Moc11g31290.1 (mRNA) Bitter gourd (OHB3-1) v2

Overview
NameMoc11g31290.1
TypemRNA
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionUnknown protein
Locationchr11: 22857087 .. 22859799 (-)
Sequence length1194
RNA-Seq ExpressionMoc11g31290.1
SyntenyMoc11g31290.1
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAGAAGCTACTAGGGGGAATAGAAGGGAAGTAAAACGACAGTCGAAAGAGAAACACAACAGAGTCTTACATTGAAAGAAAATTCTCATTACAGAATTACGAAAAGTGGGGGAAGGCAGAGGTTTGGTGTACTGCTTCATGATGGAGGAGCAGAAATATAAAACAAAAGTTACTGCTTCATGATGGGAAAACCCTCAGAGATGAAGCACTGAAGGTGCTCGTCGAAGGAACGACTACTCGAAGTAGTACAAAGATGCTCGAAGGCGTCGAGGGCACGCTGAAGATCCTCATCCGAGTACCTACCCTACAGCCGAACCAGCACGAAATCAACCCCCACCTGCTAAATTTCCCTTTTCAGCCAGCGAAAAGTAGAAGAGCCAGAAAAGTGGGATTCCAGAAGCTCTGAATCCTCAAGCACTGCCCAAGACGACCGCAGTCTTCCTAGACCTGACCAAAGGAGCTCTCGACGGTTACGAGAGCAGTGGCGTGCTCAGATTGCAGCTCCTCCAACGCAGTCTCAAGTCTAGCAGCCCGAGCAGATTATTGGCCCAAGGAGTCTAAGGTCGTGCCCTCGGCTTCTTTGGACTTCACGAGGTCAGGCTCCGGTAGAGCGTTCCCTTCCTCTGCCTTAAGAAGTTTATCATCAGCCTCCGAGAGACGCTACTCCAGTTCCGCAATCCTGGCATCGCGAGATAGTGCTTCGGCTTGGGCCACCTCCAAGTCTCCTTCGAGTCCACGAACGTGGGATCCTACCTCAGCAATCCTAGCTTCACGAGATAATACTTCAGCTCGGCCGTATCCAAGTCCTTTTAGAGTCTGTTGGTGCGGGACTCTGCTATGGCAACTTCACATTAAACACGATCCAACTCGATGTGAATTAGGGTTGCTCTCTTCTCTGACTTTAAAGAATCCTCTCTAGCACTTACCCTTTCTACCCGGAGCCGCTGATAACTCTCCAAAAAAGAGATATTTTGATAAATAATTGGGTTAATTCATGCTTTAATGTGAGGATCTTTATCTATGAAGCATGCTAAAGTGAGGAATTGAGCGGAAAATTTTATTATCATATGTTAAATCCTCATGGTGCTGAATTTATGCAAGTTCCTGCTTATTTCCCCTATTCTGGATTTAATTATGCAGAATCTAGAAAGGTTGCTGAGGAGCAACAGAATTGCGGGAGCATCGCTTGTTGCAGAAATTCCTAGGCAGCACCGTAACACGCAGGATTTTCACTTATGTCTGTACAACGACATGTTTTACTAAGTTTTGCCCTAATTTTCGAAGAGGCTATAAAAGCCAAGATAAGGGTTGTCTCACCATCATTCCTCAAGGGGGAATCTGTCCTAAGAGAGAAAATACTTCAAATATGGTGCTGAAGTTGAGGAGAGCAGACCCATTTCGAGGAAGAGCAGACGACGGGGAGGAGCTGCTTCTGGACCTTGCTTGCTAGTGGTCTCCATCTACGTTTTTCTCTCTTTCTCTAGATTGAGTTGTATTTTTTCTTTACCCATTTTTTTCCCTTCCCCCATGAACTAAAACCCATTTTGGGGGAGATTTATATGTTGTAACTATTGAACAACGAACACACTAGCTGTTTTCTTCTTACTATTTAATGGAGCTGTGTGTATTTTCCTTCATCTTACTAAACATTGTTGGCCACCTTGTTTAGTATGCTAGCTTCTGTATGACCCGGAAGGACTTATGGTTAGTTGACTTGCTTTATTTGTGTTTAGCTACTTTTTCTAGTAGGTTCGTGGATACTCAGGAATGGGATCACTTAATCATGCTTAGAACTCGTTTTCATTGCTTGGGTATTTAGCAACGGGAGTTGTGGGTATCTATGTTTGGGTGTCTCGGAAGGGAACCATGTCGAGTTGAGCAATAACAGGCGATTACATGCTAGAGTAGAGGTCAGGATTTACTGAAAGCATAATAAGTCTCCCTCGTTTCGCCGCATATGTTAATCCTTCATTCGTTCTGTGCTAAAACATTTCTTTGCCACAACATATTTTATTACAATATTTTTCTCTTGGATTTCATTTATGCATTTTTATAGCATTTTACTTAGTTTAGTTTTACAACCACTTATTATCTTTGGTTTGCATTTTTGGTATCCTTGAATGCATGCTTAAAGTAACATCCTTAGTCCCTGTGGATTCGACCTTGTTCGTACTACAATCGACGAGTATAGTGTACACTTGCACTTGCATTCATCACAGTGTGAGAATGCAACAGCCGCTCAACTTCAGCATGCATTACAGTAGAGTGGCTAGGCTTCCTCATTTGGTCGCGAAGGCGTTATAGTTCGGCCTGTCGGTCCTACTTCTGCAGCCTTCAAGCTTCCAGCTCATCCTGAAAGGCCAACGATAGGGCATGGAAACTCTCAACTAGTAGAAAAGACAACCCGAGAAGGCAACAGGTCCAAACCAAAAAAGAGTCGAGGAAGACAAAGAGGAATGAAACTCACCATGAACACCTTGAAAGCCTCGTCTAGACACTCGTTTCACATACTAAAGGTACTTAGGACTTGTCTATGGATGAAGAGTCACCTAGCCATGACCTCAATAAACTCTTGTACATCCCCCATTAAACATTAGGGATTGACGGGAGAAGGTTCGGTGGGAAGGTTGAAGCAGGAGTGGAAGGCATCCACACATGGCCCCTCCAATCACGGAAACGACGCGTTAGACTATGAAGCCTCCACAGCGTGA

mRNA sequence

ATGGAGAAGCTACTAGGGGGAATAGAAGGGAAAAATATAAAACAAAAGTTACTGCTTCATGATGGGAAAACCCTCAGAGATGAAGCACTGAAGGTGCTCGTCGAAGGAACGACTACTCGAAGTAGTACAAAGATGCTCGAAGGCGTCGAGGGCACGCTGAAGATCCTCATCCGAAAGAGCCAGAAAAGTGGGATTCCAGAAGCTCTGAATCCTCAAGCACTGCCCAAGACGACCGCAGTCTTCCTAGACCTGACCAAAGGAGCTCTCGACGGTTACGAGAGCAGTGGCGTGCTCAGATTGCAGCTCCTCCAACGCAGCTCCGGTAGAGCGTTCCCTTCCTCTGCCTTAAGAAGTTTATCATCAGCCTCCGAGAGACGCTACTCCAGTTCCGCAATCCTGGCATCGCGAGATAGTGCTTCGGCTTGGGCCACCTCCAAGTCTCCTTCGAGTCCACGAACGTGGGATCCTACCTCAGCAATCCTAGCTTCACGAGATAATACTTCAGCTCGGCCGTATCCAAGTCCTTTTAGAAATCTAGAAAGGTTGCTGAGGAGCAACAGAATTGCGGGAGCATCGCTTGTTGCAGAAATTCCTAGGCAGCACCGTAACACGCAGGATTTTCACTTATGGGGAATCTGTCCTAAGAGAGAAAATACTTCAAATATGGTGCTGAAGTTGAGGAGAGCAGACCCATTTCGAGGAAGAGCAGACGACGGGGAGGAGCTGCTTCTGGACCTTGCTTGCTACAACGGGAGTTGTGGGTATCTATGTTTGGGTGTCTCGGAAGGGAACCATGTCGAGTTGAGCAATAACAGGCGATTACATGCTAGAGTAGAGGCTTCCTCATTTGGTCGCGAAGGCGTTATAGTTCGGCCTGTCGGTCCTACTTCTGCAGCCTTCAAGCTTCCAGCTCATCCTGAAAGGCCAACGATAGGGCATGGAAACTCTCAACTAGTAGAAAAGACAACCCGAGAAGGCAACAGGTCCAAACCAAAAAAGAGTCGAGGAAGACAAAGAGGAATGAAACTCACCATGAACACCTTGAAAGCCTCGTCTAGACACTCGTTTCACATACTAAAGGGATTGACGGGAGAAGGTTCGGTGGGAAGGTTGAAGCAGGAGTGGAAGGCATCCACACATGGCCCCTCCAATCACGGAAACGACGCGTTAGACTATGAAGCCTCCACAGCGTGA

Coding sequence (CDS)

ATGGAGAAGCTACTAGGGGGAATAGAAGGGAAAAATATAAAACAAAAGTTACTGCTTCATGATGGGAAAACCCTCAGAGATGAAGCACTGAAGGTGCTCGTCGAAGGAACGACTACTCGAAGTAGTACAAAGATGCTCGAAGGCGTCGAGGGCACGCTGAAGATCCTCATCCGAAAGAGCCAGAAAAGTGGGATTCCAGAAGCTCTGAATCCTCAAGCACTGCCCAAGACGACCGCAGTCTTCCTAGACCTGACCAAAGGAGCTCTCGACGGTTACGAGAGCAGTGGCGTGCTCAGATTGCAGCTCCTCCAACGCAGCTCCGGTAGAGCGTTCCCTTCCTCTGCCTTAAGAAGTTTATCATCAGCCTCCGAGAGACGCTACTCCAGTTCCGCAATCCTGGCATCGCGAGATAGTGCTTCGGCTTGGGCCACCTCCAAGTCTCCTTCGAGTCCACGAACGTGGGATCCTACCTCAGCAATCCTAGCTTCACGAGATAATACTTCAGCTCGGCCGTATCCAAGTCCTTTTAGAAATCTAGAAAGGTTGCTGAGGAGCAACAGAATTGCGGGAGCATCGCTTGTTGCAGAAATTCCTAGGCAGCACCGTAACACGCAGGATTTTCACTTATGGGGAATCTGTCCTAAGAGAGAAAATACTTCAAATATGGTGCTGAAGTTGAGGAGAGCAGACCCATTTCGAGGAAGAGCAGACGACGGGGAGGAGCTGCTTCTGGACCTTGCTTGCTACAACGGGAGTTGTGGGTATCTATGTTTGGGTGTCTCGGAAGGGAACCATGTCGAGTTGAGCAATAACAGGCGATTACATGCTAGAGTAGAGGCTTCCTCATTTGGTCGCGAAGGCGTTATAGTTCGGCCTGTCGGTCCTACTTCTGCAGCCTTCAAGCTTCCAGCTCATCCTGAAAGGCCAACGATAGGGCATGGAAACTCTCAACTAGTAGAAAAGACAACCCGAGAAGGCAACAGGTCCAAACCAAAAAAGAGTCGAGGAAGACAAAGAGGAATGAAACTCACCATGAACACCTTGAAAGCCTCGTCTAGACACTCGTTTCACATACTAAAGGGATTGACGGGAGAAGGTTCGGTGGGAAGGTTGAAGCAGGAGTGGAAGGCATCCACACATGGCCCCTCCAATCACGGAAACGACGCGTTAGACTATGAAGCCTCCACAGCGTGA

Protein sequence

MEKLLGGIEGKNIKQKLLLHDGKTLRDEALKVLVEGTTTRSSTKMLEGVEGTLKILIRKSQKSGIPEALNPQALPKTTAVFLDLTKGALDGYESSGVLRLQLLQRSSGRAFPSSALRSLSSASERRYSSSAILASRDSASAWATSKSPSSPRTWDPTSAILASRDNTSARPYPSPFRNLERLLRSNRIAGASLVAEIPRQHRNTQDFHLWGICPKRENTSNMVLKLRRADPFRGRADDGEELLLDLACYNGSCGYLCLGVSEGNHVELSNNRRLHARVEASSFGREGVIVRPVGPTSAAFKLPAHPERPTIGHGNSQLVEKTTREGNRSKPKKSRGRQRGMKLTMNTLKASSRHSFHILKGLTGEGSVGRLKQEWKASTHGPSNHGNDALDYEASTA
Homology
The following BLAST results are available for this feature:
BLAST of Moc11g31290.1 vs.
Match NameE-valueIdentityDescription
BLAST of Moc11g31290.1 vs.
Match NameE-valueIdentityDescription
BLAST of Moc11g31290.1 vs.
Match NameE-valueIdentityDescription
BLAST of Moc11g31290.1 vs.
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (OHB3-1) v2
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 302..341
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 373..397
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 377..397

Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
Moc11g31290Moc11g31290gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameType
Moc11g31290.1.exon9Moc11g31290.1.exon9exon
Moc11g31290.1.exon8Moc11g31290.1.exon8exon
Moc11g31290.1.exon7Moc11g31290.1.exon7exon
Moc11g31290.1.exon6Moc11g31290.1.exon6exon
Moc11g31290.1.exon5Moc11g31290.1.exon5exon
Moc11g31290.1.exon4Moc11g31290.1.exon4exon
Moc11g31290.1.exon3Moc11g31290.1.exon3exon
Moc11g31290.1.exon2Moc11g31290.1.exon2exon
Moc11g31290.1.exon1Moc11g31290.1.exon1exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
cds.Moc11g31290.1cds.Moc11g31290.1_9CDS
cds.Moc11g31290.1cds.Moc11g31290.1_8CDS
cds.Moc11g31290.1cds.Moc11g31290.1_7CDS
cds.Moc11g31290.1cds.Moc11g31290.1_6CDS
cds.Moc11g31290.1cds.Moc11g31290.1_5CDS
cds.Moc11g31290.1cds.Moc11g31290.1_4CDS
cds.Moc11g31290.1cds.Moc11g31290.1_3CDS
cds.Moc11g31290.1cds.Moc11g31290.1_2CDS
cds.Moc11g31290.1cds.Moc11g31290.1CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
Moc11g31290.1Moc11g31290.1-proteinpolypeptide