Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TTCAAAGCCACACAGCCTCACACGAAACCTCCAACCCTTCATTCCAAAAAAATCACACCAAGCAGAAATGGCTCCAATTCCTCAAGCTTCTTCAATCAATCGCCAATGGCTTCTCTTCTATCACTCTATCTTTCCTCCTCCTTCCCATCCCCTCTTCGACCTCACCGCACTTTGAACTTCATTTCCCGCCATGGATCCACCCTCCCAAGCTCTCCAAGAACCACAAACAGTCGAAGAATAACCACAATATCACTCTCCTTTCGGACCTCCTACCGATTCACCGCCGATCATGAAGACGAAGGCGAGAAAATCACCGGAGATTTCGGCTTCGATGAAGCAGTCGATCTCTTCAATCAAGGAGCTTATTACGATTGCCATGACGTTCTTGAGACTCTGTGGAACGAAGCCGAGGACCCTACTAGAACCCTAATTCATGGCATTCTTCAGTGCGCTGTGGGGCTTCATCATCTCTTTAATCGGGTTGGTGATTTCATAATCTCTATTTTCGTTTGGTGATATCATATCGATGCTGTGTGTTTGTTTGAATTTGTGGGATGGAGTTAGTTGTGGTTGTGATTGTGAATTTGTTTTTGGGTTAGAATCATAGAGGCGCGATGATGGAGCTTGGAGAAGGGGTCTGTAAGCTACGGAAGATGGAGTTTCGGAGTGGGCCTTTCCGTACTTTTGAGAGGGAGATTACCGCAGTTTTGGACTTTGTTTACCTGACCCAGATTGAATTAGCTGCCTGTGAGTTCTTTTTCTCCCTCACTTTTTCTCCATTAGAACTCCAATTTTTGCTCTGAAACTTTTTAGTGCTCTTCTGGAAGAGACGGATTGATTTCGTAATTGAATTCTTGTTTTTAGTAAAATCATTTAGTTTATAAACTTTGAAATGACAAACTGGGTTGTTGATTTAATAATTGAACTTTCTTTTTGTTGTGTCTAGTTCTAAAACTTTGAGAGATCAGAGAAGTGAATGATTTAGGTCCATTGGTAACTATTTGAACTCCAATTATTTTGTTAGCTTTCAAAATTTGAATTATTTTAAAAAGATTCTAAAAAAGTAGAAAAAAAAAAAAAAAACCAAATAATTATCAAATAGGAACTTAAATGTTGAACTTGGGTATGTTTCAATGACTAGATTCAAGTTTGAATTGGAATTTTATGTGATCTTCGTAGTTAACATTGTTTATTAAATGATATAATGTGGGAAAATCTATCGAATAAATATGAGTTGATTTGAAGTGACCTATAAATAATGAAAAAAGATAATGTTAAAGACAATTTTTGGTGCTTGAATTTTTATTGTTTACATTGAAAAAATCAAGGCACCGCACAATCTTTATAAAATAAATGAGTTACTCTTTTCGTTGTCACTTGACTTTGAGATGAAACTCTATACATTCAACACAATGAATTAACTATTTAATTCCTCGAAAGGCTATAGAGTTAAGAAATTCGTTGACATTTTAAAAAGAAAGTTTAAAGATTAAATGATTACAAATTTAAAAAATCAAATTAAAAGTTCATAACTAAGACCTGGTTGGTAACCATTTTGTTCTTTAAAATTAAGTCTATAGACATTATTTCTACCTCTAAATTTCCTCCGTTGTTATATATTTTGTAGCAATGGTTTAAATATATATTTTGTAAACTAAAAAAAGTAGCTCTTAGAAACATGTTTTTGTTTTCAAAATTCGGCTAATGATGCAACTTTTCTACTTAAGACGGATACAAACTATGTAAGAAAGTATAAGAAAATAGGCTTAATTTTTAAAAACAAAAAATAAAAACGAAATGGTTACCAAACATGCCTAAATTGTTTAGTGAATGAAAATATAAAGACCAAAATATTATTTTATTGACCTAGAGAAAAAGATAATTGGTTTGATAAAATAAAATGATGTGTACCATATCTTATATCAATTAACACATCATATTCCTTTGATAAATCAAAATTTTGTTTGATCATCCACTTTCTTCTATCATTTGATAGTCAGGATAAAGTTTAGAATTTTTTAAAAGATTTAGACACTAAACAAATACCAAAACTTTATAATCTCTAAATTTATAACTTTTAACTGCTTATCCTTGATACTGAAACAAATATCAATGGTTGAAATAACATAAGAAATGAAATGATGATTATTTTGGATAATGTAACAGGTGATGAGAGTGTATGTGTTACAATGGAGGGTTCAGAGAGATCATATGAATTACTTGGAAGGTATGGTGAAGGACAGAAGCTGTATGATATAGAGAAACAAGTTGATGGAAGTATGTGCATTGTCTTTTCTCCTCAAACATCTCAAACTCATCCTCTAAGGGTAAAGCTTCCCATCCTTGATGCTACCAAACAACACCTTTTAGCCCTTGACTGCCATTGATATTCTTGGTCATTTTCTTTTTCAAACATACAAGAGACAAAGAAATATCTCACTTTTATTGTATAATAGTATAGGTAGTATTTGGTACGTGTTAGACTACAATATTTATGTTAGAAACAAACCATTCAAGGATAAATTATCGATTTAGTTATTTGAACTTTAATGGTTGTGTATATTTAGTTCATATAACATTTCATGATTTTAGTTTCATTTTTTAACTTTGAA
mRNA sequence
TTCAAAGCCACACAGCCTCACACGAAACCTCCAACCCTTCATTCCAAAAAAATCACACCAAGCAGAAATGGCTCCAATTCCTCAAGCTTCTTCAATCAATCGCCAATGGCTTCTCTTCTATCACTCTATCTTTCCTCCTCCTTCCCATCCCCTCTTCGACCTCACCGCACTTTGAACTTCATTTCCCGCCATGGATCCACCCTCCCAAGCTCTCCAAGAACCACAAACAGTCGAAGAATAACCACAATATCACTCTCCTTTCGGACCTCCTACCGATTCACCGCCGATCATGAAGACGAAGGCGAGAAAATCACCGGAGATTTCGGCTTCGATGAAGCAGTCGATCTCTTCAATCAAGGAGCTTATTACGATTGCCATGACGTTCTTGAGACTCTGTGGAACGAAGCCGAGGACCCTACTAGAACCCTAATTCATGGCATTCTTCAGTGCGCTGTGGGGCTTCATCATCTCTTTAATCGGAATCATAGAGGCGCGATGATGGAGCTTGGAGAAGGGGTCTGTAAGCTACGGAAGATGGAGTTTCGGAGTGGGCCTTTCCGTACTTTTGAGAGGGAGATTACCGCAGTTTTGGACTTTGTTTACCTGACCCAGATTGAATTAGCTGCCTGTGATGAGAGTGTATGTGTTACAATGGAGGGTTCAGAGAGATCATATGAATTACTTGGAAGGTATGGTGAAGGACAGAAGCTGTATGATATAGAGAAACAAGTTGATGGAAGTATGTGCATTGTCTTTTCTCCTCAAACATCTCAAACTCATCCTCTAAGGGTAAAGCTTCCCATCCTTGATGCTACCAAACAACACCTTTTAGCCCTTGACTGCCATTGATATTCTTGGTCATTTTCTTTTTCAAACATACAAGAGACAAAGAAATATCTCACTTTTATTGTATAATAGTATAGGTAGTATTTGGTACGTGTTAGACTACAATATTTATGTTAGAAACAAACCATTCAAGGATAAATTATCGATTTAGTTATTTGAACTTTAATGGTTGTGTATATTTAGTTCATATAACATTTCATGATTTTAGTTTCATTTTTTAACTTTGAA
Coding sequence (CDS)
ATGGCTTCTCTTCTATCACTCTATCTTTCCTCCTCCTTCCCATCCCCTCTTCGACCTCACCGCACTTTGAACTTCATTTCCCGCCATGGATCCACCCTCCCAAGCTCTCCAAGAACCACAAACAGTCGAAGAATAACCACAATATCACTCTCCTTTCGGACCTCCTACCGATTCACCGCCGATCATGAAGACGAAGGCGAGAAAATCACCGGAGATTTCGGCTTCGATGAAGCAGTCGATCTCTTCAATCAAGGAGCTTATTACGATTGCCATGACGTTCTTGAGACTCTGTGGAACGAAGCCGAGGACCCTACTAGAACCCTAATTCATGGCATTCTTCAGTGCGCTGTGGGGCTTCATCATCTCTTTAATCGGAATCATAGAGGCGCGATGATGGAGCTTGGAGAAGGGGTCTGTAAGCTACGGAAGATGGAGTTTCGGAGTGGGCCTTTCCGTACTTTTGAGAGGGAGATTACCGCAGTTTTGGACTTTGTTTACCTGACCCAGATTGAATTAGCTGCCTGTGATGAGAGTGTATGTGTTACAATGGAGGGTTCAGAGAGATCATATGAATTACTTGGAAGGTATGGTGAAGGACAGAAGCTGTATGATATAGAGAAACAAGTTGATGGAAGTATGTGCATTGTCTTTTCTCCTCAAACATCTCAAACTCATCCTCTAAGGGTAAAGCTTCCCATCCTTGATGCTACCAAACAACACCTTTTAGCCCTTGACTGCCATTGA
Protein sequence
MASLLSLYLSSSFPSPLRPHRTLNFISRHGSTLPSSPRTTNSRRITTISLSFRTSYRFTADHEDEGEKITGDFGFDEAVDLFNQGAYYDCHDVLETLWNEAEDPTRTLIHGILQCAVGLHHLFNRNHRGAMMELGEGVCKLRKMEFRSGPFRTFEREITAVLDFVYLTQIELAACDESVCVTMEGSERSYELLGRYGEGQKLYDIEKQVDGSMCIVFSPQTSQTHPLRVKLPILDATKQHLLALDCH
Homology
BLAST of PI0003677.1 vs. ExPASy TrEMBL
Match:
A0A5A7UHC0 (Uncharacterized ypuF OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G006130 PE=4 SV=1)
HSP 1 Score: 465.7 bits (1197), Expect = 1.2e-127
Identity = 230/249 (92.37%), Postives = 236/249 (94.78%), Query Frame = 0
Query: 1 MASLLSLYLSSSFPSPLRPHRTLNFISR--HGSTLPSSPRTTNSRRITTISLSFRTSYRF 60
MASLLSL++SSSFPSPL PHRT N ISR HGS PSSPRTTNSRRITTIS SFRTSYRF
Sbjct: 1 MASLLSLHISSSFPSPLLPHRTFNSISRHGHGSIPPSSPRTTNSRRITTISFSFRTSYRF 60
Query: 61 TADHEDEGEKITGDFGFDEAVDLFNQGAYYDCHDVLETLWNEAEDPTRTLIHGILQCAVG 120
TADHED EKITGDFGFDEAVDLFNQGAYYDCHDVLE+LWNEAEDPTRTLIHGILQCAVG
Sbjct: 61 TADHEDGDEKITGDFGFDEAVDLFNQGAYYDCHDVLESLWNEAEDPTRTLIHGILQCAVG 120
Query: 121 LHHLFNRNHRGAMMELGEGVCKLRKMEFRSGPFRTFEREITAVLDFVYLTQIELAACDES 180
LHHLFNRNHRGAMMELGEG+CKLRKMEF SGPF TFEREITAVLDFVYLTQIELAACDES
Sbjct: 121 LHHLFNRNHRGAMMELGEGICKLRKMEFGSGPFHTFEREITAVLDFVYLTQIELAACDES 180
Query: 181 VCVTMEGSERSYELLGRYGEGQKLYDIEKQVDGSMCIVFSPQTSQTHPLRVKLPILDATK 240
VCVTMEGSERSYELLGRYGEGQKLYD+EKQVDGSMCIVFSPQTSQTHPLRVKLP LDATK
Sbjct: 181 VCVTMEGSERSYELLGRYGEGQKLYDMEKQVDGSMCIVFSPQTSQTHPLRVKLPTLDATK 240
Query: 241 QHLLALDCH 248
QHLLALDC+
Sbjct: 241 QHLLALDCY 249
BLAST of PI0003677.1 vs. ExPASy TrEMBL
Match:
A0A1S3B7D9 (uncharacterized protein LOC103486836 OS=Cucumis melo OX=3656 GN=LOC103486836 PE=4 SV=1)
HSP 1 Score: 465.7 bits (1197), Expect = 1.2e-127
Identity = 230/249 (92.37%), Postives = 236/249 (94.78%), Query Frame = 0
Query: 1 MASLLSLYLSSSFPSPLRPHRTLNFISR--HGSTLPSSPRTTNSRRITTISLSFRTSYRF 60
MASLLSL++SSSFPSPL PHRT N ISR HGS PSSPRTTNSRRITTIS SFRTSYRF
Sbjct: 1 MASLLSLHISSSFPSPLLPHRTFNSISRHGHGSIPPSSPRTTNSRRITTISFSFRTSYRF 60
Query: 61 TADHEDEGEKITGDFGFDEAVDLFNQGAYYDCHDVLETLWNEAEDPTRTLIHGILQCAVG 120
TADHED EKITGDFGFDEAVDLFNQGAYYDCHDVLE+LWNEAEDPTRTLIHGILQCAVG
Sbjct: 61 TADHEDGDEKITGDFGFDEAVDLFNQGAYYDCHDVLESLWNEAEDPTRTLIHGILQCAVG 120
Query: 121 LHHLFNRNHRGAMMELGEGVCKLRKMEFRSGPFRTFEREITAVLDFVYLTQIELAACDES 180
LHHLFNRNHRGAMMELGEG+CKLRKMEF SGPF TFEREITAVLDFVYLTQIELAACDES
Sbjct: 121 LHHLFNRNHRGAMMELGEGICKLRKMEFGSGPFHTFEREITAVLDFVYLTQIELAACDES 180
Query: 181 VCVTMEGSERSYELLGRYGEGQKLYDIEKQVDGSMCIVFSPQTSQTHPLRVKLPILDATK 240
VCVTMEGSERSYELLGRYGEGQKLYD+EKQVDGSMCIVFSPQTSQTHPLRVKLP LDATK
Sbjct: 181 VCVTMEGSERSYELLGRYGEGQKLYDMEKQVDGSMCIVFSPQTSQTHPLRVKLPTLDATK 240
Query: 241 QHLLALDCH 248
QHLLALDC+
Sbjct: 241 QHLLALDCY 249
BLAST of PI0003677.1 vs. ExPASy TrEMBL
Match:
A0A0A0LC38 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G815420 PE=4 SV=1)
HSP 1 Score: 464.5 bits (1194), Expect = 2.7e-127
Identity = 230/247 (93.12%), Postives = 233/247 (94.33%), Query Frame = 0
Query: 1 MASLLSLYLSSSFPSPLRPHRTLNFISRHGSTLPSSPRTTNSRRITTISLSFRTSYRFTA 60
MASLLSLY+SSSFPSPL PHRT + IS HGSTL SSPRTTNSRRITTI LSFRTSYRFTA
Sbjct: 1 MASLLSLYISSSFPSPLPPHRTFSSISPHGSTLQSSPRTTNSRRITTIPLSFRTSYRFTA 60
Query: 61 DHEDEGEKITGDFGFDEAVDLFNQGAYYDCHDVLETLWNEAEDPTRTLIHGILQCAVGLH 120
DHED EKITGDFGFDEAVDLFNQGAYYDCHDVLE LWNEAEDPTRTLIHGILQCAVGLH
Sbjct: 61 DHEDGDEKITGDFGFDEAVDLFNQGAYYDCHDVLEALWNEAEDPTRTLIHGILQCAVGLH 120
Query: 121 HLFNRNHRGAMMELGEGVCKLRKMEFRSGPFRTFEREITAVLDFVYLTQIELAACDESVC 180
HLFNRNHRGAMMELGEGVCKLRKMEF SGPFRTFEREITAVLDFVYLTQIELAACDESVC
Sbjct: 121 HLFNRNHRGAMMELGEGVCKLRKMEFPSGPFRTFEREITAVLDFVYLTQIELAACDESVC 180
Query: 181 VTMEGSERSYELLGRYGEGQKLYDIEKQVDGSMCIVFSPQTSQTHPLRVKLPILDATKQH 240
VTMEGSERSYELLGRYGEGQKLYD+EKQVDGS CIVFS QTSQTHPLRVKLP LDATKQH
Sbjct: 181 VTMEGSERSYELLGRYGEGQKLYDMEKQVDGSTCIVFSSQTSQTHPLRVKLPTLDATKQH 240
Query: 241 LLALDCH 248
LLALD H
Sbjct: 241 LLALDSH 247
BLAST of PI0003677.1 vs. ExPASy TrEMBL
Match:
A0A6J1I2E8 (uncharacterized protein LOC111470277 OS=Cucurbita maxima OX=3661 GN=LOC111470277 PE=4 SV=1)
HSP 1 Score: 407.1 bits (1045), Expect = 5.1e-110
Identity = 204/249 (81.93%), Postives = 217/249 (87.15%), Query Frame = 0
Query: 1 MASLLSLYLSSSFPSPLRPHRTLNFISRHGSTLPSSPRTTNSRRITTISLSFRTSYRFTA 60
MASL SL +SSS PS LRPHR N + RHGS+LP+ PR T R TT SLSFRTSYRF
Sbjct: 1 MASLPSLCVSSSAPSLLRPHRHSNSLFRHGSSLPTPPRNTFRRGKTTTSLSFRTSYRFAV 60
Query: 61 DH--EDEGEKITGDFGFDEAVDLFNQGAYYDCHDVLETLWNEAEDPTRTLIHGILQCAVG 120
DH EDE E+I +F FDEAVDLFNQGAYYDCHDVLE LWN AEDPTRTLIHGILQCAVG
Sbjct: 61 DHEDEDEDEQIAREFSFDEAVDLFNQGAYYDCHDVLEILWNGAEDPTRTLIHGILQCAVG 120
Query: 121 LHHLFNRNHRGAMMELGEGVCKLRKMEFRSGPFRTFEREITAVLDFVYLTQIELAACDES 180
LHHLFNRNHRGAMMELGEG+CKLRKMEF++GPF TFEREI+AVLDF+YLTQIELAACDE+
Sbjct: 121 LHHLFNRNHRGAMMELGEGLCKLRKMEFQNGPFHTFEREISAVLDFIYLTQIELAACDEN 180
Query: 181 VCVTMEGSERSYELLGRYGEGQKLYDIEKQVDGSMCIVFSPQTSQTHPLRVKLPILDATK 240
VCVTMEGSERSYELLGRYG GQKLYD E +VDGSMCIVFSPQTSQTHPLRVKLP L ATK
Sbjct: 181 VCVTMEGSERSYELLGRYGAGQKLYDTEGEVDGSMCIVFSPQTSQTHPLRVKLPTLAATK 240
Query: 241 QHLLALDCH 248
QHLLALD H
Sbjct: 241 QHLLALDYH 249
BLAST of PI0003677.1 vs. ExPASy TrEMBL
Match:
A0A6J1G1I9 (uncharacterized protein LOC111449825 OS=Cucurbita moschata OX=3662 GN=LOC111449825 PE=4 SV=1)
HSP 1 Score: 404.4 bits (1038), Expect = 3.3e-109
Identity = 203/249 (81.53%), Postives = 216/249 (86.75%), Query Frame = 0
Query: 1 MASLLSLYLSSSFPSPLRPHRTLNFISRHGSTLPSSPRTTNSRRITTISLSFRTSYRFTA 60
MASL SL +SSS PS L PHR N + RHGS+LP+ PR T R TT SLSFRTSYRF
Sbjct: 1 MASLPSLCVSSSAPSLLPPHRHSNSLFRHGSSLPTPPRNTFRRGKTTTSLSFRTSYRFAV 60
Query: 61 DH--EDEGEKITGDFGFDEAVDLFNQGAYYDCHDVLETLWNEAEDPTRTLIHGILQCAVG 120
DH EDE E+I +F FDEAVDLFNQGAYYDCHDVLE LWN AEDPTRTLIHGILQCAVG
Sbjct: 61 DHEDEDEDEQIAREFSFDEAVDLFNQGAYYDCHDVLEILWNGAEDPTRTLIHGILQCAVG 120
Query: 121 LHHLFNRNHRGAMMELGEGVCKLRKMEFRSGPFRTFEREITAVLDFVYLTQIELAACDES 180
LHHLFNRNHRGAMMELGEG+CKLRKMEF++GPF TFEREI+AVLDF+YLTQIELAACDE+
Sbjct: 121 LHHLFNRNHRGAMMELGEGLCKLRKMEFQNGPFHTFEREISAVLDFIYLTQIELAACDEN 180
Query: 181 VCVTMEGSERSYELLGRYGEGQKLYDIEKQVDGSMCIVFSPQTSQTHPLRVKLPILDATK 240
VCVTMEGSERSYELLGRYG GQKLYD E +VDGSMCIVFSPQTSQTHPLRVKLP L ATK
Sbjct: 181 VCVTMEGSERSYELLGRYGAGQKLYDTEGEVDGSMCIVFSPQTSQTHPLRVKLPTLAATK 240
Query: 241 QHLLALDCH 248
QHLLALD H
Sbjct: 241 QHLLALDYH 249
BLAST of PI0003677.1 vs. NCBI nr
Match:
XP_008443170.1 (PREDICTED: uncharacterized protein LOC103486836 [Cucumis melo] >KAA0053937.1 Uncharacterized ypuF [Cucumis melo var. makuwa] >TYK25467.1 Uncharacterized ypuF [Cucumis melo var. makuwa])
HSP 1 Score: 465.7 bits (1197), Expect = 2.5e-127
Identity = 230/249 (92.37%), Postives = 236/249 (94.78%), Query Frame = 0
Query: 1 MASLLSLYLSSSFPSPLRPHRTLNFISR--HGSTLPSSPRTTNSRRITTISLSFRTSYRF 60
MASLLSL++SSSFPSPL PHRT N ISR HGS PSSPRTTNSRRITTIS SFRTSYRF
Sbjct: 1 MASLLSLHISSSFPSPLLPHRTFNSISRHGHGSIPPSSPRTTNSRRITTISFSFRTSYRF 60
Query: 61 TADHEDEGEKITGDFGFDEAVDLFNQGAYYDCHDVLETLWNEAEDPTRTLIHGILQCAVG 120
TADHED EKITGDFGFDEAVDLFNQGAYYDCHDVLE+LWNEAEDPTRTLIHGILQCAVG
Sbjct: 61 TADHEDGDEKITGDFGFDEAVDLFNQGAYYDCHDVLESLWNEAEDPTRTLIHGILQCAVG 120
Query: 121 LHHLFNRNHRGAMMELGEGVCKLRKMEFRSGPFRTFEREITAVLDFVYLTQIELAACDES 180
LHHLFNRNHRGAMMELGEG+CKLRKMEF SGPF TFEREITAVLDFVYLTQIELAACDES
Sbjct: 121 LHHLFNRNHRGAMMELGEGICKLRKMEFGSGPFHTFEREITAVLDFVYLTQIELAACDES 180
Query: 181 VCVTMEGSERSYELLGRYGEGQKLYDIEKQVDGSMCIVFSPQTSQTHPLRVKLPILDATK 240
VCVTMEGSERSYELLGRYGEGQKLYD+EKQVDGSMCIVFSPQTSQTHPLRVKLP LDATK
Sbjct: 181 VCVTMEGSERSYELLGRYGEGQKLYDMEKQVDGSMCIVFSPQTSQTHPLRVKLPTLDATK 240
Query: 241 QHLLALDCH 248
QHLLALDC+
Sbjct: 241 QHLLALDCY 249
BLAST of PI0003677.1 vs. NCBI nr
Match:
XP_004136604.1 (uncharacterized protein LOC101210744 [Cucumis sativus] >KGN59378.1 hypothetical protein Csa_001543 [Cucumis sativus])
HSP 1 Score: 464.5 bits (1194), Expect = 5.6e-127
Identity = 230/247 (93.12%), Postives = 233/247 (94.33%), Query Frame = 0
Query: 1 MASLLSLYLSSSFPSPLRPHRTLNFISRHGSTLPSSPRTTNSRRITTISLSFRTSYRFTA 60
MASLLSLY+SSSFPSPL PHRT + IS HGSTL SSPRTTNSRRITTI LSFRTSYRFTA
Sbjct: 1 MASLLSLYISSSFPSPLPPHRTFSSISPHGSTLQSSPRTTNSRRITTIPLSFRTSYRFTA 60
Query: 61 DHEDEGEKITGDFGFDEAVDLFNQGAYYDCHDVLETLWNEAEDPTRTLIHGILQCAVGLH 120
DHED EKITGDFGFDEAVDLFNQGAYYDCHDVLE LWNEAEDPTRTLIHGILQCAVGLH
Sbjct: 61 DHEDGDEKITGDFGFDEAVDLFNQGAYYDCHDVLEALWNEAEDPTRTLIHGILQCAVGLH 120
Query: 121 HLFNRNHRGAMMELGEGVCKLRKMEFRSGPFRTFEREITAVLDFVYLTQIELAACDESVC 180
HLFNRNHRGAMMELGEGVCKLRKMEF SGPFRTFEREITAVLDFVYLTQIELAACDESVC
Sbjct: 121 HLFNRNHRGAMMELGEGVCKLRKMEFPSGPFRTFEREITAVLDFVYLTQIELAACDESVC 180
Query: 181 VTMEGSERSYELLGRYGEGQKLYDIEKQVDGSMCIVFSPQTSQTHPLRVKLPILDATKQH 240
VTMEGSERSYELLGRYGEGQKLYD+EKQVDGS CIVFS QTSQTHPLRVKLP LDATKQH
Sbjct: 181 VTMEGSERSYELLGRYGEGQKLYDMEKQVDGSTCIVFSSQTSQTHPLRVKLPTLDATKQH 240
Query: 241 LLALDCH 248
LLALD H
Sbjct: 241 LLALDSH 247
BLAST of PI0003677.1 vs. NCBI nr
Match:
XP_038905159.1 (uncharacterized protein LOC120091273 [Benincasa hispida])
HSP 1 Score: 425.2 bits (1092), Expect = 3.7e-115
Identity = 209/245 (85.31%), Postives = 222/245 (90.61%), Query Frame = 0
Query: 1 MASLLSLYLSSSFPSPLRPHRTLNFISRHGSTLPSSPRTTNSRRITTISLSFRTSYRFTA 60
MASL +LY+SSS PSPLRPHR+LN I H ++LP PRT +S+R TTISLSFRTSY F A
Sbjct: 1 MASLPALYVSSSLPSPLRPHRSLNSIFSHETSLPCPPRTRSSQRRTTISLSFRTSYLFAA 60
Query: 61 DHEDEGEKITGDFGFDEAVDLFNQGAYYDCHDVLETLWNEAEDPTRTLIHGILQCAVGLH 120
DHEDE E+I DFGFDEAVDLFNQGAYYDCHDVLETLWN AEDPTRTL HGILQCAVGLH
Sbjct: 61 DHEDEDEQIARDFGFDEAVDLFNQGAYYDCHDVLETLWNGAEDPTRTLFHGILQCAVGLH 120
Query: 121 HLFNRNHRGAMMELGEGVCKLRKMEFRSGPFRTFEREITAVLDFVYLTQIELAACDESVC 180
HLFNRNHRGAMMELGEG+CKLRKM+F+SGPF TFEREITAVLDFVYLTQIELAACDE+VC
Sbjct: 121 HLFNRNHRGAMMELGEGLCKLRKMDFQSGPFYTFEREITAVLDFVYLTQIELAACDENVC 180
Query: 181 VTMEGSERSYELLGRYGEGQKLYDIEKQVDGSMCIVFSPQTSQTHPLRVKLPILDATKQH 240
VTMEGSERSYELLGRYG GQKLYDIEK+VDG MCIVFSPQTSQ HPLRVKLP L ATKQH
Sbjct: 181 VTMEGSERSYELLGRYGAGQKLYDIEKEVDGRMCIVFSPQTSQAHPLRVKLPTLAATKQH 240
Query: 241 LLALD 246
LLALD
Sbjct: 241 LLALD 245
BLAST of PI0003677.1 vs. NCBI nr
Match:
XP_022971602.1 (uncharacterized protein LOC111470277 [Cucurbita maxima] >XP_022971603.1 uncharacterized protein LOC111470277 [Cucurbita maxima] >KAG6596201.1 hypothetical protein SDJN03_09381, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 407.1 bits (1045), Expect = 1.1e-109
Identity = 204/249 (81.93%), Postives = 217/249 (87.15%), Query Frame = 0
Query: 1 MASLLSLYLSSSFPSPLRPHRTLNFISRHGSTLPSSPRTTNSRRITTISLSFRTSYRFTA 60
MASL SL +SSS PS LRPHR N + RHGS+LP+ PR T R TT SLSFRTSYRF
Sbjct: 1 MASLPSLCVSSSAPSLLRPHRHSNSLFRHGSSLPTPPRNTFRRGKTTTSLSFRTSYRFAV 60
Query: 61 DH--EDEGEKITGDFGFDEAVDLFNQGAYYDCHDVLETLWNEAEDPTRTLIHGILQCAVG 120
DH EDE E+I +F FDEAVDLFNQGAYYDCHDVLE LWN AEDPTRTLIHGILQCAVG
Sbjct: 61 DHEDEDEDEQIAREFSFDEAVDLFNQGAYYDCHDVLEILWNGAEDPTRTLIHGILQCAVG 120
Query: 121 LHHLFNRNHRGAMMELGEGVCKLRKMEFRSGPFRTFEREITAVLDFVYLTQIELAACDES 180
LHHLFNRNHRGAMMELGEG+CKLRKMEF++GPF TFEREI+AVLDF+YLTQIELAACDE+
Sbjct: 121 LHHLFNRNHRGAMMELGEGLCKLRKMEFQNGPFHTFEREISAVLDFIYLTQIELAACDEN 180
Query: 181 VCVTMEGSERSYELLGRYGEGQKLYDIEKQVDGSMCIVFSPQTSQTHPLRVKLPILDATK 240
VCVTMEGSERSYELLGRYG GQKLYD E +VDGSMCIVFSPQTSQTHPLRVKLP L ATK
Sbjct: 181 VCVTMEGSERSYELLGRYGAGQKLYDTEGEVDGSMCIVFSPQTSQTHPLRVKLPTLAATK 240
Query: 241 QHLLALDCH 248
QHLLALD H
Sbjct: 241 QHLLALDYH 249
BLAST of PI0003677.1 vs. NCBI nr
Match:
XP_023539066.1 (uncharacterized protein LOC111799819 [Cucurbita pepo subsp. pepo])
HSP 1 Score: 405.6 bits (1041), Expect = 3.1e-109
Identity = 203/247 (82.19%), Postives = 217/247 (87.85%), Query Frame = 0
Query: 1 MASLLSLYLSSSFPSPLRPHRTLNFISRHGSTLPSSPRTTNSRRITTISLSFRTSYRFTA 60
MASL SL +SSS PS LRPHR N + RHGS+LP+ PR T +R TT SLSFRTSYRF
Sbjct: 1 MASLPSLCVSSSAPSLLRPHRHSNTLFRHGSSLPTPPRNTFTRGKTTTSLSFRTSYRFAV 60
Query: 61 DH--EDEGEKITGDFGFDEAVDLFNQGAYYDCHDVLETLWNEAEDPTRTLIHGILQCAVG 120
DH EDE E+I +F FDEAVDLFNQGAYYDCHDVLE LWN AEDPTRTLIHGILQCAVG
Sbjct: 61 DHEDEDEDEQIAREFSFDEAVDLFNQGAYYDCHDVLEILWNGAEDPTRTLIHGILQCAVG 120
Query: 121 LHHLFNRNHRGAMMELGEGVCKLRKMEFRSGPFRTFEREITAVLDFVYLTQIELAACDES 180
LHHLFNRNHRGAMMELGEG+CKLRKMEF++GPF TFEREI+AVLDF+YLTQIELAACDE+
Sbjct: 121 LHHLFNRNHRGAMMELGEGLCKLRKMEFQNGPFHTFEREISAVLDFIYLTQIELAACDEN 180
Query: 181 VCVTMEGSERSYELLGRYGEGQKLYDIEKQVDGSMCIVFSPQTSQTHPLRVKLPILDATK 240
VCVTMEGSERSYELLGRYG GQKLYD E +VDGSMCIVFSPQTSQTHPLRVKLP L ATK
Sbjct: 181 VCVTMEGSERSYELLGRYGAGQKLYDTEGEVDGSMCIVFSPQTSQTHPLRVKLPTLAATK 240
Query: 241 QHLLALD 246
QHLLALD
Sbjct: 241 QHLLALD 247
BLAST of PI0003677.1 vs. TAIR 10
Match:
AT2G41120.1 (unknown protein; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF309 (InterPro:IPR005500); Has 349 Blast hits to 349 proteins in 112 species: Archae - 2; Bacteria - 189; Metazoa - 0; Fungi - 0; Plants - 31; Viruses - 0; Other Eukaryotes - 127 (source: NCBI BLink). )
HSP 1 Score: 234.6 bits (597), Expect = 8.7e-62
Identity = 128/243 (52.67%), Postives = 160/243 (65.84%), Query Frame = 0
Query: 11 SSFPSPLRPHRTLNFISRHGSTLPSSPRTTNSRRITTISLSFRTSYRFT----ADHEDEG 70
SSF S L P IS ST+ +S + ++ R + S R+ R+ D ED
Sbjct: 19 SSFFSSLIPSSP---ISVTASTIRASTKFSSIR----VRFSRRSIVRYNDHAGEDEEDSD 78
Query: 71 EKITGDFGFDEAVDLFNQGAYYDCHDVLETLWNEAEDPTRTLIHGILQCAVGLHHLFNRN 130
E + F+EAV LFN+ YY HD LE LW +AE+PTRTLIHGILQCAVG HHLFN N
Sbjct: 79 EDKEEYWSFEEAVTLFNKRDYYKSHDALEALWIQAEEPTRTLIHGILQCAVGFHHLFNNN 138
Query: 131 HRGAMMELGEGVCKLRKMEFRSGPFRTFEREITAVLDFVYLTQIELAACDESVCVTMEGS 190
H+GAMMELGEGVCKLRKM F GPF FER+++AVL+FVY TQ+ELAAC E +C+TM+ S
Sbjct: 139 HKGAMMELGEGVCKLRKMNFEDGPFHEFERDVSAVLEFVYQTQLELAACSEDMCLTMDQS 198
Query: 191 ERSYELLGRYGEGQKLYDIEKQVD------GSMCIVFSPQTSQTHPLRVKLPILDATKQH 244
+RSY+LLG Y G+ +Y +E +D + I+FSP S + P RVKLP L AT +H
Sbjct: 199 DRSYQLLGGYAAGESIYSLETVLDFNNGMSETTSILFSPLHSSSEPTRVKLPTLTATDKH 254
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A5A7UHC0 | 1.2e-127 | 92.37 | Uncharacterized ypuF OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352... | [more] |
A0A1S3B7D9 | 1.2e-127 | 92.37 | uncharacterized protein LOC103486836 OS=Cucumis melo OX=3656 GN=LOC103486836 PE=... | [more] |
A0A0A0LC38 | 2.7e-127 | 93.12 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G815420 PE=4 SV=1 | [more] |
A0A6J1I2E8 | 5.1e-110 | 81.93 | uncharacterized protein LOC111470277 OS=Cucurbita maxima OX=3661 GN=LOC111470277... | [more] |
A0A6J1G1I9 | 3.3e-109 | 81.53 | uncharacterized protein LOC111449825 OS=Cucurbita moschata OX=3662 GN=LOC1114498... | [more] |
Match Name | E-value | Identity | Description | |
XP_008443170.1 | 2.5e-127 | 92.37 | PREDICTED: uncharacterized protein LOC103486836 [Cucumis melo] >KAA0053937.1 Unc... | [more] |
XP_004136604.1 | 5.6e-127 | 93.12 | uncharacterized protein LOC101210744 [Cucumis sativus] >KGN59378.1 hypothetical ... | [more] |
XP_038905159.1 | 3.7e-115 | 85.31 | uncharacterized protein LOC120091273 [Benincasa hispida] | [more] |
XP_022971602.1 | 1.1e-109 | 81.93 | uncharacterized protein LOC111470277 [Cucurbita maxima] >XP_022971603.1 uncharac... | [more] |
XP_023539066.1 | 3.1e-109 | 82.19 | uncharacterized protein LOC111799819 [Cucurbita pepo subsp. pepo] | [more] |
Match Name | E-value | Identity | Description | |
AT2G41120.1 | 8.7e-62 | 52.67 | unknown protein; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplas... | [more] |
Relationships
This mRNA is a part of the following gene feature(s):
Feature Name | Unique Name | Type |
PI0003677 | PI0003677 | gene |
The following exon feature(s) are a part of this mRNA:
Feature Name | Unique Name | Type |
PI0003677.1-exon | PI0003677.1-exon-chr04:7043760..7044205 | exon |
PI0003677.1-exon | PI0003677.1-exon-chr04:7045625..7045772 | exon |
PI0003677.1-exon | PI0003677.1-exon-chr04:7045892..7046371 | exon |
The following three_prime_UTR feature(s) are a part of this mRNA:
Feature Name | Unique Name | Type |
PI0003677.1-three_prime_utr | PI0003677.1-three_prime_utr-chr04:7043760..7043984 | three_prime_UTR |
The following CDS feature(s) are a part of this mRNA:
Feature Name | Unique Name | Type |
PI0003677.1-cds | PI0003677.1-cds-chr04:7043985..7044205 | CDS |
PI0003677.1-cds | PI0003677.1-cds-chr04:7045625..7045772 | CDS |
PI0003677.1-cds | PI0003677.1-cds-chr04:7045892..7046266 | CDS |
The following five_prime_UTR feature(s) are a part of this mRNA:
Feature Name | Unique Name | Type |
PI0003677.1-five_prime_utr | PI0003677.1-five_prime_utr-chr04:7046267..7046371 | five_prime_UTR |
The following polypeptide feature(s) derives from this mRNA:
Feature Name | Unique Name | Type |
PI0003677.1 | PI0003677.1-protein | polypeptide |