PI0000164.1 (mRNA) Melon (PI 482460) v1

Overview


Name	PI0000164.1
Type	mRNA
Organism	Cucumis metuliferus (Melon (PI 482460) v1)
Description	Unknown protein
Location	chr08: 6550770 .. 6551314 (-)
Sequence length	444
RNA-Seq Expression	PI0000164.1
Synteny	PI0000164.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCATCACAATATTGCCCTAGGTCCAAAACGCATAGCGCAACATTGCCACACCAATGCTGTAACGCCGCAAAATTTTGGAATTTTTTTAGGTAATTTGAGTTTTTGGGAGTTAATAATATAATATAATAATAATAATAGTTTTATTATTATTATTAATATTATTATATTTATTATTATTTATTTTTTTAAGAAAACTAAAAGGAAAAAGAAGGCAGCCCCCCCTTCTTCTTCTTCACGCCGTAAAGCCTCCCCCCTCACTTTTTCTTTCTTACTTCCAGCCGCCCAGTCCAGCACCCCAGCCGGTCGCCCGTCCTGCCGCCACCCAGTCCCCACCGCCAGCACGTCGCCAGTCGTCGTCCAGTCTCGTCGCCAGTCTGTGCAAGGAGCTCTATCTCGCTCCGCCAGCTCGCGGATCTACCGTCGTTCGTCCTGCCGCCGCCCAACTTGCCGCCGTCCGCGCCGCCCTCATCCTTCCAGCCACAATCTTGACATTTTTGGTGAGTTTCACTCCGATTTTCTTTCGATTTAGAACTCCCTTGTAG

mRNA sequence

ATGGCATCACAATATTGCCCTAGGTCCAAAACGCATAGCGCAACATTGCCACACCAATGCTGTAACGCCGCAAAATTTTGGAATTTTTTTAGAAAACTAAAAGGAAAAAGAAGGCAGCCCCCCCTTCTTCTTCTTCACGCCGTAAAGCCTCCCCCCTCACTTTTTCTTTCTTACTTCCAGCCGCCCAGTCCAGCACCCCAGCCGGTCGCCCGTCCTGCCGCCACCCAGTCCCCACCGCCAGCACGTCGCCAGTCGTCGTCCAGTCTCGTCGCCAGTCTGTGCAAGGAGCTCTATCTCGCTCCGCCAGCTCGCGGATCTACCGTCGTTCGTCCTGCCGCCGCCCAACTTGCCGCCGTCCGCGCCGCCCTCATCCTTCCAGCCACAATCTTGACATTTTTGGTGAGTTTCACTCCGATTTTCTTTCGATTTAGAACTCCCTTGTAG

Coding sequence (CDS)

ATGGCATCACAATATTGCCCTAGGTCCAAAACGCATAGCGCAACATTGCCACACCAATGCTGTAACGCCGCAAAATTTTGGAATTTTTTTAGAAAACTAAAAGGAAAAAGAAGGCAGCCCCCCCTTCTTCTTCTTCACGCCGTAAAGCCTCCCCCCTCACTTTTTCTTTCTTACTTCCAGCCGCCCAGTCCAGCACCCCAGCCGGTCGCCCGTCCTGCCGCCACCCAGTCCCCACCGCCAGCACGTCGCCAGTCGTCGTCCAGTCTCGTCGCCAGTCTGTGCAAGGAGCTCTATCTCGCTCCGCCAGCTCGCGGATCTACCGTCGTTCGTCCTGCCGCCGCCCAACTTGCCGCCGTCCGCGCCGCCCTCATCCTTCCAGCCACAATCTTGACATTTTTGGTGAGTTTCACTCCGATTTTCTTTCGATTTAGAACTCCCTTGTAG

Protein sequence

MASQYCPRSKTHSATLPHQCCNAAKFWNFFRKLKGKRRQPPLLLLHAVKPPPSLFLSYFQPPSPAPQPVARPAATQSPPPARRQSSSSLVASLCKELYLAPPARGSTVVRPAAAQLAAVRAALILPATILTFLVSFTPIFFRFRTPL

Homology

The following BLAST results are available for this feature:

BLAST of PI0000164.1 vs.


Match Name	E-value	Identity	Description

BLAST of PI0000164.1 vs.


Match Name	E-value	Identity	Description

BLAST of PI0000164.1 vs.


Match Name	E-value	Identity	Description

BLAST of PI0000164.1 vs.


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 60..75
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 60..88

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
PI0000164	PI0000164	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
PI0000164.1-exon	PI0000164.1-exon-chr08:6550770..6551121	exon
PI0000164.1-exon	PI0000164.1-exon-chr08:6551223..6551314	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
PI0000164.1-cds	PI0000164.1-cds-chr08:6550770..6551121	CDS
PI0000164.1-cds	PI0000164.1-cds-chr08:6551223..6551314	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
PI0000164.1	PI0000164.1-protein	polypeptide