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PI0003913.1 (mRNA) Melon (PI 482460) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATTTATAATTTAACCTAATTTGTAAGGAAGTCTAGGAAGCCTAAGCTTGCAATTTAGGTTAACTTAGTGAAGAAAGAGAGAAGGGAAGCGTAAATAATGTTCCTTCCATTCGGAAACCCAGAAACACAATCAGCAGGAAATTAAGGCCACAAACAAGACAACTGTTAGTACCACATTTCACTCATCCCTTTCTTCATCTCCAAGAAACAAAATGAAACTAAACAAATCCCTGAGGATAGAGATAGATGTCATATGAGGATGGCAATGTCAGAATTGCTTCTGCAAATCCAGAAAGCCATTCCTTTCTCCACTCCCTCTCCCATCGTTTTCCCCATATATAAATTCTTCCCACATTCGGATTCCCTTTCCCAAATCATTTCTCTAACTAACAAAAGTAATCACCAACTTCTACCATTTCCAAACATTGTTCGTCTTACCCATGTCTTTGACCCCACCCCAATACACAACCAACAACCGCCATACCACAACCTTCCAGCTCTACTGGTGCCACCAATGCCACCGCACCATTACCCTCGCCTCAGCACACACGTCGGAGCTCACCTGCCCACGCTGTTTTGGGCAGTTCATTGAAGAGGTTCAACTCACCCTCCCTGAATTTAATCCCTCGCCAGAGGCTCGTTTATTTGAAGCCCTCTCACTAATTCTCAACCAGCCAATTCGTCTCTTCAATAACGGAACCCCAAATGGGAACCGCCACCATCCACCATTACACAGGTTTGACGAATCTGATCGGAGATCGTTTAGTGATCCTGAAGGAGATGAATTGCCTCAATGGCGAAGACGATGGCGCAATCGAAGTCTGGATGAGAGGGACAACTTTGGCCAACTACCTCCAAATCCAAACCGCTCTCGTACTGTCATCGTTTTTGGTCCCCCTGACCAACTTCAGCCAATCCAGCCGGTATTACCACGGAGGGTCAATCCAAGAGACTACTTCACTGGACCACAACTGGATGAGTTAATTGAAGAGCTGACGCAGAACGACCGACCAGGACCAGCACCGGCAAGCGAGGAGGCAATCGAGAGGATTCCAACGGTGAAAATAGCAGCAGAGCATCTGAAGAACGACTCACACTGCCCAGTTTGTAAGGAGGAGTTTGAAGTGGGGGAGAAGCAAGGGAGTTGAGTTGTAAGCATATATACCATTCAGAGTGCATAGTGCCATGGCTTCGGCTTCATAACTCTTGCCCTGTTTGTAGGCAAGAGATGCCGTTGTTGACACCAGAGAATCAAGCGTCGAGTAGTTCTGAAGAGGAAGGGATGGGGAGAAGATGTGCCAGGTGGTGGAGTCAGTTGGTGCCTTGGCCATTTCGGAATAGGTATAGGCAGATTAGTCCATTTCCACGGAACCGCTTCGATGCTTCCTCTCGAGGTGATGCATAATCTGTTTCTTCTACTCTTCAAAATAGTGGAATGTCTCCAGTATAGGGATATTGATATACGATTAAATAAAATTTGTATGAGCATAATTAAAGATGCACATACAATAATTAGGGATCTATTGCTGTTGATCTTACATTCGTTATGTCTCTAATGGGAGATAAAATCACGCCTAAAATTATTTTCCTTTTCAAGCCATTCCCCTTCATCCCATATTATTCTAAATCTTCCGCGAAAGAAATCAATTCGCAGACTTTCTACGGGGAAAAAACAATTTTACAAATAAAAAATTATTTAAAAGGCTAATGCATAAAATTTAAAAGTAATAAATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATAAGTTTGACGAATTCTACTAAATTGAAAATAAAAGCATAAAAAGTAAACAAAGAAAAATGGTTCTATTATTCCCATCACAGATTCTGACTCAGATATTTTATTCCATTTTCCAGAAATTAATTCAAGG ATTTATAATTTAACCTAATTTGTAAGGAAGTCTAGGAAGCCTAAGCTTGCAATTTAGGTTAACTTAGTGAAGAAAGAGAGAAGGGAAGCGTAAATAATGTTCCTTCCATTCGGAAACCCAGAAACACAATCAGCAGGAAATTAAGGCCACAAACAAGACAACTGTTAGTACCACATTTCACTCATCCCTTTCTTCATCTCCAAGAAACAAAATGAAACTAAACAAATCCCTGAGGATAGAGATAGATGTCATATGAGGATGGCAATGTCAGAATTGCTTCTGCAAATCCAGAAAGCCATTCCTTTCTCCACTCCCTCTCCCATCGTTTTCCCCATATATAAATTCTTCCCACATTCGGATTCCCTTTCCCAAATCATTTCTCTAACTAACAAAAGTAATCACCAACTTCTACCATTTCCAAACATTGTTCGTCTTACCCATGTCTTTGACCCCACCCCAATACACAACCAACAACCGCCATACCACAACCTTCCAGCTCTACTGGTGCCACCAATGCCACCGCACCATTACCCTCGCCTCAGCACACACGTCGGAGCTCACCTGCCCACGCTGTTTTGGGCAGTTCATTGAAGAGGTTCAACTCACCCTCCCTGAATTTAATCCCTCGCCAGAGGCTCGTTTATTTGAAGCCCTCTCACTAATTCTCAACCAGCCAATTCGTCTCTTCAATAACGGAACCCCAAATGGGAACCGCCACCATCCACCATTACACAGGTTTGACGAATCTGATCGGAGATCGTTTAGTGATCCTGAAGGAGATGAATTGCCTCAATGGCGAAGACGATGGCGCAATCGAAGTCTGGATGAGAGGGACAACTTTGGCCAACTACCTCCAAATCCAAACCGCTCTCGTACTGTCATCGTTTTTGGTCCCCCTGACCAACTTCAGCCAATCCAGCCGGTATTACCACGGAGGGTCAATCCAAGAGACTACTTCACTGGACCACAACTGGATGAGTTAATTGAAGAGCTGACGCAGAACGACCGACCAGGACCAGCACCGGCAAGCGAGGAGGCAATCGAGAGGATTCCAACGGTGAAAATAGCAGCAGAGCATCTGAAGAACGACTCACACTGCCCAGTTTGTAAGGAGGAGTTTGAAGTGGGGGAGAAGCAAGGGAGTTGAGTTGTAAGCATATATACCATTCAGAGTGCATAGTGCCATGGCTTCGGCTTCATAACTCTTGCCCTGTTTGTAGGCAAGAGATGCCGTTGTTGACACCAGAGAATCAAGCGTCGAGTAGTTCTGAAGAGGAAGGGATGGGGAGAAGATGTGCCAGGTGGTGGAGTCAGTTGGTGCCTTGGCCATTTCGGAATAGGTATAGGCAGATTAGTCCATTTCCACGGAACCGCTTCGATGCTTCCTCTCGAGAAATTAATTCAAGG ATGTCTTTGACCCCACCCCAATACACAACCAACAACCGCCATACCACAACCTTCCAGCTCTACTGGTGCCACCAATGCCACCGCACCATTACCCTCGCCTCAGCACACACGTCGGAGCTCACCTGCCCACGCTGTTTTGGGCAGTTCATTGAAGAGGTTCAACTCACCCTCCCTGAATTTAATCCCTCGCCAGAGGCTCGTTTATTTGAAGCCCTCTCACTAATTCTCAACCAGCCAATTCGTCTCTTCAATAACGGAACCCCAAATGGGAACCGCCACCATCCACCATTACACAGGTTTGACGAATCTGATCGGAGATCGTTTAGTGATCCTGAAGGAGATGAATTGCCTCAATGGCGAAGACGATGGCGCAATCGAAGTCTGGATGAGAGGGACAACTTTGGCCAACTACCTCCAAATCCAAACCGCTCTCGTACTGTCATCGTTTTTGGTCCCCCTGACCAACTTCAGCCAATCCAGCCGGTATTACCACGGAGGGTCAATCCAAGAGACTACTTCACTGGACCACAACTGGATGAGTTAATTGAAGAGCTGACGCAGAACGACCGACCAGGACCAGCACCGGCAAGCGAGGAGGCAATCGAGAGGATTCCAACGGTGAAAATAGCAGCAGAGCATCTGAAGAACGACTCACACTGCCCAGTTTGTAAGGAGGAGTTTGAAGTGGGGGAGAAGCAAGGGAGTTGA MSLTPPQYTTNNRHTTTFQLYWCHQCHRTITLASAHTSELTCPRCFGQFIEEVQLTLPEFNPSPEARLFEALSLILNQPIRLFNNGTPNGNRHHPPLHRFDESDRRSFSDPEGDELPQWRRRWRNRSLDERDNFGQLPPNPNRSRTVIVFGPPDQLQPIQPVLPRRVNPRDYFTGPQLDELIEELTQNDRPGPAPASEEAIERIPTVKIAAEHLKNDSHCPVCKEEFEVGEKQGS Homology
BLAST of PI0003913.1 vs. ExPASy Swiss-Prot
Match: Q94AK4 (E3 ubiquitin-protein ligase RZF1 OS=Arabidopsis thaliana OX=3702 GN=RZF1 PE=1 SV=1) HSP 1 Score: 79.3 bits (194), Expect = 6.3e-14 Identity = 65/222 (29.28%), Postives = 95/222 (42.79%), Query Frame = 0
BLAST of PI0003913.1 vs. ExPASy Swiss-Prot
Match: O22197 (Probable E3 ubiquitin-protein ligase RHC1A OS=Arabidopsis thaliana OX=3702 GN=RHC1A PE=2 SV=1) HSP 1 Score: 77.0 bits (188), Expect = 3.1e-13 Identity = 70/230 (30.43%), Postives = 101/230 (43.91%), Query Frame = 0
BLAST of PI0003913.1 vs. ExPASy Swiss-Prot
Match: Q8LPN7 (E3 ubiquitin-protein ligase RING1-like OS=Arabidopsis thaliana OX=3702 GN=At3g19950 PE=1 SV=1) HSP 1 Score: 77.0 bits (188), Expect = 3.1e-13 Identity = 67/225 (29.78%), Postives = 105/225 (46.67%), Query Frame = 0
BLAST of PI0003913.1 vs. ExPASy Swiss-Prot
Match: Q7T0Q3 (E3 ubiquitin-protein ligase RNF126-A OS=Xenopus laevis OX=8355 GN=rnf126-a PE=2 SV=1) HSP 1 Score: 63.5 bits (153), Expect = 3.6e-09 Identity = 68/256 (26.56%), Postives = 97/256 (37.89%), Query Frame = 0
BLAST of PI0003913.1 vs. ExPASy Swiss-Prot
Match: Q6IRP0 (E3 ubiquitin-protein ligase RNF126-B OS=Xenopus laevis OX=8355 GN=rnf126-b PE=2 SV=1) HSP 1 Score: 61.6 bits (148), Expect = 1.4e-08 Identity = 67/237 (28.27%), Postives = 90/237 (37.97%), Query Frame = 0
BLAST of PI0003913.1 vs. ExPASy TrEMBL
Match: A0A5A7TUM6 (RING-type E3 ubiquitin transferase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1493G00540 PE=4 SV=1) HSP 1 Score: 456.1 bits (1172), Expect = 9.1e-125 Identity = 215/230 (93.48%), Postives = 222/230 (96.52%), Query Frame = 0
BLAST of PI0003913.1 vs. ExPASy TrEMBL
Match: A0A0A0L0L2 (RING-type E3 ubiquitin transferase OS=Cucumis sativus OX=3659 GN=Csa_4G370570 PE=4 SV=1) HSP 1 Score: 456.1 bits (1172), Expect = 9.1e-125 Identity = 213/230 (92.61%), Postives = 222/230 (96.52%), Query Frame = 0
BLAST of PI0003913.1 vs. ExPASy TrEMBL
Match: A0A1S3B9M6 (RING-type E3 ubiquitin transferase OS=Cucumis melo OX=3656 GN=LOC103487574 PE=4 SV=1) HSP 1 Score: 456.1 bits (1172), Expect = 9.1e-125 Identity = 215/230 (93.48%), Postives = 222/230 (96.52%), Query Frame = 0
BLAST of PI0003913.1 vs. ExPASy TrEMBL
Match: A0A1S4DVY7 (RING-type E3 ubiquitin transferase OS=Cucumis melo OX=3656 GN=LOC103487574 PE=4 SV=1) HSP 1 Score: 456.1 bits (1172), Expect = 9.1e-125 Identity = 215/230 (93.48%), Postives = 222/230 (96.52%), Query Frame = 0
BLAST of PI0003913.1 vs. ExPASy TrEMBL
Match: A0A6J1IKH7 (RING-type E3 ubiquitin transferase OS=Cucurbita maxima OX=3661 GN=LOC111476446 PE=4 SV=1) HSP 1 Score: 374.0 bits (959), Expect = 4.6e-100 Identity = 177/231 (76.62%), Postives = 198/231 (85.71%), Query Frame = 0
BLAST of PI0003913.1 vs. NCBI nr
Match: XP_008444136.1 (PREDICTED: E3 ubiquitin-protein ligase RING1 isoform X2 [Cucumis melo]) HSP 1 Score: 456.1 bits (1172), Expect = 1.9e-124 Identity = 215/230 (93.48%), Postives = 222/230 (96.52%), Query Frame = 0
BLAST of PI0003913.1 vs. NCBI nr
Match: KAA0045221.1 (E3 ubiquitin-protein ligase RING1 isoform X2 [Cucumis melo var. makuwa] >TYK19249.1 E3 ubiquitin-protein ligase RING1 isoform X2 [Cucumis melo var. makuwa]) HSP 1 Score: 456.1 bits (1172), Expect = 1.9e-124 Identity = 215/230 (93.48%), Postives = 222/230 (96.52%), Query Frame = 0
BLAST of PI0003913.1 vs. NCBI nr
Match: XP_016899875.1 (PREDICTED: E3 ubiquitin-protein ligase RING1-like isoform X1 [Cucumis melo]) HSP 1 Score: 456.1 bits (1172), Expect = 1.9e-124 Identity = 215/230 (93.48%), Postives = 222/230 (96.52%), Query Frame = 0
BLAST of PI0003913.1 vs. NCBI nr
Match: XP_004142693.2 (E3 ubiquitin-protein ligase RZF1 [Cucumis sativus]) HSP 1 Score: 456.1 bits (1172), Expect = 1.9e-124 Identity = 213/230 (92.61%), Postives = 222/230 (96.52%), Query Frame = 0
BLAST of PI0003913.1 vs. NCBI nr
Match: KGN54579.1 (hypothetical protein Csa_012041 [Cucumis sativus]) HSP 1 Score: 456.1 bits (1172), Expect = 1.9e-124 Identity = 213/230 (92.61%), Postives = 222/230 (96.52%), Query Frame = 0
BLAST of PI0003913.1 vs. TAIR 10
Match: AT1G60360.1 (RING/U-box superfamily protein ) HSP 1 Score: 151.0 bits (380), Expect = 1.2e-36 Identity = 102/252 (40.48%), Postives = 134/252 (53.17%), Query Frame = 0
BLAST of PI0003913.1 vs. TAIR 10
Match: AT3G56580.2 (RING/U-box superfamily protein ) HSP 1 Score: 79.3 bits (194), Expect = 4.5e-15 Identity = 65/222 (29.28%), Postives = 95/222 (42.79%), Query Frame = 0
BLAST of PI0003913.1 vs. TAIR 10
Match: AT3G56580.1 (RING/U-box superfamily protein ) HSP 1 Score: 79.3 bits (194), Expect = 4.5e-15 Identity = 65/222 (29.28%), Postives = 95/222 (42.79%), Query Frame = 0
BLAST of PI0003913.1 vs. TAIR 10
Match: AT3G56580.3 (RING/U-box superfamily protein ) HSP 1 Score: 79.3 bits (194), Expect = 4.5e-15 Identity = 65/222 (29.28%), Postives = 95/222 (42.79%), Query Frame = 0
BLAST of PI0003913.1 vs. TAIR 10
Match: AT2G40830.2 (RING-H2 finger C1A ) HSP 1 Score: 77.0 bits (188), Expect = 2.2e-14 Identity = 70/230 (30.43%), Postives = 101/230 (43.91%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25
Relationships
This mRNA is a part of the following gene feature(s):
The following five_prime_UTR feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
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