAAGATCTTCCAGCCACTCTGATGAGCACTGATCTTCCAGCCATTCTGATGAGCACCAAAACGTTGAATGGAGGAGGGAGCAAGCACCGACTGAAGAAAGGAGTCGTAACCGAAACTCTCTGAAGCAACCTAAAAGGGTCGGAAGTCCTCAACACCCAACGCAAGGAGGTAAGTCCATCAAACGAATCATGACAGTGCAAGCCCTAAGTTTCAACCCTCCCTGCATTGAGCGACAAGCTCATTTTGATGGCCTTGAGTTGGAACGTGCTCATCCCAATCATGCCAGTATCCTAGAAGAGATTGAGCATAGAGAGAATGAAGAAATTTTTGGGAGACTGGCTGACTTACACCCTTCTGTGGCACGTGTAGTGGAGATGGGTATAGAATGCAAGCATGCCACTAGGACCATAAGGATTGAGGTGGTGAACAGACCATCAAAGGTCCAAGATTTGAACTTGGAAGATGAAGAGGTGGCTGCTGCAATAGCCATGGTCAGGGCGAGGAAAGAAGAAAAGAAAAAGGAAGAAATGGAGATAAAAGAAAAAGAAGAAAAAAAGAGAAAAATGAGAGAAGATCGAAGAAAATAG

mRNA sequence

ATGAAGCCACCTTGGAGAGCCCAAACGTCTGTCAGAGGTGCTTTTCAAGGATTAATTTGCCAGAAAAGCCATTCTGATGAGCACCAAAACGTTGAATGGAGGAGGGAGCAAGCACCGACTGAAGAAAGGAGTCGTAACCGAAACTCTCTGAAGCAACCTAAAAGGGTCGGAAGTCCTCAACACCCAACGCAAGGAGGTAAGTCCATCAAACGAATCATGACAGTGCAAGCCCTAAGTTTCAACCCTCCCTGCATTGAGCGACAAGCTCATTTTGATGGCCTTGAGTTGGAACGTGCTCATCCCAATCATGCCAGTATCCTAGAAGAGATTGAGCATAGAGAGAATGAAGAAATTTTTGGGAGACTGGCTGACTTACACCCTTCTGTGGCACGTGTAGTGGAGATGGGTATAGAATGCAAGCATGCCACTAGGACCATAAGGATTGAGGTGGTGAACAGACCATCAAAGGTCCAAGATTTGAACTTGGAAGATGAAGAGGTGGCTGCTGCAATAGCCATGGTCAGGGCGAGGAAAGAAGAAAAGAAAAAGGAAGAAATGGAGATAAAAGAAAAAGAAGAAAAAAAGAGAAAAATGAGAGAAGATCGAAGAAAATAG

Coding sequence (CDS)

ATGAAGCCACCTTGGAGAGCCCAAACGTCTGTCAGAGGTGCTTTTCAAGGATTAATTTGCCAGAAAAGCCATTCTGATGAGCACCAAAACGTTGAATGGAGGAGGGAGCAAGCACCGACTGAAGAAAGGAGTCGTAACCGAAACTCTCTGAAGCAACCTAAAAGGGTCGGAAGTCCTCAACACCCAACGCAAGGAGGTAAGTCCATCAAACGAATCATGACAGTGCAAGCCCTAAGTTTCAACCCTCCCTGCATTGAGCGACAAGCTCATTTTGATGGCCTTGAGTTGGAACGTGCTCATCCCAATCATGCCAGTATCCTAGAAGAGATTGAGCATAGAGAGAATGAAGAAATTTTTGGGAGACTGGCTGACTTACACCCTTCTGTGGCACGTGTAGTGGAGATGGGTATAGAATGCAAGCATGCCACTAGGACCATAAGGATTGAGGTGGTGAACAGACCATCAAAGGTCCAAGATTTGAACTTGGAAGATGAAGAGGTGGCTGCTGCAATAGCCATGGTCAGGGCGAGGAAAGAAGAAAAGAAAAAGGAAGAAATGGAGATAAAAGAAAAAGAAGAAAAAAAGAGAAAAATGAGAGAAGATCGAAGAAAATAG

Protein sequence

MKPPWRAQTSVRGAFQGLICQKSHSDEHQNVEWRREQAPTEERSRNRNSLKQPKRVGSPQHPTQGGKSIKRIMTVQALSFNPPCIERQAHFDGLELERAHPNHASILEEIEHRENEEIFGRLADLHPSVARVVEMGIECKHATRTIRIEVVNRPSKVQDLNLEDEEVAAAIAMVRARKEEKKKEEMEIKEKEEKKRKMREDRRK

Homology

The following BLAST results are available for this feature:

BLAST of PI0008765.1 vs.


Match Name	E-value	Identity	Description

BLAST of PI0008765.1 vs.


Match Name	E-value	Identity	Description

BLAST of PI0008765.1 vs.


Match Name	E-value	Identity	Description

BLAST of PI0008765.1 vs.


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 171..204
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 176..204
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 51..69
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..69
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 25..49

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
PI0008765	PI0008765	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
PI0008765.1-exon	PI0008765.1-exon-chr06:15219211..15219757	exon
PI0008765.1-exon	PI0008765.1-exon-chr06:15219983..15220050	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
PI0008765.1-cds	PI0008765.1-cds-chr06:15219211..15219757	CDS
PI0008765.1-cds	PI0008765.1-cds-chr06:15219983..15220050	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
PI0008765.1	PI0008765.1-protein	polypeptide