PI0002332.1 (mRNA) Melon (PI 482460) v1

Overview


Name	PI0002332.1
Type	mRNA
Organism	Cucumis metuliferus (Melon (PI 482460) v1)
Description	Beta-galactosidase
Location	chr11: 27802133 .. 27802693 (+)
Sequence length	438
RNA-Seq Expression	PI0002332.1
Synteny	PI0002332.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCCAACAAAAAATCTGATTGTGGTTTTTGAGGAGGTTAGCGGGAATCCTTCAAGGATTAGTCTTGTAAAGAGATCAGTTACAAGTATTTGTACTGAGGCATCTCAGTATCGCCCCGTTATCAAGAACGTGCACATGCATCAAAACCATGGAGAATTGAATGAGCAAAATGTGCTAAAGATTAACCTGCATTGTGCAGCTGGGCAGTTCATTTCAGCTATCAAATTTGCAAGCTTTGGAACTCCAAGTGGAGCTTGTGGAAGTCATGAGCAGGGGACCTGTCATTCTCCAAAATCAGATTCTGTGTTGCAGAAGGTATGTGAATTTACACCATCATATAACCAACATTTTCAAAAATTTTATTTGATGTGTAAAGGGAAAAATAAAAAATTCAAAATGCAATACCATGTTCCTAACTTTTTACTCTGTCCTTTCCAGCTATGCGTTGGTCGACGGAGATGCTCGGCGACCATACCAACCAGCATTTTTGGAGAAGATCCATGTCCAAATTTATGGAAAAAACTATCTGCTGAAGTTGTCTGCCAACCGGTAGCTACATAG

mRNA sequence

ATGCCAACAAAAAATCTGATTGTGGTTTTTGAGGAGGTTAGCGGGAATCCTTCAAGGATTAGTCTTGTAAAGAGATCAGTTACAAGTATTTGTACTGAGGCATCTCAGTATCGCCCCGTTATCAAGAACGTGCACATGCATCAAAACCATGGAGAATTGAATGAGCAAAATGTGCTAAAGATTAACCTGCATTGTGCAGCTGGGCAGTTCATTTCAGCTATCAAATTTGCAAGCTTTGGAACTCCAAGTGGAGCTTGTGGAAGTCATGAGCAGGGGACCTGTCATTCTCCAAAATCAGATTCTGTGTTGCAGAAGCTATGCGTTGGTCGACGGAGATGCTCGGCGACCATACCAACCAGCATTTTTGGAGAAGATCCATGTCCAAATTTATGGAAAAAACTATCTGCTGAAGTTGTCTGCCAACCGGTAGCTACATAG

Coding sequence (CDS)

ATGCCAACAAAAAATCTGATTGTGGTTTTTGAGGAGGTTAGCGGGAATCCTTCAAGGATTAGTCTTGTAAAGAGATCAGTTACAAGTATTTGTACTGAGGCATCTCAGTATCGCCCCGTTATCAAGAACGTGCACATGCATCAAAACCATGGAGAATTGAATGAGCAAAATGTGCTAAAGATTAACCTGCATTGTGCAGCTGGGCAGTTCATTTCAGCTATCAAATTTGCAAGCTTTGGAACTCCAAGTGGAGCTTGTGGAAGTCATGAGCAGGGGACCTGTCATTCTCCAAAATCAGATTCTGTGTTGCAGAAGCTATGCGTTGGTCGACGGAGATGCTCGGCGACCATACCAACCAGCATTTTTGGAGAAGATCCATGTCCAAATTTATGGAAAAAACTATCTGCTGAAGTTGTCTGCCAACCGGTAGCTACATAG

Protein sequence

MPTKNLIVVFEEVSGNPSRISLVKRSVTSICTEASQYRPVIKNVHMHQNHGELNEQNVLKINLHCAAGQFISAIKFASFGTPSGACGSHEQGTCHSPKSDSVLQKLCVGRRRCSATIPTSIFGEDPCPNLWKKLSAEVVCQPVAT

Homology

[Close]

BLAST of PI0002332.1 vs. ExPASy Swiss-Prot
Match: Q9SCV9 (Beta-galactosidase 3 OS=Arabidopsis thaliana OX=3702 GN=BGAL3 PE=2 SV=1)

HSP 1 Score: 162.2 bits (409), Expect = 4.5e-39
Identity = 73/141 (51.77%), Postives = 106/141 (75.18%), Query Frame = 0


Query: 2   PTKNLIVVFEEVSGNPSRISLVKRSVTSICTEASQYRPVIKNVHMHQNHGELNEQNVLKI 61
           P++NL+V+FEE+ GNPS +SLVKRSV+ +C E S+Y P IKN  + +++G+    +  K+
Sbjct: 708 PSQNLLVIFEELGGNPSTVSLVKRSVSGVCAEVSEYHPNIKNWQI-ESYGKGQTFHRPKV 767

Query: 62  NLHCAAGQFISAIKFASFGTPSGACGSHEQGTCHSPKSDSVLQKLCVGRRRCSATIPTSI 121
           +L C+ GQ I++IKFASFGTP G CGS++QG CH+  S ++L++ CVG+ RC+ TI  S 
Sbjct: 768 HLKCSPGQAIASIKFASFGTPLGTCGSYQQGECHAATSYAILERKCVGKARCAVTISNSN 827

Query: 122 FGEDPCPNLWKKLSAEVVCQP 143
           FG+DPCPN+ K+L+ E VC P
Sbjct: 828 FGKDPCPNVLKRLTVEAVCAP 847

[Close]

BLAST of PI0002332.1 vs. ExPASy Swiss-Prot
Match: Q10RB4 (Beta-galactosidase 5 OS=Oryza sativa subsp. japonica OX=39947 GN=Os03g0165400 PE=2 SV=1)

HSP 1 Score: 154.1 bits (388), Expect = 1.2e-36
Identity = 74/143 (51.75%), Postives = 102/143 (71.33%), Query Frame = 0


Query: 2   PTKNLIVVFEEVSGNPSRISLVKRSVTSICTEASQYRPVIKNVHMHQNHGELNEQNVLKI 61
           PT+NL+VVFEE+ G+ S+I+L KR+V+ +C + S+Y P IKN  + +++GE  E +  K+
Sbjct: 701 PTRNLLVVFEELGGDSSKIALAKRTVSGVCADVSEYHPNIKNWQI-ESYGE-PEFHTAKV 760

Query: 62  NLHCAAGQFISAIKFASFGTPSGACGSHEQGTCHSPKSDSVLQKLCVGRRRCSATIPTSI 121
           +L CA GQ ISAIKFASFGTP G CG+ +QG CHS  S+SVL+K C+G +RC   I  S 
Sbjct: 761 HLKCAPGQTISAIKFASFGTPLGTCGTFQQGECHSINSNSVLEKKCIGLQRCVVAISPSN 820

Query: 122 FGEDPCPNLWKKLSAEVVCQPVA 145
           FG DPCP + K+++ E VC   A
Sbjct: 821 FGGDPCPEVMKRVAVEAVCSTAA 841

[Close]

BLAST of PI0002332.1 vs. ExPASy Swiss-Prot
Match: Q9SCW1 (Beta-galactosidase 1 OS=Arabidopsis thaliana OX=3702 GN=BGAL1 PE=2 SV=1)

HSP 1 Score: 142.1 bits (357), Expect = 4.9e-33
Identity = 65/139 (46.76%), Postives = 93/139 (66.91%), Query Frame = 0


Query: 2   PTKNLIVVFEEVSGNPSRISLVKRSVTSICTEASQYRPVIKNVHMHQNHGELNEQNVLKI 61
           P+ NL+VVFEE  G+P+ I+LV+R V S+C +  +++  + N  +H + G++N+    K 
Sbjct: 709 PSGNLLVVFEEWGGDPNGITLVRREVDSVCADIYEWQSTLVNYQLHAS-GKVNKPLHPKA 768

Query: 62  NLHCAAGQFISAIKFASFGTPSGACGSHEQGTCHSPKSDSVLQKLCVGRRRCSATIPTSI 121
           +L C  GQ I+ +KFASFGTP G CGS+ QG+CH+  S     KLCVG+  CS T+   +
Sbjct: 769 HLQCGPGQKITTVKFASFGTPEGTCGSYRQGSCHAHHSYDAFNKLCVGQNWCSVTVAPEM 828

Query: 122 FGEDPCPNLWKKLSAEVVC 141
           FG DPCPN+ KKL+ E VC
Sbjct: 829 FGGDPCPNVMKKLAVEAVC 846

[Close]

BLAST of PI0002332.1 vs. ExPASy Swiss-Prot
Match: Q8W0A1 (Beta-galactosidase 2 OS=Oryza sativa subsp. japonica OX=39947 GN=Os01g0580200 PE=2 SV=1)

HSP 1 Score: 137.5 bits (345), Expect = 1.2e-31
Identity = 63/139 (45.32%), Postives = 89/139 (64.03%), Query Frame = 0


Query: 2   PTKNLIVVFEEVSGNPSRISLVKRSVTSICTEASQYRPVIKNVHMHQNHGELNEQNVLKI 61
           PT NL+V+FEE  G+P+ IS+VKRS+ S+C + S+++P +KN H         +    K+
Sbjct: 695 PTGNLLVIFEEWGGDPTGISMVKRSIGSVCADVSEWQPSMKNWH-------TKDYEKAKV 754

Query: 62  NLHCAAGQFISAIKFASFGTPSGACGSHEQGTCHSPKSDSVLQKLCVGRRRCSATIPTSI 121
           +L C  GQ I+ IKFASFGTP G+CGS+ +G CH+ KS  +  K CVG+ RC  ++   I
Sbjct: 755 HLQCDNGQKITEIKFASFGTPQGSCGSYTEGGCHAHKSYDIFWKNCVGQERCGVSVVPEI 814

Query: 122 FGEDPCPNLWKKLSAEVVC 141
           FG DPCP   K+   E +C
Sbjct: 815 FGGDPCPGTMKRAVVEAIC 826

[Close]

BLAST of PI0002332.1 vs. ExPASy Swiss-Prot
Match: P48980 (Beta-galactosidase OS=Solanum lycopersicum OX=4081 PE=1 SV=1)

HSP 1 Score: 134.0 bits (336), Expect = 1.3e-30
Identity = 65/139 (46.76%), Postives = 89/139 (64.03%), Query Frame = 0


Query: 2   PTKNLIVVFEEVSGNPSRISLVKRSVTSICTEASQYRPVIKNVHMHQNHGELNEQNVLKI 61
           PT NL+VVFEE  G+P  I+LVKR + S+C +  +++P + N       G+ +     K 
Sbjct: 697 PTGNLLVVFEEWGGDPYGITLVKREIGSVCADIYEWQPQLLN-WQRLVSGKFDRPLRPKA 756

Query: 62  NLHCAAGQFISAIKFASFGTPSGACGSHEQGTCHSPKSDSVLQKLCVGRRRCSATIPTSI 121
           +L CA GQ IS+IKFASFGTP G CG+ +QG+CH+P+S    +K CVG+  CS  +    
Sbjct: 757 HLKCAPGQKISSIKFASFGTPEGVCGNFQQGSCHAPRSYDAFKKNCVGKESCSVQVTPEN 816

Query: 122 FGEDPCPNLWKKLSAEVVC 141
           FG DPC N+ KKLS E +C
Sbjct: 817 FGGDPCRNVLKKLSVEAIC 834

[Close]

BLAST of PI0002332.1 vs. ExPASy TrEMBL
Match: A0A5A7TU13 (Beta-galactosidase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold243G001270 PE=3 SV=1)

HSP 1 Score: 285.8 bits (730), Expect = 1.0e-73
Identity = 139/145 (95.86%), Postives = 141/145 (97.24%), Query Frame = 0


Query: 1   MPTKNLIVVFEEVSGNPSRISLVKRSVTSICTEASQYRPVIKNVHMHQNHGELNEQNVLK 60
           MPTKNLIVVFEEV GNPSRISLVKRSVTSICTEASQYRPVIKNVHMHQN+ ELNEQNVLK
Sbjct: 551 MPTKNLIVVFEEVGGNPSRISLVKRSVTSICTEASQYRPVIKNVHMHQNYAELNEQNVLK 610

Query: 61  INLHCAAGQFISAIKFASFGTPSGACGSHEQGTCHSPKSDSVLQKLCVGRRRCSATIPTS 120
           INLHCAAGQFISAIKFASFGTP+GACGSHEQGTCHSPKSDSVLQKLCVGRRRC ATIPTS
Sbjct: 611 INLHCAAGQFISAIKFASFGTPTGACGSHEQGTCHSPKSDSVLQKLCVGRRRCLATIPTS 670

Query: 121 IFGEDPCPNLWKKLSAEVVCQPVAT 146
           IFGEDPCPNL KKLSAEVVCQPVAT
Sbjct: 671 IFGEDPCPNLRKKLSAEVVCQPVAT 695

[Close]

BLAST of PI0002332.1 vs. ExPASy TrEMBL
Match: A0A1S3CDQ7 (Beta-galactosidase OS=Cucumis melo OX=3656 GN=LOC103499709 PE=3 SV=1)

HSP 1 Score: 285.8 bits (730), Expect = 1.0e-73
Identity = 139/145 (95.86%), Postives = 141/145 (97.24%), Query Frame = 0


Query: 1   MPTKNLIVVFEEVSGNPSRISLVKRSVTSICTEASQYRPVIKNVHMHQNHGELNEQNVLK 60
           MPTKNLIVVFEEV GNPSRISLVKRSVTSICTEASQYRPVIKNVHMHQN+ ELNEQNVLK
Sbjct: 701 MPTKNLIVVFEEVGGNPSRISLVKRSVTSICTEASQYRPVIKNVHMHQNYAELNEQNVLK 760

Query: 61  INLHCAAGQFISAIKFASFGTPSGACGSHEQGTCHSPKSDSVLQKLCVGRRRCSATIPTS 120
           INLHCAAGQFISAIKFASFGTP+GACGSHEQGTCHSPKSDSVLQKLCVGRRRC ATIPTS
Sbjct: 761 INLHCAAGQFISAIKFASFGTPTGACGSHEQGTCHSPKSDSVLQKLCVGRRRCLATIPTS 820

Query: 121 IFGEDPCPNLWKKLSAEVVCQPVAT 146
           IFGEDPCPNL KKLSAEVVCQPVAT
Sbjct: 821 IFGEDPCPNLRKKLSAEVVCQPVAT 845

[Close]

BLAST of PI0002332.1 vs. ExPASy TrEMBL
Match: A0A0A0LL95 (Beta-galactosidase OS=Cucumis sativus OX=3659 GN=Csa_2G249880 PE=3 SV=1)

HSP 1 Score: 283.5 bits (724), Expect = 5.0e-73
Identity = 138/145 (95.17%), Postives = 141/145 (97.24%), Query Frame = 0


Query: 1   MPTKNLIVVFEEVSGNPSRISLVKRSVTSICTEASQYRPVIKNVHMHQNHGELNEQNVLK 60
           MPTKNLIVVFEEV GNPSRISLVKRSVTSICTEASQYRPVIKNVHMHQN+GELNEQNVLK
Sbjct: 704 MPTKNLIVVFEEVGGNPSRISLVKRSVTSICTEASQYRPVIKNVHMHQNNGELNEQNVLK 763

Query: 61  INLHCAAGQFISAIKFASFGTPSGACGSHEQGTCHSPKSDSVLQKLCVGRRRCSATIPTS 120
           INLHCAAGQFISAIKFASFGTPSGACGSH+QGTCHSPKSD VLQKLCVGR+RC ATIPTS
Sbjct: 764 INLHCAAGQFISAIKFASFGTPSGACGSHKQGTCHSPKSDYVLQKLCVGRQRCLATIPTS 823

Query: 121 IFGEDPCPNLWKKLSAEVVCQPVAT 146
           IFGEDPCPNL KKLSAEVVCQPVAT
Sbjct: 824 IFGEDPCPNLRKKLSAEVVCQPVAT 848

[Close]

BLAST of PI0002332.1 vs. ExPASy TrEMBL
Match: A0A5D3BU41 (Beta-galactosidase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold280G00480 PE=3 SV=1)

HSP 1 Score: 263.5 bits (672), Expect = 5.3e-67
Identity = 127/134 (94.78%), Postives = 130/134 (97.01%), Query Frame = 0


Query: 12  EVSGNPSRISLVKRSVTSICTEASQYRPVIKNVHMHQNHGELNEQNVLKINLHCAAGQFI 71
           +V GNPSRISLVKRSVTSICTEASQYRPVIKNVHMHQN+ ELNEQNVLKINLHCAAGQFI
Sbjct: 547 QVGGNPSRISLVKRSVTSICTEASQYRPVIKNVHMHQNYAELNEQNVLKINLHCAAGQFI 606

Query: 72  SAIKFASFGTPSGACGSHEQGTCHSPKSDSVLQKLCVGRRRCSATIPTSIFGEDPCPNLW 131
           SAIKFASFGTP+GACGSHEQGTCHSPKSDSVLQKLCVGRRRC ATIPTSIFGEDPCPNL 
Sbjct: 607 SAIKFASFGTPTGACGSHEQGTCHSPKSDSVLQKLCVGRRRCLATIPTSIFGEDPCPNLR 666

Query: 132 KKLSAEVVCQPVAT 146
           KKLSAEVVCQPVAT
Sbjct: 667 KKLSAEVVCQPVAT 680

[Close]

BLAST of PI0002332.1 vs. ExPASy TrEMBL
Match: A0A6J1CYF4 (Beta-galactosidase OS=Momordica charantia OX=3673 GN=LOC111015426 PE=3 SV=1)

HSP 1 Score: 249.2 bits (635), Expect = 1.0e-62
Identity = 119/144 (82.64%), Postives = 132/144 (91.67%), Query Frame = 0


Query: 1   MPTKNLIVVFEEVSGNPSRISLVKRSVTSICTEASQYRPVIKNVHMHQNHGELNEQNVLK 60
           MP+KNLIVVFEE+ GNPSRI+LVKRSVTSIC EAS++RPVIK+ H++QNHGELN+QNV+K
Sbjct: 721 MPSKNLIVVFEEIDGNPSRINLVKRSVTSICAEASEFRPVIKSWHVNQNHGELNQQNVVK 780

Query: 61  INLHCAAGQFISAIKFASFGTPSGACGSHEQGTCHSPKSDSVLQKLCVGRRRCSATIPTS 120
           INLHCAAGQ ISAIKFASFGTP G+CGS  QGTCHSP S SVLQKLCVGRRRC AT+PTS
Sbjct: 781 INLHCAAGQSISAIKFASFGTPIGSCGSLGQGTCHSPNSQSVLQKLCVGRRRCLATVPTS 840

Query: 121 IFGEDPCPNLWKKLSAEVVCQPVA 145
           IFGEDPCPN+ KKLSAEVVC PVA
Sbjct: 841 IFGEDPCPNVRKKLSAEVVCAPVA 864

[Close]

BLAST of PI0002332.1 vs. NCBI nr
Match: KAA0045616.1 (beta-galactosidase 5-like [Cucumis melo var. makuwa])

HSP 1 Score: 285.8 bits (730), Expect = 2.1e-73
Identity = 139/145 (95.86%), Postives = 141/145 (97.24%), Query Frame = 0


Query: 1   MPTKNLIVVFEEVSGNPSRISLVKRSVTSICTEASQYRPVIKNVHMHQNHGELNEQNVLK 60
           MPTKNLIVVFEEV GNPSRISLVKRSVTSICTEASQYRPVIKNVHMHQN+ ELNEQNVLK
Sbjct: 551 MPTKNLIVVFEEVGGNPSRISLVKRSVTSICTEASQYRPVIKNVHMHQNYAELNEQNVLK 610

Query: 61  INLHCAAGQFISAIKFASFGTPSGACGSHEQGTCHSPKSDSVLQKLCVGRRRCSATIPTS 120
           INLHCAAGQFISAIKFASFGTP+GACGSHEQGTCHSPKSDSVLQKLCVGRRRC ATIPTS
Sbjct: 611 INLHCAAGQFISAIKFASFGTPTGACGSHEQGTCHSPKSDSVLQKLCVGRRRCLATIPTS 670

Query: 121 IFGEDPCPNLWKKLSAEVVCQPVAT 146
           IFGEDPCPNL KKLSAEVVCQPVAT
Sbjct: 671 IFGEDPCPNLRKKLSAEVVCQPVAT 695

[Close]

BLAST of PI0002332.1 vs. NCBI nr
Match: XP_008460995.1 (PREDICTED: beta-galactosidase 5-like [Cucumis melo])

HSP 1 Score: 285.8 bits (730), Expect = 2.1e-73
Identity = 139/145 (95.86%), Postives = 141/145 (97.24%), Query Frame = 0


Query: 1   MPTKNLIVVFEEVSGNPSRISLVKRSVTSICTEASQYRPVIKNVHMHQNHGELNEQNVLK 60
           MPTKNLIVVFEEV GNPSRISLVKRSVTSICTEASQYRPVIKNVHMHQN+ ELNEQNVLK
Sbjct: 701 MPTKNLIVVFEEVGGNPSRISLVKRSVTSICTEASQYRPVIKNVHMHQNYAELNEQNVLK 760

Query: 61  INLHCAAGQFISAIKFASFGTPSGACGSHEQGTCHSPKSDSVLQKLCVGRRRCSATIPTS 120
           INLHCAAGQFISAIKFASFGTP+GACGSHEQGTCHSPKSDSVLQKLCVGRRRC ATIPTS
Sbjct: 761 INLHCAAGQFISAIKFASFGTPTGACGSHEQGTCHSPKSDSVLQKLCVGRRRCLATIPTS 820

Query: 121 IFGEDPCPNLWKKLSAEVVCQPVAT 146
           IFGEDPCPNL KKLSAEVVCQPVAT
Sbjct: 821 IFGEDPCPNLRKKLSAEVVCQPVAT 845

[Close]

BLAST of PI0002332.1 vs. NCBI nr
Match: XP_004150073.1 (beta-galactosidase 5 [Cucumis sativus] >KGN61834.1 hypothetical protein Csa_006172 [Cucumis sativus])

HSP 1 Score: 283.5 bits (724), Expect = 1.0e-72
Identity = 138/145 (95.17%), Postives = 141/145 (97.24%), Query Frame = 0


Query: 1   MPTKNLIVVFEEVSGNPSRISLVKRSVTSICTEASQYRPVIKNVHMHQNHGELNEQNVLK 60
           MPTKNLIVVFEEV GNPSRISLVKRSVTSICTEASQYRPVIKNVHMHQN+GELNEQNVLK
Sbjct: 704 MPTKNLIVVFEEVGGNPSRISLVKRSVTSICTEASQYRPVIKNVHMHQNNGELNEQNVLK 763

Query: 61  INLHCAAGQFISAIKFASFGTPSGACGSHEQGTCHSPKSDSVLQKLCVGRRRCSATIPTS 120
           INLHCAAGQFISAIKFASFGTPSGACGSH+QGTCHSPKSD VLQKLCVGR+RC ATIPTS
Sbjct: 764 INLHCAAGQFISAIKFASFGTPSGACGSHKQGTCHSPKSDYVLQKLCVGRQRCLATIPTS 823

Query: 121 IFGEDPCPNLWKKLSAEVVCQPVAT 146
           IFGEDPCPNL KKLSAEVVCQPVAT
Sbjct: 824 IFGEDPCPNLRKKLSAEVVCQPVAT 848

[Close]

BLAST of PI0002332.1 vs. NCBI nr
Match: XP_038901907.1 (beta-galactosidase 3-like [Benincasa hispida])

HSP 1 Score: 265.0 bits (676), Expect = 3.8e-67
Identity = 127/145 (87.59%), Postives = 135/145 (93.10%), Query Frame = 0


Query: 1   MPTKNLIVVFEEVSGNPSRISLVKRSVTSICTEASQYRPVIKNVHMHQNHGELNEQNVLK 60
           MP+KNLIVVFEEV GNP +ISLVKRS+TSICTEAS+YRPV+KN H HQNHGELNEQNVLK
Sbjct: 699 MPSKNLIVVFEEVGGNPLKISLVKRSITSICTEASEYRPVVKNKHTHQNHGELNEQNVLK 758

Query: 61  INLHCAAGQFISAIKFASFGTPSGACGSHEQGTCHSPKSDSVLQKLCVGRRRCSATIPTS 120
           INLHCAAGQFISAIKFASFGTP GACGS EQGTCHS KS SVLQK+CVGRRRC AT+PTS
Sbjct: 759 INLHCAAGQFISAIKFASFGTPRGACGSLEQGTCHSSKSLSVLQKVCVGRRRCLATVPTS 818

Query: 121 IFGEDPCPNLWKKLSAEVVCQPVAT 146
           IFGEDPCPNL KKLSAEVVCQP+AT
Sbjct: 819 IFGEDPCPNLRKKLSAEVVCQPIAT 843

[Close]

BLAST of PI0002332.1 vs. NCBI nr
Match: TYK02640.1 (beta-galactosidase 5-like [Cucumis melo var. makuwa])

HSP 1 Score: 263.5 bits (672), Expect = 1.1e-66
Identity = 127/134 (94.78%), Postives = 130/134 (97.01%), Query Frame = 0


Query: 12  EVSGNPSRISLVKRSVTSICTEASQYRPVIKNVHMHQNHGELNEQNVLKINLHCAAGQFI 71
           +V GNPSRISLVKRSVTSICTEASQYRPVIKNVHMHQN+ ELNEQNVLKINLHCAAGQFI
Sbjct: 547 QVGGNPSRISLVKRSVTSICTEASQYRPVIKNVHMHQNYAELNEQNVLKINLHCAAGQFI 606

Query: 72  SAIKFASFGTPSGACGSHEQGTCHSPKSDSVLQKLCVGRRRCSATIPTSIFGEDPCPNLW 131
           SAIKFASFGTP+GACGSHEQGTCHSPKSDSVLQKLCVGRRRC ATIPTSIFGEDPCPNL 
Sbjct: 607 SAIKFASFGTPTGACGSHEQGTCHSPKSDSVLQKLCVGRRRCLATIPTSIFGEDPCPNLR 666

Query: 132 KKLSAEVVCQPVAT 146
           KKLSAEVVCQPVAT
Sbjct: 667 KKLSAEVVCQPVAT 680

[Close]

BLAST of PI0002332.1 vs. TAIR 10
Match: AT4G36360.1 (beta-galactosidase 3 )

HSP 1 Score: 162.2 bits (409), Expect = 3.2e-40
Identity = 73/141 (51.77%), Postives = 106/141 (75.18%), Query Frame = 0


Query: 2   PTKNLIVVFEEVSGNPSRISLVKRSVTSICTEASQYRPVIKNVHMHQNHGELNEQNVLKI 61
           P++NL+V+FEE+ GNPS +SLVKRSV+ +C E S+Y P IKN  + +++G+    +  K+
Sbjct: 708 PSQNLLVIFEELGGNPSTVSLVKRSVSGVCAEVSEYHPNIKNWQI-ESYGKGQTFHRPKV 767

Query: 62  NLHCAAGQFISAIKFASFGTPSGACGSHEQGTCHSPKSDSVLQKLCVGRRRCSATIPTSI 121
           +L C+ GQ I++IKFASFGTP G CGS++QG CH+  S ++L++ CVG+ RC+ TI  S 
Sbjct: 768 HLKCSPGQAIASIKFASFGTPLGTCGSYQQGECHAATSYAILERKCVGKARCAVTISNSN 827

Query: 122 FGEDPCPNLWKKLSAEVVCQP 143
           FG+DPCPN+ K+L+ E VC P
Sbjct: 828 FGKDPCPNVLKRLTVEAVCAP 847

[Close]

BLAST of PI0002332.1 vs. TAIR 10
Match: AT4G36360.2 (beta-galactosidase 3 )

HSP 1 Score: 158.3 bits (399), Expect = 4.7e-39
Identity = 73/141 (51.77%), Postives = 106/141 (75.18%), Query Frame = 0


Query: 2   PTKNLIVVFEEVSGNPSRISLVKRSVTSICTEASQYRPVIKNVHMHQNHGELNEQNVLKI 61
           P++NL+V+FEE+ GNPS +SLVKRSV+ +C E S+Y P IKN  + +++G+    +  K+
Sbjct: 708 PSQNLLVIFEELGGNPSTVSLVKRSVSGVCAEVSEYHPNIKNWQI-ESYGKGQTFHRPKV 767

Query: 62  NLHCAAGQFISAIKFASFGTPSGACGSHEQGTCHSPKSDSVLQKLCVGRRRCSATIPTSI 121
           +L C+ GQ I++IKFASFGTP G CGS++QG CH+  S ++L++ CVG+ RC+ TI  S 
Sbjct: 768 HLKCSPGQAIASIKFASFGTPLGTCGSYQQGECHAATSYAILER-CVGKARCAVTISNSN 827

Query: 122 FGEDPCPNLWKKLSAEVVCQP 143
           FG+DPCPN+ K+L+ E VC P
Sbjct: 828 FGKDPCPNVLKRLTVEAVCAP 846

[Close]

BLAST of PI0002332.1 vs. TAIR 10
Match: AT3G13750.1 (beta galactosidase 1 )

HSP 1 Score: 142.1 bits (357), Expect = 3.5e-34
Identity = 65/139 (46.76%), Postives = 93/139 (66.91%), Query Frame = 0


Query: 2   PTKNLIVVFEEVSGNPSRISLVKRSVTSICTEASQYRPVIKNVHMHQNHGELNEQNVLKI 61
           P+ NL+VVFEE  G+P+ I+LV+R V S+C +  +++  + N  +H + G++N+    K 
Sbjct: 709 PSGNLLVVFEEWGGDPNGITLVRREVDSVCADIYEWQSTLVNYQLHAS-GKVNKPLHPKA 768

Query: 62  NLHCAAGQFISAIKFASFGTPSGACGSHEQGTCHSPKSDSVLQKLCVGRRRCSATIPTSI 121
           +L C  GQ I+ +KFASFGTP G CGS+ QG+CH+  S     KLCVG+  CS T+   +
Sbjct: 769 HLQCGPGQKITTVKFASFGTPEGTCGSYRQGSCHAHHSYDAFNKLCVGQNWCSVTVAPEM 828

Query: 122 FGEDPCPNLWKKLSAEVVC 141
           FG DPCPN+ KKL+ E VC
Sbjct: 829 FGGDPCPNVMKKLAVEAVC 846

[Close]

BLAST of PI0002332.1 vs. TAIR 10
Match: AT1G77410.1 (beta-galactosidase 16 )

HSP 1 Score: 104.0 bits (258), Expect = 1.0e-22
Identity = 58/147 (39.46%), Postives = 80/147 (54.42%), Query Frame = 0


Query: 2   PTKNLIVVFEEV-SGNPSRISLVKRSVTSICTEASQYRPVIKNVHMHQNHGELNEQNVL- 61
           P  NL+V+ EE   GNP  I++   SVT +C   S   P   +  +      LN +N+  
Sbjct: 671 PNSNLLVILEEEREGNPLGITIDTVSVTEVCGHVSNTNP---HPVISPRKKGLNRKNLTY 730

Query: 62  ------KINLHCAAGQFISAIKFASFGTPSGACGSHEQGTCHSPKSDSVLQKLCVGRRRC 121
                 K+ L C  G+ IS I FASFGTP+G+CGS+  G+CHSP S +V+QK C+ + RC
Sbjct: 731 RYDRKPKVQLQCPTGRKISKILFASFGTPNGSCGSYSIGSCHSPNSLAVVQKACLKKSRC 790

Query: 122 SATIPTSIFGEDPCPNLWKKLSAEVVC 141
           S  + +  FG D CP+  K L     C
Sbjct: 791 SVPVWSKTFGGDSCPHTVKSLLVRAQC 814

[Close]

BLAST of PI0002332.1 vs. TAIR 10
Match: AT2G28470.1 (beta-galactosidase 8 )

HSP 1 Score: 101.7 bits (252), Expect = 5.2e-22
Identity = 56/143 (39.16%), Postives = 89/143 (62.24%), Query Frame = 0


Query: 2   PTKNLIVVFEEVSGNPSRISL-VKRSVTSICTEASQYRPVIKNVHMHQNHGELNEQNVLK 61
           P+ N++V+FEE+ G+P++IS   K++ +++C   SQ  P    V    +  +++ +N  +
Sbjct: 712 PSGNILVLFEEMGGDPTQISFATKQTGSNLCLTVSQSHP--PPVDTWTSDSKISNRNRTR 771

Query: 62  --INLHC-AAGQFISAIKFASFGTPSGACGSHEQGTCHSPKSDSVLQKLCVGRRRCSATI 121
             ++L C  + Q I +IKFASFGTP G CGS  QG C+S +S S++QK C+G R C+  +
Sbjct: 772 PVLSLKCPISTQVIFSIKFASFGTPKGTCGSFTQGHCNSSRSLSLVQKACIGLRSCNVEV 831

Query: 122 PTSIFGEDPCPNLWKKLSAEVVC 141
            T +FGE PC  + K L+ E  C
Sbjct: 832 STRVFGE-PCRGVVKSLAVEASC 851

The following BLAST results are available for this feature:

BLAST of PI0002332.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SCV9	4.5e-39	51.77	Beta-galactosidase 3 OS=Arabidopsis thaliana OX=3702 GN=BGAL3 PE=2 SV=1	[more]
Q10RB4	1.2e-36	51.75	Beta-galactosidase 5 OS=Oryza sativa subsp. japonica OX=39947 GN=Os03g0165400 PE...	[more]
Q9SCW1	4.9e-33	46.76	Beta-galactosidase 1 OS=Arabidopsis thaliana OX=3702 GN=BGAL1 PE=2 SV=1	[more]
Q8W0A1	1.2e-31	45.32	Beta-galactosidase 2 OS=Oryza sativa subsp. japonica OX=39947 GN=Os01g0580200 PE...	[more]
P48980	1.3e-30	46.76	Beta-galactosidase OS=Solanum lycopersicum OX=4081 PE=1 SV=1	[more]

BLAST of PI0002332.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7TU13	1.0e-73	95.86	Beta-galactosidase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold243G0...	[more]
A0A1S3CDQ7	1.0e-73	95.86	Beta-galactosidase OS=Cucumis melo OX=3656 GN=LOC103499709 PE=3 SV=1	[more]
A0A0A0LL95	5.0e-73	95.17	Beta-galactosidase OS=Cucumis sativus OX=3659 GN=Csa_2G249880 PE=3 SV=1	[more]
A0A5D3BU41	5.3e-67	94.78	Beta-galactosidase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold280G0...	[more]
A0A6J1CYF4	1.0e-62	82.64	Beta-galactosidase OS=Momordica charantia OX=3673 GN=LOC111015426 PE=3 SV=1	[more]

BLAST of PI0002332.1 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0045616.1	2.1e-73	95.86	beta-galactosidase 5-like [Cucumis melo var. makuwa]	[more]
XP_008460995.1	2.1e-73	95.86	PREDICTED: beta-galactosidase 5-like [Cucumis melo]	[more]
XP_004150073.1	1.0e-72	95.17	beta-galactosidase 5 [Cucumis sativus] >KGN61834.1 hypothetical protein Csa_0061...	[more]
XP_038901907.1	3.8e-67	87.59	beta-galactosidase 3-like [Benincasa hispida]	[more]
TYK02640.1	1.1e-66	94.78	beta-galactosidase 5-like [Cucumis melo var. makuwa]	[more]

BLAST of PI0002332.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G36360.1	3.2e-40	51.77	beta-galactosidase 3	[more]
AT4G36360.2	4.7e-39	51.77	beta-galactosidase 3	[more]
AT3G13750.1	3.5e-34	46.76	beta galactosidase 1	[more]
AT1G77410.1	1.0e-22	39.46	beta-galactosidase 16	[more]
AT2G28470.1	5.2e-22	39.16	beta-galactosidase 8	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000922	D-galactoside/L-rhamnose binding SUEL lectin domain	PFAM	PF02140	Gal_Lectin	coord: 63..140 e-value: 1.5E-17 score: 63.7
IPR000922	D-galactoside/L-rhamnose binding SUEL lectin domain	PROSITE	PS50228	SUEL_LECTIN	coord: 60..141 score: 16.546814
IPR043159	D-galactoside/L-rhamnose binding SUEL lectin domain superfamily	GENE3D	2.60.120.740		coord: 41..144 e-value: 1.5E-14 score: 56.1
None	No IPR available	PANTHER	PTHR23421:SF79	BETA-GALACTOSIDASE 3	coord: 2..134
IPR001944	Glycoside hydrolase, family 35	PANTHER	PTHR23421	BETA-GALACTOSIDASE RELATED	coord: 2..134

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
PI0002332	PI0002332	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
PI0002332.1-exon	PI0002332.1-exon-chr11:27802133..27802447	exon
PI0002332.1-exon	PI0002332.1-exon-chr11:27802571..27802693	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
PI0002332.1-cds	PI0002332.1-cds-chr11:27802133..27802447	CDS
PI0002332.1-cds	PI0002332.1-cds-chr11:27802571..27802693	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
PI0002332.1	PI0002332.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0005975	carbohydrate metabolic process
cellular_component	GO:0048046	apoplast
cellular_component	GO:0005773	vacuole
molecular_function	GO:0030246	carbohydrate binding
molecular_function	GO:0004553	hydrolase activity, hydrolyzing O-glycosyl compounds
molecular_function	GO:0004565	beta-galactosidase activity