PI0003742.1 (mRNA) Melon (PI 482460) v1

Overview
NamePI0003742.1
TypemRNA
OrganismCucumis metuliferus (Melon (PI 482460) v1)
DescriptionUnknown protein
Locationchr08: 9148952 .. 9150988 (+)
Sequence length827
RNA-Seq ExpressionPI0003742.1
SyntenyPI0003742.1
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
CAGTGATGTACTTTTATCATTGTTTATCATTGATAGACAATGATAGTCTTCTATTAGCGTCTATCTTAGACAAAAAGAAATGAGAGAAGGTCAAAAATTAGAAATGAAAAAAAGGTAAATGTAGTTAATAATATATATTGAGTATGTATATTTACAACTAACTTAACTTTTGTTTTTCAAATTATTAGCTATAAGATACTTTCTTGCAGCCTAAAGAGGAAAAGCAAGATGATGAGGAAGATAGTGGAGAAAATGAGATGGAAAGAAAGCAAGAATGAAATATGAAAGAAAACAAACAATTGAAAATAAGGTAAATGGAAAACAGTTACTTTTCATAAATCTTGTAATATTTATATCACTAACATTCTTTCTTATCCTTATTTTAGGTATCTGAAGGAAAAGGGAAACACAAAAAATTTAAAGCAAAAGTATTAGTTGATGATGATTACCAAGCTTTGAATGAGAGGACAAAAAAAGAAAAACAAACAAACAAAACCAATGAAGAAAGCTCCTTAAAAAACAAGTCTTGGAATCAGCACTTAAGGGAACAAACTCTCTACTAATCCTAAAAGCAAGTAGGAGTGAATTATGCCTATCACTCTATGGCTTCAGGTAAAGTGACTCTTTCATGGTCTGGTCTTATGTAAACTCTTTTACATAGGATGTCTTCACTCGCATGTCTCTACATGAGCAATTTAAGATCACATTGCTTGTACTAAATACAAAGTGGGTTGCATCCATTGTGTCCCAAAATAAGGCACCTAACCTTATTCATATACTATAGACCATTTAGACTATTGCTAGAACTTGATCCACATTTATGTCTCTACATAAAGTTCAAGTACTAATACTATAGTCAAGGGAACCTTGTTTATTGGATTCTGAATCTATGACGAGCAAATCTCTTTTTTCAATAACAATTTGTTGAACAATACCTCAATGACAATTTTATTGAATAATAAAATAGTTTAACAGTCACAAATCACGAGTTTTAGGACATAAAATCCAACACGAATTAGTCCTATGGTGCACTCCTGATAACTCGTATAAATACAAGTTATTATAGCCTTTTAGGCCGAAAAATGTGGATTAAACGCGGAATAAATGGTCTAAACGCGTAGAATGTAGTGCAAATCTGTAATGATTTAAGAATGAGCTTCGCATAAGTCATATTGCGTGTTTAATTGTGTTTTAAGTGTTTTTGCACGCAGAAAGAAGGCGAAGAGAGGAATACTAGGCGATCAGTATTGCATTTAGGTGTTCAAAGGACCATCTGGCGAACAACCAACACATCACTATGCAATGCTGACGCACTAAGAGACAAGAATGGTAGTTGGAGATGATTTGACTACTCTAACATGCTTTTGGCGCGAGATGGGCTATGTACAGAAGGGCATTAAATGCTTCCCGCCAAAGCATACCTATAAATACTCCAACACCAATTTACAAAGAATGAAGAGGAGACCATCATTAGGATGGTCGGGGTAGAACACCTAGTAGAGTTCTCTCCATTTGCAGCTCCAATCATCCACTCTTTCTCCGATCAACAATCCGGCGAGAGCCAAAGAGAGAAGATTAGAGAGAGAATTCCCATATACTATCCCCTAACTTGTAAAAGAGCCAAAGAATGCAAGTAATTGCATTCTGCGGCTTGACTCATTCCTGTCTTATTCATTTTATATTAGTTGTGTTGTATAAATTATGTAATTCATGGCCGCAAGGCCTACATTCTTAATACAATGCATTTCATCCAATTCAGTCTACCATTTCTATGCTTTCACATTGCATGTTTTACATATTAAGTAATTGAAATGTATATCATATGTTTAGTAAGGAATTCCCTTATAATTATCATGATGCTTAGGCGAGCTAATTCGCTTGGCCAGCGTTCGTCGCCAACTACTCGAGAGCGTAAGTAGCAAGGACATAACTAAGCATGTGTGGAATGAAGTTGGAAACAAACTTCATTCTGGCGTTTTAACTCCGTCATTTACATTCCGAGAGGAAGTAAGTGTGGTGTCAGGCGCCGAGAGGTGA

mRNA sequence

CAGTGATGTACTTTTATCATTGTTTATCATTGATAGACAATGATAGTCTTCTATTAGCGTCTATCTTAGACAAAAAGAAATGAGAGAAGGTCAAAAATTAGAAATGAAAAAAAGGTAAATGTAGTTAATAATATATATTGAGTATGTATATTTACAACTAACTTAACTTTTGTTTTTCAAATTATTAGCTATAAGATACTTTCTTGCAGCCTAAAGAGGAAAAGCAAGATGATGAGGAAGATAGTGGAGAAAATGAGATGGAAAGAAAGCAAGAATGAAATATGAAAGAAAACAAACAATTGAAAATAAGGTATCTGAAGGAAAAGGGAAACACAAAAAATTTAAAGCAAAAGTATTAGTTGATGATGATTACCAAGCTTTGAATGAGAGGACAAAAAAAGAAAAACAAACAAACAAAACCAATGAAGAAAGCTCCTTAAAAAACAAGTCTTGGAATCAGCACTTAAGGGAACAAACTCTCTACTAATCCTAAAAGCAAGTAGGAGTGAATTATGCCTATCACTCTATGGCTTCAGAAAGAAGGCGAAGAGAGGAATACTAGGCGATCAGTATTGCATTTAGGTGTTCAAAGGACCATCTGGCGAACAACCAACACATCACTATGCAATGCTGACGCACTAAGAGACAAGAATGGCGAGCTAATTCGCTTGGCCAGCGTTCGTCGCCAACTACTCGAGAGCGTAAGTAGCAAGGACATAACTAAGCATGTGTGGAATGAAGTTGGAAACAAACTTCATTCTGGCGTTTTAACTCCGTCATTTACATTCCGAGAGGAAGTAAGTGTGGTGTCAGGCGCCGAGAGGTGA

Coding sequence (CDS)

ATGCCTATCACTCTATGGCTTCAGAAAGAAGGCGAAGAGAGGAATACTAGGCGATCAGTATTGCATTTAGGTGTTCAAAGGACCATCTGGCGAACAACCAACACATCACTATGCAATGCTGACGCACTAAGAGACAAGAATGGCGAGCTAATTCGCTTGGCCAGCGTTCGTCGCCAACTACTCGAGAGCGTAAGTAGCAAGGACATAACTAAGCATGTGTGGAATGAAGTTGGAAACAAACTTCATTCTGGCGTTTTAACTCCGTCATTTACATTCCGAGAGGAAGTAAGTGTGGTGTCAGGCGCCGAGAGGTGA

Protein sequence

MPITLWLQKEGEERNTRRSVLHLGVQRTIWRTTNTSLCNADALRDKNGELIRLASVRRQLLESVSSKDITKHVWNEVGNKLHSGVLTPSFTFREEVSVVSGAER
Homology
The following BLAST results are available for this feature:
BLAST of PI0003742.1 vs.
Match NameE-valueIdentityDescription
BLAST of PI0003742.1 vs.
Match NameE-valueIdentityDescription
BLAST of PI0003742.1 vs.
Match NameE-valueIdentityDescription
BLAST of PI0003742.1 vs.
Match NameE-valueIdentityDescription
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
PI0003742PI0003742gene


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameType
PI0003742.1-five_prime_utrPI0003742.1-five_prime_utr-chr08:9148952..9149261five_prime_UTR
PI0003742.1-five_prime_utrPI0003742.1-five_prime_utr-chr08:9149338..9149539five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameType
PI0003742.1-exonPI0003742.1-exon-chr08:9148952..9149261exon
PI0003742.1-exonPI0003742.1-exon-chr08:9149338..9149563exon
PI0003742.1-exonPI0003742.1-exon-chr08:9150163..9150280exon
PI0003742.1-exonPI0003742.1-exon-chr08:9150816..9150988exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
PI0003742.1-cdsPI0003742.1-cds-chr08:9149540..9149563CDS
PI0003742.1-cdsPI0003742.1-cds-chr08:9150163..9150280CDS
PI0003742.1-cdsPI0003742.1-cds-chr08:9150816..9150988CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
PI0003742.1PI0003742.1-proteinpolypeptide