PI0008140.3 (mRNA) Melon (PI 482460) v1

Overview


Name	PI0008140.3
Type	mRNA
Organism	Cucumis metuliferus (Melon (PI 482460) v1)
Description	Copper ion binding isoform 1
Location	chr12: 17279435 .. 17284453 (+)
Sequence length	2919
RNA-Seq Expression	PI0008140.3
Synteny	PI0008140.3

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CGCGGAACGAGTATCGATTCATTTCTTAAATTGAAGGGCTTCAATTGGCATAATCTCCACGTATTTCGCCTTCAGAAATTTTGCATCTATAAAACCCTATTTGATATCCCAGTTCCTCTCAGCAACTTCCTCCGTTTTCTTCCCAAAACTGACTCTCTCTTCTTTTTCTTTCGGTAAGTAATCTTCTTCAATTAAGCTTCCATAGTTGTTCTATGTTTTCCCACAAATGTAATGTTTCCATTCAATCACTCGTATTCGTCTTTTTAGGAAAAGCAATCAATAGAAATGGCAGCAGCTAGGACCGCCGCTAGAATCTTTTCCCGAAGGTTTTCGAGCAGCGGTAAGATACTCAGCGAGGAAGAAAAGGCTGCTGAGAATATCTACATCAAGGTCCCCATCTTAACCCTAAACACCCACCTTTGATTTTTACGTTTTGCATTTTTTTTACTTGGGGAGCTTTTCTGATTATGTTTGGATTCTGCTGATTGTTGTTTCATAGATTATAATTATAAAACATTGAAAAAGTATAATTATAATCATAGCTTAATAGAAAAAGTGTGGTGTATTTGCTTGTTGCTGACCTACAGCTTGCTTGTTTGAGATGTTAAGTTTCTCGATGGGTCGAGTCTACTATTTTTTTCTATGTTTGTTAGGTTTTTTTTTTTGTTCGAAATCAGAATGATCAAACAAGAAATGATCGGGATGACTAAAACCAAATGGTACGCGTGTACGAAGTAGTTTATTCCATTCAAACTTAGACCCTTAACTACATTTCATGTATATATACTTGTAAACATTGTATGATAAAGTGTTTTAGACGAGATATAATTAAATTTGCCATCACACATGAGCCTAAACTTTTATGTCAATCGATGATTAAGATGGTATCAAAGTACATGGTTTAGGGAGGTCCATCCCAGAGGAGGTGGGAGGTTCAATCTTCATTCCCTCAATTGTTGTACTAAAAACAAAATCATTTCAAAATTTATTGATTGGATCATGGATGTCGTTGAGACAAATAGTCCTCTACTGCAAGCTAAGTAAGAAGTGGTATAAAATAAAACTATTTCAAGTATCAAATATGAAGGGAGCAGATTTGATGTACCCAGCTGTTCTTTTATCTGGAAGGGGCTTTCTTGTAATCCATCTGGATTGTTTTGTTTTTATTATGTTTTTGTGGGCTTTTTTGTTTACCAGCTGGTGTAGGGCTTGCGTTGGTTATTTATAATGTTTCCTGTTAGTTAGTTAGTTAGTTAGTTAGTTAGTTAGTTAGTTAGTTAGTTAGGTTGTTTCAGCTTGTTCTTAAATGCCTGTAAATATACAGCTTTAGAGTCTGTTTTTGGCTAATTTTCAATTAAATAAAACAGCCAAACTAACAAATCTACAATCCTTTATATTTCTCTAACATCCCATTTTATAGTAGGTATGATGGTCTTATTGAAGTAGAGGATTGGTTTCTTGATATTGCCATAGAGACCCATGACTTTGTAATCAAAATGGCTTCTTCAGTTCTTAGTGCAGTTCTATAGTTCTTCATTATGGACTAGAGTATAATTAAATGCTTTTTCCAGGTAGTTGTACTTTCTTTTTTCAGGCCTTTTCCAGGTCAGAGTATAATAGTAATAGATTCTTCTTTTCATGTGGAACATTTGTCTAAGACTCTAAGTTGAAGCATCAAAGTACCTAGTCTTGGGGATTTTTCAATGCCAAGAGTCTAGTCATTTCTCTGCATATGAGTGAACATTCTCCGTTACCATCTGCTTGCTTATGTGGTCTTTTTTACCTTATTTCTATCCATACTTCATTTTGTTGAAATTTTGCAGAAAACTGAACAAGAAAAACTGGAGAAGCTTGCACGCAAGGTATGCTTTGTAGTTTCTTAAAACTTTCATTTGGGAATCTAGAGTTTGAAATTATGGGATCTTGAATAATCTAGCATTTCACATAGTAAACTTTTACAGTTCTCTTGATAATTGTAAAACAACTTAATTTTACTGAAGTAATTAAATTGCATGTTTTTGTTCTGAGGCTGAGTATTGATGGCCCCAAATCTTTAAGGTTTACAAGCGTAGGTGCATGAGGAAGAATCAAGGAATGTAATGAGGTTTATGTAGGGATTGTGAGGTCCATTTATATTGCGTTATTTCCTGTTAGTAGAATTTGGTTGGGAAGAGTTCTTGCGGTTTGTGATTTAAGGGGAGAGCATTATTAATTGGAGGTATCATTGGCTGTGTTTTCTGTTGAGTTCTCTTCGGAGAAATTGAGAGATGGAATGATCTCAAAATTTACCATGATACATGTTGATTAATAAAATTGATTGCCAGACTTGTATCACGCATCTAGGTCTATTGGTAAATGGTAATATAGTTTTCTTTTTTTGAGTGTGAGCTGAATATTCTAATCTTCTTTAGGCTACAAATGCATTATATTTGTAGGGACCTAAACCAGAAGAAAAGCTAGGAGGGTCAGTAGCTGATTCCGTTCCAAGCAGCTCAGCCTCAGCCTCGGCACCAGGAGCATCAACAGAGAAAATATCGACTGACAAACATCGCAATTATGCTGTTGTAGCTGGAACTGTAACTATTCTTGGTGCTCTCGGATGGTATCTCAAATCTAAAAAGAAGCCAGAAGAAGTCCATGATTGAGTTAACAGATGAAGTCATTTTCATATCACTAGCATCTGAAGCATGGGGAGGTGAGTTTTCTCCTTTCCTCTGCTAAATAAACCAAAAATCAAGATGCGTATGGATCTTGGTTAATGAATACATTATGTTCATATTGATGTTTCTCCTTGAAAATGGTTTTTTTGGCCTTATTTCTGTTTACTTTCATGGAAAATTAACCCTGAGACGTTGACAGCATAAAACATGTTCTGTGACAAAGACTTGGTTTATTGGATTTCATTTTCACATTCTCTTCAATGATATTGAGTAAATACTCTTTTTCTATCGTTTCTAAAAGAACAAAATAAGAAAAAAAAGAAGAATACTCCGTTTCCATTACTTTGTAAAAAGCTAATATGCATCGCCTAATCCATGCTCTAAAGCATAATGTTCAAACTTTTGAGTTTTTACAACCATAAGCATAACCTTTTTCTTTTTTAGCTTAAATGCTTAACGCATAATGGTCATAATTTCAGTGGATCACGGCGACAATGCCATTCTGATTAGACATAATTTTATAAACGAATTTGTTTTTTTTTTCCCTTTTTCCTTTTTTGGCTAAGGTGGGTTGGAATGAAGATTTCTTGGTGTATTTCATATTTTCAAAGTTGATTCAGCGGAGAAATAATTCTTGACATGATCATCGGTAATAGTTGAAATTATCTGTGATATTCTTACTTGACTATTCGCTCCAAGAAGAAATGATTTGTTGTGTTGTGATTACAGAGAAATAATGGCTACTAAAGGTGTGTAGACACTACCAATACCATTTACAATGATGTGGGGAAATTCTTACAACTATGCAAAGTACTTACTCCTAATGCATATGTTTAAATAGTTCGGTGTTTAAATAGTTTGGATTTAGGACTTGAGTAGATAATAAAATGTTTTTCAAAAGTTTTGTTGGAAATGTACTTGAATGTTTTTCAAAACTTATTTTGAGTGGTTGTTAAACACTTCAAATTTTTTTAAGATGTCATATTTTTAAAATTAAACGCTTAGATTCAAGTGGAATAAAACACATCTTAGGTCAATAAACACTCCTTGATTTACTTTCTTAAAAATTAAGCAACTTAATTTTTAAAAACTAAATAACTATGAAAATGAGTTTTTTTTTTTTTTTCATTTGCTTGAAAAAGGATGATGTTTTTTAGTTGAGAATTAAAAATTGTTTTTCAACTAGAAAATGAGAGTAAATAAGTTTAGTTCAACTAAATCGGAAATTGGTTTTAAGAAATTATTTTTTTCGAATACCATAGCTAACGTGAAATAGCTTATGGTCAACACTTGAATTGGTCGCAGCCTAGGGAGCTAACCTCCTTTGGGTTTGCTTTTTCAATTATGTTATGTTTACGGATGGTGAAACACATTATATGTAACATAATTTGAAAAATGGGATCTATTTTATTATGTTTGTTATTATCTACCAGTGTTTTGTATTTCTTTCGACAAGTGGAACCTAGTTGGAAAATTGTAATAAACTAATGTAATCTAAATGAAGTCAAAGGGATAATAAATCGAATTGTGTTTGAATATTGTATGAGTTCCACACGTCAGCCGTTACCAATGTATCGCTCTATTGTTTTTGATAACTGATATTGTTTATATATTCCTTAGGGTTATCGATCTATTAATTGATAACTGATATTGTTTATATATTCCTTAGGGTTATCGATCTATTAATTTATGTAAGTAGAAATCATATTGATAAACATATATTCTCACATGCATGTGATGAATATATTCTTCTTTTGCATGCATTTGTTCAATACTATTATATATGAGACTTGTTTGTTGAAGAATTTGGCGAGATAGATGGAACCTAAACAAAGATATATTAAAATTACAAAATAAGTGGGGATTACAAATTTTTTAAAGAAAGTTTTTTTTTTTCATCGAGGGTGGTGGCTCTCCAAACAAAAAAAGAAAAGAAAAGAAAAGAAAGAAAATCACACTTGACTTCAAATCATTGGAGATGATCACCAGTCCAGTCCGAGTTGTCTTATTCTTCACCACTGATGTCCCTTCGTCAATAGGCCCTGCTTGCTGGTGGAGAGCCATTGACAGAAATAAGGAATACCTCTCAACACACTTGGTTGTGAATTCACCTCCTTGTCATCTAGAGATAAAGTGAGAGATGGGAGGGAGGACTCCATGTCCGGGCTTTCAGTCCTCTAATGTGTGACAACTGTATACGGAGATATGTCCATGGAGGATTCCAGTGTGGTTGCAGGTGTGAACATATGCTTGTTCAATTTATAAGGATAATTAACGTATATATTGTTTATGTTTCCCTTTGGATTACCGGTTCATCGAACCCAAATGATAAGTCAGTACGTTGGAGTGTCCATATGCG

mRNA sequence

CGCGGAACGAGTATCGATTCATTTCTTAAATTGAAGGGCTTCAATTGGCATAATCTCCACGTATTTCGCCTTCAGAAATTTTGCATCTATAAAACCCTATTTGATATCCCAGTTCCTCTCAGCAACTTCCTCCGTTTTCTTCCCAAAACTGACTCTCTCTTCTTTTTCTTTCGGAAAAGCAATCAATAGAAATGGCAGCAGCTAGGACCGCCGCTAGAATCTTTTCCCGAAGGTTTTCGAGCAGCGGTAAGATACTCAGCGAGGAAGAAAAGGCTGCTGAGAATATCTACATCAAGAAAACTGAACAAGAAAAACTGGAGAAGCTTGCACGCAAGGGACCTAAACCAGAAGAAAAGCTAGGAGGGTCAGTAGCTGATTCCGTTCCAAGCAGCTCAGCCTCAGCCTCGGCACCAGGAGCATCAACAGAGAAAATATCGACTGACAAACATCGCAATTATGCTGTTGTAGCTGGAACTGTAACTATTCTTGGTGCTCTCGGATGGTATCTCAAATCTAAAAAGAAGCCAGAAGAAGTCCATGATTGAGTTAACAGATGAAGTCATTTTCATATCACTAGCATCTGAAGCATGGGGAGGTGAGTTTTCTCCTTTCCTCTGCTAAATAAACCAAAAATCAAGATGCGTATGGATCTTGGTTAATGAATACATTATGTTCATATTGATGTTTCTCCTTGAAAATGGTTTTTTTGGCCTTATTTCTGTTTACTTTCATGGAAAATTAACCCTGAGACGTTGACAGCATAAAACATGTTCTGTGACAAAGACTTGGTTTATTGGATTTCATTTTCACATTCTCTTCAATGATATTGAGTAAATACTCTTTTTCTATCGTTTCTAAAAGAACAAAATAAGAAAAAAAAGAAGAATACTCCGTTTCCATTACTTTGTAAAAAGCTAATATGCATCGCCTAATCCATGCTCTAAAGCATAATGTTCAAACTTTTGAGTTTTTACAACCATAAGCATAACCTTTTTCTTTTTTAGCTTAAATGCTTAACGCATAATGGTCATAATTTCAGTGGATCACGGCGACAATGCCATTCTGATTAGACATAATTTTATAAACGAATTTGTTTTTTTTTTCCCTTTTTCCTTTTTTGGCTAAGGTGGGTTGGAATGAAGATTTCTTGGTGTATTTCATATTTTCAAAGTTGATTCAGCGGAGAAATAATTCTTGACATGATCATCGGTAATAGTTGAAATTATCTGTGATATTCTTACTTGACTATTCGCTCCAAGAAGAAATGATTTGTTGTGTTGTGATTACAGAGAAATAATGGCTACTAAAGGTGTGTAGACACTACCAATACCATTTACAATGATGTGGGGAAATTCTTACAACTATGCAAAGTACTTACTCCTAATGCATATGTTTAAATAGTTCGGTGTTTAAATAGTTTGGATTTAGGACTTGAGTAGATAATAAAATGTTTTTCAAAAGTTTTGTTGGAAATGTACTTGAATGTTTTTCAAAACTTATTTTGAGTGGTTGTTAAACACTTCAAATTTTTTTAAGATGTCATATTTTTAAAATTAAACGCTTAGATTCAAGTGGAATAAAACACATCTTAGGTCAATAAACACTCCTTGATTTACTTTCTTAAAAATTAAGCAACTTAATTTTTAAAAACTAAATAACTATGAAAATGAGTTTTTTTTTTTTTTTCATTTGCTTGAAAAAGGATGATGTTTTTTAGTTGAGAATTAAAAATTGTTTTTCAACTAGAAAATGAGAGTAAATAAGTTTAGTTCAACTAAATCGGAAATTGGTTTTAAGAAATTATTTTTTTCGAATACCATAGCTAACGTGAAATAGCTTATGGTCAACACTTGAATTGGTCGCAGCCTAGGGAGCTAACCTCCTTTGGGTTTGCTTTTTCAATTATGTTATGTTTACGGATGGTGAAACACATTATATGTAACATAATTTGAAAAATGGGATCTATTTTATTATGTTTGTTATTATCTACCAGTGTTTTGTATTTCTTTCGACAAGTGGAACCTAGTTGGAAAATTGTAATAAACTAATGTAATCTAAATGAAGTCAAAGGGATAATAAATCGAATTGTGTTTGAATATTGTATGAGTTCCACACGTCAGCCGTTACCAATGTATCGCTCTATTGTTTTTGATAACTGATATTGTTTATATATTCCTTAGGGTTATCGATCTATTAATTGATAACTGATATTGTTTATATATTCCTTAGGGTTATCGATCTATTAATTTATGTAAGTAGAAATCATATTGATAAACATATATTCTCACATGCATGTGATGAATATATTCTTCTTTTGCATGCATTTGTTCAATACTATTATATATGAGACTTGTTTGTTGAAGAATTTGGCGAGATAGATGGAACCTAAACAAAGATATATTAAAATTACAAAATAAGTGGGGATTACAAATTTTTTAAAGAAAGTTTTTTTTTTTCATCGAGGGTGGTGGCTCTCCAAACAAAAAAAGAAAAGAAAAGAAAAGAAAGAAAATCACACTTGACTTCAAATCATTGGAGATGATCACCAGTCCAGTCCGAGTTGTCTTATTCTTCACCACTGATGTCCCTTCGTCAATAGGCCCTGCTTGCTGGTGGAGAGCCATTGACAGAAATAAGGAATACCTCTCAACACACTTGGTTGTGAATTCACCTCCTTGTCATCTAGAGATAAAGTGAGAGATGGGAGGGAGGACTCCATGTCCGGGCTTTCAGTCCTCTAATGTGTGACAACTGTATACGGAGATATGTCCATGGAGGATTCCAGTGTGGTTGCAGGTGTGAACATATGCTTGTTCAATTTATAAGGATAATTAACGTATATATTGTTTATGTTTCCCTTTGGATTACCGGTTCATCGAACCCAAATGATAAGTCAGTACGTTGGAGTGTCCATATGCG

Coding sequence (CDS)

ATGGCAGCAGCTAGGACCGCCGCTAGAATCTTTTCCCGAAGGTTTTCGAGCAGCGGTAAGATACTCAGCGAGGAAGAAAAGGCTGCTGAGAATATCTACATCAAGAAAACTGAACAAGAAAAACTGGAGAAGCTTGCACGCAAGGGACCTAAACCAGAAGAAAAGCTAGGAGGGTCAGTAGCTGATTCCGTTCCAAGCAGCTCAGCCTCAGCCTCGGCACCAGGAGCATCAACAGAGAAAATATCGACTGACAAACATCGCAATTATGCTGTTGTAGCTGGAACTGTAACTATTCTTGGTGCTCTCGGATGGTATCTCAAATCTAAAAAGAAGCCAGAAGAAGTCCATGATTGA

Protein sequence

MAAARTAARIFSRRFSSSGKILSEEEKAAENIYIKKTEQEKLEKLARKGPKPEEKLGGSVADSVPSSSASASAPGASTEKISTDKHRNYAVVAGTVTILGALGWYLKSKKKPEEVHD

Homology

[Close]

BLAST of PI0008140.3 vs. ExPASy Swiss-Prot
Match: Q9ZUX4 (Uncharacterized protein At2g27730, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At2g27730 PE=1 SV=1)

HSP 1 Score: 110.5 bits (275), Expect = 1.3e-23
Identity = 69/113 (61.06%), Postives = 85/113 (75.22%), Query Frame = 0


Query: 3   AARTAARIFSRRFSSSGKILSEEEKAAENIYIKKTEQEKLEKLARKGPKPEEKLGGSVAD 62
           A R A RI SRRF SSGK+LSEEE+AAEN++IKK EQEKL+KLAR+G  P E+  GS A 
Sbjct: 2   ATRNALRIVSRRF-SSGKVLSEEERAAENVFIKKMEQEKLQKLARQG--PGEQAAGS-AS 61

Query: 63  SVPSSSASASAPGASTEKISTDKHRNYAVVAGTVTILGALGWYLKS--KKKPE 114
               + A+ASA   S  K+S DK+RNYAVVAG V I+G++GWYLK+  KK+PE
Sbjct: 62  EAKVAGATASASAESGPKVSEDKNRNYAVVAGVVAIVGSIGWYLKAGGKKQPE 110

[Close]

BLAST of PI0008140.3 vs. ExPASy TrEMBL
Match: A0A6J1CMV3 (uncharacterized protein At2g27730, mitochondrial OS=Momordica charantia OX=3673 GN=LOC111012716 PE=4 SV=1)

HSP 1 Score: 198.0 bits (502), Expect = 2.2e-47
Identity = 107/117 (91.45%), Postives = 110/117 (94.02%), Query Frame = 0


Query: 1   MAAARTAARIFSRRFSSSGKILSEEEKAAENIYIKKTEQEKLEKLARKGPKPEEKLGGSV 60
           MAAARTAARI SRRFSSSGKILSEEEKAAEN+YIKKTEQEKLEKLARKGPKPEEK GGS 
Sbjct: 1   MAAARTAARIVSRRFSSSGKILSEEEKAAENVYIKKTEQEKLEKLARKGPKPEEKPGGSA 60

Query: 61  ADSVPSSSASASAPGASTEKISTDKHRNYAVVAGTVTILGALGWYLKSKKKPEEVHD 118
           ADS+PS SASASA GAS EKISTDKHRNYAVVAGTVTILGA+GWYLKSKKKPEEV D
Sbjct: 61  ADSIPSGSASASASGASAEKISTDKHRNYAVVAGTVTILGAVGWYLKSKKKPEEVQD 117

[Close]

BLAST of PI0008140.3 vs. ExPASy TrEMBL
Match: A0A5A7T219 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold455G002960 PE=4 SV=1)

HSP 1 Score: 197.2 bits (500), Expect = 3.8e-47
Identity = 111/125 (88.80%), Postives = 114/125 (91.20%), Query Frame = 0


Query: 1   MAAARTAARIFSRRFSSSGKILSEEEKAAENIYIKKTEQEKLEKLARKGPKPEEKLGGSV 60
           MAAARTAARIFSRRFSSSGKILSEEEKAAEN+YIKKTEQEKLEKLARKGPKPEEK+G SV
Sbjct: 1   MAAARTAARIFSRRFSSSGKILSEEEKAAENVYIKKTEQEKLEKLARKGPKPEEKIGESV 60

Query: 61  ADSVPSS--------SASASAPGASTEKISTDKHRNYAVVAGTVTILGALGWYLKSKKKP 118
           ADSVPSS        SASASA GAS+EKISTDK RNYAVVAGTVTILGALGWYLKSKKKP
Sbjct: 61  ADSVPSSSASGSSSASASASASGASSEKISTDKQRNYAVVAGTVTILGALGWYLKSKKKP 120

[Close]

BLAST of PI0008140.3 vs. ExPASy TrEMBL
Match: A0A1S3CEE3 (uncharacterized protein At2g27730, mitochondrial OS=Cucumis melo OX=3656 GN=LOC103499925 PE=4 SV=1)

HSP 1 Score: 197.2 bits (500), Expect = 3.8e-47
Identity = 111/125 (88.80%), Postives = 114/125 (91.20%), Query Frame = 0


Query: 1   MAAARTAARIFSRRFSSSGKILSEEEKAAENIYIKKTEQEKLEKLARKGPKPEEKLGGSV 60
           MAAARTAARIFSRRFSSSGKILSEEEKAAEN+YIKKTEQEKLEKLARKGPKPEEK+G SV
Sbjct: 1   MAAARTAARIFSRRFSSSGKILSEEEKAAENVYIKKTEQEKLEKLARKGPKPEEKIGESV 60

Query: 61  ADSVPSS--------SASASAPGASTEKISTDKHRNYAVVAGTVTILGALGWYLKSKKKP 118
           ADSVPSS        SASASA GAS+EKISTDK RNYAVVAGTVTILGALGWYLKSKKKP
Sbjct: 61  ADSVPSSSASGSSSASASASASGASSEKISTDKQRNYAVVAGTVTILGALGWYLKSKKKP 120

[Close]

BLAST of PI0008140.3 vs. ExPASy TrEMBL
Match: A0A0A0LT33 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G165210 PE=4 SV=1)

HSP 1 Score: 196.1 bits (497), Expect = 8.5e-47
Identity = 106/117 (90.60%), Postives = 112/117 (95.73%), Query Frame = 0


Query: 1   MAAARTAARIFSRRFSSSGKILSEEEKAAENIYIKKTEQEKLEKLARKGPKPEEKLGGSV 60
           MAAARTAARIFSRRFSS GKILSEEEKAAENIYIKKTEQEKLEKLARKGPKPEEKLG SV
Sbjct: 1   MAAARTAARIFSRRFSSGGKILSEEEKAAENIYIKKTEQEKLEKLARKGPKPEEKLGESV 60

Query: 61  ADSVPSSSASASAPGASTEKISTDKHRNYAVVAGTVTILGALGWYLKSKKKPEEVHD 118
           ADSVPSSS+++++  +STEKISTDK RNYAVVAGTVTILGALGWYLKSKKKPEEVHD
Sbjct: 61  ADSVPSSSSASASGASSTEKISTDKQRNYAVVAGTVTILGALGWYLKSKKKPEEVHD 117

[Close]

BLAST of PI0008140.3 vs. ExPASy TrEMBL
Match: A0A6J1HVU8 (uncharacterized protein At2g27730, mitochondrial OS=Cucurbita maxima OX=3661 GN=LOC111466619 PE=4 SV=1)

HSP 1 Score: 188.0 bits (476), Expect = 2.3e-44
Identity = 105/117 (89.74%), Postives = 109/117 (93.16%), Query Frame = 0


Query: 1   MAAARTAARIFSRRFSSSGKILSEEEKAAENIYIKKTEQEKLEKLARKGPKPEEKLGGSV 60
           MAAARTAARIFSRRFS SGKILSEEEKAAENIYIKKTEQEKLEKLARKGPKPEEK   SV
Sbjct: 1   MAAARTAARIFSRRFSGSGKILSEEEKAAENIYIKKTEQEKLEKLARKGPKPEEKPVESV 60

Query: 61  ADSVPSSSASASAPGASTEKISTDKHRNYAVVAGTVTILGALGWYLKSKKKPEEVHD 118
           A+S+PS SAS SA GASTEKIS+DK+RNYAVVAGTVTI GALGWYLKSKKKPEEVHD
Sbjct: 61  AESIPSGSAS-SASGASTEKISSDKYRNYAVVAGTVTIFGALGWYLKSKKKPEEVHD 116

[Close]

BLAST of PI0008140.3 vs. NCBI nr
Match: XP_022142661.1 (uncharacterized protein At2g27730, mitochondrial [Momordica charantia] >XP_022142662.1 uncharacterized protein At2g27730, mitochondrial [Momordica charantia])

HSP 1 Score: 198.0 bits (502), Expect = 4.6e-47
Identity = 107/117 (91.45%), Postives = 110/117 (94.02%), Query Frame = 0


Query: 1   MAAARTAARIFSRRFSSSGKILSEEEKAAENIYIKKTEQEKLEKLARKGPKPEEKLGGSV 60
           MAAARTAARI SRRFSSSGKILSEEEKAAEN+YIKKTEQEKLEKLARKGPKPEEK GGS 
Sbjct: 1   MAAARTAARIVSRRFSSSGKILSEEEKAAENVYIKKTEQEKLEKLARKGPKPEEKPGGSA 60

Query: 61  ADSVPSSSASASAPGASTEKISTDKHRNYAVVAGTVTILGALGWYLKSKKKPEEVHD 118
           ADS+PS SASASA GAS EKISTDKHRNYAVVAGTVTILGA+GWYLKSKKKPEEV D
Sbjct: 61  ADSIPSGSASASASGASAEKISTDKHRNYAVVAGTVTILGAVGWYLKSKKKPEEVQD 117

[Close]

BLAST of PI0008140.3 vs. NCBI nr
Match: XP_008461298.1 (PREDICTED: uncharacterized protein At2g27730, mitochondrial [Cucumis melo] >KAA0035485.1 uncharacterized protein E6C27_scaffold285G001350 [Cucumis melo var. makuwa] >TYK31040.1 uncharacterized protein E5676_scaffold455G002960 [Cucumis melo var. makuwa])

HSP 1 Score: 197.2 bits (500), Expect = 7.8e-47
Identity = 111/125 (88.80%), Postives = 114/125 (91.20%), Query Frame = 0


Query: 1   MAAARTAARIFSRRFSSSGKILSEEEKAAENIYIKKTEQEKLEKLARKGPKPEEKLGGSV 60
           MAAARTAARIFSRRFSSSGKILSEEEKAAEN+YIKKTEQEKLEKLARKGPKPEEK+G SV
Sbjct: 1   MAAARTAARIFSRRFSSSGKILSEEEKAAENVYIKKTEQEKLEKLARKGPKPEEKIGESV 60

Query: 61  ADSVPSS--------SASASAPGASTEKISTDKHRNYAVVAGTVTILGALGWYLKSKKKP 118
           ADSVPSS        SASASA GAS+EKISTDK RNYAVVAGTVTILGALGWYLKSKKKP
Sbjct: 61  ADSVPSSSASGSSSASASASASGASSEKISTDKQRNYAVVAGTVTILGALGWYLKSKKKP 120

[Close]

BLAST of PI0008140.3 vs. NCBI nr
Match: XP_038893784.1 (uncharacterized protein At2g27730, mitochondrial-like [Benincasa hispida] >XP_038893785.1 uncharacterized protein At2g27730, mitochondrial-like [Benincasa hispida])

HSP 1 Score: 197.2 bits (500), Expect = 7.8e-47
Identity = 108/117 (92.31%), Postives = 111/117 (94.87%), Query Frame = 0


Query: 1   MAAARTAARIFSRRFSSSGKILSEEEKAAENIYIKKTEQEKLEKLARKGPKPEEKLGGSV 60
           MAAARTAARIFSRRFSSSGKILSEEEKAAEN+YIKKTEQEKLEKLARKGPKPEEK GGSV
Sbjct: 1   MAAARTAARIFSRRFSSSGKILSEEEKAAENVYIKKTEQEKLEKLARKGPKPEEKAGGSV 60

Query: 61  ADSVPSSSASASAPGASTEKISTDKHRNYAVVAGTVTILGALGWYLKSKKKPEEVHD 118
            DS+PS SASAS  GASTEKIS+DKHRNYAVVAGTVTILGALGWYLKSKKKPEEV D
Sbjct: 61  TDSIPSGSASAS--GASTEKISSDKHRNYAVVAGTVTILGALGWYLKSKKKPEEVRD 115

[Close]

BLAST of PI0008140.3 vs. NCBI nr
Match: XP_004139491.1 (uncharacterized protein At2g27730, mitochondrial [Cucumis sativus] >KGN64938.1 hypothetical protein Csa_022688 [Cucumis sativus])

HSP 1 Score: 196.1 bits (497), Expect = 1.7e-46
Identity = 106/117 (90.60%), Postives = 112/117 (95.73%), Query Frame = 0


Query: 1   MAAARTAARIFSRRFSSSGKILSEEEKAAENIYIKKTEQEKLEKLARKGPKPEEKLGGSV 60
           MAAARTAARIFSRRFSS GKILSEEEKAAENIYIKKTEQEKLEKLARKGPKPEEKLG SV
Sbjct: 1   MAAARTAARIFSRRFSSGGKILSEEEKAAENIYIKKTEQEKLEKLARKGPKPEEKLGESV 60

Query: 61  ADSVPSSSASASAPGASTEKISTDKHRNYAVVAGTVTILGALGWYLKSKKKPEEVHD 118
           ADSVPSSS+++++  +STEKISTDK RNYAVVAGTVTILGALGWYLKSKKKPEEVHD
Sbjct: 61  ADSVPSSSSASASGASSTEKISTDKQRNYAVVAGTVTILGALGWYLKSKKKPEEVHD 117

[Close]

BLAST of PI0008140.3 vs. NCBI nr
Match: XP_038895664.1 (uncharacterized protein At2g27730, mitochondrial-like [Benincasa hispida])

HSP 1 Score: 194.9 bits (494), Expect = 3.9e-46
Identity = 108/117 (92.31%), Postives = 111/117 (94.87%), Query Frame = 0


Query: 1   MAAARTAARIFSRRFSSSGKILSEEEKAAENIYIKKTEQEKLEKLARKGPKPEEKLGGSV 60
           MAAARTAARIFSRRFSSSGKILSEEEKAAEN+YIKK EQEKLEKLARKGPKPEEKL GSV
Sbjct: 1   MAAARTAARIFSRRFSSSGKILSEEEKAAENVYIKKIEQEKLEKLARKGPKPEEKLEGSV 60

Query: 61  ADSVPSSSASASAPGASTEKISTDKHRNYAVVAGTVTILGALGWYLKSKKKPEEVHD 118
           A SVPS SASA + GASTEKIS+DKHRNYAVVAGTVTILGALGWYLKSKKKPEEVHD
Sbjct: 61  AGSVPSGSASAPS-GASTEKISSDKHRNYAVVAGTVTILGALGWYLKSKKKPEEVHD 116

[Close]

BLAST of PI0008140.3 vs. TAIR 10
Match: AT2G27730.1 (copper ion binding )

HSP 1 Score: 110.5 bits (275), Expect = 9.0e-25
Identity = 69/113 (61.06%), Postives = 85/113 (75.22%), Query Frame = 0


Query: 3   AARTAARIFSRRFSSSGKILSEEEKAAENIYIKKTEQEKLEKLARKGPKPEEKLGGSVAD 62
           A R A RI SRRF SSGK+LSEEE+AAEN++IKK EQEKL+KLAR+G  P E+  GS A 
Sbjct: 2   ATRNALRIVSRRF-SSGKVLSEEERAAENVFIKKMEQEKLQKLARQG--PGEQAAGS-AS 61

Query: 63  SVPSSSASASAPGASTEKISTDKHRNYAVVAGTVTILGALGWYLKS--KKKPE 114
               + A+ASA   S  K+S DK+RNYAVVAG V I+G++GWYLK+  KK+PE
Sbjct: 62  EAKVAGATASASAESGPKVSEDKNRNYAVVAGVVAIVGSIGWYLKAGGKKQPE 110

The following BLAST results are available for this feature:

BLAST of PI0008140.3 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9ZUX4	1.3e-23	61.06	Uncharacterized protein At2g27730, mitochondrial OS=Arabidopsis thaliana OX=3702...	[more]

BLAST of PI0008140.3 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1CMV3	2.2e-47	91.45	uncharacterized protein At2g27730, mitochondrial OS=Momordica charantia OX=3673 ...	[more]
A0A5A7T219	3.8e-47	88.80	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A1S3CEE3	3.8e-47	88.80	uncharacterized protein At2g27730, mitochondrial OS=Cucumis melo OX=3656 GN=LOC1...	[more]
A0A0A0LT33	8.5e-47	90.60	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G165210 PE=4 SV=1	[more]
A0A6J1HVU8	2.3e-44	89.74	uncharacterized protein At2g27730, mitochondrial OS=Cucurbita maxima OX=3661 GN=...	[more]

BLAST of PI0008140.3 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022142661.1	4.6e-47	91.45	uncharacterized protein At2g27730, mitochondrial [Momordica charantia] >XP_02214...	[more]
XP_008461298.1	7.8e-47	88.80	PREDICTED: uncharacterized protein At2g27730, mitochondrial [Cucumis melo] >KAA0...	[more]
XP_038893784.1	7.8e-47	92.31	uncharacterized protein At2g27730, mitochondrial-like [Benincasa hispida] >XP_03...	[more]
XP_004139491.1	1.7e-46	90.60	uncharacterized protein At2g27730, mitochondrial [Cucumis sativus] >KGN64938.1 h...	[more]
XP_038895664.1	3.9e-46	92.31	uncharacterized protein At2g27730, mitochondrial-like [Benincasa hispida]	[more]

BLAST of PI0008140.3 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G27730.1	9.0e-25	61.06	copper ion binding	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 61..79
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 43..84
None	No IPR available	PANTHER	PTHR33878	OS08G0559000 PROTEIN	coord: 2..117
None	No IPR available	PANTHER	PTHR33878:SF1	OS08G0559000 PROTEIN	coord: 2..117

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
PI0008140	PI0008140	gene

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
PI0008140.3-five_prime_utr	PI0008140.3-five_prime_utr-chr12:17279435..17279607	five_prime_UTR
PI0008140.3-five_prime_utr	PI0008140.3-five_prime_utr-chr12:17279702..17279719	five_prime_UTR

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
PI0008140.3-exon	PI0008140.3-exon-chr12:17279435..17279607	exon
PI0008140.3-exon	PI0008140.3-exon-chr12:17279702..17279824	exon
PI0008140.3-exon	PI0008140.3-exon-chr12:17281258..17281296	exon
PI0008140.3-exon	PI0008140.3-exon-chr12:17281870..17284453	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
PI0008140.3-cds	PI0008140.3-cds-chr12:17279720..17279824	CDS
PI0008140.3-cds	PI0008140.3-cds-chr12:17281258..17281296	CDS
PI0008140.3-cds	PI0008140.3-cds-chr12:17281870..17282079	CDS

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
PI0008140.3-three_prime_utr	PI0008140.3-three_prime_utr-chr12:17282080..17284453	three_prime_UTR

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
PI0008140.3	PI0008140.3-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005747	mitochondrial respiratory chain complex I