PI0002299.1 (mRNA) Melon (PI 482460) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRexonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.TTTTTATTTTGTGGGTCTTCACCCTTTCACATGATCATAATCATTTCCAAACCATCAATTATTCCCTTTCTTCAAAATGAGTGGTGCAATGGGACTATCCAAGTCTAGCATTTTGGTGCTTTGGCTTTCGGTTTTAGTCGTTTGTGTTACCTCTTTCGCGGGTGCTCGAAAGACGTTGTTTTTGGGTCACAACGGTGTTAGAGACAACAAAAACAGCTTGACGACTGAACTGGTGGAGATAATCAACAGGTGCAAGTACTCGAAGAACAACGTTAACGACCTCCATTGTTGTGAGTGCTTCCTCTTGAGTTCTAAGAAGATGATGATGATCAATAATAATAATGACACCAATTTTGAAGAGAAAAGGGTTGTTCCTACTGGCCCTAACCCACTTCACAATAAGTAG TTTTTATTTTGTGGGTCTTCACCCTTTCACATGATCATAATCATTTCCAAACCATCAATTATTCCCTTTCTTCAAAATGAGTGGTGCAATGGGACTATCCAAGTCTAGCATTTTGGTGCTTTGGCTTTCGGTTTTAGTCGTTTGTGTTACCTCTTTCGCGGGTGCTCGAAAGACGTTGTTTTTGGGTCACAACGGTGTTAGAGACAACAAAAACAGCTTGACGACTGAACTGGTGGAGATAATCAACAGGTGCAAGTACTCGAAGAACAACGTTAACGACCTCCATTGTTGTGAGTGCTTCCTCTTGAGTTCTAAGAAGATGATGATGATCAATAATAATAATGACACCAATTTTGAAGAGAAAAGGGTTGTTCCTACTGGCCCTAACCCACTTCACAATAAGTAG ATGAGTGGTGCAATGGGACTATCCAAGTCTAGCATTTTGGTGCTTTGGCTTTCGGTTTTAGTCGTTTGTGTTACCTCTTTCGCGGGTGCTCGAAAGACGTTGTTTTTGGGTCACAACGGTGTTAGAGACAACAAAAACAGCTTGACGACTGAACTGGTGGAGATAATCAACAGGTGCAAGTACTCGAAGAACAACGTTAACGACCTCCATTGTTGTGAGTGCTTCCTCTTGAGTTCTAAGAAGATGATGATGATCAATAATAATAATGACACCAATTTTGAAGAGAAAAGGGTTGTTCCTACTGGCCCTAACCCACTTCACAATAAGTAG MSGAMGLSKSSILVLWLSVLVVCVTSFAGARKTLFLGHNGVRDNKNSLTTELVEIINRCKYSKNNVNDLHCCECFLLSSKKMMMINNNNDTNFEEKRVVPTGPNPLHNK Homology
BLAST of PI0002299.1 vs. ExPASy TrEMBL
Match: A0A0A0LXI1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G433060 PE=4 SV=1) HSP 1 Score: 189.9 bits (481), Expect = 5.6e-45 Identity = 98/110 (89.09%), Postives = 100/110 (90.91%), Query Frame = 0
BLAST of PI0002299.1 vs. ExPASy TrEMBL
Match: A0A5A7UXE2 (Clavata3/ESR (CLE) gene family member OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold629G002000 PE=4 SV=1) HSP 1 Score: 186.8 bits (473), Expect = 4.8e-44 Identity = 97/110 (88.18%), Postives = 98/110 (89.09%), Query Frame = 0
BLAST of PI0002299.1 vs. ExPASy TrEMBL
Match: A0A6J1KNU3 (putative receptor-like protein kinase At4g00960 OS=Cucurbita maxima OX=3661 GN=LOC111497330 PE=4 SV=1) HSP 1 Score: 62.0 bits (149), Expect = 1.8e-06 Identity = 45/90 (50.00%), Postives = 55/90 (61.11%), Query Frame = 0
BLAST of PI0002299.1 vs. ExPASy TrEMBL
Match: G7JT84 (Clavata3/ESR (CLE) gene family member OS=Medicago truncatula OX=3880 GN=MTR_4g126940 PE=4 SV=1) HSP 1 Score: 53.5 bits (127), Expect = 6.3e-04 Identity = 30/89 (33.71%), Postives = 48/89 (53.93%), Query Frame = 0
BLAST of PI0002299.1 vs. ExPASy TrEMBL
Match: A0A396IGH6 (Uncharacterized protein OS=Medicago truncatula OX=3880 GN=MtrunA17_Chr4g0071381 PE=4 SV=1) HSP 1 Score: 53.5 bits (127), Expect = 6.3e-04 Identity = 30/89 (33.71%), Postives = 48/89 (53.93%), Query Frame = 0
BLAST of PI0002299.1 vs. NCBI nr
Match: KGN65507.1 (hypothetical protein Csa_019832 [Cucumis sativus]) HSP 1 Score: 189.9 bits (481), Expect = 1.2e-44 Identity = 98/110 (89.09%), Postives = 100/110 (90.91%), Query Frame = 0
BLAST of PI0002299.1 vs. NCBI nr
Match: KAA0058189.1 (Clavata3/ESR (CLE) protein [Cucumis melo var. makuwa] >TYK28553.1 Clavata3/ESR (CLE) gene family member [Cucumis melo var. makuwa]) HSP 1 Score: 186.8 bits (473), Expect = 9.9e-44 Identity = 97/110 (88.18%), Postives = 98/110 (89.09%), Query Frame = 0
BLAST of PI0002299.1 vs. NCBI nr
Match: KAG6587715.1 (hypothetical protein SDJN03_16280, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 95.1 bits (235), Expect = 3.9e-16 Identity = 61/105 (58.10%), Postives = 71/105 (67.62%), Query Frame = 0
BLAST of PI0002299.1 vs. NCBI nr
Match: XP_023003872.1 (putative receptor-like protein kinase At4g00960 [Cucurbita maxima]) HSP 1 Score: 62.0 bits (149), Expect = 3.7e-06 Identity = 45/90 (50.00%), Postives = 55/90 (61.11%), Query Frame = 0
The following BLAST results are available for this feature:
Relationships
This mRNA is a part of the following gene feature(s):
The following five_prime_UTR feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
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