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Sequences
The following sequences are available for this feature:
Gene sequence (with intron) Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. ATGGAGGAAATGGTTAGGCAAACTATAAACAACCATTTTTATGATACAGAGGTCAAAGGTCCAAGCAAACAACCATTAGGAATACAGAAGGATCATTTATACAGCATATAGCTCAACTCTGCTTTCTGTAAGCTATCTACATACCGGTGCTCGAACTTCAATATCTACAGCTACAAATCTATCTGTAAACTTGAAATCAGATTAG mRNA sequence ATGGAGGAAATGGTTAGGCAAACTATAAACAACCATTTTTATGATACAGAGGTCAAAGCATATAGCTCAACTCTGCTTTCTGTAAGCTATCTACATACCGGTGCTCGAACTTCAATATCTACAGCTACAAATCTATCTGTAAACTTGAAATCAGATTAG Coding sequence (CDS) ATGGAGGAAATGGTTAGGCAAACTATAAACAACCATTTTTATGATACAGAGGTCAAAGCATATAGCTCAACTCTGCTTTCTGTAAGCTATCTACATACCGGTGCTCGAACTTCAATATCTACAGCTACAAATCTATCTGTAAACTTGAAATCAGATTAG Protein sequence MEEMVRQTINNHFYDTEVKAYSSTLLSVSYLHTGARTSISTATNLSVNLKSD
Homology
BLAST of PI0001434.1 vs. ExPASy TrEMBL
Match: A0A0A0K6J4 (Homoserine kinase OS=Cucumis sativus OX=3659 GN=Csa_7G073580 PE=4 SV=1) HSP 1 Score: 79.3 bits (194), Expect = 5.1e-12 Identity = 46/67 (68.66%), Postives = 49/67 (73.13%), Query Frame = 0
Query: 1 MEEMVRQTINNHFYDTEVK---------------AYSSTLLSVSYLHTGARTSISTATNL 53
+EEMVRQTINNHF DTEVK YSSTLLSVSYLHTG RTS+STATNL
Sbjct: 23 IEEMVRQTINNHFDDTEVKDPSKQPLEYRRIIYTTYSSTLLSVSYLHTGTRTSLSTATNL 82
BLAST of PI0001434.1 vs. NCBI nr
Match: KGN43922.1 (hypothetical protein Csa_017223 [Cucumis sativus]) HSP 1 Score: 79.3 bits (194), Expect = 1.1e-11 Identity = 46/67 (68.66%), Postives = 49/67 (73.13%), Query Frame = 0
Query: 1 MEEMVRQTINNHFYDTEVK---------------AYSSTLLSVSYLHTGARTSISTATNL 53
+EEMVRQTINNHF DTEVK YSSTLLSVSYLHTG RTS+STATNL
Sbjct: 23 IEEMVRQTINNHFDDTEVKDPSKQPLEYRRIIYTTYSSTLLSVSYLHTGTRTSLSTATNL 82
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
|---|
| Match Name | E-value | Identity | Description | |
|---|
| A0A0A0K6J4 | 5.1e-12 | 68.66 | Homoserine kinase OS=Cucumis sativus OX=3659 GN=Csa_7G073580 PE=4 SV=1 | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| KGN43922.1 | 1.1e-11 | 68.66 | hypothetical protein Csa_017223 [Cucumis sativus] | [more] |
| Match Name | E-value | Identity | Description | |
|---|
Relationships
This mRNA is a part of the following gene feature(s):
| Feature Name | Unique Name | Type |
|---|
| PI0001434 | PI0001434 | gene |
The following exon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Type |
|---|
| PI0001434.1-exon | PI0001434.1-exon-chr01:530705..530762 | exon |
| PI0001434.1-exon | PI0001434.1-exon-chr01:530809..530909 | exon |
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Type |
|---|
| PI0001434.1-cds | PI0001434.1-cds-chr01:530705..530762 | CDS |
| PI0001434.1-cds | PI0001434.1-cds-chr01:530809..530909 | CDS |
The following polypeptide feature(s) derives from this mRNA:
| Feature Name | Unique Name | Type |
|---|
| PI0001434.1 | PI0001434.1-protein | polypeptide |
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